CN107988207A - Extracted from complex samples and purify the kit and method of salmonella DNA - Google Patents
Extracted from complex samples and purify the kit and method of salmonella DNA Download PDFInfo
- Publication number
- CN107988207A CN107988207A CN201711431673.2A CN201711431673A CN107988207A CN 107988207 A CN107988207 A CN 107988207A CN 201711431673 A CN201711431673 A CN 201711431673A CN 107988207 A CN107988207 A CN 107988207A
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- CN
- China
- Prior art keywords
- magnetic bead
- salmonella
- dna
- complex samples
- albumen
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 241000607142 Salmonella Species 0.000 title claims abstract description 53
- 238000000034 method Methods 0.000 title claims abstract description 23
- 230000005291 magnetic effect Effects 0.000 claims abstract description 96
- 239000011324 bead Substances 0.000 claims abstract description 77
- 101710099276 Probable metalloendopeptidase Proteins 0.000 claims abstract description 36
- 102000039446 nucleic acids Human genes 0.000 claims abstract description 30
- 108020004707 nucleic acids Proteins 0.000 claims abstract description 30
- 150000007523 nucleic acids Chemical class 0.000 claims abstract description 30
- 239000000243 solution Substances 0.000 claims abstract description 23
- 238000002955 isolation Methods 0.000 claims abstract description 14
- 238000010521 absorption reaction Methods 0.000 claims abstract description 11
- 239000003480 eluent Substances 0.000 claims abstract description 10
- 239000006166 lysate Substances 0.000 claims abstract description 10
- 239000012898 sample dilution Substances 0.000 claims abstract description 9
- 238000004140 cleaning Methods 0.000 claims abstract description 8
- 238000000746 purification Methods 0.000 claims abstract description 8
- 230000008878 coupling Effects 0.000 claims description 28
- 238000010168 coupling process Methods 0.000 claims description 28
- 238000005859 coupling reaction Methods 0.000 claims description 28
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 claims description 18
- 239000006228 supernatant Substances 0.000 claims description 17
- 239000000203 mixture Substances 0.000 claims description 14
- 230000000640 hydroxylating effect Effects 0.000 claims description 12
- 239000007788 liquid Substances 0.000 claims description 10
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 claims description 9
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 claims description 9
- 239000011780 sodium chloride Substances 0.000 claims description 9
- 229920001213 Polysorbate 20 Polymers 0.000 claims description 7
- 235000010486 polyoxyethylene sorbitan monolaurate Nutrition 0.000 claims description 7
- 239000000256 polyoxyethylene sorbitan monolaurate Substances 0.000 claims description 7
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims description 6
- 238000002156 mixing Methods 0.000 claims description 6
- 101710083735 Gene 13 protein Proteins 0.000 claims description 5
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 5
- 238000007865 diluting Methods 0.000 claims description 4
- FRXSZNDVFUDTIR-UHFFFAOYSA-N 6-methoxy-1,2,3,4-tetrahydroquinoline Chemical compound N1CCCC2=CC(OC)=CC=C21 FRXSZNDVFUDTIR-UHFFFAOYSA-N 0.000 claims description 3
- BTBUEUYNUDRHOZ-UHFFFAOYSA-N Borate Chemical compound [O-]B([O-])[O-] BTBUEUYNUDRHOZ-UHFFFAOYSA-N 0.000 claims description 3
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 3
- 239000007836 KH2PO4 Substances 0.000 claims description 3
- 238000006243 chemical reaction Methods 0.000 claims description 3
- 238000005336 cracking Methods 0.000 claims description 3
- UQLDLKMNUJERMK-UHFFFAOYSA-L di(octadecanoyloxy)lead Chemical compound [Pb+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O UQLDLKMNUJERMK-UHFFFAOYSA-L 0.000 claims description 3
- BNIILDVGGAEEIG-UHFFFAOYSA-L disodium hydrogen phosphate Chemical compound [Na+].[Na+].OP([O-])([O-])=O BNIILDVGGAEEIG-UHFFFAOYSA-L 0.000 claims description 3
- 229910000397 disodium phosphate Inorganic materials 0.000 claims description 3
- 229910000402 monopotassium phosphate Inorganic materials 0.000 claims description 3
- 238000002360 preparation method Methods 0.000 claims description 3
- 239000003761 preservation solution Substances 0.000 claims description 3
- 238000005406 washing Methods 0.000 claims description 3
- 102000016943 Muramidase Human genes 0.000 claims description 2
- 108010014251 Muramidase Proteins 0.000 claims description 2
- 108010062010 N-Acetylmuramoyl-L-alanine Amidase Proteins 0.000 claims description 2
- 229960000274 lysozyme Drugs 0.000 claims description 2
- 235000010335 lysozyme Nutrition 0.000 claims description 2
- 239000004325 lysozyme Substances 0.000 claims description 2
- 238000004321 preservation Methods 0.000 claims description 2
- 239000000047 product Substances 0.000 claims 1
- 238000007400 DNA extraction Methods 0.000 abstract description 2
- 239000000284 extract Substances 0.000 abstract description 2
- 230000005298 paramagnetic effect Effects 0.000 abstract description 2
- 239000002245 particle Substances 0.000 abstract description 2
- 230000009870 specific binding Effects 0.000 abstract 1
- 239000003153 chemical reaction reagent Substances 0.000 description 14
- 238000000605 extraction Methods 0.000 description 4
- 238000007885 magnetic separation Methods 0.000 description 4
- 241000701835 Salmonella virus P22 Species 0.000 description 3
- 241001354013 Salmonella enterica subsp. enterica serovar Enteritidis Species 0.000 description 2
- 230000001580 bacterial effect Effects 0.000 description 2
- 238000001962 electrophoresis Methods 0.000 description 2
- 238000005516 engineering process Methods 0.000 description 2
- 235000013305 food Nutrition 0.000 description 2
- 108090000623 proteins and genes Proteins 0.000 description 2
- 102000004169 proteins and genes Human genes 0.000 description 2
- 239000002689 soil Substances 0.000 description 2
- SCYULBFZEHDVBN-UHFFFAOYSA-N 1,1-Dichloroethane Chemical class CC(Cl)Cl SCYULBFZEHDVBN-UHFFFAOYSA-N 0.000 description 1
- 208000031295 Animal disease Diseases 0.000 description 1
- 241000894006 Bacteria Species 0.000 description 1
- 108090000790 Enzymes Proteins 0.000 description 1
- 102000004190 Enzymes Human genes 0.000 description 1
- -1 Ethyl sulfonic acid monohydrate Chemical class 0.000 description 1
- 235000004443 Ricinus communis Nutrition 0.000 description 1
- LEHOTFFKMJEONL-UHFFFAOYSA-N Uric Acid Chemical compound N1C(=O)NC(=O)C2=C1NC(=O)N2 LEHOTFFKMJEONL-UHFFFAOYSA-N 0.000 description 1
- TVWHNULVHGKJHS-UHFFFAOYSA-N Uric acid Natural products N1C(=O)NC(=O)C2NC(=O)NC21 TVWHNULVHGKJHS-UHFFFAOYSA-N 0.000 description 1
- 241000700605 Viruses Species 0.000 description 1
- 230000004913 activation Effects 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 210000004899 c-terminal region Anatomy 0.000 description 1
- 238000005119 centrifugation Methods 0.000 description 1
- 239000003795 chemical substances by application Substances 0.000 description 1
- 229940099352 cholate Drugs 0.000 description 1
- BHQCQFFYRZLCQQ-OELDTZBJSA-N cholic acid Chemical compound C([C@H]1C[C@H]2O)[C@H](O)CC[C@]1(C)[C@@H]1[C@@H]2[C@@H]2CC[C@H]([C@@H](CCC(O)=O)C)[C@@]2(C)[C@@H](O)C1 BHQCQFFYRZLCQQ-OELDTZBJSA-N 0.000 description 1
- 230000007812 deficiency Effects 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 201000010099 disease Diseases 0.000 description 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 1
- 239000002270 dispersing agent Substances 0.000 description 1
- 235000013601 eggs Nutrition 0.000 description 1
- 229940088598 enzyme Drugs 0.000 description 1
- 235000019441 ethanol Nutrition 0.000 description 1
- 150000004676 glycans Chemical class 0.000 description 1
- 238000011534 incubation Methods 0.000 description 1
- 239000003112 inhibitor Substances 0.000 description 1
- 239000003446 ligand Substances 0.000 description 1
- 150000002632 lipids Chemical class 0.000 description 1
- 239000006148 magnetic separator Substances 0.000 description 1
- 244000052769 pathogen Species 0.000 description 1
- 230000001717 pathogenic effect Effects 0.000 description 1
- 229920001282 polysaccharide Polymers 0.000 description 1
- 239000005017 polysaccharide Substances 0.000 description 1
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 238000001179 sorption measurement Methods 0.000 description 1
- 229940116269 uric acid Drugs 0.000 description 1
- 239000002699 waste material Substances 0.000 description 1
- 206010048282 zoonosis Diseases 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1003—Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor
- C12N15/1006—Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor by means of a solid support carrier, e.g. particles, polymers
- C12N15/1013—Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor by means of a solid support carrier, e.g. particles, polymers by using magnetic beads
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- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- Health & Medical Sciences (AREA)
- Biomedical Technology (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Crystallography & Structural Chemistry (AREA)
- Plant Pathology (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Analytical Chemistry (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Peptides Or Proteins (AREA)
Abstract
Description
Claims (10)
- A kind of 1. kit extracted from complex samples and purify salmonella DNA, it is characterised in that including:1)It has been coupled the carboxylated nanometer magnetic bead CPBA-MNPs of gp13 albumen;2)Sample dilution;3)Sample lysate;4)Nucleic acid cleaning solution;5)DNA eluents6)Nucleic acid absorption magnetic bead.
- 2. extracted as claimed in claim 1 from complex samples and purify the kit of salmonella DNA, it is characterised in that step Rapid 1)The preparation method of the middle carboxyl nanometer magnetic bead CPBA-MNPs for being coupled gp13 albumen is:a)Using the salmonella expression system of gp13 albumen, solubility expression gp13 albumen simultaneously purifies;b)Activated hydroxyl groups nanometer magnetic bead:c)Gp13 albumen is coupled with hydroxylating nanometer magnetic bead.
- 3. extracted as claimed in claim 2 from complex samples and purify the kit of salmonella DNA, it is characterised in that step Rapid c)The detailed process that gp13 albumen is coupled with hydroxylating nanometer magnetic bead is:Using the borate solution containing Tween-20 as coupling buffer, hydroxylating nano magnetic is cleaned with the coupling buffer Pearl;The hydroxylating nanometer magnetic bead, gp13 albumen after purification and coupling buffer are mixed, 2-4 is coupled at 20-30 DEG C Hour;Magnetic Isolation removes supernatant, adds PBST solution and magnetic bead, 20-30 DEG C of reaction 30-90min closing magnetic bead surfaces are resuspended Unreacted activated hydroxyl groups group;Magnetic Isolation supernatant, after PBS or preservation solution washing, is placed in and preserves in solution, 4 DEG C of preservations.
- 4. extracted as claimed in claim 3 from complex samples and purify the kit of salmonella DNA, it is characterised in that institute The pH for stating coupling buffer is 7.5-8.5.
- 5. extracted as claimed in claim 1 from complex samples and purify the kit of salmonella DNA, it is characterised in that institute The composition for stating Sample dilution is:The composition of the Sample dilution is:NaCl 137mM, KCl 2.7mM, Na2HPO4 4.3mM, KH2PO41.4mM, 0.05%Tween-20;The composition of the sample lysate is:NaCl 0.05mM, EDTA 5mM, the Tris-HCl 20mM of PH=7.5, lysozyme 3mg/ml.
- 6. extracted as claimed in claim 1 from complex samples and purify the kit of salmonella DNA, it is characterised in that institute The composition for stating nucleic acid cleaning solution is:NaCl 0.05mM, EDTA 0.05mM, the Tris-HCl 20mM of PH=7.5, anhydrous second Alcohol 70%.
- 7. extracted as claimed in claim 1 from complex samples and purify the kit of salmonella DNA, it is characterised in that institute The composition for stating DNA eluents is:EDTA 5mM, the Tris-HCl 10mM of PH=8.8.
- 8. the method extracted from complex samples using kit described in claim 1 and purified salmonella DNA, its feature exist In, including step:1)Complex samples are taken, add the sample diluting liquid, after mixing, centrifuging and taking supernatant;2)Add the carboxylated nanometer magnetic bead CPBA-MNPs for being coupled gp13 albumen, shaken cultivation 10- at 36.5-37.5 DEG C 20min;3)Magnetic Isolation combines the magnetic bead of salmonella, removes liquid, and the magnetic bead magnetic bead for combining salmonella uses sample Dilution cleans;4)Sample lysate is added into the magnetic bead for combine salmonella, 15-20min is incubated at 36.5-37.5 DEG C, is cracked Thalline;5)After cracking, it is cooled to room temperature, adds nucleic acid absorption magnetic bead, room temperature mixes;6)The magnetic bead for being adsorbed with nucleic acid is cleaned using nucleic acid cleaning solution;7)DNA eluents are added into the magnetic bead for be adsorbed with nucleic acid, are incubated at 36.5-37.5 DEG C, then Magnetic Isolation, supernatant Preserved at -20 DEG C.
- 9. the method extracted as claimed in claim 8 from complex samples and purify salmonella DNA, it is characterised in that:Step 1)In, 8-10 mL sample diluting liquids are added in 1g complex samples;Step 2)The middle carboxylated nanometer magnetic bead for being coupled gp13 albumen CPBA-MNPs and step 1)The volume ratio of supernatant is 1:0.6-1.5.
- 10. the method extracted as claimed in claim 8 from complex samples and purify salmonella DNA, it is characterised in that:Step 4)In, the volume ratio of the magnetic bead and sample lysate that combine salmonella is 1:3-5;Step 5)In, nucleic acid absorption magnetic bead with The volume ratio for combining the magnetic bead of salmonella is 2.5-3.5:2;Step 7)In, the body of DNA eluents and nucleic acid absorption magnetic bead Product is than being 1:5-7.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
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CN201711431673.2A CN107988207B (en) | 2017-12-26 | 2017-12-26 | Kit and method for extracting and purifying salmonella DNA from complex sample |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201711431673.2A CN107988207B (en) | 2017-12-26 | 2017-12-26 | Kit and method for extracting and purifying salmonella DNA from complex sample |
Publications (2)
Publication Number | Publication Date |
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CN107988207A true CN107988207A (en) | 2018-05-04 |
CN107988207B CN107988207B (en) | 2021-04-06 |
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CN201711431673.2A Active CN107988207B (en) | 2017-12-26 | 2017-12-26 | Kit and method for extracting and purifying salmonella DNA from complex sample |
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Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP2007097551A (en) * | 2005-10-07 | 2007-04-19 | Daikin Ind Ltd | Method for detecting microorganism |
CN101921838A (en) * | 2010-06-11 | 2010-12-22 | 江南大学 | Method for detecting salmonella through PCR-DHPLC |
CN102816850A (en) * | 2012-08-28 | 2012-12-12 | 无锡中德伯尔生物技术有限公司 | Method for simultaneously detecting salmonella typhimurium, escherichia coli O157:H7 and listeria monocytogenesis |
CN104651496A (en) * | 2015-01-19 | 2015-05-27 | 四川大学 | Method for rapidly detecting salmonella based on immunomagnetic bead-multiplex PCR |
CN106093377A (en) * | 2016-08-12 | 2016-11-09 | 江苏福隆生物技术有限公司 | A kind of test kit for the quick coupling of albumen, antibody, enzyme and nucleic acid and preparation method thereof |
-
2017
- 2017-12-26 CN CN201711431673.2A patent/CN107988207B/en active Active
Patent Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP2007097551A (en) * | 2005-10-07 | 2007-04-19 | Daikin Ind Ltd | Method for detecting microorganism |
CN101921838A (en) * | 2010-06-11 | 2010-12-22 | 江南大学 | Method for detecting salmonella through PCR-DHPLC |
CN102816850A (en) * | 2012-08-28 | 2012-12-12 | 无锡中德伯尔生物技术有限公司 | Method for simultaneously detecting salmonella typhimurium, escherichia coli O157:H7 and listeria monocytogenesis |
CN104651496A (en) * | 2015-01-19 | 2015-05-27 | 四川大学 | Method for rapidly detecting salmonella based on immunomagnetic bead-multiplex PCR |
CN106093377A (en) * | 2016-08-12 | 2016-11-09 | 江苏福隆生物技术有限公司 | A kind of test kit for the quick coupling of albumen, antibody, enzyme and nucleic acid and preparation method thereof |
Non-Patent Citations (1)
Title |
---|
左建民等: "表达EHV-1 gC的非致病性痘苗病毒MVA在重组MVA/DNA联合疫苗计划中的应用", 《国外医学》 * |
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Publication number | Publication date |
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CN107988207B (en) | 2021-04-06 |
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Address after: 250000 room 318, 2 building, 19 Huaneng Road, Lixia District, Ji'nan, Shandong. Applicant after: JINAN KAICHEN BIOTEC Co.,Ltd. Address before: 250000 room 318, 2 building, 19 Huaneng Road, Lixia District, Ji'nan, Shandong. Applicant before: JINAN KIAGEN TECHNOLOGY CO.,LTD. |
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Denomination of invention: Kit and method for extracting and purifying Salmonella DNA from complex samples Effective date of registration: 20221104 Granted publication date: 20210406 Pledgee: Jinan Chengxi sub branch of Qilu Bank Co.,Ltd. Pledgor: JINAN KAICHEN BIOTEC Co.,Ltd. Registration number: Y2022980020787 |
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Date of cancellation: 20231109 Granted publication date: 20210406 Pledgee: Jinan Chengxi sub branch of Qilu Bank Co.,Ltd. Pledgor: JINAN KAICHEN BIOTEC Co.,Ltd. Registration number: Y2022980020787 |
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Denomination of invention: A kit and method for extracting and purifying Salmonella DNA from complex samples Effective date of registration: 20231116 Granted publication date: 20210406 Pledgee: Jinan Chengxi sub branch of Qilu Bank Co.,Ltd. Pledgor: JINAN KAICHEN BIOTEC Co.,Ltd. Registration number: Y2023980066113 |