CN104513814A - I-TevIN201-Cas9null融合蛋白及其应用 - Google Patents
I-TevIN201-Cas9null融合蛋白及其应用 Download PDFInfo
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- CN104513814A CN104513814A CN201410656386.1A CN201410656386A CN104513814A CN 104513814 A CN104513814 A CN 104513814A CN 201410656386 A CN201410656386 A CN 201410656386A CN 104513814 A CN104513814 A CN 104513814A
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- tevi
- cas9
- null
- fusion rotein
- cas9null
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- 108020001507 fusion proteins Proteins 0.000 title abstract 4
- 102000037865 fusion proteins Human genes 0.000 title abstract 4
- 150000001413 amino acids Chemical class 0.000 claims abstract description 7
- 238000012239 gene modification Methods 0.000 claims abstract description 5
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- 238000007877 drug screening Methods 0.000 claims abstract description 4
- 101000889900 Enterobacteria phage T4 Intron-associated endonuclease 1 Proteins 0.000 claims description 60
- 230000004927 fusion Effects 0.000 claims description 10
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- 102000004190 Enzymes Human genes 0.000 claims description 9
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- HNDVDQJCIGZPNO-UHFFFAOYSA-N histidine Natural products OC(=O)C(N)CC1=CN=CN1 HNDVDQJCIGZPNO-UHFFFAOYSA-N 0.000 claims description 4
- 101710163270 Nuclease Proteins 0.000 claims description 3
- DCXYFEDJOCDNAF-UHFFFAOYSA-N Asparagine Natural products OC(=O)C(N)CC(N)=O DCXYFEDJOCDNAF-UHFFFAOYSA-N 0.000 claims description 2
- DCXYFEDJOCDNAF-REOHCLBHSA-N L-asparagine Chemical compound OC(=O)[C@@H](N)CC(N)=O DCXYFEDJOCDNAF-REOHCLBHSA-N 0.000 claims description 2
- CKLJMWTZIZZHCS-REOHCLBHSA-N L-aspartic acid Chemical compound OC(=O)[C@@H](N)CC(O)=O CKLJMWTZIZZHCS-REOHCLBHSA-N 0.000 claims description 2
- 229960001230 asparagine Drugs 0.000 claims description 2
- 235000009582 asparagine Nutrition 0.000 claims description 2
- 235000003704 aspartic acid Nutrition 0.000 claims description 2
- OQFSQFPPLPISGP-UHFFFAOYSA-N beta-carboxyaspartic acid Natural products OC(=O)C(N)C(C(O)=O)C(O)=O OQFSQFPPLPISGP-UHFFFAOYSA-N 0.000 claims description 2
- 230000003197 catalytic effect Effects 0.000 claims description 2
- 230000000694 effects Effects 0.000 abstract description 18
- 108020005004 Guide RNA Proteins 0.000 abstract description 17
- 238000005520 cutting process Methods 0.000 abstract description 10
- 108090000623 proteins and genes Proteins 0.000 abstract description 6
- 102000004169 proteins and genes Human genes 0.000 abstract description 3
- 238000001415 gene therapy Methods 0.000 abstract description 2
- 238000003776 cleavage reaction Methods 0.000 abstract 1
- 230000009437 off-target effect Effects 0.000 abstract 1
- 230000007017 scission Effects 0.000 abstract 1
- 108091033409 CRISPR Proteins 0.000 description 15
- 210000004027 cell Anatomy 0.000 description 12
- 230000014509 gene expression Effects 0.000 description 10
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 9
- 108020004414 DNA Proteins 0.000 description 8
- 238000006243 chemical reaction Methods 0.000 description 8
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 6
- 238000005516 engineering process Methods 0.000 description 6
- 101150099108 srebf2 gene Proteins 0.000 description 6
- 108091028113 Trans-activating crRNA Proteins 0.000 description 5
- 239000003292 glue Substances 0.000 description 5
- 239000013612 plasmid Substances 0.000 description 5
- 230000003321 amplification Effects 0.000 description 4
- 239000000872 buffer Substances 0.000 description 4
- 239000012634 fragment Substances 0.000 description 4
- 235000011187 glycerol Nutrition 0.000 description 4
- 238000000034 method Methods 0.000 description 4
- 238000003199 nucleic acid amplification method Methods 0.000 description 4
- YQYJSBFKSSDGFO-UHFFFAOYSA-N Epihygromycin Natural products OC1C(O)C(C(=O)C)OC1OC(C(=C1)O)=CC=C1C=C(C)C(=O)NC1C(O)C(O)C2OCOC2C1O YQYJSBFKSSDGFO-UHFFFAOYSA-N 0.000 description 3
- 230000015572 biosynthetic process Effects 0.000 description 3
- 230000004087 circulation Effects 0.000 description 3
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- 239000011780 sodium chloride Substances 0.000 description 3
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 2
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 2
- 241000894006 Bacteria Species 0.000 description 2
- 108010008532 Deoxyribonuclease I Proteins 0.000 description 2
- 102000007260 Deoxyribonuclease I Human genes 0.000 description 2
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 2
- 241000672609 Escherichia coli BL21 Species 0.000 description 2
- TWRXJAOTZQYOKJ-UHFFFAOYSA-L Magnesium chloride Chemical compound [Mg+2].[Cl-].[Cl-] TWRXJAOTZQYOKJ-UHFFFAOYSA-L 0.000 description 2
- 238000012408 PCR amplification Methods 0.000 description 2
- 230000007812 deficiency Effects 0.000 description 2
- 238000003209 gene knockout Methods 0.000 description 2
- 150000002460 imidazoles Chemical class 0.000 description 2
- 230000002779 inactivation Effects 0.000 description 2
- 239000007788 liquid Substances 0.000 description 2
- 239000000047 product Substances 0.000 description 2
- 230000009465 prokaryotic expression Effects 0.000 description 2
- 238000000746 purification Methods 0.000 description 2
- 238000003786 synthesis reaction Methods 0.000 description 2
- JKMHFZQWWAIEOD-UHFFFAOYSA-N 2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid Chemical compound OCC[NH+]1CCN(CCS([O-])(=O)=O)CC1 JKMHFZQWWAIEOD-UHFFFAOYSA-N 0.000 description 1
- FRXSZNDVFUDTIR-UHFFFAOYSA-N 6-methoxy-1,2,3,4-tetrahydroquinoline Chemical compound N1CCCC2=CC(OC)=CC=C21 FRXSZNDVFUDTIR-UHFFFAOYSA-N 0.000 description 1
- 230000004568 DNA-binding Effects 0.000 description 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 1
- 239000007995 HEPES buffer Substances 0.000 description 1
- 101100203921 Mus musculus Srebf2 gene Proteins 0.000 description 1
- 102000035195 Peptidases Human genes 0.000 description 1
- 108091005804 Peptidases Proteins 0.000 description 1
- 238000001042 affinity chromatography Methods 0.000 description 1
- 229910021529 ammonia Inorganic materials 0.000 description 1
- QGZKDVFQNNGYKY-UHFFFAOYSA-N ammonia Natural products N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 1
- 238000004458 analytical method Methods 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
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- 238000005336 cracking Methods 0.000 description 1
- 229960000935 dehydrated alcohol Drugs 0.000 description 1
- 238000011033 desalting Methods 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 230000029087 digestion Effects 0.000 description 1
- 238000001962 electrophoresis Methods 0.000 description 1
- 238000010828 elution Methods 0.000 description 1
- 239000012149 elution buffer Substances 0.000 description 1
- 238000013467 fragmentation Methods 0.000 description 1
- 238000006062 fragmentation reaction Methods 0.000 description 1
- 238000010362 genome editing Methods 0.000 description 1
- 239000012145 high-salt buffer Substances 0.000 description 1
- 230000036039 immunity Effects 0.000 description 1
- 238000000338 in vitro Methods 0.000 description 1
- 238000011534 incubation Methods 0.000 description 1
- 230000006698 induction Effects 0.000 description 1
- 230000000968 intestinal effect Effects 0.000 description 1
- BPHPUYQFMNQIOC-NXRLNHOXSA-N isopropyl beta-D-thiogalactopyranoside Chemical compound CC(C)S[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O BPHPUYQFMNQIOC-NXRLNHOXSA-N 0.000 description 1
- 239000012160 loading buffer Substances 0.000 description 1
- 229910001629 magnesium chloride Inorganic materials 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 239000011259 mixed solution Substances 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 235000019833 protease Nutrition 0.000 description 1
- 238000000197 pyrolysis Methods 0.000 description 1
- 238000012163 sequencing technique Methods 0.000 description 1
- 238000002415 sodium dodecyl sulfate polyacrylamide gel electrophoresis Methods 0.000 description 1
- 239000000243 solution Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 239000006228 supernatant Substances 0.000 description 1
- 238000012360 testing method Methods 0.000 description 1
- 238000013518 transcription Methods 0.000 description 1
- 230000035897 transcription Effects 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases RNAses, DNAses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2319/00—Fusion polypeptide
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- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Biomedical Technology (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Medicinal Chemistry (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Peptides Or Proteins (AREA)
Abstract
Description
5×primerSTAR Buffer | 10 ul |
dNTP (2.5 mM) | 4μl |
TaKaRa Taq HS (5 U/μl) | 0.5ul |
Primer_F1 20pmol (final conc. 0.4 μM) | 1ul |
Primer_ R1 20pmol (final conc. 0.4 μM) | 1ul |
I-TevIN201-Cas9null (20ng/ul) | 1ul |
ddH2O | 32.5 ul |
总计 | 50 ul |
5×primerSTAR Buffer | 10 ul |
dNTP (2.5 mM) | 4μl |
TaKaRa Taq HS (5 U/μl) | 0.5ul |
I-TevIN201-Cas9null _F: NdeI 20pmol | 1ul |
I-TevIN201-Cas9null _R:BamHI 20pmol | 1ul |
I-TevIN201-Cas9null (20ng/ul) | 1ul |
ddH2O | 32.5 ul |
总计 | 50 ul |
10×Taq Buffer | 5 ul |
dNTP (2.5 mM) | 4μl |
TaKaRa Taq (5 U/μl) | 0.5ul |
primer F2 20pmol | 1ul |
Primer R2 20pmol | 1ul |
基因组DNA 100ng/ul | 1ul |
ddH2O | 37.5 ul |
总计 | 50 ul |
Claims (6)
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201410656386.1A CN104513814A (zh) | 2014-11-18 | 2014-11-18 | I-TevIN201-Cas9null融合蛋白及其应用 |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201410656386.1A CN104513814A (zh) | 2014-11-18 | 2014-11-18 | I-TevIN201-Cas9null融合蛋白及其应用 |
Publications (1)
Publication Number | Publication Date |
---|---|
CN104513814A true CN104513814A (zh) | 2015-04-15 |
Family
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Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
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CN201410656386.1A Pending CN104513814A (zh) | 2014-11-18 | 2014-11-18 | I-TevIN201-Cas9null融合蛋白及其应用 |
Country Status (1)
Country | Link |
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CN (1) | CN104513814A (zh) |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN107794272A (zh) * | 2016-09-06 | 2018-03-13 | 中国科学院上海生命科学研究院 | 一种高特异性的crispr基因组编辑体系 |
Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN103388006A (zh) * | 2013-07-26 | 2013-11-13 | 华东师范大学 | 一种基因定点突变的构建方法 |
CN103620027A (zh) * | 2011-06-10 | 2014-03-05 | 巴斯夫植物科学有限公司 | 核酸酶融合蛋白及其用途 |
-
2014
- 2014-11-18 CN CN201410656386.1A patent/CN104513814A/zh active Pending
Patent Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN103620027A (zh) * | 2011-06-10 | 2014-03-05 | 巴斯夫植物科学有限公司 | 核酸酶融合蛋白及其用途 |
CN103388006A (zh) * | 2013-07-26 | 2013-11-13 | 华东师范大学 | 一种基因定点突变的构建方法 |
Non-Patent Citations (2)
Title |
---|
JOHN P GUILINGER ET AL.: "fusion of catalytically inactive cas9 to fokI nuclease improves the specificity of genome modification", 《NATURE BIOTECHNOLOGY》 * |
MARINE BEURDELEY ET AL.: "compact designer talens for efficient genome engineering", 《NATURE COMMUNICATIONS》 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN107794272A (zh) * | 2016-09-06 | 2018-03-13 | 中国科学院上海生命科学研究院 | 一种高特异性的crispr基因组编辑体系 |
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C06 | Publication | ||
PB01 | Publication | ||
ASS | Succession or assignment of patent right |
Owner name: SUZHOU GENE PLAYER BIOMEDICINE TECHNOLOGY CO., LTD Free format text: FORMER OWNER: LI YUNYING Effective date: 20150803 |
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C41 | Transfer of patent application or patent right or utility model | ||
EXSB | Decision made by sipo to initiate substantive examination | ||
SE01 | Entry into force of request for substantive examination | ||
TA01 | Transfer of patent application right |
Effective date of registration: 20150803 Address after: 215023 Suzhou Jiangsu Industrial Park, No., No. 388, building D, No. 404 Applicant after: Suzhou Jing bio Pharmaceutical Technology Co. Address before: 510000, No. 45, Zhongshan Avenue, Tianhe District, Guangdong, Guangzhou, T4 Applicant before: Li Yunying |
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CB02 | Change of applicant information |
Inventor after: Cheng Gang Inventor before: Li Yunying |
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CB03 | Change of inventor or designer information | ||
TA01 | Transfer of patent application right | ||
TA01 | Transfer of patent application right |
Effective date of registration: 20161219 Address after: 215000 Wuzhong District City, Suzhou Province, Guo Xiang street, East Ring Road, No. 2, building 999, No. Applicant after: SUZHOU KECHUANG BIOTECHNOLOGY Co.,Ltd. Address before: 215023 Suzhou Jiangsu Industrial Park, No., No. 388, building D, No. 404 Applicant before: Suzhou Jing bio Pharmaceutical Technology Co. |
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WD01 | Invention patent application deemed withdrawn after publication |
Application publication date: 20150415 |