CA2306446A1 - Methods and products related to genotyping and dna analysis - Google Patents

Methods and products related to genotyping and dna analysis Download PDF

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Publication number
CA2306446A1
CA2306446A1 CA002306446A CA2306446A CA2306446A1 CA 2306446 A1 CA2306446 A1 CA 2306446A1 CA 002306446 A CA002306446 A CA 002306446A CA 2306446 A CA2306446 A CA 2306446A CA 2306446 A1 CA2306446 A1 CA 2306446A1
Authority
CA
Canada
Prior art keywords
snp
rcg
genomic
pcr
genome
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002306446A
Other languages
English (en)
French (fr)
Inventor
John E. Landers
Barbara Jordan
David E. Housman
Alain Charest
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Massachusetts Institute of Technology
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2306446A1 publication Critical patent/CA2306446A1/en
Abandoned legal-status Critical Current

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/172Haplotypes

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Pathology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Oncology (AREA)
  • Hospice & Palliative Care (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Saccharide Compounds (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
CA002306446A 1998-09-25 1999-09-24 Methods and products related to genotyping and dna analysis Abandoned CA2306446A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US10175798P 1998-09-25 1998-09-25
US60/101,757 1998-09-25
PCT/US1999/022283 WO2000018960A2 (en) 1998-09-25 1999-09-24 Methods and products related to genotyping and dna analysis

Publications (1)

Publication Number Publication Date
CA2306446A1 true CA2306446A1 (en) 2000-04-06

Family

ID=22286255

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002306446A Abandoned CA2306446A1 (en) 1998-09-25 1999-09-24 Methods and products related to genotyping and dna analysis

Country Status (7)

Country Link
EP (1) EP1056889B1 (enExample)
JP (1) JP2002525127A (enExample)
AT (1) ATE365811T1 (enExample)
AU (1) AU6163399A (enExample)
CA (1) CA2306446A1 (enExample)
DE (1) DE69936379T2 (enExample)
WO (1) WO2000018960A2 (enExample)

Families Citing this family (23)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6958225B2 (en) 1999-10-27 2005-10-25 Affymetrix, Inc. Complexity management of genomic DNA
WO2001068919A2 (en) 2000-03-10 2001-09-20 Ana-Gen Technologies, Inc. Mutation detection using denaturing gradients
NZ521626A (en) 2000-03-29 2005-09-30 Cambia Methods for genotyping by hybridization analysis
AU9519601A (en) * 2000-05-02 2001-11-12 Centre National De La Recherche Scientifique Identification of genetic markers
US6828098B2 (en) 2000-05-20 2004-12-07 The Regents Of The University Of Michigan Method of producing a DNA library using positional amplification based on the use of adaptors and nick translation
DE60140120D1 (de) 2000-06-14 2009-11-19 Vistagen Inc Toxizitätstypisierung unter verwendung von leberstammzellen
DE10029914A1 (de) * 2000-06-19 2002-01-03 Epigenomics Ag Verfahren zur hochparallelen Analyse von Polymorphismen
US6913879B1 (en) 2000-07-10 2005-07-05 Telechem International Inc. Microarray method of genotyping multiple samples at multiple LOCI
AU2001219299A1 (en) * 2000-11-28 2002-06-11 Genaissance Pharmaceuticals, Inc. Drug target isogenes: polymorphisms in the interleukin 3 (colony-stimulating factor, multiple) gene
WO2002051857A1 (en) * 2000-12-21 2002-07-04 Genaissance Pharmaceuticals, Inc. Drug target isogenes: polymorphisms in the neuropeptide y gene
US7110885B2 (en) 2001-03-08 2006-09-19 Dnaprint Genomics, Inc. Efficient methods and apparatus for high-throughput processing of gene sequence data
US6777187B2 (en) 2001-05-02 2004-08-17 Rubicon Genomics, Inc. Genome walking by selective amplification of nick-translate DNA library and amplification from complex mixtures of templates
US6632611B2 (en) 2001-07-20 2003-10-14 Affymetrix, Inc. Method of target enrichment and amplification
US6872529B2 (en) 2001-07-25 2005-03-29 Affymetrix, Inc. Complexity management of genomic DNA
US20030139466A1 (en) 2001-11-29 2003-07-24 Peritt David L. Methods for pretreating a subject with extracorporeal photopheresis
AUPS115502A0 (en) * 2002-03-18 2002-04-18 Diatech Pty Ltd Assessing data sets
US8725418B2 (en) 2002-03-25 2014-05-13 Janssen Pharmaceutica, N.V. Data mining of SNP databases for the selection of intragenic SNPs
US7335474B2 (en) 2003-09-12 2008-02-26 Perlegen Sciences, Inc. Methods and systems for identifying predisposition to the placebo effect
FR2877013A1 (fr) 2004-10-27 2006-04-28 Assist Publ Hopitaux De Paris Indentification d'une mutation de jak2 impliquee dans la polyglobulie de vaquez
US9388457B2 (en) 2007-09-14 2016-07-12 Affymetrix, Inc. Locus specific amplification using array probes
US9074244B2 (en) 2008-03-11 2015-07-07 Affymetrix, Inc. Array-based translocation and rearrangement assays
WO2015045741A1 (ja) * 2013-09-26 2015-04-02 東洋鋼鈑株式会社 ハイブリダイゼーション用バッファー組成物及びハイブリダイゼーション方法
CN110643717B (zh) * 2019-10-28 2023-04-14 东北农业大学 一种预示和鉴定公鸡心脏生长发育的分子标记方法

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU1414197A (en) * 1996-02-26 1997-09-10 Motorola, Inc. Personal human genome card and methods and systems for producing same
EP0941366A2 (en) * 1996-11-06 1999-09-15 Whitehead Institute For Biomedical Research Biallelic markers

Also Published As

Publication number Publication date
EP1056889A2 (en) 2000-12-06
DE69936379T2 (de) 2008-02-28
DE69936379D1 (de) 2007-08-09
EP1056889B1 (en) 2007-06-27
JP2002525127A (ja) 2002-08-13
WO2000018960A3 (en) 2000-09-08
WO2000018960A2 (en) 2000-04-06
AU6163399A (en) 2000-04-17
ATE365811T1 (de) 2007-07-15

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Legal Events

Date Code Title Description
EEER Examination request
FZDE Discontinued