CN103205500B - A kind of quick analysis and the multi-color fluorescence in situ hybridization method of qualification Semen Tritici aestivi exogenous chromosome - Google Patents
A kind of quick analysis and the multi-color fluorescence in situ hybridization method of qualification Semen Tritici aestivi exogenous chromosome Download PDFInfo
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Abstract
The invention provides a kind of quick analysis and identify the multi-color fluorescence in situ hybridization method of Semen Tritici aestivi exogenous chromosome, described method comprises the steps: 1) pass through N2O gas pretreatment vigorous the organizing of enzymolysis Helminthosporium sativum meristematic zone cell division obtain the division phases specimen that image is clear, Chromosome spread is good;2) fluorescent probe of nick translation method labeling wheat race basal gene group is utilized;3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;4) analytical procedure 3) the fluorescence in situ hybridization result that obtains.The method utilizing the present invention to provide not only can be used to identify exogenous chromosome and chromosome segment in wheat distance edge hybrid kind, it is also possible to is applied in the appraisal to exogenous chromosome in other crops distant hybridses and chromosome segment.
Description
Technical field
The invention belongs to Celluar and Molecular Biology research field.The method that the present invention relates to the multi-color fluorescence in situ hybridization of a kind of quick analysis and qualification Semen Tritici aestivi exogenous chromosome, the invention still further relates to a kind of method that plant chromosome specimen to being obtained carries out repeating hybridization analysis, the invention still further relates to a kind of method preparing plant chromosome division phases specimen, it is possible to obtain the division phases specimen that image is clear, Chromosome spread is good.
Background technology
Semen Tritici aestivi is one of the most important cereal crops, closely related with socio-economic development, grain security supply and human nutrition health.Genetic improvement is the key link improving yield and quality of wheat, and the improvement of current wheat breed mainly uses conventional cross-breeding approach, but traditional breeding way exists that cycle length, character improvement be notable and the shortcoming such as narrow range.Hereditary basis is narrow has become as key factor that the Main Agronomic Characters such as restriction crop varieties unit yield, resistance, adaptability promote further (leaf make the country prosperous etal.2011).Therefore, the hereditary basis widening kind has become the urgent needs of crop breeding development.
Distant hybridization is the important channel that species are formed, it it is one of the key factor of biological evolution, distant hybridization can break the boundary between kind of (or section, genus), the hereditary material between different plant species is made to exchange or combine, the beneficial characteristics that two or more species accumulate through long-term evolution is combined, double and natural selection through chromosome set is natural again, form the new species that vitality is higher.Exogenous gene is imported by distant hybridization, significant to modern wheat flour quality.
The GENE SOURCES of common wheat is wider, and in Tribe Triticeae, more than 300 species great majority can hybridize with common wheat, and 15 kinds (including 5 kinds of Triticum) of existing 5 genus displaced disease-resistant gene to common wheat.China the most by Semen Tritici aestivi and Thinopyrum intermedium, E. elongata distant hybridization success in the 1950's, has the most been bred as a collection of kind and has promoted on producing.Such as " the dragon wheat No. 1 ", " imperial wheat No. 2 ", the spring wheat varieties such as " Neoma Foams 6 " that are bred as by Thinopyrum intermedium.Meanwhile, 1 to No. 7 high-quality of octoploid of wheat-wheatgrass " in Yuan ", disease-resistant of incubation, it has also become good breeding parent.Being bred as a collection of wheat breed by Thinopyrum ponticum, wherein " No.6 Xiaoyan " Annual planting area once reached 66.67 ten thousand hm2, and used up to 20 years (Dong Yu treasure 2001) on producing.
Chromosome engineering had once played very important effect in the polyploid crop breeding histories such as Semen Tritici aestivi.20 century 70s, Europe is found that the 1RS/1BL translocation line material of rye (Secale cereale L.) in the Semen Tritici aestivi filial generation with rye (Secale cereale L.), and improve for wheat breed, cultivate some row high yields, disease-resistant, the dwarf varietiy of wheats such as love woods, and in the world the rapid spread in each Semen Tritici aestivi main producing region, every country is according to the breeding objective of oneself subsequently, the thousands of 1RS/1BL kind of transformation, produces for world wheat and is made that outstanding contribution.1BL/1RS transposition is widely distributed in world's wheat breed, by chromosome translocation specific between planting and replacement, the galianconism (1RS) of chromosomes of rye 1R is present in the chromosome set of a large amount of common wheat, and many genes to economical character with important function and resistant gene thus proceed to (appoint swallow and Wang Tao 2006) Wheat volatiles from rye (Secale cereale L.).
Traditional chromosome engineering exists that efficiency is low, cycle length, recombinant chromosome are difficult to accurate and effective and follow the tracks of and Rapid identification, and be difficult to series of problems such as being connected mutually with modern molecular biology technique, seriously limits developing further of chromosome engineering research.So analysis chromosome set achievement rapidly and efficiently is particularly important.Progress along with genome walking technology, the development of especially DNA hybridization in situ technique, useful instrument is provided for the qualification of alien chromosome lines, the identification of translocation breakpoint, the size of transposition fragment, position and breakpoint can be identified exactly, carry out wheat breed improvement for the useful gene of autotelic transfer and lay a good foundation.
Genomic in situ hybridization (GenomicinsituhybridizationGISH) is a kind of hybridization in situ technique grown up late 1980s.It uses from the total genomic dna of species as label probe, blockades with suitable concentration with the total genomic dna of another species, carries out in situ hybridization on target chromosome.Blockading between DNA and labeled DNA probe, the DNA that blockades is preferential and General Sequences hybridizes, and remaining specific sequence is mainly labeled probe and is hybridized.Mukai (MukaiandGill1991) etc. plants Trotociurartu total genomic dna with biotin labeling diploid AA genome ancestors, digoxigenin labeled diploid DD genome ancestors plant Aegilopssquarrosa total genomic dna, the BB genome ancestors that unlabelled total genomic dna is possible plant Aegilopsspeltoides, hexaploid common wheat (Triticumaestivum) metaphase chromosome is carried out in situ hybridization, only just A, B and D genome is shown as yellow, brown and orange with two kinds of fluoresceins simultaneously.Hereafter Sanchez-Moran (Sanchez-Moranetal.1999) etc. utilize this technology different colours show simultaneously wheat-rye derive kind in A, B, D and R genome.(the Hanetal.2003 such as Korea Spro;nullHanetal.2004) digoxin and biotin labeled genome GISH is utilized to identify the chromosome composition of partial amphidiploid and analyze the transposition between chromosome,But the probes label methods used is mostly indirect method,I.e. use the non-fluorescence material such as label probe such as biotin or digoxin,Fluorescent material is brought into again by affine connection or immunoreation,There is hybridization signal amplification,Although indirect method FISH can amplify hybridization signal,Increase hybridization sensitivity,But to hatch through loaded down with trivial details eluting and antibody after Za Jiao and amplify hybridization signal,Waste time and energy,And in elution process, easily cause the problems such as chromosome loss deformation,This experiment is by direct method FISH,I.e. when nick-translation method label probe,It is directly incorporated into fluorescein ribonucleoside triphosphote label,Just can microscopy through simple flushing after hybridization,Greatly simplifie in situ hybridization program,Keep the optimal morphology of chromosome,Mutual transposition to identifying between exogenous chromosome composition and analysis and chromosome can well be observed.
Summary of the invention
It is an object of the present invention to provide a kind of quick analysis and identify the multi-color fluorescence in situ hybridization method of Semen Tritici aestivi exogenous chromosome.
Specifically, the analysis of the present invention and the method for qualification Semen Tritici aestivi exogenous chromosome comprise the steps:
1) N is passed through2O gas pretreatment vigorous the organizing of enzymolysis Helminthosporium sativum meristematic zone cell division obtain the division phases specimen that image is clear, Chromosome spread is good;
2) nick translation method labelling labeling wheat race basal gene group fluorescent probe is utilized;
3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;
4) analytical procedure 3) the fluorescence in situ hybridization result that obtains.
Wherein step 1) comprise the steps: (a) N2O gas pretreatment: take suitable Helminthosporium sativum, is placed in moistening centrifuge tube, puts into N2O air chamber processes 0.5-5 hour, N2The pressure of O is 10ATM (1.01Mpa);B () is by N2The tip of a root of O gas pretreatment is fixed;C () enzymolysis processing: washed with water by the tip of a root fixed, cut off root tips separate living tissue, by pectase and cellulose treatment 30min-2h.
Wherein step 2) the Tribe Triticeae basal gene group of labelling selected from AA genome, DD genome, RR rye (Secale cereale L.) genome, 10X E. elongata genome, or transgenic purpose fragment vector.
In above-mentioned steps, the step of most critical is step 3) mixed proportion of fluorescent probe of nick translation method labelling used by hybridization, the mass ratio of AA genome and DD genome can not be less than 1: 4.Such as, split coil method mitosis metaphase of little wheat of laying down (couchgrass and common wheat filial generation) and Triticale hexaploide Lart. (rye (Secale cereale L.) and common wheat filial generation) is carried out fluorescence in situ hybridization;nullProbe mixed proportion therein should be that the number according to different materials (exogenous chromosome is derived from rye (Secale cereale L.) or couchgrass) exogenous chromosome carrys out mixed probe,AA genome and DD genomic homology are higher,So AA genome and DD genome have crisscrossing,The color of chromosome is inconsistent (during probe labelling with the color of probe labelling,AA genome is green,DD genome is red,After having hybridized,AA genome is green,DD genome is red),So probe ratio (AA genome and the ratio of DD genome) can not be less than 1: 4,BB genome is as blockading,Certain homology is had with AA genome and DD genome,But and BB genome (oneself is) homology own is the highest,So separating four chromosome sets with an a high proportion of BB genome of blockading to beneficially one time hybridization region of blockading,Blockading of BB genome is relatively up to 160-200 times than (mass ratio).
A further object of the present invention is to provide a kind of method that plant chromosome specimen to being obtained carries out repeating hybridization analysis.
Specifically, the present invention plant chromosome specimen obtained is carried out repeat hybridization analysis method comprise the steps:
1) N is passed through2O gas pretreatment enzymolysis of plants Meristernatic zone or vigorous the organizing of bud point meristematic zone cell division obtain the division phases specimen that image is clear, Chromosome spread is good;
2) nick translation method mark fluorescent probe is utilized;
3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;
4) rinsing through simple, on the basis of keeping chromosome morphology, the multiple hybridization probe of Reusability carries out one or many hybridization, carries out qualification and the analysis of exogenous chromosome.
In above-mentioned steps, the step of most critical is step 4) in, rinse through simple, the multiple hybridization probe of Reusability on the basis of keeping chromosome morphology, carry out one or many hybridization successively, carry out qualification and the analysis of exogenous chromosome.After having hybridized for the first time; the anti-quencher containing DAPI is had on chromosome specimen; relatively thickness; have only to 2 × SSC (protein on protection chromosome; preventing chromosome from deforming) eluting just can carry out follow-up hybridization (such as the most successively under room temperature; second time hybridization, hybridization etc. for the third time), it is to avoid the problem such as chromosome loss deformation in loaded down with trivial details eluting before and elution process.
In one embodiment of the invention, the present invention provides a kind of quick analysis and identifies the multi-color fluorescence in situ hybridization method of Semen Tritici aestivi exogenous chromosome, it is characterised in that:
1) N is passed through2O gas pretreatment enzymolysis Gansu Province spring 23, the Meristernatic zone cell of octoploid of wheat-wheatgrass XY784 obtains the division phases specimen that image is clear, Chromosome spread is good;
2) nick translation method labelling A genome, D genome, R genome and Thinopyrum ponticum fluorescent probe are utilized;
3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;
4) analytical procedure 3) the fluorescence in situ hybridization result that obtains.
In one embodiment of the invention, described chromosome to be detected and chromosome segment are selected from Gansu Province spring 23, the transgenic line of octoploid of wheat-wheatgrass XY784 and Pwy86.
Although one or more in above-mentioned technology are applied in relevant research, but the experimental program that the most several technological maheup of integrated application is complete, and it is applied in Wide_cross in Plant kind the qualification of exogenous chromosome or chromosome segment has not seen that correlational study is reported.The present invention utilizes this set research approach successfully with the external source autosome in high-sensitivity detection distant hybridization plant first, overcome the problem that in prior art, plant autosome Detection results is undesirable, it is a kind of technological break-through, embodies this research method and there is preferable advance, innovation and practicality.
In sum, the present invention provides following:
1. quick analysis and a multi-color fluorescence in situ hybridization method for qualification exogenous chromosome, it comprises the steps:
1) N is passed through2O gas pretreatment vigorous the organizing of enzymolysis of plants Meristernatic zone cell division obtain the division phases specimen that image is clear, Chromosome spread is good;
2) fluorescent probe of nick translation method labeling wheat race basal gene group is utilized;
3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;
4) analytical procedure 3) the fluorescence in situ hybridization result that obtains.
2. the 1st described method, wherein step 1) comprise the steps: (a) N2O gas pretreatment: take suitable Helminthosporium sativum, is placed in moistening centrifuge tube, puts into N2O air chamber processes 0.5-5 hour, N2The pressure of O is 10ATM (1.01Mpa);B () is by N2The tip of a root of O gas pretreatment is fixed;C () enzymolysis processing: washed with water by the tip of a root fixed, cut off root tips separate living tissue, by pectase and cellulose treatment 30min-2h.
3. the 1st described method, wherein step 2) in the Tribe Triticeae basal gene group of labelling selected from AA genome, DD genome, RR rye (Secale cereale L.) genome, 10X E. elongata genome or transgenic purpose fragment vector.
4. the 1st described method, wherein the mass ratio of the probe mixing of diploid Urartu AA genome and diploid aegilops tauschii D D genome can not be less than 1: 4.
5. the 1st described method, wherein diploid intend this inferior you torr BB genome mass ratio of blockading be 160-200 times.
6. the 1st described method, wherein carries out repeating hybridization analysis to the chromosome of wheat specimen obtained, and the most often step repeats hybridization analysis eluting is with eluting under 2 × SSC room temperature.
7. the method carrying out the plant chromosome specimen obtained repeating hybridization analysis, described method comprises the steps:
1) N is passed through2O gas pretreatment enzymolysis of plants Meristernatic zone or vigorous the organizing of bud point meristematic zone cell division obtain the division phases specimen that image is clear, Chromosome spread is good;
2) nick translation method mark fluorescent probe is utilized;
3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;
4) rinsing through simple, on the basis of keeping chromosome morphology, the multiple hybridization probe of Reusability carries out one or many hybridization, carries out qualification and the analysis of exogenous chromosome.
8. the 7th described method, wherein step 4) simple flushing be with eluting under 2 × SSC room temperature.
9. the method preparing plant chromosome division phases specimen, described method comprises the steps:
(a)N2O gas pretreatment: take the suitable tip of a root of described plant or bud point, be placed in moistening centrifuge tube, put into N2O air chamber processes 0.5-5 hour, N2The pressure of O is 10ATM (1.01Mpa);B () is by N2The tip of a root or the bud point of O gas pretreatment are fixed;C () enzymolysis processing: the tip of a root fixed or bud point are washed with water, cut off root tips or shoot tip meristem, by pectase and cellulose treatment 30min-2h.
10. the 9th described method, wherein said plant is monocotyledon.
Accompanying drawing is sketched
Fig. 1 .1RS/1BL translocation line chromosome forms.Arrow show 1RS chromosome.Figure Green represents rye (Secale cereale L.) R, and yellow represents Semen Tritici aestivi A genome, and brown represents Semen Tritici aestivi 1 B gene group, and redness represents Semen Tritici aestivi D genome.
Fig. 2. octoploid of wheat-wheatgrass chromosome forms.Arrow and asterisk show Semen Tritici aestivi A-D group two to translocation chromosome.Green represents Thinopyrum ponticum, and yellow represents Semen Tritici aestivi A genome, and brown represents Semen Tritici aestivi 1 B gene group, and redness represents Semen Tritici aestivi D genome.
Fig. 3. three in situ hybridization A: the fluorescence in situ hybridization detection of transgenic signal of chromosome of wheat specimen, arrow show the insertion point of genes of interest;B: multi-color fluorescence in situ hybridization, the chromosome of wheat group at detection transgenic loci place, green represents Semen Tritici aestivi A chromosome group, and brown represents Semen Tritici aestivi B chromosome group, and redness represents Semen Tritici aestivi D chromosome set, and arrow show genes of interest and inserts the A chromosome group of Semen Tritici aestivi;C: repetitive sequence pSC119.2 and the concrete chromosome at pAS1 testing goal gene place, green shows repetitive sequence pSC119.2 signal, and redness shows repetitive sequence pAS1 signal, and arrow show genes of interest and inserts the 1A chromosome of Semen Tritici aestivi.
Detailed description of the invention
It is further elucidated with the present invention by the following examples.However, it should be understood that the purpose that described embodiment is merely illustrative, it is not intended to limit scope and spirit of the present invention.
It addition, it should also be realized by those skilled in the art that unless specifically stated otherwise, reagent used in following embodiment is the reagent of commercially available analytical pure rank.
The qualification of embodiment 1. Gansu Province spring 23 spring wheat material
1. the preparation of Gansu Province spring 23 spring wheat split coil method mitosis metaphase
Gansu Province spring 23 spring wheat used, the germ plasm resource (can be found in Yang Wen hero 2005) preserved from the general laboratory of South Korea of Inst. of Genetics and Development Biology, CAS.
1)N2O processes the tip of a root
When the tip of a root grows to 2-3cm, cutting, be placed in moistening centrifuge tube, put into process 1-3h in N2O air chamber after closeing the lid, pressure is 10ATM (1.01Mpa);
2) tip of a root is fixed
90% acetic acid fixes 5-10 minute (less than 1h), distillation washing 2 times.The tip of a root after Gu Ding can proceed to put into-20 DEG C in the ethanol of 70% and can preserve for many years;
3) enzymolysis
nullWith filter paper, the water on the tip of a root is somewhat blotted,Root apical meristem is cut,Put into 20 μ L mixed liquors (the enzymolysis solution preparation a: plastic culture dish is put on balance of pectase and cellulase,1 × citrate buffer solution (10mM sodium citrate+10mMEDTA is added to the inside,pH5.5)9.7g,Taking-up is placed on ice,Weigh 0.1g pectase Y-23 (purchased from JapanYakult company of Japan,1%w/w) with 0.2g cellulase OnozukaR-10 (purchased from JapanYakult company of Japan,2%w/w) add in buffer,With rifle head pressure-vaccum hydrotropy,Enzyme is dispensed in 0.5ml thin-walled PCR pipe with liquor separator after dissolving,-20 DEG C of preservations) in,37 DEG C of water-baths 40-60 minute,
4) sheet is dripped
2 times are washed with 70% ethanol, some ethanol is stayed when washing second time, about 200ul is in centrifuge tube, with dissecting needle, the tip of a root is smashed to pieces, centrifugal about 10 seconds of low speed (< 2000 turns), ethanol is fallen dry, ice acetic acid (each tip of a root 20-40 μ l, depending on plant root tip size) suspension root-tip cells.
5) microscopy
Being placed in moistening box by clean microscope slide, every microscope slide drips 6-7 μ l root-tip cells suspension, covers lid, microscopy after 5 minutes, by chromosome sectioning Saving specimen in refrigerator standby.
2.AA group, the probe labelling of DD group and RR group
1) CTAB method extracts plant genome DNA
Take plant (rye (Secale cereale L.), Thinopyrum ponticum, Triticum tauschii, Urartu and speltoides, the blade that (these seeds are purchased from GermanyIPK institute) children is tender, reference literature (Kidwelletal.1992) extracts the DNA of plant, makes the concentration of DNA be finally reached 200ng/ul, then label probe.Wherein speltoides to blockade, concentration 2000ng/ul to be reached.
2) following component is added on ice in centrifuge tube:
After adding well, repeatedly blowing and beating mixing with rifle head, it is impossible to vortex, 15 DEG C are incubated 2 hours.It is placed in 15 DEG C of reaction 2h in metal bath instrument (H2O3-PRO, China).(-the dNTP of labelling is AlexaFluor-488-dUTP (green glow), Texas-5-dCTP (HONGGUANG) is purchased from Invitrogen company;DNA polymerase i is purchased from Invitrogen company, and concentration is 10U/ μ L, can be used directly, 10xNicktranslationbufferfor100mlTris6.05g, MgCl2, 0.47g, HCl adjust pH7.8);Wherein rye (Secale cereale L.), E. elongata and Urartu are with green fluorescent label (AlexaFluor-488-dUTP (green glow)), and Triticum tauschii red fluorescence is marked (Texas -5-dCTP), speltoides blockades (i.e., speltoides genomic DNA high pressure is interrupted, 115 DEG C, 8 minutes, it was about 200-300bp that genomic DNA is broken into fragment), before blockading, genomic fragment needs to be broken into 200-300bp, and such effect of blockading is best.
3) 13000 leaving the heart 30-40 minute, abandon supernatant, wash primary sedimentation with 70% ethanol and dehydrated alcohol respectively, lucifuge is dried.
4) add 10 μ l2 × SSC, 1 × TE buffer (pH7.0), make the final concentration of 200ng/ul of probe.
3. utilize labelling good genomic probe that Gansu Province spring 23 spring wheat carries out the qualification of fluorescence in situ hybridization
1) Gansu Province spring 23 spring wheat metaphase chromosome specimen is prepared by the method for program 1.
2) specimen to be hybridized (film-making) is put into 0.125J/cm2 crosslinking in UV-crosslinked instrument (code-No.CL-1000, purchased from UVP company of the U.S.).
3) film-making is placed on ice, take out the good probe of a small amount of labelling by rye (Secale cereale L.): AA group: BB group: DD group=1: 1: 4: 4 or Thinopyrum ponticum: AA group: BB group: DD group=1: 1.5: 4: 4 dilution proportion, the hybridization solution 6 μ l diluted is added on every microscope slide, covered, 90 DEG C of degeneration 5 minutes, 55 DEG C hybridize more than 6 hours.
4) film-making is taken out from wet box, put into and 2 × SSC makes coverslip landing, with absorbent paper, the slice, thin piece back side is dried, drip a upper anti-quencher (H-1200 containing DAPI, purchased from VectorLabs company of the U.S.), cover the coverslip of 24 × 50mm, after several minutes, i.e. can use fluorescence microscope (OlympusBX61) to carry out microscopy, photograph (MagnafierCCDcamera).
4. result and discussion
Result of study is shown in Fig. 1.
As it is shown in figure 1, be shown that 1RS/1BL translocation line chromosome composition.Arrow show 1RS chromosome.Figure Green represents rye (Secale cereale L.) R, article two, green the short arm of a chromosome, being from rye (Secale cereale L.) 1RS, yellow represents Semen Tritici aestivi A genome, has 14 chromosomes, brown represents Semen Tritici aestivi 1 B gene group, having 14 chromosomes, redness represents Semen Tritici aestivi D genome, has 14 chromosomes, whole cell has 42 chromosomes, is the chromosome composition of 1RS/1BL translocation line.
This research utilizes two fluorescent probes of four genomes first, Gansu Province spring 23 spring wheat is carried out genome Chromosome Identification, just can clearly be analyzed by an in situ hybridization and separate four chromosome sets, and four genomic chromosome compositions are cheer and bright, show that the method utilizing the present invention to use successfully detects and identifies existence and the structure of exogenous chromosome, this experiment terminates simply to need 3 day time to identifying from sending out seed, the most rapidly and efficiently and also sensitive.
The chromosome composition analysis of embodiment 2. octoploid of wheat-wheatgrass XY784
1. the preparation of octoploid of wheat-wheatgrass XY784 split coil method mitosis metaphase
Octoploid of wheat-wheatgrass XY784 used, the germ plasm resource (Zhang Xueyong etal.1995) preserved from Inst. of Genetics and Development Biology, CAS's Li Zhensheng laboratory.
1) N2O processes the tip of a root with embodiment 1.1
2) tip of a root is fixing with embodiment 1.2
3) enzymolysis is with embodiment 1.3
4) sheet is dripped with embodiment 1.4
5) microscopy is with embodiment 1.5
2.AA group, the probe labelling of DD group and Thinopyrum ponticum group
1) CTAB method extracts plant genome DNA with embodiment 2.1
2) probe labelling is with embodiment 2.2
3) with embodiment 2.3
4) with embodiment 2.4
3. utilize labelling good genomic probe that octoploid of wheat-wheatgrass XY784 carries out the qualification of fluorescence in situ hybridization
1) octoploid of wheat-wheatgrass XY784 metaphase chromosome specimen is prepared by the method for program 1.
2) with embodiment 3.2
3) film-making is placed on ice, take out the good probe of a small amount of labelling by Thinopyrum ponticum: AA group: BB group: DD group=1: 1: 4: 4 or Thinopyrum ponticum: AA group: BB group: DD group=1: 1.5: 4: 4 dilution proportion, the hybridization solution 6 μ l diluted is added on every microscope slide, covered, 90 DEG C of degeneration 5 minutes, 55 DEG C hybridize more than 6 hours.
4) with embodiment 3.4
4. result and discussion
Result of study is shown in Fig. 2.
As it is shown in figure 1, be shown that octoploid of wheat-wheatgrass chromosome composition.Green represents Thinopyrum ponticum, chromosome number is 14, yellow represents Semen Tritici aestivi A genome, chromosome number is 12, fewer than normal A group chromosome 2, and brown represents Semen Tritici aestivi 1 B gene group, chromosome number is 14, redness represents Semen Tritici aestivi D genome, and chromosome number is 16, more than normal D group chromosome 2.Arrow and asterisk show Semen Tritici aestivi A-D group two to translocation chromosome.Whole cell has 56 chromosomes, is an octoploid of wheat-wheatgrass.
This research utilizes two fluorescent probes of four genomes first, octoploid of wheat-wheatgrass XY784 is carried out genome Chromosome Identification, just can clearly be analyzed by an in situ hybridization and separate four chromosome sets, and four genomic chromosome compositions are cheer and bright, also analyze A-D group two to translocation chromosome simultaneously, identify for later economical character and molecular marker provides basis, show that the method utilizing the present invention to use successfully detects and identifies existence and the composition of exogenous chromosome, this experiment is from sending out seed to identifying that terminating is to need 3 day time, the most rapidly and efficiently and sensitive.
Prepared by the metaphase chromosome of the different plant of embodiment 3.
The present invention is further described, it will be appreciated by those skilled in the art that the present invention is not limited to these specific embodiments referring to specific embodiment.
1. seed germination
(1) seed is placed in the culture dish being lined with moistening filter paper, 21-23 DEG C of calorstat is sprouted.
2. prepared by plant chromosome specimen
1) with embodiment 1.1.
2) with embodiment 1.2.
3) with embodiment 1.3.
4) with embodiment 1.4.
5) with embodiment 1.5.
3. in situ hybridization
1) Metaphase Chromosomes specimen is prepared by the method for program 1.
2) with embodiment 3.2
3) with embodiment 3.3
4) when carrying out second time in situ hybridization, the chromosome specimen hybridized is put into the anti-quencher washed away in 2 × SSC containing DAPI, with absorbent paper, the slice, thin piece back side is dried, carry out secondary in situ hybridization, subsequent step is with embodiment 3.4, and in situ hybridization is ibid for the third time.
3. result and discussion
Result of study is shown in Fig. 3.
As it is shown on figure 3, three in situ hybridization figure A: fluorescence in situ hybridization detection of transgenic signal of the same specimen of chromosome of wheat, arrow show the insertion point of genes of interest;Figure B: multi-color fluorescence in situ hybridization, the chromosome of wheat group at detection transgenic loci place, green represents Semen Tritici aestivi A chromosome group, and brown represents Semen Tritici aestivi B chromosome group, redness represents Semen Tritici aestivi D chromosome set, and arrow show genes of interest and inserts the A chromosome group of Semen Tritici aestivi;Figure C: repetitive sequence pSC119.2 and the concrete chromosome at pAS1 testing goal gene place, green shows repetitive sequence pSC119.2 signal, and redness shows repetitive sequence pAS1 signal, and arrow show genes of interest and inserts the 1A chromosome of Semen Tritici aestivi.
This research specimen same to chromosome of wheat first carries out three in situ hybridizations and is analyzed, just can microscopy through simple flushing after hybridization, and the multiple hybridization probe of Reusability on the basis of chromosome morphology can kept, greatly simplifie in situ hybridization program, be highly suitable for qualification and the analysis of exogenous chromosome.
Should be appreciated that, although with reference to the embodiment that it is exemplary, the present invention carried out particularly shown and described, but it will be apparent to an ordinarily skilled person in the art that, under conditions of without departing substantially from by the spirit and scope of the present invention defined in appended claims, the change of various forms and details can be carried out wherein, the combination in any of various embodiment can be carried out.
List of references:
1.HanFP, FedakG, BenabdelmounaA, ArmstrongK, OuelletT (2003) CharacterizationofsixwheatxThinopyrumintermediumderivati vesbyGISH, RFLP, andmulticolorGISH.Genome46:490-495
HanFP, LiuB, FedakG, LiuZH (2004) Genomicconstitutionandvariationinfivepartialamphiploidso fwheat-ThinopyrumintermediumasrevealedbyGISH, multicolorGISHandseedstorageproteinanalysis.Theoreticala ndAppliedGenetics109:1070-1076
KidwellK, OsbornT, BeckmanJ (1992) SimpleplantDNAisolationprocedures.Plantgenomes:methodsfo rgeneticandphysicalmapping.:1-13MukaiY, GillB (1991) Detectionofbarleychromatinaddedtowheatbygenomicinsituhyb ridization.Genome34:448-452
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1BL/1RS chromosome translocation in Ren Yan, Wang Tao (2006) Semen Tritici aestivi.
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Claims (5)
1. quick analysis and a multi-color fluorescence in situ hybridization method for qualification Semen Tritici aestivi exogenous chromosome, it comprises the steps:
1) N is passed through2O gas pretreatment vigorous the organizing of enzymolysis Helminthosporium sativum meristematic zone cell division obtain the division phases specimen that image is clear, Chromosome spread is good;
2) fluorescent probe of nick translation method labeling wheat race basal gene group is utilized;
3) utilize step 2) fluorescent probe that builds is to utilizing step 1) mitosis metaphase split coil method chromosome carry out fluorescence in situ hybridization;
4) analytical procedure 3) the fluorescence in situ hybridization result that obtains,
Wherein, step 2) in the Tribe Triticeae basal gene group of labelling be AA genome, DD genome, RR rye (Secale cereale L.) genome or Thinopyrum ponticum genome, or transgenic purpose fragment vector;And the labelling of described fluorescent probe is carried out by mixing the base combining fluorescein when synthesizing the complementary strand of described Tribe Triticeae basal gene group, wherein rye (Secale cereale L.), E. elongata and Urartu green fluorescent label AlexaFluor-488-dUTP labelling, Triticum tauschii red fluorescence is marked Texas-5-dCTP labelling;Step 3) in fluorescent probe used be RR rye (Secale cereale L.) genome, AA genome and the fluorescent probe of DD genome of labelling, or the Thinopyrum ponticum genome of labelling, AA genome and the fluorescent probe of DD genome, and the mixing quality ratio of the fluorescent probe of the AA genome of wherein said labelling and DD genome is no less than 1∶4;Further, step 3) in situ hybridization during blockade with BB genome, and it is 160-200 times for the mass ratio blockaded.
2. the method described in claim 1, wherein step 1) comprise the steps: (a) N2O gas pretreatment: take suitable Helminthosporium sativum, is placed in moistening centrifuge tube, puts into N2O air chamber processes 0.5-5 hour, N2The pressure of O is 10ATM (1.01Mpa);B () is by N2The tip of a root of O gas pretreatment is fixed;C () enzymolysis processing: washed with water by the tip of a root fixed, cut off root tips separate living tissue, by pectase and cellulose treatment 30min-2h.
3. the method described in claim 1, wherein said AA genome is diploid Urartu AA genome, and described DD genome is diploid aegilops tauschii D D genome.
4. the method described in claim 1, wherein step 3) in situ hybridization during with diploid intend this inferior you torr BB genome blockade.
5. the method described in claim 1, wherein carries out repeating hybridization analysis to the chromosome of wheat specimen obtained, and the most often step repeats hybridization analysis eluting is with eluting under 2 × SSC room temperature.
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