CA2864676C - Methods and kits for reducing non-specific nucleic acid amplification - Google Patents
Methods and kits for reducing non-specific nucleic acid amplification Download PDFInfo
- Publication number
- CA2864676C CA2864676C CA2864676A CA2864676A CA2864676C CA 2864676 C CA2864676 C CA 2864676C CA 2864676 A CA2864676 A CA 2864676A CA 2864676 A CA2864676 A CA 2864676A CA 2864676 C CA2864676 C CA 2864676C
- Authority
- CA
- Canada
- Prior art keywords
- nucleic acid
- methods
- kits
- acid amplification
- specific nucleic
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
- 150000007523 nucleic acids Chemical class 0.000 title abstract 7
- 102000039446 nucleic acids Human genes 0.000 title abstract 7
- 108020004707 nucleic acids Proteins 0.000 title abstract 7
- 238000000034 method Methods 0.000 title abstract 5
- 230000003321 amplification Effects 0.000 title abstract 4
- 238000003199 nucleic acid amplification method Methods 0.000 title abstract 4
- 230000015572 biosynthetic process Effects 0.000 abstract 1
- 239000000539 dimer Substances 0.000 abstract 1
- 238000004519 manufacturing process Methods 0.000 abstract 1
- 238000003786 synthesis reaction Methods 0.000 abstract 1
Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P19/00—Preparation of compounds containing saccharide radicals
- C12P19/26—Preparation of nitrogen-containing carbohydrates
- C12P19/28—N-glycosides
- C12P19/30—Nucleotides
- C12P19/34—Polynucleotides, e.g. nucleic acids, oligoribonucleotides
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6848—Nucleic acid amplification reactions characterised by the means for preventing contamination or increasing the specificity or sensitivity of an amplification reaction
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/113—Modifications characterised by incorporating modified backbone
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/179—Modifications characterised by incorporating arbitrary or random nucleotide sequences
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/204—Modifications characterised by specific length of the oligonucleotides
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2527/00—Reactions demanding special reaction conditions
- C12Q2527/107—Temperature of melting, i.e. Tm
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Molecular Biology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- Microbiology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Physics & Mathematics (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Immunology (AREA)
- General Chemical & Material Sciences (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201261599119P | 2012-02-15 | 2012-02-15 | |
| US61/599,119 | 2012-02-15 | ||
| US13/446,474 | 2012-04-13 | ||
| US13/446,474 US9353393B2 (en) | 2012-02-15 | 2012-04-13 | Methods and kits for reducing non-specific nucleic acid amplification |
| PCT/US2013/026136 WO2013123187A1 (en) | 2012-02-15 | 2013-02-14 | Methods and kits for reducing non-specific nucleic acid amplification |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CA2864676A1 CA2864676A1 (en) | 2013-08-22 |
| CA2864676C true CA2864676C (en) | 2021-06-15 |
Family
ID=48945882
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA2864676A Active CA2864676C (en) | 2012-02-15 | 2013-02-14 | Methods and kits for reducing non-specific nucleic acid amplification |
Country Status (6)
| Country | Link |
|---|---|
| US (1) | US9353393B2 (enExample) |
| EP (1) | EP2814976B1 (enExample) |
| JP (1) | JP6225123B2 (enExample) |
| CN (1) | CN104093850B (enExample) |
| CA (1) | CA2864676C (enExample) |
| WO (1) | WO2013123187A1 (enExample) |
Families Citing this family (15)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP3428290B1 (en) | 2012-07-26 | 2022-04-06 | Illumina, Inc. | Compositions and methods for the amplification of nucleic acids |
| US9938568B2 (en) | 2013-07-26 | 2018-04-10 | General Electric Company | Ligase-assisted nucleic acid circularization and amplification |
| US9587263B2 (en) * | 2014-03-26 | 2017-03-07 | General Electric Company | Isothermal amplification under low salt condition |
| US10683534B2 (en) * | 2015-01-27 | 2020-06-16 | BioSpyder Technologies, Inc. | Ligation assays in liquid phase |
| EP3201350B1 (en) | 2014-09-30 | 2020-12-02 | Global Life Sciences Solutions USA LLC | Method for nucleic acid analysis directly from an unpurified biological sample |
| US11266337B2 (en) | 2015-09-09 | 2022-03-08 | Drawbridge Health, Inc. | Systems, methods, and devices for sample collection, stabilization and preservation |
| US10077459B2 (en) * | 2016-05-04 | 2018-09-18 | General Electric Company | Cell-free protein expression using rolling circle amplification product |
| US11299776B2 (en) | 2017-05-10 | 2022-04-12 | Board Of Regents, The University Of Texas System | Methods and devices related to amplifying nucleic acid at a variety of temperatures |
| US11001868B2 (en) * | 2017-08-11 | 2021-05-11 | Global Life Sciences Solutions Operations UK Ltd | Cell-free protein expression using double-stranded concatameric DNA |
| CN111334562A (zh) * | 2018-12-19 | 2020-06-26 | 合肥铼科生物科技有限公司 | 一种含有修饰引物的核酸扩增方法和试剂盒 |
| CN110295241A (zh) * | 2019-07-11 | 2019-10-01 | 深圳易致生物科技有限公司 | 用于检测尿路感染的引物组和包含该引物组的试剂盒 |
| FR3110602B1 (fr) | 2020-05-20 | 2025-03-07 | Anova Plus | Methode de detection sur le terrain de la presence et de la mutliresistance d’un bio-agresseur, notamment dezymo-septoria tritici,dans des culturescerealieres |
| CN112899346A (zh) * | 2021-01-05 | 2021-06-04 | 南京普济生物有限公司 | 一种降低pcr非特异性扩增的核苷酸及其设计方法与应用 |
| FR3129407B1 (fr) | 2021-11-25 | 2024-12-13 | Anova Plus | Methode de detection de la presence d’un pathogene et determination de ses caracteristiques en sante humaine et animale |
| CN114277103A (zh) * | 2022-01-21 | 2022-04-05 | 杭州飞时达生物科技有限公司 | 一种基于六聚体随机引物高效滚环扩增方法 |
Family Cites Families (15)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20040086880A1 (en) * | 1999-07-20 | 2004-05-06 | Sampson Jeffrey R | Method of producing nucleic acid molecules with reduced secondary structure |
| AU2001216942A1 (en) | 2000-11-24 | 2002-06-03 | Asper Ou | Method of optimising the sequences of synthetic nucleic acids |
| US7993839B2 (en) * | 2001-01-19 | 2011-08-09 | General Electric Company | Methods and kits for reducing non-specific nucleic acid amplification |
| US20020197618A1 (en) * | 2001-01-20 | 2002-12-26 | Sampson Jeffrey R. | Synthesis and amplification of unstructured nucleic acids for rapid sequencing |
| US6617137B2 (en) | 2001-10-15 | 2003-09-09 | Molecular Staging Inc. | Method of amplifying whole genomes without subjecting the genome to denaturing conditions |
| US20030165859A1 (en) * | 2001-10-23 | 2003-09-04 | Invitrogen Corporation | Primers and methods for the detection and discrimination of nucleic acids |
| US7176002B2 (en) | 2002-05-16 | 2007-02-13 | Applera Corporation | Universal-tagged oligonucleotide primers and methods of use |
| EP1426448A1 (en) | 2002-12-03 | 2004-06-09 | bioMérieux BV | Method for lowering the effects of sequence variations in a diagnostic hybridization assay, probe for use in the assay and assay |
| US8871469B1 (en) | 2004-11-13 | 2014-10-28 | Steven Albert Benner | Self-avoiding molecular recognition systems in DNA priming |
| CA2607532C (en) | 2005-04-29 | 2013-03-12 | The J. Craig Venter Institute | Amplification and cloning of single dna molecules using rolling circle amplification |
| EP2032714B1 (en) | 2006-06-01 | 2011-03-16 | TriLink BioTechnologies | Chemically modified oligonucleotide primers for nucleic acid amplification |
| US8460874B2 (en) | 2007-07-03 | 2013-06-11 | Genaphora Ltd. | Use of RNA/DNA chimeric primers for improved nucleic acid amplification reactions |
| JP2010539982A (ja) | 2007-10-01 | 2010-12-24 | アプライド バイオシステムズ， エルエルシー | チェイスライゲーション配列決定法 |
| EP2488664A4 (en) | 2009-10-13 | 2014-04-09 | Syntezza Molecular Detection Israel Ltd | METHOD AND COMPOSITIONS FOR REINFORCING TARGET SEQUENCES FROM NUCLEIC ACID SAMPLES |
| US20110195457A1 (en) | 2010-02-09 | 2011-08-11 | General Electric Company | Isothermal amplification of nucleic acid using primers comprising a randomized sequence and specific primers and uses thereof |
-
2012
- 2012-04-13 US US13/446,474 patent/US9353393B2/en active Active
-
2013
- 2013-02-14 CN CN201380009386.6A patent/CN104093850B/zh active Active
- 2013-02-14 JP JP2014557769A patent/JP6225123B2/ja active Active
- 2013-02-14 CA CA2864676A patent/CA2864676C/en active Active
- 2013-02-14 EP EP13749671.7A patent/EP2814976B1/en active Active
- 2013-02-14 WO PCT/US2013/026136 patent/WO2013123187A1/en not_active Ceased
Also Published As
| Publication number | Publication date |
|---|---|
| JP6225123B2 (ja) | 2017-11-01 |
| CN104093850A (zh) | 2014-10-08 |
| EP2814976A4 (en) | 2015-09-09 |
| EP2814976B1 (en) | 2017-10-18 |
| CA2864676A1 (en) | 2013-08-22 |
| WO2013123187A1 (en) | 2013-08-22 |
| US9353393B2 (en) | 2016-05-31 |
| US20130210078A1 (en) | 2013-08-15 |
| JP2015507930A (ja) | 2015-03-16 |
| CN104093850B (zh) | 2016-12-07 |
| EP2814976A1 (en) | 2014-12-24 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| EEER | Examination request |
Effective date: 20180213 |