CA2861668C - Stimulus-elicited genomic profile markers of a neurodegenerative condition - Google Patents

Stimulus-elicited genomic profile markers of a neurodegenerative condition Download PDF

Info

Publication number
CA2861668C
CA2861668C CA2861668A CA2861668A CA2861668C CA 2861668 C CA2861668 C CA 2861668C CA 2861668 A CA2861668 A CA 2861668A CA 2861668 A CA2861668 A CA 2861668A CA 2861668 C CA2861668 C CA 2861668C
Authority
CA
Canada
Prior art keywords
gene
stimulus
cell sample
cells
expression
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CA2861668A
Other languages
English (en)
French (fr)
Other versions
CA2861668A1 (en
Inventor
Daniel L. Alkon
Tapan Kumar Khan
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
West Virginia University
Original Assignee
West Virginia University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by West Virginia University filed Critical West Virginia University
Publication of CA2861668A1 publication Critical patent/CA2861668A1/en
Application granted granted Critical
Publication of CA2861668C publication Critical patent/CA2861668C/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/5005Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
    • G01N33/5008Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
    • G01N33/502Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects
    • G01N33/5023Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects on expression patterns
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/136Screening for pharmacological compounds
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Microbiology (AREA)
  • Pathology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Hematology (AREA)
  • Urology & Nephrology (AREA)
  • Biophysics (AREA)
  • General Engineering & Computer Science (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Cell Biology (AREA)
  • Toxicology (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
CA2861668A 2011-10-05 2012-10-05 Stimulus-elicited genomic profile markers of a neurodegenerative condition Active CA2861668C (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201161543416P 2011-10-05 2011-10-05
US61/543,416 2011-10-05
PCT/US2012/059137 WO2013052922A1 (en) 2011-10-05 2012-10-05 Stimulus-elicited genomic profile markers of a neurodegenerative condition

Publications (2)

Publication Number Publication Date
CA2861668A1 CA2861668A1 (en) 2013-04-11
CA2861668C true CA2861668C (en) 2021-09-07

Family

ID=47116384

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2861668A Active CA2861668C (en) 2011-10-05 2012-10-05 Stimulus-elicited genomic profile markers of a neurodegenerative condition

Country Status (5)

Country Link
US (1) US20140235496A1 (https=)
EP (1) EP2764120B1 (https=)
JP (2) JP2014528247A (https=)
CA (1) CA2861668C (https=)
WO (1) WO2013052922A1 (https=)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20170023552A1 (en) * 2014-01-03 2017-01-26 Blanchette Rockefeller Neurosciences Institute Convergence of aggregation rate with validated peripheral diagnostic for alzheimer's disease
CN105353135A (zh) * 2015-11-23 2016-02-24 中国人民解放军第三军医大学第一附属医院 阿尔茨海默病标志物的用途
EP3397753B1 (en) * 2015-12-30 2021-10-27 FUJIFILM Cellular Dynamics, Inc. Microtissue formation using stem cell-derived human hepatocytes
EP3600027B1 (en) 2017-03-31 2026-02-18 Neurodiagnostics LLC Lymphocyte-based morphometric test for alzheimer's disease
EP3787613B1 (en) * 2018-04-30 2026-03-11 Cedars-Sinai Medical Center Pkc activation for use in treating early onset sporadic parkinson's disease
WO2022132856A1 (en) * 2020-12-16 2022-06-23 Synaptogenix, Inc. Treatment of amyotrophic lateral sclerosis using pkc activators

Family Cites Families (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6300085B1 (en) 1993-05-03 2001-10-09 The United States Of America As Represented By The Department Of Health And Human Services Diagnostic method for Alzheimer's disease
US5976816A (en) 1993-05-03 1999-11-02 The United States Of America As Represented By The Department Of Health And Human Services Cell tests for alzheimer's disease
WO1997037228A1 (en) * 1996-03-29 1997-10-09 The Trustees Of Boston University Methods for diagnosing and treating alzheimer's disease
US6218122B1 (en) 1998-06-19 2001-04-17 Rosetta Inpharmatics, Inc. Methods of monitoring disease states and therapies using gene expression profiles
EP1934618B1 (en) 2005-10-11 2009-05-13 Blanchette Rockefeller Neurosciences Institute Alzheimer's disease-specific alterations of the erk1/erk2 phosphorylation ratio-alzheimer's disease-specific molecular biomarkers (adsmb)
US20080058396A1 (en) 2006-07-28 2008-03-06 Alkon Daniel L Methods of stimulating cellular growth, synaptic remodelling and consolidation of long-term memory
WO2008077094A2 (en) * 2006-12-19 2008-06-26 Children's Medical Center Corporation Methods for promoting neovascularization
EP2669386A1 (en) * 2008-07-28 2013-12-04 Blanchette Rockefeller Neurosciences Institute Stimulus-elicited genomic profile markers of alzheimer's disease
CA2731171C (en) 2008-07-28 2016-10-18 Blanchette Rockefeller Neurosciences Institute Pkc-activating compounds for the treatment of neurodegenerative diseases
KR101054725B1 (ko) * 2008-07-31 2011-08-05 재단법인서울대학교산학협력재단 세포외기질 성분을 함유하는 노화조절용 조성물 및 이를이용한 노화세포의 노화조절방법
EP2483684B1 (en) * 2009-10-02 2018-04-18 Blanchette Rockefeller Neurosciences, Institute Fibroblast growth patterns to diagnose alzheimer's disease

Also Published As

Publication number Publication date
JP2018046826A (ja) 2018-03-29
EP2764120A1 (en) 2014-08-13
JP6636488B2 (ja) 2020-01-29
EP2764120B1 (en) 2020-06-10
CA2861668A1 (en) 2013-04-11
WO2013052922A1 (en) 2013-04-11
JP2014528247A (ja) 2014-10-27
US20140235496A1 (en) 2014-08-21

Similar Documents

Publication Publication Date Title
JP6636488B2 (ja) 神経変性状態の刺激誘発性ゲノムプロファイルマーカー
Ikegame et al. DNA methylation analysis of BDNF gene promoters in peripheral blood cells of schizophrenia patients
Harris et al. Monocyte chemotactic protein-1 inhibits chondrogenesis of synovial mesenchymal progenitor cells: an in vitro study
EP2326729B1 (en) Stimulus-elicited genomic profile markers of alzheimer's disease
Aung et al. MMP-9 expression is increased in B lymphocytes during multiple sclerosis exacerbation and is regulated by microRNA-320a
JP2015522246A (ja) 特発性肺線維症の予後予測、診断および処置の方法
JP5190654B2 (ja) 分子マーカーを用いた間葉系幹細胞の識別方法及びその利用
Spielbauer et al. Bacterial peptidoglycan signalling in microglia: Activation by MDP via the NF-κB/MAPK pathway
KR20090098941A (ko) 알츠하이머 질환의 검출 절차 및 방법
Nomair et al. Circulating miR-146a-5p and miR-132–3p as potential diagnostic biomarkers in epilepsy
US20120213769A1 (en) Methods of diagnosing amyotrophic lateral sclerosis (als)
Cosma et al. Acute and chronic macrophage differentiation modulates TREM2 in a personalized Alzheimer’s patient-derived assay
WO2018172540A1 (en) Method to predict the progression of alzheimer's disease
Gao et al. The Screening of Piwi-Interacting RNA Biomarkers in Sporadic Parkinson's Disease
Lopez-Rodriguez et al. Microglial and Astrocyte priming in the APP/PS1 model of Alzheimer’s Disease: increased vulnerability to acute inflammation and cognitive deficits
JP2022500087A (ja) エピジェネティックマーカーを使用してせん妄危険性を検出するためのシステムおよび方法
Ritz et al. Identification of inflammatory, metabolic, and cell survival pathways contributing to cerebral small vessel disease by postmortem gene expression microarray
JP7489916B2 (ja) Btnl8を発現するt細胞の検出
US20090286238A1 (en) Methods to Monitor, Diagnose and Identify Biomarkers for Psychotic Disorders
US20090269770A1 (en) Methods for evaluation prognosis and follow-up of drug treatment of psychiatric diseases or disorders
KR101547307B1 (ko) 뇌전증 진단용 바이오마커
Washington et al. Peripheral markers of TBI and blood− brain barrier disruption
Savinetti Specific Signatures in Peripheral Blood Monocytes Stratify Multiple Sclerosis Patients Phenotypes
KR20250163550A (ko) 자폐증 진단 및 치료용 조성물
Szydlowska et al. miR-155-5p and miR-674-3p presence in peripheral blood and white blood cells as potential early biomarkers of temporal lobe epilepsy

Legal Events

Date Code Title Description
EEER Examination request

Effective date: 20171002

MPN Maintenance fee for patent paid

Free format text: FEE DESCRIPTION TEXT: MF (PATENT, 12TH ANNIV.) - STANDARD

Year of fee payment: 12

U00 Fee paid

Free format text: ST27 STATUS EVENT CODE: A-4-4-U10-U00-U101 (AS PROVIDED BY THE NATIONAL OFFICE); EVENT TEXT: MAINTENANCE REQUEST RECEIVED

Effective date: 20240927

U11 Full renewal or maintenance fee paid

Free format text: ST27 STATUS EVENT CODE: A-4-4-U10-U11-U102 (AS PROVIDED BY THE NATIONAL OFFICE); EVENT TEXT: MAINTENANCE FEE PAYMENT DETERMINED COMPLIANT

Effective date: 20240927

Free format text: ST27 STATUS EVENT CODE: A-4-4-U10-U11-U102 (AS PROVIDED BY THE NATIONAL OFFICE); EVENT TEXT: MAINTENANCE FEE PAYMENT PAID IN FULL

Effective date: 20240927

MPN Maintenance fee for patent paid

Free format text: FEE DESCRIPTION TEXT: MF (PATENT, 13TH ANNIV.) - STANDARD

Year of fee payment: 13

U00 Fee paid

Free format text: ST27 STATUS EVENT CODE: A-4-4-U10-U00-U101 (AS PROVIDED BY THE NATIONAL OFFICE); EVENT TEXT: MAINTENANCE REQUEST RECEIVED

Effective date: 20250926

U11 Full renewal or maintenance fee paid

Free format text: ST27 STATUS EVENT CODE: A-4-4-U10-U11-U102 (AS PROVIDED BY THE NATIONAL OFFICE); EVENT TEXT: MAINTENANCE FEE PAYMENT PAID IN FULL

Effective date: 20250926