BRPI1011489A2 - método para seleção de genes candidatos estatisticamente validados. - Google Patents
método para seleção de genes candidatos estatisticamente validados.Info
- Publication number
- BRPI1011489A2 BRPI1011489A2 BRPI1011489A BRPI1011489A BRPI1011489A2 BR PI1011489 A2 BRPI1011489 A2 BR PI1011489A2 BR PI1011489 A BRPI1011489 A BR PI1011489A BR PI1011489 A BRPI1011489 A BR PI1011489A BR PI1011489 A2 BRPI1011489 A2 BR PI1011489A2
- Authority
- BR
- Brazil
- Prior art keywords
- selection
- candidate genes
- statistically validated
- validated candidate
- statistically
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01H—NEW PLANTS OR NON-TRANSGENIC PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
- A01H1/00—Processes for modifying genotypes ; Plants characterised by associated natural traits
- A01H1/02—Methods or apparatus for hybridisation; Artificial pollination ; Fertility
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01H—NEW PLANTS OR NON-TRANSGENIC PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
- A01H1/00—Processes for modifying genotypes ; Plants characterised by associated natural traits
- A01H1/04—Processes of selection involving genotypic or phenotypic markers; Methods of using phenotypic markers for selection
- A01H1/045—Processes of selection involving genotypic or phenotypic markers; Methods of using phenotypic markers for selection using molecular markers
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/40—Population genetics; Linkage disequilibrium
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Physics & Mathematics (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Genetics & Genomics (AREA)
- Medical Informatics (AREA)
- General Health & Medical Sciences (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Biotechnology (AREA)
- Evolutionary Biology (AREA)
- Biophysics (AREA)
- Theoretical Computer Science (AREA)
- Molecular Biology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Analytical Chemistry (AREA)
- Chemical & Material Sciences (AREA)
- Artificial Intelligence (AREA)
- Databases & Information Systems (AREA)
- Environmental Sciences (AREA)
- Botany (AREA)
- Bioethics (AREA)
- Computer Vision & Pattern Recognition (AREA)
- Data Mining & Analysis (AREA)
- Developmental Biology & Embryology (AREA)
- Epidemiology (AREA)
- Evolutionary Computation (AREA)
- Public Health (AREA)
- Software Systems (AREA)
- Ecology (AREA)
- Physiology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US12/367,045 | 2009-02-06 | ||
US12/367,045 US8170805B2 (en) | 2009-02-06 | 2009-02-06 | Method for selecting statistically validated candidate genes |
PCT/US2010/023312 WO2010091248A1 (en) | 2009-02-06 | 2010-02-05 | Method for selecting statistically validated candidate genes |
Publications (2)
Publication Number | Publication Date |
---|---|
BRPI1011489A2 true BRPI1011489A2 (pt) | 2016-03-22 |
BRPI1011489B1 BRPI1011489B1 (pt) | 2021-02-17 |
Family
ID=42084599
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
BRPI1011489-0A BRPI1011489B1 (pt) | 2009-02-06 | 2010-02-05 | método para seleção de genes candidatos estatisticamente validados |
Country Status (8)
Country | Link |
---|---|
US (1) | US8170805B2 (pt) |
EP (1) | EP2399214B1 (pt) |
CN (1) | CN102369531B (pt) |
AU (1) | AU2010210552B2 (pt) |
BR (1) | BRPI1011489B1 (pt) |
CA (1) | CA2750225C (pt) |
ES (1) | ES2757827T3 (pt) |
WO (1) | WO2010091248A1 (pt) |
Families Citing this family (29)
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---|---|---|---|---|
US8504579B1 (en) * | 2010-04-23 | 2013-08-06 | Crimson Corporation | Filtering a data set using trees on a computing device |
US20110296753A1 (en) * | 2010-06-03 | 2011-12-08 | Syngenta Participations Ag | Methods and compositions for predicting unobserved phenotypes (pup) |
WO2013009969A2 (en) * | 2011-07-12 | 2013-01-17 | Carnegie Mellon University | Visual representations of structured association mappings |
CN102492776B (zh) * | 2011-12-16 | 2013-09-04 | 浙江大学 | 基于四交群体的遗传连锁图谱构建方法 |
US20160195514A1 (en) * | 2013-09-03 | 2016-07-07 | Coyne Ip Holdings, Llc | Methods for Genetically Diversified Stimulus-Response Based Gene Association Studies |
CN103632067B (zh) * | 2013-11-07 | 2016-08-17 | 浙江大学 | 一种基于混合线性模型的种子数量性状位点定位方法 |
CN105740649B (zh) * | 2016-01-22 | 2018-06-19 | 浙江大学 | 一种基于混合线性模型的多性状关联分析方法 |
CN106096327B (zh) * | 2016-06-07 | 2018-08-17 | 广州麦仑信息科技有限公司 | 基于Torch监督式深度学习的基因性状识别方法 |
WO2018183746A1 (en) | 2017-03-30 | 2018-10-04 | Monsanto Technology Llc | Systems and methods for use in identifying multiple genome edits and predicting the aggregate effects of the identified genome edits |
CN107142317A (zh) * | 2017-06-02 | 2017-09-08 | 中国水稻研究所 | 一种发掘及验证具有累积效应的水稻株高等位基因的方法 |
CN107315922B (zh) * | 2017-08-07 | 2020-06-23 | 杭州祥音医学检验实验室有限公司 | 计算基因型对表型额外贡献的方法及装置 |
CN108197435B (zh) * | 2018-01-29 | 2022-02-25 | 绥化学院 | 一种基于标记位点基因型含有误差的多性状多区间定位方法 |
WO2019243969A1 (en) * | 2018-06-19 | 2019-12-26 | Ancestry.Com Dna, Llc | Filtering genetic networks to discover populations of interest |
CN109378037B (zh) * | 2018-10-31 | 2023-04-14 | 中国石油大学(华东) | 基于遗传学规律的等位基因准确推断方法 |
CN109817281B (zh) * | 2019-01-23 | 2022-12-23 | 湖南农业大学 | 基因组品种构成的估计方法、装置及电子设备 |
CN109680078A (zh) * | 2019-02-22 | 2019-04-26 | 华中农业大学 | 利用snp位点选择信号梯度变化指数评估经济性状候选基因的方法 |
CN109694924A (zh) * | 2019-03-07 | 2019-04-30 | 山东省花生研究所 | 一种有效锚定花生数量性状候选基因区域的方法 |
WO2020197891A1 (en) * | 2019-03-28 | 2020-10-01 | Monsanto Technology Llc | Methods and systems for use in implementing resources in plant breeding |
CN110010203B (zh) * | 2019-03-29 | 2022-05-27 | 广州基迪奥生物科技有限公司 | 一种基于生物云平台的交互式动态qtl分析系统及方法 |
CN110459265B (zh) * | 2019-08-14 | 2022-07-05 | 中国农业科学院作物科学研究所 | 一种提高全基因组预测准确性的方法 |
US11636951B2 (en) | 2019-10-02 | 2023-04-25 | Kpn Innovations, Llc. | Systems and methods for generating a genotypic causal model of a disease state |
CN111199773B (zh) * | 2020-01-20 | 2023-03-28 | 中国农业科学院北京畜牧兽医研究所 | 一种精细定位性状关联基因组纯合片段的评估方法 |
CN111613271B (zh) * | 2020-04-26 | 2023-02-14 | 西南大学 | 一种预测畜禽数量性状显性遗传效应的方法及应用 |
CN111883205B (zh) * | 2020-07-14 | 2023-10-20 | 云南省烟草农业科学研究院 | 一种基于全基因组选择烟草有害成分预测方法及应用 |
CN111863127B (zh) * | 2020-07-17 | 2023-06-16 | 北京林业大学 | 一种构建植物转录因子对靶基因遗传调控网络的方法 |
CN113066530B (zh) * | 2021-03-31 | 2024-05-10 | 江苏省农业科学院 | 一种批量合并eQTL分析结果中存在连锁不平衡SNP的方法 |
CN114637712B (zh) * | 2022-03-18 | 2023-03-10 | 无锡众星微系统技术有限公司 | 一种EDFB模式下SAS2SATA Bridge的错误处理方法和装置 |
CN114898809B (zh) * | 2022-04-11 | 2022-12-23 | 中国科学院数学与系统科学研究院 | 适用复杂性状的基因-环境交互的分析方法及存储介质 |
CN116564410A (zh) * | 2023-05-23 | 2023-08-08 | 浙江大学 | 一种预测突变位点顺式调控基因的方法、设备和介质 |
Family Cites Families (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5569588A (en) | 1995-08-09 | 1996-10-29 | The Regents Of The University Of California | Methods for drug screening |
AU2003303502A1 (en) | 2002-12-27 | 2004-07-29 | Rosetta Inpharmatics Llc | Computer systems and methods for associating genes with traits using cross species data |
CN1434131A (zh) * | 2003-02-20 | 2003-08-06 | 邓红文 | IL-6基因中与中国人群腰椎骨密度连锁的BsrBI分子标记 |
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2009
- 2009-02-06 US US12/367,045 patent/US8170805B2/en active Active
-
2010
- 2010-02-05 ES ES10704279T patent/ES2757827T3/es active Active
- 2010-02-05 WO PCT/US2010/023312 patent/WO2010091248A1/en active Application Filing
- 2010-02-05 BR BRPI1011489-0A patent/BRPI1011489B1/pt active IP Right Grant
- 2010-02-05 CA CA2750225A patent/CA2750225C/en active Active
- 2010-02-05 EP EP10704279.8A patent/EP2399214B1/en active Active
- 2010-02-05 AU AU2010210552A patent/AU2010210552B2/en active Active
- 2010-02-05 CN CN201080015488.5A patent/CN102369531B/zh active Active
Also Published As
Publication number | Publication date |
---|---|
WO2010091248A1 (en) | 2010-08-12 |
EP2399214A1 (en) | 2011-12-28 |
BRPI1011489B1 (pt) | 2021-02-17 |
US20100204921A1 (en) | 2010-08-12 |
CA2750225A1 (en) | 2010-08-12 |
EP2399214B1 (en) | 2019-09-11 |
CA2750225C (en) | 2017-05-16 |
AU2010210552A1 (en) | 2011-08-11 |
AU2010210552B2 (en) | 2016-01-28 |
ES2757827T3 (es) | 2020-04-30 |
CN102369531A (zh) | 2012-03-07 |
CN102369531B (zh) | 2015-03-18 |
US8170805B2 (en) | 2012-05-01 |
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Legal Events
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B06F | Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette] | ||
B06U | Preliminary requirement: requests with searches performed by other patent offices: procedure suspended [chapter 6.21 patent gazette] | ||
B06A | Patent application procedure suspended [chapter 6.1 patent gazette] | ||
B09A | Decision: intention to grant [chapter 9.1 patent gazette] | ||
B16A | Patent or certificate of addition of invention granted [chapter 16.1 patent gazette] |
Free format text: PRAZO DE VALIDADE: 10 (DEZ) ANOS CONTADOS A PARTIR DE 17/02/2021, OBSERVADAS AS CONDICOES LEGAIS. |