BR112018008541A2 - método implementado por computador para determinar uma rota de transmissão de patógenos relacionados, mídia de armazenamento não transitório legível por computador e sistema implementado por computador para pré-formar uma análise de genoma - Google Patents

método implementado por computador para determinar uma rota de transmissão de patógenos relacionados, mídia de armazenamento não transitório legível por computador e sistema implementado por computador para pré-formar uma análise de genoma

Info

Publication number
BR112018008541A2
BR112018008541A2 BR112018008541A BR112018008541A BR112018008541A2 BR 112018008541 A2 BR112018008541 A2 BR 112018008541A2 BR 112018008541 A BR112018008541 A BR 112018008541A BR 112018008541 A BR112018008541 A BR 112018008541A BR 112018008541 A2 BR112018008541 A2 BR 112018008541A2
Authority
BR
Brazil
Prior art keywords
computer
storage media
transmission path
readable non
preforming
Prior art date
Application number
BR112018008541A
Other languages
English (en)
Inventor
Arthur Andrew
David Gross Brian
Lin Henry
Dutta Pradyumna
Babaeizadeh Saeed
Chou Thomas
Original Assignee
Koninklijke Philips Nv
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Koninklijke Philips Nv filed Critical Koninklijke Philips Nv
Publication of BR112018008541A2 publication Critical patent/BR112018008541A2/pt

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F17/00Digital computing or data processing equipment or methods, specially adapted for specific functions
    • G06F17/10Complex mathematical operations
    • G06F17/18Complex mathematical operations for evaluating statistical data, e.g. average values, frequency distributions, probability functions, regression analysis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B10/00ICT specially adapted for evolutionary bioinformatics, e.g. phylogenetic tree construction or analysis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10Sequence alignment; Homology search
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20Supervised data analysis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00ICT programming tools or database systems specially adapted for bioinformatics

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Theoretical Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Data Mining & Analysis (AREA)
  • General Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Mathematical Physics (AREA)
  • Computational Mathematics (AREA)
  • Mathematical Analysis (AREA)
  • Mathematical Optimization (AREA)
  • Pure & Applied Mathematics (AREA)
  • Software Systems (AREA)
  • Databases & Information Systems (AREA)
  • Physiology (AREA)
  • Animal Behavior & Ethology (AREA)
  • Probability & Statistics with Applications (AREA)
  • Algebra (AREA)
  • Operations Research (AREA)
  • Artificial Intelligence (AREA)

Abstract

são fornecidos métodos, sistemas e processos implementados por computador para determinar uma métrica de transmissão ou uma rota de transmissão de patógenos relacionados. é fornecida também uma mídia de armazenamento não transitório legível por computador, com um programa executável nela armazenado, sendo esse programa configurado para instruir um microprocessador a gerar uma rota de transmissão de patógenos relacionados.
BR112018008541A 2015-10-30 2016-10-28 método implementado por computador para determinar uma rota de transmissão de patógenos relacionados, mídia de armazenamento não transitório legível por computador e sistema implementado por computador para pré-formar uma análise de genoma BR112018008541A2 (pt)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201562248555P 2015-10-30 2015-10-30
PCT/IB2016/056497 WO2017072707A1 (en) 2015-10-30 2016-10-28 Methods, systems and processes of determining transmission paths of infectious agents

Publications (1)

Publication Number Publication Date
BR112018008541A2 true BR112018008541A2 (pt) 2018-10-30

Family

ID=57345992

Family Applications (1)

Application Number Title Priority Date Filing Date
BR112018008541A BR112018008541A2 (pt) 2015-10-30 2016-10-28 método implementado por computador para determinar uma rota de transmissão de patógenos relacionados, mídia de armazenamento não transitório legível por computador e sistema implementado por computador para pré-formar uma análise de genoma

Country Status (7)

Country Link
US (1) US20180314793A1 (pt)
EP (1) EP3369022A1 (pt)
JP (1) JP6949837B2 (pt)
CN (1) CN108475297B (pt)
BR (1) BR112018008541A2 (pt)
RU (1) RU2018120004A (pt)
WO (1) WO2017072707A1 (pt)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP7256171B2 (ja) * 2017-08-21 2023-04-11 コーニンクレッカ フィリップス エヌ ヴェ リアルタイム位置特定システム及び次世代シーケンスを使用した、医療施設内での感染伝播の予測、防止及び制御
US20200357491A1 (en) * 2017-12-14 2020-11-12 Koninklijke Philips N.V. Methodology for measuring the quality of phylogenetic and transmission trees and for merging trees
US20190252078A1 (en) * 2018-02-15 2019-08-15 X Development Llc Predicting the spread of contagions
US11023467B2 (en) 2018-07-02 2021-06-01 Baxter International Inc. Graph database for outbreak tracking and management
EP3608912A1 (de) * 2018-08-06 2020-02-12 Siemens Healthcare GmbH Ermitteln einer substanzklasse eines nosokomialen keims
US11961594B2 (en) 2019-06-28 2024-04-16 Koninklijke Philips N.V. System and method using clinical data to predict genetic relatedness for the efficient management and reduction of healthcare-associated infections
US10671632B1 (en) * 2019-09-03 2020-06-02 Cb Therapeutics, Inc. Automated pipeline
US12002224B2 (en) * 2020-03-27 2024-06-04 Hs Vk Idea Factory Llc Apparatus and method for protecting against environmental hazards
CN114495341B (zh) * 2020-04-07 2023-05-12 西安艾润物联网技术服务有限责任公司 访客管理方法、设备、系统及计算机可读存储介质
CN111540476B (zh) * 2020-04-20 2020-12-01 中国科学院地理科学与资源研究所 一种基于手机信令数据的呼吸道传染病传染树重构方法
CN111524613B (zh) * 2020-04-27 2023-05-09 腾讯科技(深圳)有限公司 基于区块链的用户行为轨迹信息采集方法、装置和设备
CN113470835B (zh) * 2021-07-21 2023-01-24 医渡云(北京)技术有限公司 传染病的传播路径确定方法、装置、存储介质与电子设备
WO2023122363A1 (en) * 2021-12-23 2023-06-29 Illumina Software, Inc. Dynamic graphical status summaries for nucelotide sequencing
CN115587593B (zh) * 2022-06-16 2023-06-13 中关村科学城城市大脑股份有限公司 信息抽取方法、装置、电子设备和计算机可读介质

Family Cites Families (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020120408A1 (en) * 2000-09-06 2002-08-29 Kreiswirth Barry N. System and method for tracking and controlling infections
JP2004234459A (ja) * 2003-01-31 2004-08-19 Nagase & Co Ltd 治療指標情報提供サーバ、治療指標情報提供方法、プログラム及び該プログラムを記録した記録媒体
US7279684B2 (en) * 2005-12-13 2007-10-09 Huber Engineered Woods Llc Method using NIR spectroscopy to monitor components of engineered wood products
JP5265661B2 (ja) * 2007-04-02 2013-08-14 カーン,カムラン 民間飛行機旅行を介した感染性病原菌の世界的拡散を予測するためのシステムおよび方法
JP5189906B2 (ja) * 2007-09-14 2013-04-24 国立大学法人群馬大学 菌の異常集積検出方法および装置、並びに菌異常集積検出の警告スコア累積のグラフ化方法および装置
CN103069010B (zh) * 2010-04-23 2016-02-24 基因组影像公司 通过由分子梳检测基因组和感染性病毒dna的病毒感染的诊断
CN102063571A (zh) * 2010-12-30 2011-05-18 中国科学院深圳先进技术研究院 基于网格的传染源查找方法及系统
JP6116264B2 (ja) * 2013-01-29 2017-04-19 ケーディーアイコンズ株式会社 情報処理装置及びプログラム
CN106663148B (zh) 2014-08-14 2021-03-26 皇家飞利浦有限公司 用于跟踪和识别感染传送的系统和方法
US20170228497A1 (en) 2014-09-29 2017-08-10 Koninklijke Philips N.V. Systems and methods for identifying and flagging samples of concern
WO2016142493A1 (en) 2015-03-12 2016-09-15 Koninklijke Philips N.V. Infection management and control
US11264118B2 (en) 2015-03-12 2022-03-01 Koninklijke Philips N.V. Methods of displaying the antimicrobial sensitivity of biological isolates

Also Published As

Publication number Publication date
CN108475297B (zh) 2022-04-29
CN108475297A (zh) 2018-08-31
RU2018120004A (ru) 2019-12-02
US20180314793A1 (en) 2018-11-01
JP6949837B2 (ja) 2021-10-13
WO2017072707A1 (en) 2017-05-04
JP2019502188A (ja) 2019-01-24
RU2018120004A3 (pt) 2020-04-28
EP3369022A1 (en) 2018-09-05

Similar Documents

Publication Publication Date Title
BR112018008541A2 (pt) método implementado por computador para determinar uma rota de transmissão de patógenos relacionados, mídia de armazenamento não transitório legível por computador e sistema implementado por computador para pré-formar uma análise de genoma
CL2017002005A1 (es) Aparato y método para control de navegación
BR112017016080A2 (pt) polinucleotídeo, sistema crispr, dois polinucleotídeos e métodos de modificação de uma molécula, de redução de modificação fora do alvo e de aumento da modificação específica de alvo
BR112018002848A2 (pt) método, aparelho, mídia de armazenamento não transitório, programa de computador, kit para medir níveis de expressão de seis ou mais genes-alvo da via de sinalização celular
BR112017002079A2 (pt) continuidade de tarefa de dispositivos cruzados
BR122022007092B8 (pt) Método para construir um perfil de dna, método para construir uma biblioteca de ácido nucléico, biblioteca de ácido nucléico, pluralidade de iniciadores e kit
GB2544001A (en) Methods for increasing Cas9-mediated engineering efficiency
EA201691137A1 (ru) Шахтное транспортное средство и способ инициирования задачи горных работ
GB2539344A (en) Partition mobility for partition with extended code
BR112016014491A2 (pt) Dispositivo e método de controle, e, programa de computador
AR101943A1 (es) Métodos para detección de patógenos y control de enfermedades en carnes, plantas o partes de plantas
CL2014001842A1 (es) Separación de dióxido de carbono que implica procesos termolíticos basados en dos sales.
CY1122975T1 (el) Συνθεσεις και μεθοδοι για την αναστολη της εκφρασης του γονιδιου alas1
GB2540702A (en) Nucleic acid processing of a nucleic acid fragment with a triazole linkage
BR112016006312A2 (pt) método e kit para determinar a presença ou ausência de staphylococcus aureus resistente à meticilina em uma amostra biológica
BR112014032892A2 (pt) processo de amplificação por rcp e de detecção de pelo menos uma sequência-alvo nucleotídica, dispositivo de amplificação e de detecção rápida de pelo menos uma sequência-alvo nucleotídica e estojo de amplificação por rcp e de detecção de pelo menos uma sequência nucleotídica-alvo
BR112017024702A2 (pt) detecção de ácidos nucleicos-alvo e variantes
BR112016019021A2 (pt) sistema de geolocalização para identificar uma localização de uma fonte de emissão, e, método para a localização de uma fonte de emissão.
BR112017009953B8 (pt) Sistema de produção de energia e método para controle automatizado de um sistema de produção de energia
BR112016030948A2 (pt) Método para simulação do tempo necessário para executar uma operação marítima restrita ao clima
CL2014002632A1 (es) Sistema para entrenamiento de un operador, que incluye una unidad de procesamiento y un medio legible por ordenador con simulador, en que la aplicación de simulador está configurada para generar un ambiente de trabajo simulado, recibir una primera serie de comandos de operación, calcular un camino óptimo, generar un indicador que representa al menos una parte del camino óptimo, mostrar el indicador, recibir segunda serie de comandos, modificar automáticamente el indicador; método; medio legible
CL2018000907A1 (es) Controlador de dispositivo de compresión; método; sistema
BR112016030088A2 (pt) sistema para uma máquina de escavação
CL2014001406A1 (es) Un metodo de deteccion homogeneo para un proceso de pcr usando fret que detecta la presencia o ausencia de un snp de haahasll-a122(at)t dentro del gen haahasll.
BR112019000188A2 (pt) método implementado por computador, meio não transitório, legível por computador e sistema implementado por computador

Legal Events

Date Code Title Description
B11A Dismissal acc. art.33 of ipl - examination not requested within 36 months of filing
B11Y Definitive dismissal - extension of time limit for request of examination expired [chapter 11.1.1 patent gazette]