BRPI0922688A2 - validação estatística de genes candidatos - Google Patents

validação estatística de genes candidatos

Info

Publication number
BRPI0922688A2
BRPI0922688A2 BRPI0922688A BRPI0922688A BRPI0922688A2 BR PI0922688 A2 BRPI0922688 A2 BR PI0922688A2 BR PI0922688 A BRPI0922688 A BR PI0922688A BR PI0922688 A BRPI0922688 A BR PI0922688A BR PI0922688 A2 BRPI0922688 A2 BR PI0922688A2
Authority
BR
Brazil
Prior art keywords
candidate genes
statistical validation
validation
statistical
genes
Prior art date
Application number
BRPI0922688A
Other languages
English (en)
Inventor
Wang Daolong
Andres Gutierrez Rojas Libardo
Federico Martin Nicolas
Krishna Kishore Venkata
Original Assignee
Syngenta Participations Ag
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Syngenta Participations Ag filed Critical Syngenta Participations Ag
Publication of BRPI0922688A2 publication Critical patent/BRPI0922688A2/pt

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40—Population genetics; Linkage disequilibrium

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Chemical & Material Sciences (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Bioethics (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Data Mining & Analysis (AREA)
  • Databases & Information Systems (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
BRPI0922688A 2008-12-04 2009-12-04 validação estatística de genes candidatos BRPI0922688A2 (pt)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US12/328,689 US20100145624A1 (en) 2008-12-04 2008-12-04 Statistical validation of candidate genes
PCT/US2009/066697 WO2010065811A1 (en) 2008-12-04 2009-12-04 Statistical validation of candiate genes

Publications (1)

Publication Number Publication Date
BRPI0922688A2 true BRPI0922688A2 (pt) 2019-09-24

Family

ID=41664940

Family Applications (1)

Application Number Title Priority Date Filing Date
BRPI0922688A BRPI0922688A2 (pt) 2008-12-04 2009-12-04 validação estatística de genes candidatos

Country Status (8)

Country Link
US (1) US20100145624A1 (pt)
EP (1) EP2356603A1 (pt)
CN (1) CN102334123A (pt)
AR (1) AR074547A1 (pt)
AU (1) AU2009322256A1 (pt)
BR (1) BRPI0922688A2 (pt)
CA (1) CA2745257A1 (pt)
WO (1) WO2010065811A1 (pt)

Families Citing this family (20)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8483972B2 (en) 2009-04-13 2013-07-09 Canon U.S. Life Sciences, Inc. System and method for genotype analysis and enhanced monte carlo simulation method to estimate misclassification rate in automated genotyping
US20100287189A1 (en) * 2009-05-05 2010-11-11 Pioneer Hi-Bred International, Inc. Acceleration of tag placement using custom hardware
US20110296753A1 (en) * 2010-06-03 2011-12-08 Syngenta Participations Ag Methods and compositions for predicting unobserved phenotypes (pup)
EP2434411A1 (en) * 2010-09-27 2012-03-28 Qlucore AB Computer-implemented method for analyzing multivariate data
US8874420B2 (en) * 2010-11-30 2014-10-28 Syngenta Participations Ag Methods for increasing genetic gain in a breeding population
AU2013203272C1 (en) * 2012-06-01 2019-01-17 Agriculture Victoria Services Pty Ltd Novel organisms
KR20140030775A (ko) * 2012-09-03 2014-03-12 한국전자통신연구원 테라헤르츠 파를 이용한 비파괴 작물 생육 진단 장치 및 방법
CN103150147B (zh) * 2013-02-20 2015-07-08 中南大学 一种基于GPU的LD tagSNPs并行选择方法
CN104017866A (zh) * 2014-05-23 2014-09-03 遵义市李龙基葡萄种植农民专业合作社 一种葡萄育种方法
EP3641531A1 (en) * 2017-06-22 2020-04-29 Aalto University Foundation sr Method and system for selecting a plant variety
AU2018380430A1 (en) 2017-12-10 2020-06-18 Monsanto Technology Llc Methods and systems for identifying hybrids for use in plant breeding
WO2020227696A1 (en) * 2019-05-08 2020-11-12 X Development Llc Methods and compositions for governing phenotypic outcomes in plants
CN110208248B (zh) * 2019-06-28 2021-11-19 南京林业大学 一种辨识拉曼光谱异常测量信号的方法
US11636951B2 (en) 2019-10-02 2023-04-25 Kpn Innovations, Llc. Systems and methods for generating a genotypic causal model of a disease state
CN111199773B (zh) * 2020-01-20 2023-03-28 中国农业科学院北京畜牧兽医研究所 一种精细定位性状关联基因组纯合片段的评估方法
CN112102880A (zh) * 2020-10-19 2020-12-18 北京诺禾致源科技股份有限公司 品种鉴定的方法、其预测模型的构建方法和装置
CN112687340A (zh) * 2020-12-17 2021-04-20 河南省农业科学院粮食作物研究所 一种基于全基因组关联分析和全基因组选择选育玉米高产材料的方法
CN113539357B (zh) * 2021-06-10 2024-04-30 阿里巴巴达摩院(杭州)科技有限公司 基因检测方法、模型训练方法、装置、设备及系统
CN114974413B (zh) * 2022-05-17 2023-05-05 哈尔滨学院 父母子三元亲属结构的候选区域基因关联检测系统及方法
CN117821650B (zh) * 2024-01-11 2024-06-11 武汉市农业科学院 一种芋全基因组SNP-Panel及其应用

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1042507B1 (en) * 1997-12-22 2008-04-09 Pioneer-Hi-Bred International, Inc. Qtl mapping in plant breeding populations
US20080163824A1 (en) * 2006-09-01 2008-07-10 Innovative Dairy Products Pty Ltd, An Australian Company, Acn 098 382 784 Whole genome based genetic evaluation and selection process

Also Published As

Publication number Publication date
CA2745257A1 (en) 2010-06-10
EP2356603A1 (en) 2011-08-17
AR074547A1 (es) 2011-01-26
WO2010065811A1 (en) 2010-06-10
AU2009322256A1 (en) 2010-06-10
CN102334123A (zh) 2012-01-25
US20100145624A1 (en) 2010-06-10

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Legal Events

Date Code Title Description
B08F Application dismissed because of non-payment of annual fees [chapter 8.6 patent gazette]
B08K Patent lapsed as no evidence of payment of the annual fee has been furnished to inpi [chapter 8.11 patent gazette]

Free format text: EM VIRTUDE DO ARQUIVAMENTO PUBLICADO NA RPI 2543 DE 01-10-2019 E CONSIDERANDO AUSENCIA DE MANIFESTACAO DENTRO DOS PRAZOS LEGAIS, INFORMO QUE CABE SER MANTIDO O ARQUIVAMENTO DO PEDIDO DE PATENTE, CONFORME O DISPOSTO NO ARTIGO 12, DA RESOLUCAO 113/2013.