CN106055924B - 微生物操作分类单元确定和序列辅助分离的方法和系统 - Google Patents
微生物操作分类单元确定和序列辅助分离的方法和系统 Download PDFInfo
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- G—PHYSICS
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- G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
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Abstract
Description
克隆ID | 分类 | 序列 |
G03.21 | 细菌界;硬壁菌门;梭菌纲;梭菌目;毛螺菌科;Blautia | SEQ ID NO:1 |
G06.93 | 细菌界;硬壁菌门;Negativicutes;Selenomonadales;韦荣球菌科;Allisonella | SEQ ID NO:2 |
D10.54 | 细菌界;“拟杆菌门”;“拟杆菌纲”;“拟杆菌目”;“Prevotellaceae”;Paraprevotella | SEQ ID NO:3 |
G02.84 | 细菌界;“拟杆菌门”;“拟杆菌纲”;“拟杆菌目”;″紫单胞菌科”;Barnesiella | SEQ ID NO:4 |
C09.54 | 细菌界;硬壁菌门;杆菌纲;乳杆菌目;链球菌科;链球菌属 | SEQ ID NO:5 |
D02.70 | 细菌界;硬壁菌门;梭菌纲;梭菌目;瘤胃球菌科;瘤胃球菌属 | SEQ ID NO:6 |
D02.21 | 细菌界;“放线菌门”;放线菌纲;红蝽菌目;红蝽菌科;Collinsella | SEQ ID NO:7 |
G10.33 | 细菌界;“拟杆菌门”;“拟杆菌纲”;“拟杆菌目”;拟杆菌科;拟杆菌属 | SEQ ID NO:8 |
G03.02 | 细菌界;硬壁菌门;梭菌纲;梭菌目;毛螺菌科;Dorea | SEQ ID NO:9 |
G10.26 | 细菌界;“拟杆菌门”;“拟杆菌纲”;“拟杆菌目”;“理研菌科”;Alistipes | SEQ ID NO:10 |
C10.94 | 细菌界;“拟杆菌门”;“拟杆菌纲”;“拟杆菌目”;“紫单胞菌科”;Butyricimonas | SEQ ID NO:11 |
F08.65 | 细菌界;硬壁菌门;Negativicutes;Selenomonadales;韦荣球菌科;Veillonella | SEQ ID NO:12 |
B14.45 | 细菌界;“变形菌门”;γ变形菌纲;“肠杆菌目”;肠杆菌科;克雷伯杆菌属 | SEQ ID NO:13 |
C08.06 | 细菌界;“变形菌门”;δ变形菌纲;脱硫弧菌目;脱硫弧菌科;脱硫弧菌属 | SEQ ID NO:14 |
F15.08 | 细菌界;硬壁菌门;梭菌纲;梭菌目;毛螺菌科;Anaerostipes | SEQ ID NO:15 |
F12.59 | 细菌界;“变形菌门”;γ变形菌纲;巴斯德氏菌目;巴斯德氏菌科;嗜血杆菌属 | SEQ ID NO:16 |
G02.62 | 细菌界;“变形菌门”;β变形菌纲;伯克氏菌目;萨特氏菌科;萨特氏菌属 | SEQ ID NO:17 |
B2-5 | 细菌界;硬壁菌门;杆菌纲;乳杆菌目;乳杆菌科;乳杆菌属 | SEQ ID NO:18 |
YSQ.78 | 细菌界;“变形菌门”;γ变形菌纲;假单胞菌目;假单胞菌科;假单胞菌属 | SEQ ID NO:19 |
YSQ.40 | 细菌界;“变形菌门”;β变形菌纲;伯克氏菌目;丛毛单胞菌科;食酸菌属 | SEQ ID NO:20 |
YSQ.182 | 细菌界;变形菌门”;β变形菌纲;红环菌目;红环菌科;Thauera | SEQ ID NO:21 |
Ecol | 细菌界;变形菌门;γ变形菌纲;肠杆菌目;肠杆菌科;埃希氏杆菌/志贺氏杆菌属 | SEQ ID NO:22 |
Claims (22)
Priority Applications (6)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201610333530.7A CN106055924B (zh) | 2016-05-19 | 2016-05-19 | 微生物操作分类单元确定和序列辅助分离的方法和系统 |
SG11201810320WA SG11201810320WA (en) | 2016-05-19 | 2017-05-16 | Determination of microorganism operational taxonomic unit and sequence-assisted separation |
MYPI2018001991A MY190643A (en) | 2016-05-19 | 2017-05-16 | Determination of microorganism operational taxonomic unit and sequence-assisted separation |
PCT/CN2017/084474 WO2017198137A1 (zh) | 2016-05-19 | 2017-05-16 | 微生物操作分类单元确定和序列辅助分离 |
TW106116361A TW201741463A (zh) | 2016-05-19 | 2017-05-17 | 微生物操作分類單元確定和序列輔助分離 |
US16/193,768 US11373730B2 (en) | 2016-05-19 | 2018-11-16 | Determination of microorganism operational taxonomic unit and sequence-assisted separation |
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CN201610333530.7A CN106055924B (zh) | 2016-05-19 | 2016-05-19 | 微生物操作分类单元确定和序列辅助分离的方法和系统 |
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CN106055924A CN106055924A (zh) | 2016-10-26 |
CN106055924B true CN106055924B (zh) | 2019-02-01 |
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US (1) | US11373730B2 (zh) |
CN (1) | CN106055924B (zh) |
MY (1) | MY190643A (zh) |
SG (1) | SG11201810320WA (zh) |
TW (1) | TW201741463A (zh) |
WO (1) | WO2017198137A1 (zh) |
Families Citing this family (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN106055924B (zh) | 2016-05-19 | 2019-02-01 | 完美(中国)有限公司 | 微生物操作分类单元确定和序列辅助分离的方法和系统 |
CN109997193B (zh) * | 2016-11-10 | 2023-03-14 | 深圳华大生命科学研究院 | 一种对特定群中的亚群进行定量分析的方法 |
US10787699B2 (en) * | 2017-02-08 | 2020-09-29 | Microsoft Technology Licensing, Llc | Generating pluralities of primer and payload designs for retrieval of stored nucleotides |
CN107463800B (zh) * | 2017-07-19 | 2018-05-11 | 东莞博奥木华基因科技有限公司 | 一种肠道微生物信息分析方法及系统 |
CN109652567B (zh) * | 2017-10-12 | 2022-05-10 | 北京乐土医学检验实验室有限公司 | 一种检测待测样品中微生物的种类和相对含量的方法及其专用引物组合 |
CN108182347B (zh) * | 2018-01-17 | 2022-02-22 | 广东工业大学 | 一种大规模跨平台基因表达数据分类方法 |
CN108388771B (zh) * | 2018-01-24 | 2021-10-08 | 安徽微分基因科技有限公司 | 一种生物多样性自动分析方法 |
WO2021138562A1 (en) * | 2019-12-31 | 2021-07-08 | Assembly Biosciences, Inc. | Compositions comprising bacterial species and methods related thereto |
CN112251503A (zh) * | 2020-03-17 | 2021-01-22 | 南京大学 | 一种基于16S rDNA全长高通量测序检测根际细菌群落的方法 |
GB202007452D0 (en) * | 2020-05-19 | 2020-07-01 | Microbiotica Ltd | Threrapeutic bacterial composition |
CN112226524B (zh) * | 2020-09-09 | 2023-10-27 | 广东省科学院生态环境与土壤研究所 | 判别土壤中参与硝酸盐依赖性锑氧化过程的菌种及其关键功能基因的方法 |
CN113793640B (zh) * | 2021-09-17 | 2024-03-08 | 艾德范思(北京)医学检验实验室有限公司 | 基于二代测序的微生物16s扩增子数据分析的装置及方法 |
CN116612820B (zh) * | 2023-07-20 | 2023-09-19 | 山东省滨州畜牧兽医研究院 | 基于数据分析的乳制品生产智能管理平台 |
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2016
- 2016-05-19 CN CN201610333530.7A patent/CN106055924B/zh active Active
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2017
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- 2017-05-16 WO PCT/CN2017/084474 patent/WO2017198137A1/zh active Application Filing
- 2017-05-16 MY MYPI2018001991A patent/MY190643A/en unknown
- 2017-05-17 TW TW106116361A patent/TW201741463A/zh unknown
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CN106055924A (zh) | 2016-10-26 |
TW201741463A (zh) | 2017-12-01 |
MY190643A (en) | 2022-04-29 |
SG11201810320WA (en) | 2018-12-28 |
US20190194740A1 (en) | 2019-06-27 |
WO2017198137A1 (zh) | 2017-11-23 |
US11373730B2 (en) | 2022-06-28 |
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