CA2998381A1 - Pathogen detection using next generation sequencing - Google Patents
Pathogen detection using next generation sequencing Download PDFInfo
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- CA2998381A1 CA2998381A1 CA2998381A CA2998381A CA2998381A1 CA 2998381 A1 CA2998381 A1 CA 2998381A1 CA 2998381 A CA2998381 A CA 2998381A CA 2998381 A CA2998381 A CA 2998381A CA 2998381 A1 CA2998381 A1 CA 2998381A1
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| CN111518711A (zh) * | 2019-02-02 | 2020-08-11 | 常熟理工学院 | 一株肠杆菌株及其在联产微生物胞外多糖和2,3-丁二醇中的应用 |
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| CN111527044A (zh) | 2017-10-26 | 2020-08-11 | 阿尔缇玛基因组学公司 | 用于序列判定的方法和系统 |
| US11031092B2 (en) * | 2017-11-01 | 2021-06-08 | International Business Machines Corporation | Taxonomic annotation of variable length metagenomic patterns |
| CN108220211B (zh) * | 2018-04-02 | 2019-12-31 | 中国科学院微生物研究所 | 一株嗜油不动杆菌nmb17及其在植物病害防治中的应用 |
| EP3844298A4 (de) * | 2018-08-27 | 2022-05-18 | Idbydna Inc. | Verfahren und systeme zur bereitstellung von probenformationen |
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| CN109610008A (zh) * | 2018-11-08 | 2019-04-12 | 广州华大基因医学检验所有限公司 | 基于高通量测序的中枢系统感染病原检测文库构建方法、检测方法和试剂盒 |
| CN109504688B (zh) * | 2018-12-28 | 2020-06-12 | 华南农业大学 | ITS1基因在检测白粉病病原Erysiphe alphitoides中的应用 |
| WO2020185790A1 (en) * | 2019-03-10 | 2020-09-17 | Ultima Genomics, Inc. | Methods and systems for sequence calling |
| FR3099182B1 (fr) | 2019-07-23 | 2022-11-25 | Biomerieux Sa | Procédé de détection et de quantification d'une espèce biologique d'intérêt par analyse métagénomique |
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| FR3099180B1 (fr) * | 2019-07-23 | 2022-11-25 | Biomerieux Sa | Procédé de détection et de quantification d'une espèce biologique d'intérêt par analyse métagénomique, comportant l'utilisation d'une espèce de contrôle. |
| CN114787928A (zh) * | 2019-11-12 | 2022-07-22 | 雷杰纳荣制药公司 | 用于鉴定、分类和/或排序遗传序列的方法和系统 |
| WO2021247886A1 (en) * | 2020-06-03 | 2021-12-09 | Arc Bio, Llc | Systems, methods, and media for classifying genetic sequencing results based on pathogen-specific adaptive thresholds |
| CN111951895B (zh) * | 2020-07-09 | 2023-12-26 | 苏州协云基因科技有限公司 | 基于宏基因组学的病原分析方法、分析装置、设备及存储介质 |
| CN111816245B (zh) * | 2020-07-20 | 2022-09-09 | 成都博欣医学检验实验室有限公司 | 结合mNGS和临床知识库的病原微生物检测方法及系统 |
| CN113096737B (zh) * | 2021-03-26 | 2023-10-31 | 北京源生康泰基因科技有限公司 | 一种用于对病原体类型进行自动分析的方法及系统 |
| CN113066533B (zh) * | 2021-04-02 | 2023-04-04 | 欧蒙医学诊断（中国）有限公司 | 一种mNGS病原体数据分析方法 |
| EP4326297A1 (de) * | 2021-04-21 | 2024-02-28 | Rutgers, the State University of New Jersey | Verfahren zur analyse von wirts-mikrobiom-interaktionen an einzelzellen und zugehörigen gensignaturen bei krebs |
| CN113326123B (zh) * | 2021-04-30 | 2024-03-26 | 杭州绳武科技有限公司 | 一种基于容器技术的生物信息分析计算系统及方法 |
| US20240266072A1 (en) * | 2021-05-21 | 2024-08-08 | Battelle Memorial Institute | System and method for genomic analysis of pathogens |
| WO2022272085A1 (en) * | 2021-06-25 | 2022-12-29 | Atossa Therapeutics, Inc. | Remote detection of pathogens |
| CA3223241A1 (en) * | 2021-07-02 | 2023-01-05 | Simone OLGIATI | Method for determining viral contamination |
| EP4239638A1 (de) * | 2022-03-03 | 2023-09-06 | Ares Trading S.A. | Verfahren zum bestimmen viraler verunreinigung |
| WO2024006744A2 (en) * | 2022-06-28 | 2024-01-04 | Foundation Medicine, Inc. | Methods and systems for normalizing targeted sequencing data |
| CN115537462B (zh) * | 2022-10-13 | 2023-08-11 | 深圳市儿童医院 | 一种同时检测病原菌和宿主基因表达量的测序方法及在细菌性脑膜炎诊断和预后中的应用 |
| CN117746980A (zh) * | 2023-12-18 | 2024-03-22 | 广州凯普医学检验所有限公司 | 一种流感病毒自动化快速分型方法、装置、设备及介质 |
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| CN102154450B (zh) * | 2010-12-23 | 2014-07-16 | 深圳华大基因科技有限公司 | 一种检测肠炎致病菌的方法 |
| WO2012101643A1 (en) * | 2011-01-26 | 2012-08-02 | Ramot At Tel-Aviv University Ltd. | Detection of infection by a microorganism using small rna sequencing subtraction and assembly |
| WO2012122522A2 (en) * | 2011-03-09 | 2012-09-13 | Washington University | Cultured collection of gut microbial community |
| CA2930597A1 (en) * | 2015-05-22 | 2016-11-22 | The University Of British Columbia | Methods for the graphical representation of genomic sequence data |
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| CN111518711A (zh) * | 2019-02-02 | 2020-08-11 | 常熟理工学院 | 一株肠杆菌株及其在联产微生物胞外多糖和2,3-丁二醇中的应用 |
| CN111518711B (zh) * | 2019-02-02 | 2021-12-07 | 常熟理工学院 | 一株肠杆菌株及其在联产微生物胞外多糖和2,3-丁二醇中的应用 |
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| US11380421B2 (en) | 2022-07-05 |
| EP3353696A4 (de) | 2019-05-29 |
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