WO2024109611A1 - Mutant respiratory syncytial virus pre-fusion f protein and use thereof - Google Patents
Mutant respiratory syncytial virus pre-fusion f protein and use thereof Download PDFInfo
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- WO2024109611A1 WO2024109611A1 PCT/CN2023/131875 CN2023131875W WO2024109611A1 WO 2024109611 A1 WO2024109611 A1 WO 2024109611A1 CN 2023131875 W CN2023131875 W CN 2023131875W WO 2024109611 A1 WO2024109611 A1 WO 2024109611A1
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- respiratory syncytial
- syncytial virus
- protein
- mutant
- prefusion
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Classifications
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/005—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K39/12—Viral antigens
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
- A61P31/14—Antivirals for RNA viruses
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/08—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
- C07K16/10—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
- C07K16/1027—Paramyxoviridae, e.g. respiratory syncytial virus
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/569—Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
- G01N33/56983—Viruses
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2760/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssRNA viruses negative-sense
- C12N2760/00011—Details
- C12N2760/18011—Paramyxoviridae
- C12N2760/18511—Pneumovirus, e.g. human respiratory syncytial virus
- C12N2760/18522—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/005—Assays involving biological materials from specific organisms or of a specific nature from viruses
- G01N2333/08—RNA viruses
- G01N2333/115—Paramyxoviridae, e.g. parainfluenza virus
- G01N2333/135—Respiratory syncytial virus
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2469/00—Immunoassays for the detection of microorganisms
- G01N2469/10—Detection of antigens from microorganism in sample from host
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2469/00—Immunoassays for the detection of microorganisms
- G01N2469/20—Detection of antibodies in sample from host which are directed against antigens from microorganisms
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Definitions
- the present disclosure relates to the field of bioengineering technology, and in particular to a mutant respiratory syncytial virus pre-fusion F protein and an application thereof.
- Respiratory syncytial virus is an important pathogen that causes lower respiratory tract infections in infants, the elderly, and immunocompromised patients.
- RSV Respiratory syncytial virus
- the elderly are at higher risk of developing serious diseases due to decreased immunity and underlying diseases.
- the WHO estimates that 64 million children are infected with RSV worldwide each year, of which 150,000 children die from RSV infection, and 99% of deaths occur in low- and middle-income countries, causing a very serious global medical burden. It is estimated that the global direct medical costs related to RSV were 4.82 billion euros in 2017.
- RSV infection can lead to serious complications, including bronchiolitis or pneumonia, often accompanied by acute respiratory distress, requiring hospitalization. Natural RSV infection does not induce long-term immune protection and can be recurrent.
- Palivizumab monoclonal antibody product
- the present disclosure provides a mutant respiratory syncytial virus prefusion F protein, wherein the mutant respiratory syncytial virus prefusion F protein has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein:
- amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, wherein the amino acid residue length of the connecting peptide is at least 2;
- the amino acid sequence of the wild-type respiratory syncytial virus pre-fusion F protein is shown in SEQ ID No.01.
- the cysteine substitution comprises at least one of S55C, T189C, P101C or V152C.
- cysteine substitutions include S55C and T189C, and/or, P101C and V152C.
- amino acid residues 104 to 137 of the wild-type respiratory syncytial virus pre-fusion F protein are completely replaced by a connecting peptide.
- amino acid sequence of the connecting peptide is GSGSGGSGSGRS.
- amino acid residues 104 to 144 of the wild-type respiratory syncytial virus pre-fusion F protein are all replaced by a connecting peptide, and the amino acid sequence of the connecting peptide is GSGSGRS or GS.
- biomaterial comprising any one of the following (a) to (d):
- the mammalian cell is selected from Chinese hamster ovary cells, tumor cells, BHK cells or HEK293 cells;
- the present disclosure provides a method for preparing the mutant respiratory syncytial virus pre-fusion F protein, which comprises culturing the aforementioned transformed cells or recombinant viruses, and inducing expression to obtain the mutant respiratory syncytial virus pre-fusion F protein.
- the medicament comprises a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine;
- the diagnostic reagent is used for diagnosing respiratory syncytial virus infection.
- the present disclosure provides a drug for preventing and/or treating respiratory syncytial virus infection, comprising the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material or the respiratory syncytial virus-specific antibody described in (a);
- the drug includes a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- the present disclosure provides a pharmaceutical composition, which comprises the mutant respiratory syncytial virus pre-fusion F protein, the biological material or the respiratory syncytial virus-specific antibody described in (a); and a pharmaceutically acceptable carrier.
- the present disclosure provides a respiratory syncytial virus diagnostic reagent, comprising the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
- the present disclosure provides a method for preventing and/or treating respiratory syncytial virus infection, the method comprising administering a therapeutically effective amount of the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody to a patient in need thereof;
- the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- the present disclosure provides a method for diagnosing respiratory syncytial virus infection, comprising the step of using the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
- the present disclosure provides the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody for use in preventing and/or treating respiratory syncytial virus infection;
- the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- the present disclosure provides the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody, for use in diagnosing respiratory syncytial virus infection.
- FIG1 is a plasmid map of the pEE12.4 expression vector used in the embodiments of the present disclosure.
- FIG2 shows the binding of each mutant antigen to six different monoclonal antibodies (indirect ELISA).
- FIG3 shows the binding of three connecting peptides to five monoclonal antibodies (indirect ELISA);
- Figure 4 shows the reducing SDS-PAGE (left) and Western Blot (right) of the purified antigen
- Fig. 5 is a graph showing HPLC detection of the purified antigen
- FIG6 shows the binding of the dual-factor mutant antigen to the AM14 monoclonal antibody (indirect ELISA).
- FIG. 7 is a turbidity point analysis graph of YD22-1 and SC-TM.
- Respiratory Syncytial Virus (RSV) infection is mainly mediated by glycoproteins F and G.
- Adhesion protein (G) adheres to the host cell membrane, promoting the adsorption of the virus on the cell surface.
- Fusion protein (F) mediates the fusion of the viral envelope and the host cell membrane, allowing the virus to enter the cell.
- pre-F metastable pre-fusion conformation
- post-F stable post-fusion conformation
- RSV F protein belongs to type I fusion protein, which mainly includes the following functional regions: signal peptide (1-26aa) located at the N-terminus of F protein, responsible for guiding F protein to the cell membrane surface; two furin cleavage sites, protease recognition sites mainly composed of basic amino acids, namely cleavage site 1 (KKRKRR, FCS1) and cleavage site 2 (RARR, FCS2); fusion peptide FP (137-146aa) composed of 19 amino acids, when the trimer of F protein is activated, the fusion peptide is responsible for inserting into the cell membrane of adjacent cells; heptad repeat region HRA (146-216aa) and HRB (460-514aa), During membrane fusion, HRA and HRB form a stable 6HB structure; the transmembrane region (514-574aa), the region where the F protein is embedded in the membrane; the CT region, the region where the F protein is located in the cytoplasm, which can interact with the viral
- the F protein is first synthesized as a protein precursor F0. During the cell fusion process, it is cleaved by furin to release a 27-amino acid polypeptide pep27 (109-127aa), forming F1 and F2 fragments connected by disulfide bonds, and transforming from an unstable pre-fusion conformation to a stable post-fusion conformation.
- a 27-amino acid polypeptide pep27 109-127aa
- F1 and F2 fragments connected by disulfide bonds and transforming from an unstable pre-fusion conformation to a stable post-fusion conformation.
- Comparison of the RSV F protein structure before and after fusion showed that most of the secondary and tertiary structures were retained in the pre-fusion and post-fusion states. In contrast, the N-terminal and C-terminal regions of the F1 subunit showed obvious conformational changes.
- the fusion peptide and five secondary structural elements ( ⁇ 2, ⁇ 3, ⁇ 4 helices and ⁇ 3, ⁇ 4 folds) at the N-terminal end of the F1 subunit were rearranged and fused with the ⁇ 5 helix to form a length >
- the only parallel strand ( ⁇ 22) spreads out, allowing the pre-fusion ⁇ 10 helix to move toward the ⁇ 5post helix to promote membrane fusion.
- the ideal design of a pre-fusion conformation F protein mutant should have the following characteristics: (1) Maintaining the pre-fusion conformation of the F protein trimer to obtain the correct neutralizing epitope; (2) High expression levels of the trimer protein to induce sufficient immune response and meet the needs of industrial manufacturing, that is, the F protein should have efficient expression and self-assembly capabilities; (3) Having a highly stabilized trimer conformation to continuously maintain the pre-fusion conformation, maintain the original or higher immune activity, and meet the needs of production preparations.
- the present disclosure provides a mutant respiratory syncytial virus prefusion F protein, and it is expected that the mutant protein can have a stable prefusion conformation and high expression level, and can form a stable trimer, so that it can be used for the prevention, diagnosis and treatment of respiratory syncytial virus infection.
- the present disclosure provides a mutant respiratory syncytial virus prefusion F protein, wherein the mutant respiratory syncytial virus prefusion F protein has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein:
- amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, wherein the amino acid residue length of the connecting peptide is at least 2;
- the amino acid sequence of the wild-type respiratory syncytial virus pre-fusion F protein is shown in SEQ ID No.01.
- partial or complete replacement means that the amino acid residues 104 to 144 of the wild-type respiratory syncytial virus pre-fusion F protein can be completely replaced or some fragments thereof can be partially replaced, including but not limited to "positions 104 to 110", “positions 104 to 120", “positions 104 to 130", “positions 104 to 137", “positions 110 to 130” or “positions 120 to 144".
- the cysteine substitution comprises at least one of S55C, T189C, P101C or V152C.
- cysteine substitutions include S55C and T189C, and/or, P101C and V152C.
- cysteine substitution includes S55C and T189C, which means that the two substitutions S55C and T189C exist at the same time, but it does not mean that the two substituted cysteines must form a disulfide bond connection. It is understandable that the two substituted cysteines can form a disulfide bond connection.
- cysteine substitution includes P101C and V152C, which means that the two substitutions P101C and V152C exist at the same time, but it does not mean that the two substituted cysteines must form a disulfide bond connection. It is understandable that the two substituted cysteines can form a disulfide bond connection.
- amino acid residues 104 to 137 of the wild-type respiratory syncytial virus prefusion F protein are completely replaced by a connecting peptide.
- the amino acid sequence of the connecting peptide is GSGSGGSGSGRS.
- amino acid residues 104 to 144 of the wild-type respiratory syncytial virus pre-fusion F protein are all replaced by a connecting peptide, and the amino acid sequence of the connecting peptide is GSGSGRS or GS.
- biomaterial which comprises any one of the following (a) to (d):
- the mammalian cell is selected from Chinese hamster ovary cells (CHO), tumor cells, BHK cells or HEK293 cells.
- CHO Chinese hamster ovary cells
- tumor cells BHK cells or HEK293 cells.
- the present disclosure provides a method for preparing the mutant respiratory syncytial virus pre-fusion F protein as described in any of the aforementioned embodiments, the preparation method comprising culturing the transformed cells or recombinant viruses as described in the aforementioned embodiments, and inducing expression to obtain the mutant respiratory syncytial virus pre-fusion F protein.
- the present disclosure provides the use of the mutant respiratory syncytial virus pre-fusion F protein or biomaterial described in any one of the aforementioned embodiments in any one of the following (a) to (c):
- the medicament comprises a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine;
- the present disclosure provides a drug for preventing and/or treating respiratory syncytial virus infection, comprising the mutant respiratory syncytial virus pre-fusion F protein described in any one of the aforementioned embodiments, the aforementioned biological material, or the respiratory syncytial virus-specific antibody described in the aforementioned embodiments.
- the present disclosure provides a pharmaceutical composition, which comprises the mutant respiratory syncytial virus pre-fusion F protein, the biological material or the respiratory syncytial virus-specific antibody described in (a); and a pharmaceutically acceptable carrier.
- the present disclosure provides a respiratory syncytial virus diagnostic reagent, comprising the mutant respiratory syncytial virus pre-fusion F protein described in any one of the aforementioned embodiments, or the respiratory syncytial virus-specific antibody described in the aforementioned embodiments.
- the present disclosure provides a respiratory syncytial virus diagnostic reagent, comprising the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
- the present disclosure provides a method for preventing and/or treating respiratory syncytial virus infection, the method comprising administering a therapeutically effective amount of the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody to a patient in need thereof;
- the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- the present disclosure provides a method for diagnosing respiratory syncytial virus infection, comprising the step of using the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
- the present disclosure provides the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody for use in preventing and/or treating respiratory syncytial virus infection;
- the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- the present disclosure provides the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody, for use in diagnosing respiratory syncytial virus infection.
- the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations S55C and T189C and a mutant in which amino acid residues at positions 104 to 137 are replaced with GSGSGGSGSGRS, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
- the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations P101C and V152C, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
- the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations P101C and V152C and a mutant in which amino acid residues at positions 104 to 137 are replaced with GSGSGGSGSGRS, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
- the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes mutants of cysteine substitution mutations S55C, T189C, P101C and V152C, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
- the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations S55C, T189C, P101C and V152C, and a mutant in which the amino acid residues at positions 104 to 137 are replaced with GSGSGGSGSGRS, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
- the position of the mutated amino acid residue in the present disclosure is shown in the amino acid sequence SEQ ID No. 01 of the wild-type respiratory syncytial virus prefusion F protein, which has three natural substitutions of P102A, I379V and M447V compared with the amino acid sequence of GenBank accession number: P03420.
- the amino acid sequence of other wild-type respiratory syncytial virus prefusion F protein can also be used as a template, including but not limited to directly using the amino acid sequence of GenBank accession number: P03420, or containing 1 or 2 natural substitutions on the basis of P03420.
- wild type refers to a gene or gene product that is separated from a naturally occurring source.
- a wild-type gene is the most commonly observed gene in a population and is therefore arbitrarily designed to be the "normal” or "wild-type” form of a gene.
- modified refers to a gene or gene product that shows sequence modification (e.g., substitution, truncation or insertion), post-translational modification and/or functional properties (e.g., altered properties) compared to a wild-type gene or gene product. Note that naturally occurring mutants can be isolated; these mutants are identified by the fact that they have altered properties compared to a wild-type gene or gene product.
- methionine (M) can be replaced by arginine (R) by replacing the codon (ATG) for methionine at the relevant position in a polynucleotide encoding a mutant monomer.
- Methods for introducing or replacing non-naturally occurring amino acids are also well known in the art.
- the various monoclonal antibodies described in the present disclosure are all obtained through genetic engineering technology, and high-purity antibodies are obtained after recombinant expression based on known antibody sequences and affinity chromatography for use as detection antibodies.
- D25 the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.02 and SEQ ID No.03, respectively, and specifically recognize the pre-fusion conformation epitope ⁇
- AM14 the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.04 and SEQ ID No.05, respectively, and specifically recognize the pre-fusion trimer conformation, and bind to epitopes IV and V across monomers
- MPE8 the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.06 and SEQ ID No.07, respectively, and recognize epitopes II-V, and partially bind across monomers
- 101F the amino acid sequences of the light chain and The amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.08 and SEQ ID No.09, respectively, recognizing epitope IV
- Palivizumab the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.
- a mutant respiratory syncytial virus prefusion F protein described in the present disclosure can be obtained by recombinant expression using genetic engineering technology, such as Chinese hamster ovary cells (CHO), tumor cell lines, BHK cells, HEK293 cell lines and other mammalian cells or bacteria, yeast, fungi, insect cells, etc., or transgenic animals, or transgenic plants.
- the mutant protein described in the present disclosure is delivered to the target host cell in the form of a viral vector, such as adenovirus (human and chimpanzee), adeno-associated virus, vaccinia virus, herpes virus, retroviral vector, etc.
- the mutant protein described in the present disclosure is delivered to the target host cell in the form of a naked or encapsulated nucleic acid vector, such as using linear RNA, circular RNA, dsDNA, cDNA, etc.
- the mutant protein is obtained in a commonly used or known form in this professional field.
- a mutant respiratory syncytial virus pre-fusion F protein mutant form described in the present disclosure can also add other mutations on the basis of the mutant form described in the present disclosure to stabilize or improve the pre-fusion conformational activity or expression level, such as adding proline point mutations to obtain rigid fixation of the secondary/tertiary structure, adding amino acid point mutations with side chain groups to obtain cavity filling effects, adding hydrophobic amino acid point mutations to obtain hydrophobic effects, adding charged amino acid point mutations to obtain electrostatic strengthening or weakening effects, adding intermolecular disulfide bonds to obtain covalent connections between monomeric F protein molecules, adding heterologous tags to the C-terminus of the F protein to improve the stability and expression level of the F protein trimer, adding flexible amino acid chains at both ends of the F protein to form a Loop tandem structure, adding an amino acid chain with an ⁇ -helical structure to the C-terminus of the F protein to improve the stability of the F protein trimer, adding an amino acid chain with a structural change function, etc., or mutation methods or means
- the mutant respiratory syncytial virus pre-fusion F protein described in the present disclosure has excellent neutralizing antibody binding activity and thermal stability compared with similar products, and is suitable for development as one of the components of the respiratory syncytial virus vaccine.
- Example 1 Disulfide bond mutation design and activity screening of conformationally stable respiratory syncytial virus prefusion F protein
- amino acid mutations that can stabilize its pre-fusion conformation were designed according to the principles of structural biology. Using the amino acid sequence of the pre-fusion F protein of wild-type respiratory syncytial virus SEQ ID No.01 or the amino acid sequence of the F protein of other wild-type virus strains as a template, intramolecular disulfide bond mutations were added to enhance the structural stability between the pre-fusion F1 subunit and the F2 subunit or within the F1 to prevent the conformational transition of the HRA and HRB regions of the heptapeptide repeat region, while maintaining or enhancing the binding activity of important sites such as the ⁇ epitope, thereby improving the pre-fusion F protein-specific immunogenicity of the mutant antigen.
- the transmembrane region 514 to 574aa at the C-terminus of the F protein was replaced with "SAIGGYIPEAPRDGQAYVRKDGEWVLLSTFL (SEQ ID No.47)" during plasmid construction.
- This fragment is a soluble T4Fibritin trimerization domain to maintain the trimer structure of the F protein.
- the disulfide bond mutations designed according to the above objectives are shown in Table 1, and the detailed sequences are shown in SEQ ID No.16 to No.29.
- mutant antigen nucleotide sequence described in Table 1 was inserted into the pEE 12.4 expression vector (see Figure 1 for the plasmid map, and the nucleotide sequence is shown in SEQ ID No. 30) and then the whole plasmid was synthesized.
- the mutant plasmid was transfected into HEK 293T cells cultured in six-well plates using TransIT-X2 TM Dynamic Delivery System (Mirus, MIR6003) or Lipofectamine TM 3000 (Invitrogen, L3000001) transfection kit.
- the supernatant culture fluid was collected for Western Blot protein immunoblotting to confirm the expression of the target protein, the primary antibody Motavizumab, the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody (BioLegend, 410603).
- the mutant plasmids confirmed to be expressed normally were transiently transferred to 200 mL of ExpiCHO-S TM (Gibco, A29127) suspension cell culture medium using the ExpiCHO TM expression system kit (Gibco, A29133) or other methods, and the supernatant culture medium was collected by centrifugation after continuous culture for 2 to 3 days.
- the target protein was purified by ion exchange chromatography and/or ceramic hydroxyapatite chromatography and/or gel molecular sieve chromatography, and the expression of each mutant plasmid was finally detected and counted.
- the results are shown in Table 2, and DS-Cav1 (SEQ ID No. 31), SC-TM (SEQ ID No. 32) and pXCS852 (SEQ ID No. 33) were used as positive controls. Among them, YD03, YD06, YD07, YD12, YD13, YD16, and YD22 mutant antigens were expressed normally.
- DS-Cav1 is the first pre-fusion conformation F protein developed by the team of the National Institute of Allergy and Infectious Diseases (NIAID) of the United States.
- the intramolecular disulfide bond is obtained by S155C and S290C point mutations in the F1 fragment, and S190F and V207L point mutations are added to enhance the binding activity of the key neutralizing epitope (DOI: 10.1126/science.1243283).
- pXCS852 is a mutant "pXCS852" mentioned in the embodiment of Pfizer's public patent (CN201680075615.8).
- S55C and L188C intramolecular disulfide bonds, as well as T54H and D486S point mutations are added to enhance the stability and epitope activity of the pre-fusion conformation.
- the purified mutant antigens were further subjected to epitope activity detection, and six monoclonal antibodies D25, AM14, MPE8, Palivizumab, Motavizumab and Nirsevimab (the light chain and heavy chain sequences are described in any one of SEQ ID No. 02-05, respectively, as described above) were used as primary antibodies to detect the binding of each mutant antigen.
- the operation method is simply described as follows: the purified mutant antigens were diluted to 1.1 ⁇ g/well or 3.3 ⁇ g/well, 3-fold gradient dilution to 7 concentration points, and the antigens were coated in a 96-well plate using a coating buffer.
- YD12 and YD22 have strong binding to D25, YD16 has binding to D25, YD03, YD06, YD07 and YD13 have weak binding to D25; YD12 and YD22 have strong binding to AM14, and the other antigens have weak binding; YD12 and YD22 have strong binding to MPE8, YD03 and YD16 have binding to MPE8, YD06, YD07 and YD13 have weak binding to MPE8; YD12 has strong binding to Palivizu Mab binding was the strongest, YD07 had the weakest binding to Palivizumab, and the rest of the antigens were bound; each antigen was bound to Motavizumab; YD12 and YD22 had strong binding to Nirsevimab, YD16 had binding to Nirsevimab, and YD03, YD06, YD07 and YD13 had weak binding to Ni
- Nirsevimab and D25 belong to the same ⁇ epitope, the binding trends were consistent.
- the ELISA results showed that YD12 and YD22 had better binding activity with each monoclonal antibody, among which AM14 had significantly better binding activity than DS-Cav1 and SC-TM in the positive control group, showing excellent quaternary structure stability.
- DS-Cav1, SC-TM and pXCS852 were used as positive controls. It can be seen that YD03, YD12 and YD22 have very good binding ability with the seven monoclonal antibodies, reflecting that the mutated disulfide bond can stabilize the pre-fusion F protein conformation and maintain the original epitope activity. In addition, compared with DS-Cav1 and SC-TM, the epitope activities of pXCS852 were relatively weak, and its binding activity with D25 and AM14 was weaker than that with YD12 and YD22.
- Example 2 Design of connecting peptides and activity screening of respiratory syncytial virus prefusion F protein
- the natural wild-type F protein first forms the F0 precursor protein and then releases a polypeptide pep27 composed of 27 amino acids after being cleaved by furin, forming F1 and F2 fragments connected by two pairs of disulfide bonds.
- the three F0 monomers are self-assembled after enzyme cleavage to form a pre-fusion trimer conformation in a metastable state. This process is orderly and complex. Factors such as cell metabolic state and F0 precursor protein expression will directly affect the final pre-fusion F protein trimer yield and conformation.
- the present disclosure replaces pep27 with a shorter connecting peptide and knocks out the two enzyme cleavage sites FCS1 and FCS2 at the same time, thereby increasing the F0 precursor expression and the yield of the pre-fusion F trimer. More importantly, the replacement of the connecting peptide can lock the connection between the FP fusion region at the N-terminus of the F1 fragment and the F2 fragment, thereby achieving the purpose of further stabilizing the pre-fusion conformation. At the same time, the selection of the connecting peptide sequence will affect the charge and hydrophobicity near the region, thereby affecting the epitope activity of the pre-fusion F protein.
- the present invention uses bioinformatics analysis and protein structure prediction methods to design three replacement connecting peptides, which are named GS12, GRS12 and Q4, respectively.
- the specific sequences are shown in Table 4. All mutated connecting peptides were modified using the amino acid sequence SEQ ID No.01 of the wild-type respiratory syncytial virus prefusion F protein as a template, and then inserted into the plasmid pEE12.4 (SEQ ID No.30) for full plasmid synthesis.
- transmembrane region 514 to 574aa at the C-terminus of F protein was replaced with "SAIGGYIPEAPRDGQAYVRKDGEWVLLSTFL" during plasmid construction.
- This fragment is a soluble T4Fibritin trimerization domain to maintain the trimer structure of F protein.
- the “SC-TM” structure acquired a prefusion conformation with higher neutralizing activity by means of three point mutations (N67I, S215P, E487Q) and replacement of the pep27 region with a linker peptide (Janssen Pharmaceuticals, DOI: 10.1038/ncomms9143).
- the synthesized plasmid was transiently transferred into 200 mL of ExpiCHO-S TM suspension cell culture medium using the ExpiCHO TM expression system kit or other methods. After continuous culture for 2 to 3 days, the supernatant culture medium was collected by centrifugation. The purified antigen was diluted to a specific protein concentration, and the antigen was coated in a 96-well plate using a coating buffer. After 2 hours, a blocking solution was added overnight. The primary antibody and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation. TMB color was developed, and the absorption at 450 nm was detected by an enzyme reader. After data processing, it was shown in Figure 3.
- SC-TM was used as a positive control. From the results, it can be observed that among the three different replacement linker peptides, the GRS12 linker peptide mutant antigen has better binding activity with five different monoclonal antibodies (D25, AM14, MPE8, 101F and Motavizumab) compared with GS12 and Q4. At the same time, there was no significant difference in the expression level between the GRS12 mutant antigen and SC-TM. This shows that the GRS12 linker peptide has the potential to increase expression and maintain the pre-fusion conformation.
- monoclonal antibodies D25, AM14, MPE8, 101F and Motavizumab
- Example 3 Dual-factor mutation design and activity screening of conformationally stable respiratory syncytial virus prefusion F protein
- the present disclosure combines the preferred results obtained by two different strategies for screening, i.e., dual-factor mutation screening.
- the present disclosure aims to obtain a mutant antigen with a pre-fusion conformation, high expression ability, high epitope binding activity and stability, thereby developing a recombinant protein with the ability to prevent or treat RSV infection.
- the intramolecular disulfide bond mutations selected S55C-T189C (YD03), P101C-V152C (YD12) and two pairs of disulfide bonds mutated simultaneously (YD22), and the GRS12 connecting peptide mutation was added to the above three disulfide bond mutations to form YD03-1 (SEQ ID No. 42), YD12-1 (SEQ ID No. 43) and YD22-1 (SEQ ID No. 44).
- the synthesized plasmid was transiently transferred to 200mL volume of ExpiCHO-S TM suspension cell culture medium using ExpiCHO TM expression system kit or other methods, and the supernatant culture medium was collected by centrifugation after continuous culture for 2-3 days.
- the purified antigen protein was subjected to reducing SDS-PAGE electrophoresis (SurePAGE TM , Genscript) to detect the molecular weight and purity of the antigen monomer, Western Blot protein immunoblotting to detect the antigen (primary antibody: Motavizumab, secondary antibody: Direct-Blot TM HRP anti-human IgG1 Fc Antibody), ECL chemiluminescence ultrasensitive color development (Biyuntian, P0018AM), and DS-Cav1 and SC-TM were used as positive controls, and the results are shown in Figure 4.
- SDS-PAGE TM SDS-PAGE electrophoresis
- YD12-1, YD12-2 and YD12-3 were 18.06 times, 14.28 times and 17.04 times higher than that of DS-Cav1, respectively, and the expression of YD12-1, YD12-2 and YD12-3 was 2.49 times, 1.97 times and 2.35 times higher than that of SC-TM, respectively, with significant high expression characteristics.
- the purity and molecular weight of the purified antigens were detected by size exclusion chromatography.
- the detection equipment was an Agilent 1260 high performance liquid chromatograph, the chromatographic column used was Agilent Advance Bio SEC 300A (7.8 ⁇ 300mm), the mobile phase selected was an ammonium formate buffer system, the flow rate was controlled at 0.5-1.0 mL/min, and the DAD detector monitored the OD280 signal. The results are shown in Figure 5.
- the molecular sizes of the mutant antigens can be analyzed from large to small, in the order of YD03-1, YD03, YD12-2, YD12-3, YD22, YD12, DS-Cav1, YD12-1, YD22-1, and SC-TM.
- the chromatographic detection of each purified antigen was a single protein peak, which met the purity requirements.
- DS-Cav1 and SC-TM are used as positive controls.
- YD03 and YD03-1, YD12 and YD12-1, YD22 and YD22-1 it can be observed that the addition of the GRS12 connecting peptide mutation enhances the affinity of the above antigens with D25, AM14 and MPE8.
- affinity of YD12-1, YD12-2 and YD12-3 with D25, AM14 and MPE8 it can be observed that the length of the connecting peptide affects the affinity.
- the purified antigen was diluted to a specific protein concentration, and the antigen was coated in a 96-well plate using a coating buffer. After 2 hours, the blocking solution was added overnight, and the primary antibody AM14 and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation. TMB color was developed, and the absorption at 450nm was detected by an enzyme reader. After data processing, it is shown in Figure 6, and DS-Cav1 and SC-TM were used as positive controls.
- YD22-1 showed excellent binding ability to the pre-fusion trimer conformation, which was significantly better than SC-TM and other antigens, and at the same time, it was significantly improved compared to YD22, proving that the GRS12 linker peptide has the effect of enhancing the pre-fusion conformation.
- Example 4 Evaluation of thermal stability of conformationally stabilized respiratory syncytial virus prefusion F protein
- DFS Differential scanning fluorescence
- the turbidity points of the mutant antigen YD22-1 and the control antigen SC-TM were determined by gradually increasing the temperature of the protein sample while monitoring the light scattering signal (the turbidity point refers to the temperature at which the sample begins to become turbid under heating conditions).
- the concentration of the sample to be tested was adjusted to 500 ⁇ g/mL, the sample volume was 500 ⁇ L, and the sample was measured every time the temperature was increased by 5°C.
- the signal at OD350nm was detected using a SpectraMax M3 multi-function microplate reader (Molecular Devices). The results are shown in Figure 7.
- the measured turbidity point of YD22-1 was around 85.0°C, while the turbidity point of SC-TM was around 75.0°C.
- the turbidity point of YD22-1 was nearly 10.0°C higher than that of SC-TM, and YD22-1 showed excellent thermal stability.
- the protein concentration of YD22-1 and control antigen SC-TM was adjusted to 500 ⁇ g/mL, the sample volume was 100 ⁇ L, 50 ⁇ L was placed in a ProFlex TM PCR instrument (Applied Biosystems) for heat treatment at 60°C for 1 hour (after heat treatment), and the remaining 50 ⁇ L sample was temporarily stored at 2-8°C (before heat treatment). After the samples before and after heat treatment were diluted to a specific protein concentration, the antigen was coated in a 96-well plate using a coating buffer, and a blocking solution was added overnight after 2 hours.
- the primary antibody (AM14 or D25) and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation and TMB color development was performed. The absorption at OD450nm was detected by a microplate reader. The ratio of the values before and after heat treatment was the relative binding activity change between the antigen and the monoclonal antibody. The results are shown in Table 9. It can be seen that YD22-1 can still maintain most of the specific trimeric antibody binding activity (AM14 relative activity 0.83) after heat treatment at 60°C for 1 hour, which is significantly better than the positive control SC-TM (AM14 relative activity 0.65), indicating that the pre-fusion trimeric conformation of YD22-1 is more stable. At the same time, the pre-fusion conformation epitope ⁇ binding activity (D25) of YD22-1 and SC-TM remains unchanged before and after heat treatment.
- the mutant respiratory syncytial virus prefusion F protein provided in the present disclosure has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein: (a) at least one amino acid residue in the F1 subunit and/or the F2 subunit is replaced by cysteine, (b) the amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, and the amino acid residue length of the connecting peptide is at least 2.
- a mutant respiratory syncytial virus prefusion F protein described in the present disclosure has excellent neutralizing antibody binding activity and thermal stability compared to similar products, is suitable for development as one of the components of a respiratory syncytial virus vaccine, and has excellent industrial applicability.
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Abstract
Provided is a mutant respiratory syncytial virus pre-fusion F protein, having the following mutations compared with a wild-type respiratory syncytial virus pre-fusion F protein: (a) at least one amino acid residue in an F1 subunit and/or an F2 subunit is substituted by cysteine, and (b) amino acid residues at positions 104-144 of the wild-type respiratory syncytial virus pre-fusion F protein are partially or completely substituted by a linker peptide, at least two lengths of the amino acid residues of the linker peptide being comprised. Compared with similar products, the mutant respiratory syncytial virus pre-fusion F protein has excellent neutralizing antibody binding activity and thermal stability, and is suitable for being developed into one of components of respiratory syncytial virus vaccines.
Description
相关申请的交叉引用CROSS-REFERENCE TO RELATED APPLICATIONS
本申请要求于2022年11月21日提交中国国家知识产权局的申请号为202211472876.7、名称为“突变型呼吸道合胞病毒融合前F蛋白及其应用”的中国专利申请的优先权,其全部内容通过引用结合在本申请中。This application claims priority to the Chinese patent application with application number 202211472876.7 filed with the State Intellectual Property Office of China on November 21, 2022, and entitled “Mutated respiratory syncytial virus prefusion F protein and its application”, the entire contents of which are incorporated by reference into this application.
本公开涉及生物工程技术领域,尤其是涉及突变型呼吸道合胞病毒融合前F蛋白及其应用。The present disclosure relates to the field of bioengineering technology, and in particular to a mutant respiratory syncytial virus pre-fusion F protein and an application thereof.
呼吸道合胞病毒(Respiratory Syncytial Virus,RSV)是引起婴幼儿、老年人及免疫功能缺陷患者下呼吸道感染的重要病原体。2020年,全球5岁以下儿童中呼吸道合胞病毒严重感染人数高达3460万人,其中仅中国的感染人数就达到300万人。每年大约3%~7%的60岁以上老年人会受到RSV感染。老年人因为免疫力下降和基础疾病,出现严重疾病的风险更高。WHO估计每年全球有6400万儿童感染呼吸道合胞病毒,其中15万儿童死于呼吸道合胞病毒感染,且99%的死亡病例发生在中低收入国家,同时引起非常严重的全球医疗负担,据估计2017年全球与RSV相关的直接医疗费用为48.2亿欧元。呼吸道合胞病毒感染可导致严重并发症,包括毛细支气管炎或肺炎,通常伴有急性呼吸窘迫,需要住院治疗。天然的RSV感染不会引起长期的免疫保护,且会反复感染。目前只有一种已获许可的单克隆抗体产品(Palivizumab)用于降低高危新生儿严重疾病的发生率。近30多年来尚无有效的RSV疫苗上市,安全有效的RSV疫苗开发一直被视为非常具有挑战性。因此,呼吸道合胞病毒疫苗已被WHO列为全球最优先发展的疫苗之一。Respiratory syncytial virus (RSV) is an important pathogen that causes lower respiratory tract infections in infants, the elderly, and immunocompromised patients. In 2020, the number of children under 5 years old with severe RSV infection worldwide reached 34.6 million, of which 3 million were infected in China alone. Every year, approximately 3% to 7% of people over 60 years old are infected with RSV. The elderly are at higher risk of developing serious diseases due to decreased immunity and underlying diseases. The WHO estimates that 64 million children are infected with RSV worldwide each year, of which 150,000 children die from RSV infection, and 99% of deaths occur in low- and middle-income countries, causing a very serious global medical burden. It is estimated that the global direct medical costs related to RSV were 4.82 billion euros in 2017. RSV infection can lead to serious complications, including bronchiolitis or pneumonia, often accompanied by acute respiratory distress, requiring hospitalization. Natural RSV infection does not induce long-term immune protection and can be recurrent. Currently, there is only one licensed monoclonal antibody product (Palivizumab) used to reduce the incidence of severe diseases in high-risk newborns. There has been no effective RSV vaccine on the market for more than 30 years, and the development of a safe and effective RSV vaccine has been considered very challenging. Therefore, the respiratory syncytial virus vaccine has been listed by the WHO as one of the top priority vaccines for development worldwide.
发明内容Summary of the invention
本公开提供了一种突变型呼吸道合胞病毒融合前F蛋白,所述突变型呼吸道合胞病毒融合前F蛋白相较于野生型呼吸道合胞病毒融合前F蛋白存在以下突变:The present disclosure provides a mutant respiratory syncytial virus prefusion F protein, wherein the mutant respiratory syncytial virus prefusion F protein has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein:
(a)F1亚基和/或F2亚基中至少一个氨基酸残基被半胱氨酸取代,并且该取代使得呼吸道合胞病毒融合前F蛋白F1亚基与F2亚基间存在非天然二硫键连接,所述非天然二硫键包括F1亚基与F2亚基之间形成的除Cys69-Cys212和Cys37-Cys439之外的二硫键;(a) at least one amino acid residue in the F1 subunit and/or the F2 subunit is substituted by cysteine, and the substitution results in a non-native disulfide bond between the F1 subunit and the F2 subunit of the respiratory syncytial virus prefusion F protein, wherein the non-native disulfide bond includes a disulfide bond other than Cys69-Cys212 and Cys37-Cys439 formed between the F1 subunit and the F2 subunit;
(b)野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽部分或全部取代,所述连接肽的氨基酸残基长度至少2个;(b) amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, wherein the amino acid residue length of the connecting peptide is at least 2;
所述野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列如SEQ ID No.01所示。The amino acid sequence of the wild-type respiratory syncytial virus pre-fusion F protein is shown in SEQ ID No.01.
可选地,所述半胱氨酸取代包括S55C、T189C、P101C或V152C中至少一种。Optionally, the cysteine substitution comprises at least one of S55C, T189C, P101C or V152C.
可选地,所述半胱氨酸取代包括S55C和T189C,和/或,P101C和V152C。Optionally, the cysteine substitutions include S55C and T189C, and/or, P101C and V152C.
可选地,所述野生型呼吸道合胞病毒融合前F蛋白第104~137位氨基酸残基被连接肽全部取代。Optionally, amino acid residues 104 to 137 of the wild-type respiratory syncytial virus pre-fusion F protein are completely replaced by a connecting peptide.
可选地,所述连接肽的氨基酸序列为GSGSGGSGSGRS。Optionally, the amino acid sequence of the connecting peptide is GSGSGGSGSGRS.
可选地,所述野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽全部取代,所述连接肽的氨基酸序列为GSGSGRS或GS。Optionally, amino acid residues 104 to 144 of the wild-type respiratory syncytial virus pre-fusion F protein are all replaced by a connecting peptide, and the amino acid sequence of the connecting peptide is GSGSGRS or GS.
本公开提供了一种生物材料,所述生物材料包括以下(a)~(d)中任一项:The present disclosure provides a biomaterial, the biomaterial comprising any one of the following (a) to (d):
(a)编码权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白的核酸分子;(a) a nucleic acid molecule encoding the mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6;
(b)含有(a)所述核酸分子的重组载体,优选地,所述重组载体的原始质粒为pEE12.4;(b) a recombinant vector containing the nucleic acid molecule described in (a), preferably, the original plasmid of the recombinant vector is pEE12.4;
(c)含有(a)所述核酸分子或(b)所述重组载体的转化细胞;优选地,所述转化细胞的宿主细胞选自哺乳动物细胞、细菌、酵母、真菌或昆虫细胞;(c) a transformed cell containing the nucleic acid molecule (a) or the recombinant vector (b); preferably, the host cell of the transformed cell is selected from mammalian cells, bacteria, yeast, fungi or insect cells;
进一步优选地,所述哺乳动物细胞选自中国仓鼠卵巢细胞、肿瘤细胞、BHK细胞或HEK293细胞;Further preferably, the mammalian cell is selected from Chinese hamster ovary cells, tumor cells, BHK cells or HEK293 cells;
(d)含有(a)所述核酸分子或(b)所述重组载体的重组病毒,优选地,所述重组病毒包括腺病毒、腺相关病毒、牛痘病毒、疱疹病毒或逆转录病毒载体。(d) a recombinant virus containing the nucleic acid molecule described in (a) or the recombinant vector described in (b), preferably, the recombinant virus comprises an adenovirus, an adeno-associated virus, a vaccinia virus, a herpes virus or a retroviral vector.
本公开提供了所述突变型呼吸道合胞病毒融合前F蛋白的制备方法,培养前述的转化细胞或重组病毒,并诱导表达获得突变型呼吸道合胞病毒融合前F蛋白。The present disclosure provides a method for preparing the mutant respiratory syncytial virus pre-fusion F protein, which comprises culturing the aforementioned transformed cells or recombinant viruses, and inducing expression to obtain the mutant respiratory syncytial virus pre-fusion F protein.
前述突变型呼吸道合胞病毒融合前F蛋白或前述生物材料在以下(a)~(c)中任一项的应用:
Use of the aforementioned mutant respiratory syncytial virus prefusion F protein or the aforementioned biological material in any one of the following (a) to (c):
(a)制备呼吸道合胞病毒特异性抗体中的应用;(a) Application in the preparation of respiratory syncytial virus-specific antibodies;
(b)制备用于预防和/或治疗呼吸道合胞病毒感染的药物,优选地,所述药物包括重组蛋白疫苗、载体类疫苗或核酸疫苗;(b) preparing a medicament for preventing and/or treating respiratory syncytial virus infection, preferably, the medicament comprises a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine;
(c)制备呼吸道合胞病毒诊断试剂,可选地,所述诊断试剂用于诊断呼吸道合胞病毒感染。(c) preparing a diagnostic reagent for respiratory syncytial virus, optionally, the diagnostic reagent is used for diagnosing respiratory syncytial virus infection.
本公开提供了一种预防和/或治疗呼吸道合胞病毒感染的药物,包含前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料或前述(a)所述的呼吸道合胞病毒特异性抗体;The present disclosure provides a drug for preventing and/or treating respiratory syncytial virus infection, comprising the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material or the respiratory syncytial virus-specific antibody described in (a);
可选地,所述药物包括重组蛋白疫苗、载体类疫苗或核酸疫苗。Optionally, the drug includes a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
本公开提供一种药物组合物,所述药物组合物包含前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料或前述(a)所述的呼吸道合胞病毒特异性抗体;和药学上可接受的载体。The present disclosure provides a pharmaceutical composition, which comprises the mutant respiratory syncytial virus pre-fusion F protein, the biological material or the respiratory syncytial virus-specific antibody described in (a); and a pharmaceutically acceptable carrier.
本公开提供了一种呼吸道合胞病毒诊断试剂,包含前述突变型呼吸道合胞病毒融合前F蛋白,或前述的呼吸道合胞病毒特异性抗体。The present disclosure provides a respiratory syncytial virus diagnostic reagent, comprising the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
本公开提供了用于预防和/或治疗呼吸道合胞病毒感染的方法,所述方法包括给予有需要的患者治疗有效量的前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料,或前述的呼吸道合胞病毒特异性抗体;The present disclosure provides a method for preventing and/or treating respiratory syncytial virus infection, the method comprising administering a therapeutically effective amount of the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody to a patient in need thereof;
可选地,所述突变型呼吸道合胞病毒融合前F蛋白、生物材料或呼吸道合胞病毒特异性抗体以重组蛋白疫苗、载体类疫苗或核酸疫苗的形式给予。Optionally, the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
本公开提供了用于诊断呼吸道合胞病毒感染的方法,所述方法包括使用前述突变型呼吸道合胞病毒融合前F蛋白,或前述的呼吸道合胞病毒特异性抗体的步骤。The present disclosure provides a method for diagnosing respiratory syncytial virus infection, comprising the step of using the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
本公开提供了前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料,或前述的呼吸道合胞病毒特异性抗体,用于预防和/或治疗呼吸道合胞病毒感染;The present disclosure provides the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody for use in preventing and/or treating respiratory syncytial virus infection;
可选地,所述突变型呼吸道合胞病毒融合前F蛋白、生物材料或呼吸道合胞病毒特异性抗体以重组蛋白疫苗、载体类疫苗或核酸疫苗的形式给予。Optionally, the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
本公开提供了前述突变型呼吸道合胞病毒融合前F蛋白,或前述的呼吸道合胞病毒特异性抗体,用于诊断呼吸道合胞病毒感染。The present disclosure provides the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody, for use in diagnosing respiratory syncytial virus infection.
为了更清楚地说明本公开具体实施方式或现有技术中的技术方案,下面将对具体实施方式或现有技术描述中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图是本公开的一些实施方式,对于本领域普通技术人员来讲,在不付出创造性劳动的前提下,还可以根据这些附图获得其他的附图。In order to more clearly illustrate the specific embodiments of the present disclosure or the technical solutions in the prior art, the drawings required for use in the specific embodiments or the description of the prior art will be briefly introduced below. Obviously, the drawings described below are some embodiments of the present disclosure. For ordinary technicians in this field, other drawings can be obtained based on these drawings without paying any creative work.
图1为本公开实施例中使用的pEE12.4表达载体质粒图谱;FIG1 is a plasmid map of the pEE12.4 expression vector used in the embodiments of the present disclosure;
图2为各突变抗原与六种不同单克隆抗体的结合情况(间接法ELISA);FIG2 shows the binding of each mutant antigen to six different monoclonal antibodies (indirect ELISA);
图3为三种连接肽与五种单克隆抗体的结合情况(间接法ELISA);FIG3 shows the binding of three connecting peptides to five monoclonal antibodies (indirect ELISA);
图4为纯化后抗原的还原性SDS-PAGE(左图)和Western Blot(右图);Figure 4 shows the reducing SDS-PAGE (left) and Western Blot (right) of the purified antigen;
图5为纯化后抗原HPLC检测图谱;Fig. 5 is a graph showing HPLC detection of the purified antigen;
图6为双因素突变抗原与AM14单抗的结合情况(间接法ELISA);FIG6 shows the binding of the dual-factor mutant antigen to the AM14 monoclonal antibody (indirect ELISA);
图7为YD22-1和SC-TM的浊点分析图谱。FIG. 7 is a turbidity point analysis graph of YD22-1 and SC-TM.
为使本公开实施例的目的、技术方案和优点更加清楚,下面将结合本公开实施例中的附图,对本公开实施例中的技术方案进行清楚、完整地描述,显然,所描述的实施例是本公开一部分实施例,而不是全部的实施例。In order to make the purpose, technical solutions and advantages of the embodiments of the present disclosure clearer, the technical solutions in the embodiments of the present disclosure will be clearly and completely described below in conjunction with the drawings in the embodiments of the present disclosure. Obviously, the described embodiments are only part of the embodiments of the present disclosure, not all of the embodiments.
因此,以下对在附图中提供的本公开的实施例的详细描述并非旨在限制要求保护的本公开的范围,而是仅仅表示本公开的选定实施例。基于本公开中的实施例,本领域普通技术人员在没有作出创造性劳动前提下所获得的所有其他实施例,都属于本公开保护的范围。Therefore, the following detailed description of the embodiments of the present disclosure provided in the accompanying drawings is not intended to limit the scope of the present disclosure claimed for protection, but merely represents selected embodiments of the present disclosure. Based on the embodiments in the present disclosure, all other embodiments obtained by ordinary technicians in the field without creative work are within the scope of protection of the present disclosure.
呼吸道合胞病毒(Respiratory Syncytial Virus,RSV)感染主要由糖蛋白F和G介导,黏附蛋白(G)与宿主细胞膜黏附,促使病毒吸附于细胞表面,融合蛋白(F)介导病毒包膜与宿主细胞膜融合,使病毒进入细胞,在病毒融合和进入期间,F蛋白从亚稳定的融合前构象(pre-F)转变为稳定的融合后构象(post-F)。F蛋白序列在不同亚型间较为保守,是RSV疫苗开发的重要抗原靶点。RSV F蛋白属于Ⅰ型融合蛋白,主要包括以下几个功能区:信号肽(1~26aa)位于F蛋白N端,负责将F蛋白引导至细胞膜表面;两个弗林蛋白酶切位点,主要由碱性氨基酸组成的蛋白酶识别位点分别为酶切位点1(KKRKRR,FCS1)和酶切位点2(RARR,FCS2);融合肽FP(137~146aa)由19个氨基酸组成,F蛋白的三聚体激活时,融合肽负责插入到相邻的细胞的细胞膜;七肽重复区HRA(146~216aa)和HRB(460~514aa),
在膜融合过程中,HRA和HRB形成稳定的6HB结构;跨膜区(514~574aa),F蛋白嵌入膜内的区域;CT区,F蛋白位于细胞质内的区域,其可与病毒的M蛋白相互作用,与病毒的包装和出芽有关。Respiratory Syncytial Virus (RSV) infection is mainly mediated by glycoproteins F and G. Adhesion protein (G) adheres to the host cell membrane, promoting the adsorption of the virus on the cell surface. Fusion protein (F) mediates the fusion of the viral envelope and the host cell membrane, allowing the virus to enter the cell. During viral fusion and entry, the F protein changes from a metastable pre-fusion conformation (pre-F) to a stable post-fusion conformation (post-F). The F protein sequence is relatively conserved among different subtypes and is an important antigenic target for RSV vaccine development. RSV F protein belongs to type I fusion protein, which mainly includes the following functional regions: signal peptide (1-26aa) located at the N-terminus of F protein, responsible for guiding F protein to the cell membrane surface; two furin cleavage sites, protease recognition sites mainly composed of basic amino acids, namely cleavage site 1 (KKRKRR, FCS1) and cleavage site 2 (RARR, FCS2); fusion peptide FP (137-146aa) composed of 19 amino acids, when the trimer of F protein is activated, the fusion peptide is responsible for inserting into the cell membrane of adjacent cells; heptad repeat region HRA (146-216aa) and HRB (460-514aa), During membrane fusion, HRA and HRB form a stable 6HB structure; the transmembrane region (514-574aa), the region where the F protein is embedded in the membrane; the CT region, the region where the F protein is located in the cytoplasm, which can interact with the viral M protein and is related to the packaging and budding of the virus.
F蛋白首先合成蛋白前体F0,在细胞融合过程中,经弗林蛋白酶酶切后释放一个由27个氨基酸组成的多肽pep27(109~127aa),形成以二硫键相连接的F1片段和F2片段,从不稳定的融合前构象转变为稳定的融合后构象。比较融合前后RSV F蛋白结构表明,大多数二级和三级结构在融合前和融合后状态下都得到保留,相比之下,F1亚基N端和C端的区域显示出明显的构象变化。位于F1亚基N端的融合肽和五个二级结构元件(α2、α3、α4螺旋和β3、β4折叠)重新排列并与α5螺旋融合,形成一个长度>的单延伸融合后螺旋(α5post)。在F1亚基C末端,唯一的平行链(β22)散开,使融合前α10螺旋向α5post螺旋移动,以促进膜融合。The F protein is first synthesized as a protein precursor F0. During the cell fusion process, it is cleaved by furin to release a 27-amino acid polypeptide pep27 (109-127aa), forming F1 and F2 fragments connected by disulfide bonds, and transforming from an unstable pre-fusion conformation to a stable post-fusion conformation. Comparison of the RSV F protein structure before and after fusion showed that most of the secondary and tertiary structures were retained in the pre-fusion and post-fusion states. In contrast, the N-terminal and C-terminal regions of the F1 subunit showed obvious conformational changes. The fusion peptide and five secondary structural elements (α2, α3, α4 helices and β3, β4 folds) at the N-terminal end of the F1 subunit were rearranged and fused with the α5 helix to form a length > At the C-terminus of the F1 subunit, the only parallel strand (β22) spreads out, allowing the pre-fusion α10 helix to move toward the α5post helix to promote membrane fusion.
近年来,随着F蛋白的构象转变过程逐渐被揭示,融合前构象的F蛋白具有90%以上中和活性的Φ表位被发现,同时用于稳定preF结构的突变位点改造也得到证实,稳定的preF蛋白突变体作为疫苗抗原可以激活更高效的中和抗体。因此,开发稳定的融合前构象F蛋白抗原成为RSV疫苗研发的新目标。以结构生物学为基础开发的稳定融合前构象F蛋白疫苗也已进入临床阶段。In recent years, as the conformational transition process of the F protein has been gradually revealed, the Φ epitope with more than 90% neutralizing activity in the prefusion conformation of the F protein has been discovered, and the mutation site modification used to stabilize the preF structure has also been confirmed. Stable preF protein mutants can activate more efficient neutralizing antibodies as vaccine antigens. Therefore, the development of stable prefusion conformation F protein antigens has become a new goal for RSV vaccine research and development. The stable prefusion conformation F protein vaccine developed based on structural biology has also entered the clinical stage.
理想的融合前构象F蛋白突变体设计应具备以下几点特性:(1)维持融合前F蛋白三聚体的构象以获得正确的中和表位;(2)高表达量的三聚体蛋白以诱导产生足够的免疫反应并满足产业化制造需求,即F蛋白应具有高效的表达能力和自组装能力;(3)具有高稳定化的三聚体构象以持续保持融合前构象,保持原始或较高的免疫活性,满足生产制剂等需求。The ideal design of a pre-fusion conformation F protein mutant should have the following characteristics: (1) Maintaining the pre-fusion conformation of the F protein trimer to obtain the correct neutralizing epitope; (2) High expression levels of the trimer protein to induce sufficient immune response and meet the needs of industrial manufacturing, that is, the F protein should have efficient expression and self-assembly capabilities; (3) Having a highly stabilized trimer conformation to continuously maintain the pre-fusion conformation, maintain the original or higher immune activity, and meet the needs of production preparations.
本公开的提供一种突变型呼吸道合胞病毒融合前F蛋白,期望该突变蛋白能够具有稳定的融合前构象和高表达量,并可形成稳定的三聚体,从而可用于呼吸道合胞病毒感染的预防、诊断和治疗。The present disclosure provides a mutant respiratory syncytial virus prefusion F protein, and it is expected that the mutant protein can have a stable prefusion conformation and high expression level, and can form a stable trimer, so that it can be used for the prevention, diagnosis and treatment of respiratory syncytial virus infection.
本公开提供突变型呼吸道合胞病毒融合前F蛋白,所述突变型呼吸道合胞病毒融合前F蛋白相较于野生型呼吸道合胞病毒融合前F蛋白存在以下突变:The present disclosure provides a mutant respiratory syncytial virus prefusion F protein, wherein the mutant respiratory syncytial virus prefusion F protein has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein:
(a)F1亚基和/或F2亚基中至少一个氨基酸残基被半胱氨酸取代,并且该取代使得呼吸道合胞病毒融合前F蛋白F1亚基与F2亚基间存在非天然二硫键连接,所述非天然二硫键包括F1亚基与F2亚基之间形成的除Cys69-Cys212和Cys37-Cys439之外的二硫键;(a) at least one amino acid residue in the F1 subunit and/or the F2 subunit is substituted by cysteine, and the substitution results in a non-native disulfide bond between the F1 subunit and the F2 subunit of the respiratory syncytial virus prefusion F protein, wherein the non-native disulfide bond includes a disulfide bond other than Cys69-Cys212 and Cys37-Cys439 formed between the F1 subunit and the F2 subunit;
(b)野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽部分或全部取代,所述连接肽的氨基酸残基长度至少2个;(b) amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, wherein the amino acid residue length of the connecting peptide is at least 2;
所述野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列如SEQ ID No.01所示。The amino acid sequence of the wild-type respiratory syncytial virus pre-fusion F protein is shown in SEQ ID No.01.
需要说明的是,在本文所有讨论中,使用针对氨基酸的标准单字母或三字母代码,也使用标准的取代记法。可以理解的是,Cys69在本文中意指第69位的半胱氨酸。S55C在本文中意指第55位的丝氨酸被半胱氨酸取代。It should be noted that in all discussions herein, standard single-letter or three-letter codes for amino acids are used, and standard substitution notation is also used. It is understood that Cys69 herein means cysteine at position 69. S55C herein means that serine at position 55 is substituted with cysteine.
需要说明的是,所述“部分或全部取代”是指野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基可以被全部取代或者其中某些片段被部分取代,举例但不限于“第104~110位”、“第104~120位”、“第104~130位”、“第104~137位”、“第110~130位”或“第120~144位”。It should be noted that the "partial or complete replacement" means that the amino acid residues 104 to 144 of the wild-type respiratory syncytial virus pre-fusion F protein can be completely replaced or some fragments thereof can be partially replaced, including but not limited to "positions 104 to 110", "positions 104 to 120", "positions 104 to 130", "positions 104 to 137", "positions 110 to 130" or "positions 120 to 144".
在可选的实施方式中,所述半胱氨酸取代包括S55C、T189C、P101C或V152C中至少一种。In an alternative embodiment, the cysteine substitution comprises at least one of S55C, T189C, P101C or V152C.
在可选的实施方式中,所述半胱氨酸取代包括S55C和T189C,和/或,P101C和V152C。In alternative embodiments, the cysteine substitutions include S55C and T189C, and/or, P101C and V152C.
需要说明的是,半胱氨酸取代包括S55C和T189C,意指S55C和T189C两处取代同时存在,但并不意味着两处取代后的半胱氨酸之间必然形成二硫键连接。可以理解的是,这两处取代之后的半胱氨酸之间可以形成二硫键连接。It should be noted that the cysteine substitution includes S55C and T189C, which means that the two substitutions S55C and T189C exist at the same time, but it does not mean that the two substituted cysteines must form a disulfide bond connection. It is understandable that the two substituted cysteines can form a disulfide bond connection.
需要说明的是,半胱氨酸取代包括P101C和V152C,意指P101C和V152C两处取代同时存在,但并不意味着两处取代后的半胱氨酸之间必然形成二硫键连接。可以理解的是,这两处取代之后的半胱氨酸之间可以形成二硫键连接。It should be noted that the cysteine substitution includes P101C and V152C, which means that the two substitutions P101C and V152C exist at the same time, but it does not mean that the two substituted cysteines must form a disulfide bond connection. It is understandable that the two substituted cysteines can form a disulfide bond connection.
在可选的实施方式中,野生型呼吸道合胞病毒融合前F蛋白第104~137位氨基酸残基被连接肽全部取代。In an optional embodiment, amino acid residues 104 to 137 of the wild-type respiratory syncytial virus prefusion F protein are completely replaced by a connecting peptide.
在可选的实施方式中,所述连接肽的氨基酸序列为GSGSGGSGSGRS。In an optional embodiment, the amino acid sequence of the connecting peptide is GSGSGGSGSGRS.
在可选的实施方式中,野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽全部取代,所述连接肽的氨基酸序列为GSGSGRS或GS。In an optional embodiment, amino acid residues 104 to 144 of the wild-type respiratory syncytial virus pre-fusion F protein are all replaced by a connecting peptide, and the amino acid sequence of the connecting peptide is GSGSGRS or GS.
本公开提供生物材料,所述生物材料包括以下(a)~(d)中任一项:The present disclosure provides a biomaterial, which comprises any one of the following (a) to (d):
(a)编码权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白的核酸分子。(a) A nucleic acid molecule encoding the mutant respiratory syncytial virus pre-fusion F protein according to any one of claims 1 to 6.
(b)含有(a)所述核酸分子的重组载体,优选地,所述重组载体的原始质粒为pEE12.4。(b) A recombinant vector containing the nucleic acid molecule described in (a), preferably, the original plasmid of the recombinant vector is pEE12.4.
(c)含有(a)所述核酸分子或(b)所述重组载体的转化细胞,优选地,所述转化细胞的宿主细胞选自哺乳动物细胞、细菌、酵母、真菌或昆虫细胞。
(c) A transformed cell containing the nucleic acid molecule of (a) or the recombinant vector of (b), preferably, the host cell of the transformed cell is selected from mammalian cells, bacteria, yeast, fungi or insect cells.
进一步优选地,所述哺乳动物细胞选自中国仓鼠卵巢细胞(CHO)、肿瘤细胞、BHK细胞或HEK293细胞。Further preferably, the mammalian cell is selected from Chinese hamster ovary cells (CHO), tumor cells, BHK cells or HEK293 cells.
(d)含有(a)所述核酸分子或(b)所述重组载体的重组病毒,优选地,所述重组病毒包括腺病毒、腺相关病毒、牛痘病毒、疱疹病毒或逆转录病毒载体。(d) a recombinant virus containing the nucleic acid molecule described in (a) or the recombinant vector described in (b), preferably, the recombinant virus comprises an adenovirus, an adeno-associated virus, a vaccinia virus, a herpes virus or a retroviral vector.
本公开提供了前述实施方式任一项所述突变型呼吸道合胞病毒融合前F蛋白的制备方法,所述制备方法包括培养前述实施方式所述转化细胞或重组病毒,并诱导表达获得突变型呼吸道合胞病毒融合前F蛋白。The present disclosure provides a method for preparing the mutant respiratory syncytial virus pre-fusion F protein as described in any of the aforementioned embodiments, the preparation method comprising culturing the transformed cells or recombinant viruses as described in the aforementioned embodiments, and inducing expression to obtain the mutant respiratory syncytial virus pre-fusion F protein.
本公开提供前述实施方式任一项所述突变型呼吸道合胞病毒融合前F蛋白或生物材料在以下(a)~(c)中任一项的应用:The present disclosure provides the use of the mutant respiratory syncytial virus pre-fusion F protein or biomaterial described in any one of the aforementioned embodiments in any one of the following (a) to (c):
(a)制备呼吸道合胞病毒特异性抗体中的应用;(a) Application in the preparation of respiratory syncytial virus-specific antibodies;
(b)制备用于预防和/或治疗呼吸道合胞病毒感染的药物,优选地,所述药物包括重组蛋白疫苗、载体类疫苗或核酸疫苗;(b) preparing a medicament for preventing and/or treating respiratory syncytial virus infection, preferably, the medicament comprises a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine;
(c)制备呼吸道合胞病毒诊断试剂。(c) Preparation of respiratory syncytial virus diagnostic reagents.
本公开提供预防和/或治疗呼吸道合胞病毒感染的药物,包含前述实施方式任一项所述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料,或前述实施方式所述的呼吸道合胞病毒特异性抗体。The present disclosure provides a drug for preventing and/or treating respiratory syncytial virus infection, comprising the mutant respiratory syncytial virus pre-fusion F protein described in any one of the aforementioned embodiments, the aforementioned biological material, or the respiratory syncytial virus-specific antibody described in the aforementioned embodiments.
本公开提供一种药物组合物,所述药物组合物包含前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料或前述(a)所述的呼吸道合胞病毒特异性抗体;和药学上可接受的载体。The present disclosure provides a pharmaceutical composition, which comprises the mutant respiratory syncytial virus pre-fusion F protein, the biological material or the respiratory syncytial virus-specific antibody described in (a); and a pharmaceutically acceptable carrier.
本公开提供呼吸道合胞病毒诊断试剂,包含前述实施方式任一项所述突变型呼吸道合胞病毒融合前F蛋白,或前述实施方式所述的呼吸道合胞病毒特异性抗体。The present disclosure provides a respiratory syncytial virus diagnostic reagent, comprising the mutant respiratory syncytial virus pre-fusion F protein described in any one of the aforementioned embodiments, or the respiratory syncytial virus-specific antibody described in the aforementioned embodiments.
本公开提供了一种呼吸道合胞病毒诊断试剂,包含前述突变型呼吸道合胞病毒融合前F蛋白,或前述的呼吸道合胞病毒特异性抗体。The present disclosure provides a respiratory syncytial virus diagnostic reagent, comprising the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
本公开提供了用于预防和/或治疗呼吸道合胞病毒感染的方法,所述方法包括给予有需要的患者治疗有效量的前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料,或前述的呼吸道合胞病毒特异性抗体;The present disclosure provides a method for preventing and/or treating respiratory syncytial virus infection, the method comprising administering a therapeutically effective amount of the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody to a patient in need thereof;
可选地,所述突变型呼吸道合胞病毒融合前F蛋白、生物材料或呼吸道合胞病毒特异性抗体以重组蛋白疫苗、载体类疫苗或核酸疫苗的形式给予。Optionally, the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
本公开提供了用于诊断呼吸道合胞病毒感染的方法,所述方法包括使用前述突变型呼吸道合胞病毒融合前F蛋白,或前述的呼吸道合胞病毒特异性抗体的步骤。The present disclosure provides a method for diagnosing respiratory syncytial virus infection, comprising the step of using the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody.
本公开提供了前述突变型呼吸道合胞病毒融合前F蛋白,前述生物材料,或前述的呼吸道合胞病毒特异性抗体,用于预防和/或治疗呼吸道合胞病毒感染;The present disclosure provides the aforementioned mutant respiratory syncytial virus prefusion F protein, the aforementioned biological material, or the aforementioned respiratory syncytial virus-specific antibody for use in preventing and/or treating respiratory syncytial virus infection;
可选地,所述突变型呼吸道合胞病毒融合前F蛋白、生物材料或呼吸道合胞病毒特异性抗体以重组蛋白疫苗、载体类疫苗或核酸疫苗的形式给予。Optionally, the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
本公开提供了前述突变型呼吸道合胞病毒融合前F蛋白,或前述的呼吸道合胞病毒特异性抗体,用于诊断呼吸道合胞病毒感染。The present disclosure provides the aforementioned mutant respiratory syncytial virus pre-fusion F protein, or the aforementioned respiratory syncytial virus-specific antibody, for use in diagnosing respiratory syncytial virus infection.
优选地,本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白包括半胱氨酸取代突变S55C和T189C以及第104~137位氨基酸残基替换为GSGSGGSGSGRS的突变体,具备成为预防和/或治疗用呼吸道合胞病毒疫苗的组分之一。Preferably, the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations S55C and T189C and a mutant in which amino acid residues at positions 104 to 137 are replaced with GSGSGGSGSGRS, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
优选地,本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白包括半胱氨酸取代突变P101C和V152C,具备成为预防和/或治疗用呼吸道合胞病毒疫苗的组分之一。Preferably, the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations P101C and V152C, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
优选地,本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白包括半胱氨酸取代突变P101C和V152C以及第104~137位氨基酸残基替换为GSGSGGSGSGRS的突变体,具备成为预防和/或治疗用呼吸道合胞病毒疫苗的组分之一。Preferably, the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations P101C and V152C and a mutant in which amino acid residues at positions 104 to 137 are replaced with GSGSGGSGSGRS, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
优选地,本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白包括半胱氨酸取代突变S55C、T189C、P101C和V152C的突变体,具备成为预防和/或治疗用呼吸道合胞病毒疫苗的组分之一。Preferably, the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes mutants of cysteine substitution mutations S55C, T189C, P101C and V152C, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
优选地,本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白包括半胱氨酸取代突变S55C、T189C、P101C和V152C以及第104~137位氨基酸残基替换为GSGSGGSGSGRS的突变体,具备成为预防和/或治疗用呼吸道合胞病毒疫苗的组分之一。Preferably, the mutant respiratory syncytial virus prefusion F protein described in the present disclosure includes cysteine substitution mutations S55C, T189C, P101C and V152C, and a mutant in which the amino acid residues at positions 104 to 137 are replaced with GSGSGGSGSGRS, and is capable of becoming one of the components of a respiratory syncytial virus vaccine for prevention and/or treatment.
本公开中所述突变氨基酸残基位置以野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列SEQ ID No.01所示,该序列与GenBank登录号:P03420的氨基酸序列相比,存在P102A、I379V和M447V三处天然取代。另外,也可应用其他野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列作为模板,包括但不限于直接使用GenBank登录号:P03420的氨基酸序列,或者在P03420基础上含有1或2处天然取代等。
The position of the mutated amino acid residue in the present disclosure is shown in the amino acid sequence SEQ ID No. 01 of the wild-type respiratory syncytial virus prefusion F protein, which has three natural substitutions of P102A, I379V and M447V compared with the amino acid sequence of GenBank accession number: P03420. In addition, the amino acid sequence of other wild-type respiratory syncytial virus prefusion F protein can also be used as a template, including but not limited to directly using the amino acid sequence of GenBank accession number: P03420, or containing 1 or 2 natural substitutions on the basis of P03420.
术语“野生型”是指与天然存在的来源分离的基因或基因产物。野生型基因是群体中最常观察到的基因,并且因此被任意设计为基因的“正常”或“野生型”形式。相反,术语“经修饰的”,“突变体”或“变体”是指与野生型基因或基因产物相比显示序列的修饰(例如,取代、截短或插入),翻译后修饰和/或功能特性质(例如,改变的特性)的基因或基因产物。注意,天然存在的突变体可以被分离;通过与野生型基因或基因产物相比其具有改变的特性这一事实来鉴定这些突变体。用于引入或取代天然存在的氨基酸的方法在本领域是众所周知的。举例来说,可通过在编码突变单体的多核苷酸中的相关位置处用精氨酸的密码子(CGT)置换甲硫氨酸的密码子(ATG),而用精氨酸(R)来取代甲硫氨酸(M)。用于引入或取代非天然存在的氨基酸的方法在本领域也是众所周知的。The term "wild type" refers to a gene or gene product that is separated from a naturally occurring source. A wild-type gene is the most commonly observed gene in a population and is therefore arbitrarily designed to be the "normal" or "wild-type" form of a gene. In contrast, the term "modified", "mutant" or "variant" refers to a gene or gene product that shows sequence modification (e.g., substitution, truncation or insertion), post-translational modification and/or functional properties (e.g., altered properties) compared to a wild-type gene or gene product. Note that naturally occurring mutants can be isolated; these mutants are identified by the fact that they have altered properties compared to a wild-type gene or gene product. Methods for introducing or replacing naturally occurring amino acids are well known in the art. For example, methionine (M) can be replaced by arginine (R) by replacing the codon (ATG) for methionine at the relevant position in a polynucleotide encoding a mutant monomer. Methods for introducing or replacing non-naturally occurring amino acids are also well known in the art.
本公开中所述多种单克隆抗体均通过基因工程技术获得,根据已知抗体序列进行重组表达经亲和层析后获得高纯度抗体作为检测用抗体使用。F蛋白表面存在大量的中和与非中和抗原表位,与中和活性有关的抗原表位有4种(Ⅰ、Ⅱ、Ⅳ和Φ),其中Ⅰ、Ⅱ、Ⅳ共同存在于F蛋白融合前和融合后构象。本公开中使用了多种结合表位明确的单克隆抗体,概括表述为:D25(轻链和重链氨基酸序列分别如SEQ ID No.02和SEQ ID No.03所示,特异性识别融合前构象表位Φ)、AM14(轻链和重链氨基酸序列分别如SEQ ID No.04和SEQ ID No.05所示,特异性识别融合前三聚体构象,跨单体结合Ⅳ和Ⅴ表位)、MPE8(轻链和重链氨基酸序列分别如SEQ ID No.06和SEQ ID No.07所示,识别Ⅱ-Ⅴ表位,部分跨单体结合)、101F(轻链和重链氨基酸序列分别如SEQ ID No.08和SEQ ID No.09所示,识别Ⅳ表位)、Palivizumab(轻链和重链氨基酸序列分别如SEQ ID No.10和SEQ ID No.11所示,识别Ⅱ表位)、Motavizumab(轻链和重链氨基酸序列分别如SEQ ID No.12和SEQ ID No.13所示,识别Ⅱ表位)和Nirsevimab(轻链和重链氨基酸序列分别如SEQ ID No.14和SEQ ID No.15所示,特异性识别融合前构象表位Φ)。The various monoclonal antibodies described in the present disclosure are all obtained through genetic engineering technology, and high-purity antibodies are obtained after recombinant expression based on known antibody sequences and affinity chromatography for use as detection antibodies. There are a large number of neutralizing and non-neutralizing antigenic epitopes on the surface of the F protein, and there are 4 antigenic epitopes related to neutralizing activity (I, II, IV and Φ), of which I, II, and IV coexist in the pre-fusion and post-fusion conformations of the F protein. In the present disclosure, a variety of monoclonal antibodies with clear binding epitopes are used, which can be summarized as: D25 (the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.02 and SEQ ID No.03, respectively, and specifically recognize the pre-fusion conformation epitope Φ), AM14 (the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.04 and SEQ ID No.05, respectively, and specifically recognize the pre-fusion trimer conformation, and bind to epitopes Ⅳ and Ⅴ across monomers), MPE8 (the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.06 and SEQ ID No.07, respectively, and recognize epitopes Ⅱ-Ⅴ, and partially bind across monomers), 101F (the amino acid sequences of the light chain and The amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.08 and SEQ ID No.09, respectively, recognizing epitope IV), Palivizumab (the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.10 and SEQ ID No.11, respectively, recognizing epitope II), Motavizumab (the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.12 and SEQ ID No.13, respectively, recognizing epitope II) and Nirsevimab (the amino acid sequences of the light chain and heavy chain are shown in SEQ ID No.14 and SEQ ID No.15, respectively, specifically recognizing the pre-fusion conformational epitope Φ).
本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白可应用基因工程技术通过重组表达获得,例如中国仓鼠卵巢细胞(CHO)、肿瘤细胞系、BHK细胞、HEK293细胞系等哺乳动物细胞或细菌、酵母、真菌、昆虫细胞等,或转基因动物,或转基因植物。亦或者通过病毒载体形式将本公开所述突变蛋白递送至目标宿主细胞中,例如使用腺病毒(人的和黑猩猩的)、腺相关病毒、牛痘病毒、疱疹病毒、逆转录病毒载体等。亦或者通过裸露或包封后的核酸载体形式将本公开所述突变蛋白递送至目标宿主细胞中,例如使用线性RNA、环状RNA、dsDNA、cDNA等。亦或者本专业领域常用或已知的形式获得突变蛋白。A mutant respiratory syncytial virus prefusion F protein described in the present disclosure can be obtained by recombinant expression using genetic engineering technology, such as Chinese hamster ovary cells (CHO), tumor cell lines, BHK cells, HEK293 cell lines and other mammalian cells or bacteria, yeast, fungi, insect cells, etc., or transgenic animals, or transgenic plants. Alternatively, the mutant protein described in the present disclosure is delivered to the target host cell in the form of a viral vector, such as adenovirus (human and chimpanzee), adeno-associated virus, vaccinia virus, herpes virus, retroviral vector, etc. Alternatively, the mutant protein described in the present disclosure is delivered to the target host cell in the form of a naked or encapsulated nucleic acid vector, such as using linear RNA, circular RNA, dsDNA, cDNA, etc. Alternatively, the mutant protein is obtained in a commonly used or known form in this professional field.
本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白突变形式还可在本公开所述突变形式的基础上添加其他突变以稳定或提高融合前构象活性或表达量,例如加入脯氨酸点突变以获得二级/三级结构的刚性固定,加入带有侧链基团的氨基酸点突变以获得空腔填充效应,加入疏水氨基酸点突变以获得疏水效应,加入带电氨基酸点突变以获得静电加强或减弱效果,加入分子间二硫键以获得单体F蛋白分子间的共价连接,在F蛋白C端加入异源标签以提高F蛋白三聚体的稳定性和表达量,在F蛋白两端加入柔性氨基酸链以形成Loop串联结构,在F蛋白C端加入具有α螺旋结构的氨基酸链以提高F蛋白三聚体的稳定性,加入具有改变结构功能的氨基酸链等,亦或者本专业领域常用或已知的突变方式或手段。A mutant respiratory syncytial virus pre-fusion F protein mutant form described in the present disclosure can also add other mutations on the basis of the mutant form described in the present disclosure to stabilize or improve the pre-fusion conformational activity or expression level, such as adding proline point mutations to obtain rigid fixation of the secondary/tertiary structure, adding amino acid point mutations with side chain groups to obtain cavity filling effects, adding hydrophobic amino acid point mutations to obtain hydrophobic effects, adding charged amino acid point mutations to obtain electrostatic strengthening or weakening effects, adding intermolecular disulfide bonds to obtain covalent connections between monomeric F protein molecules, adding heterologous tags to the C-terminus of the F protein to improve the stability and expression level of the F protein trimer, adding flexible amino acid chains at both ends of the F protein to form a Loop tandem structure, adding an amino acid chain with an α-helical structure to the C-terminus of the F protein to improve the stability of the F protein trimer, adding an amino acid chain with a structural change function, etc., or mutation methods or means commonly used or known in this professional field.
本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白相比于同类品具有优异的中和抗体结合活性和热稳定性,适宜于开发成为呼吸道合胞病毒疫苗的组分之一。The mutant respiratory syncytial virus pre-fusion F protein described in the present disclosure has excellent neutralizing antibody binding activity and thermal stability compared with similar products, and is suitable for development as one of the components of the respiratory syncytial virus vaccine.
下面结合附图,对本公开的一些实施方式作详细说明。在不冲突的情况下,下述的实施例及实施例中的特征可以相互组合。In conjunction with the accompanying drawings, some embodiments of the present disclosure are described in detail below. In the absence of conflict, the following embodiments and features in the embodiments can be combined with each other.
实施例1:构象稳定的呼吸道合胞病毒融合前F蛋白的二硫键突变设计和活性筛选Example 1: Disulfide bond mutation design and activity screening of conformationally stable respiratory syncytial virus prefusion F protein
通过研究呼吸道合胞病毒融合前F蛋白的空间结构,根据结构生物学原理设计可稳定其融合前构象的氨基酸突变。以野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列SEQ ID No.01或其他野生型病毒株F蛋白氨基酸序列为模板,通过加入分子内二硫键突变以增强融合前F1亚基和F2亚基之间或F1内部的结构稳定性以阻止七肽重复区HRA和HRB区域的构象转变,同时维持或增强Φ表位等重要位点的结合活性,提高突变抗原的融合前F蛋白特异性免疫原性。另外,为实现F蛋白的可溶性表达,在质粒构建时将F蛋白C端的跨膜区域514~574aa替换为“SAIGGYIPEAPRDGQAYVRKDGEWVLLSTFL(SEQ ID No.47)”,该片段为可溶性T4Fibritin三聚化结构域,以维持F蛋白的三聚体结构。按照上述目标设计二硫键突变如表1所示,详细序列见SEQ ID No.16~No.29。By studying the spatial structure of the pre-fusion F protein of respiratory syncytial virus, amino acid mutations that can stabilize its pre-fusion conformation were designed according to the principles of structural biology. Using the amino acid sequence of the pre-fusion F protein of wild-type respiratory syncytial virus SEQ ID No.01 or the amino acid sequence of the F protein of other wild-type virus strains as a template, intramolecular disulfide bond mutations were added to enhance the structural stability between the pre-fusion F1 subunit and the F2 subunit or within the F1 to prevent the conformational transition of the HRA and HRB regions of the heptapeptide repeat region, while maintaining or enhancing the binding activity of important sites such as the Φ epitope, thereby improving the pre-fusion F protein-specific immunogenicity of the mutant antigen. In addition, in order to achieve soluble expression of the F protein, the transmembrane region 514 to 574aa at the C-terminus of the F protein was replaced with "SAIGGYIPEAPRDGQAYVRKDGEWVLLSTFL (SEQ ID No.47)" during plasmid construction. This fragment is a soluble T4Fibritin trimerization domain to maintain the trimer structure of the F protein. The disulfide bond mutations designed according to the above objectives are shown in Table 1, and the detailed sequences are shown in SEQ ID No.16 to No.29.
表1.二硫键突变抗原设计
Table 1. Disulfide bond mutation antigen design
Table 1. Disulfide bond mutation antigen design
(2)通过基因工程技术,将表1所述的突变抗原核苷酸序列插入至pEE 12.4表达载体(质粒图谱见图1,核苷酸序列如SEQ ID No.30所示)序列中后进行全质粒合成。使用TransIT-X2TM Dynamic Delivery System(Mirus,MIR6003)或LipofectamineTM 3000(Invitrogen,L3000001)转染试剂盒将突变质粒转染至六孔板中培养的HEK 293T细胞,持续培养72h后收集上清培养液进行Western Blot蛋白免疫印迹确认目的蛋白表达情况,一抗Motavizumab,二抗Direct-BlotTM HRP anti-human IgG1Fc Antibody(BioLegend,410603)。将确认表达正常的突变质粒使用ExpiCHOTM表达系统试剂盒(Gibco,A29133)或其他方法瞬转至200mL体积的ExpiCHO-STM(Gibco,A29127)悬浮细胞培养液中,持续培养2~3天后离心收集上清培养液。通过离子交换层析和/或陶瓷羟基磷灰石层析和/或凝胶分子筛层析对目的蛋白进行纯化,最终检测并统计各突变质粒的表达情况,结果如表2所示,使用DS-Cav1(SEQ ID No.31)、SC-TM(SEQ ID No.32)和pXCS852(SEQ ID No.33)作为阳性对照。其中YD03、YD06、YD07、YD12、YD13、YD16、YD22突变抗原表达正常。(2) By genetic engineering technology, the mutant antigen nucleotide sequence described in Table 1 was inserted into the pEE 12.4 expression vector (see Figure 1 for the plasmid map, and the nucleotide sequence is shown in SEQ ID No. 30) and then the whole plasmid was synthesized. The mutant plasmid was transfected into HEK 293T cells cultured in six-well plates using TransIT-X2 TM Dynamic Delivery System (Mirus, MIR6003) or Lipofectamine TM 3000 (Invitrogen, L3000001) transfection kit. After continuous culture for 72 hours, the supernatant culture fluid was collected for Western Blot protein immunoblotting to confirm the expression of the target protein, the primary antibody Motavizumab, the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody (BioLegend, 410603). The mutant plasmids confirmed to be expressed normally were transiently transferred to 200 mL of ExpiCHO-S TM (Gibco, A29127) suspension cell culture medium using the ExpiCHO TM expression system kit (Gibco, A29133) or other methods, and the supernatant culture medium was collected by centrifugation after continuous culture for 2 to 3 days. The target protein was purified by ion exchange chromatography and/or ceramic hydroxyapatite chromatography and/or gel molecular sieve chromatography, and the expression of each mutant plasmid was finally detected and counted. The results are shown in Table 2, and DS-Cav1 (SEQ ID No. 31), SC-TM (SEQ ID No. 32) and pXCS852 (SEQ ID No. 33) were used as positive controls. Among them, YD03, YD06, YD07, YD12, YD13, YD16, and YD22 mutant antigens were expressed normally.
其中,“DS-Cav1”为美国国家过敏和传染病研究所(NIAID)的团队开发的第一个融合前构象F蛋白,通过在F1片段内S155C和S290C点突变获得分子内二硫键,同时加入S190F和V207L点突变以增强关键中和表位的结合活性(DOI:10.1126/science.1243283)。“pXCS852”为辉瑞公司公开专利(CN201680075615.8)实施例中提到的一种突变体“pXCS852”,在保留pep27的基础上通过加入S55C和L188C分子内二硫键,以及T54H和D486S点突变用于增强融合前构象的稳定性和表位活性。Among them, "DS-Cav1" is the first pre-fusion conformation F protein developed by the team of the National Institute of Allergy and Infectious Diseases (NIAID) of the United States. The intramolecular disulfide bond is obtained by S155C and S290C point mutations in the F1 fragment, and S190F and V207L point mutations are added to enhance the binding activity of the key neutralizing epitope (DOI: 10.1126/science.1243283). "pXCS852" is a mutant "pXCS852" mentioned in the embodiment of Pfizer's public patent (CN201680075615.8). On the basis of retaining pep27, S55C and L188C intramolecular disulfide bonds, as well as T54H and D486S point mutations are added to enhance the stability and epitope activity of the pre-fusion conformation.
表2.突变抗原的表达情况
Table 2. Expression of mutant antigens
Table 2. Expression of mutant antigens
(3)进一步对纯化后的突变抗原进行表位活性检测,使用六种针对不同表位的单克隆抗体D25、AM14、MPE8、Palivizumab、Motavizumab和Nirsevimab(轻链和重链序列分别如SEQ ID No.02-05中任一项所述,详见前述)作为一抗检测与各突变抗原的结合情况。操作方法简单表述为,将纯化后的突变抗原稀释至1.1μg/孔或3.3μg/孔,3倍梯度稀释7个浓度点,使用包被缓冲液包被抗原至96孔板中,2h后加入封闭液过夜,依次加入一抗和二抗Direct-BlotTM HRP anti-human IgG1Fc Antibody孵育后TMB显色(Solarbio,PR1210),酶标仪检测450nm处吸收,统计并分析数据(如图2所示),使用DS-Cav1和SC-TM作为阳性对照。相比较下,YD12和YD22与D25有较强结合,YD16与D25有结合,YD03、YD06、YD07和YD13与D25结合较弱;YD12和YD22与AM14有较强结合,其余抗原结合较弱;YD12、YD22与MPE8有较强结合,YD03和YD16与MPE8有结合,YD06、YD07和YD13与MPE8结合较弱;YD12与Palivizumab结合最强,YD07与Palivizumab结合最弱,其余抗原都有结合;各抗原与Motavizumab都有结合;YD12和YD22与Nirsevimab有较强结合、YD16与Nirsevimab有结合,YD03、YD06、YD07和YD13与Nirsevimab结合较弱,因Nirsevimab与D25同属Φ表位,因此结合趋势一致。综上分析,ELISA结果显示YD12和YD22与各单抗有着较佳的结合活性,其中AM14结合活性要显著优于阳性对照组的DS-Cav1和SC-TM,表现出优异的四级结构稳定性。(3) The purified mutant antigens were further subjected to epitope activity detection, and six monoclonal antibodies D25, AM14, MPE8, Palivizumab, Motavizumab and Nirsevimab (the light chain and heavy chain sequences are described in any one of SEQ ID No. 02-05, respectively, as described above) were used as primary antibodies to detect the binding of each mutant antigen. The operation method is simply described as follows: the purified mutant antigens were diluted to 1.1 μg/well or 3.3 μg/well, 3-fold gradient dilution to 7 concentration points, and the antigens were coated in a 96-well plate using a coating buffer. After 2 hours, the blocking solution was added overnight, and the primary antibody and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation and TMB color development (Solarbio, PR1210) was performed. The absorption at 450 nm was detected by an enzyme reader, and the data were counted and analyzed (as shown in Figure 2), and DS-Cav1 and SC-TM were used as positive controls. In comparison, YD12 and YD22 have strong binding to D25, YD16 has binding to D25, YD03, YD06, YD07 and YD13 have weak binding to D25; YD12 and YD22 have strong binding to AM14, and the other antigens have weak binding; YD12 and YD22 have strong binding to MPE8, YD03 and YD16 have binding to MPE8, YD06, YD07 and YD13 have weak binding to MPE8; YD12 has strong binding to Palivizu Mab binding was the strongest, YD07 had the weakest binding to Palivizumab, and the rest of the antigens were bound; each antigen was bound to Motavizumab; YD12 and YD22 had strong binding to Nirsevimab, YD16 had binding to Nirsevimab, and YD03, YD06, YD07 and YD13 had weak binding to Nirsevimab. Because Nirsevimab and D25 belong to the same Φ epitope, the binding trends were consistent. In summary, the ELISA results showed that YD12 and YD22 had better binding activity with each monoclonal antibody, among which AM14 had significantly better binding activity than DS-Cav1 and SC-TM in the positive control group, showing excellent quaternary structure stability.
(4)使用非标记生物分子分析仪GatorPrime Plus(Gator Bio)检测各突变抗原与七种不同单克隆抗体D25、AM14、MPE8、101F、Palivizumab、Motavizumab和Nirsevimab的结合力,操作方法简单表述为:使用HFC(Anti-Human IgG Fc,Gator Bio)光学探针固化七种不同的单克隆抗体后与不同的突变抗原蛋白进行结合至饱和状态,转移探针至解离缓冲液后监测位移信号(nm),通过设备数据处理软件计算各突变抗原的解离常数值(Koff)如表3所示。使用DS-Cav1、SC-TM和pXCS852作为阳性对照。由此可见,YD03、YD12和YD22与七种单克隆抗体有着非常优秀的结合能力,体现出突变的二硫键可稳定融合前F蛋白构象并保持原始表位活性。另外,相比于DS-Cav1和SC-TM,pXCS852的各表位活性相对较弱,且与D25和AM14结合活性弱于YD12和YD22。(4) The non-labeled biomolecular analyzer GatorPrime Plus (Gator Bio) was used to detect the binding ability of each mutant antigen with seven different monoclonal antibodies D25, AM14, MPE8, 101F, Palivizumab, Motavizumab and Nirsevimab. The operation method is simply described as follows: After the seven different monoclonal antibodies are immobilized with HFC (Anti-Human IgG Fc, Gator Bio) optical probes, they are bound to different mutant antigen proteins until saturation, and the displacement signal (nm) is monitored after the probes are transferred to the dissociation buffer. The dissociation constant value (K off ) of each mutant antigen is calculated by the equipment data processing software as shown in Table 3. DS-Cav1, SC-TM and pXCS852 were used as positive controls. It can be seen that YD03, YD12 and YD22 have very good binding ability with the seven monoclonal antibodies, reflecting that the mutated disulfide bond can stabilize the pre-fusion F protein conformation and maintain the original epitope activity. In addition, compared with DS-Cav1 and SC-TM, the epitope activities of pXCS852 were relatively weak, and its binding activity with D25 and AM14 was weaker than that with YD12 and YD22.
表3.突变抗原与七种不同单抗的亲和力检测
*表格内数值为解离常数(Koff)×105,单位为1/s;**NB代表没有检测到结合信号;***ND代表没有检测
到解离信号Table 3. Affinity test of mutant antigens and seven different monoclonal antibodies
*The values in the table are dissociation constants (K off )×10 5 , in 1/s; **NB means no binding signal was detected; ***ND means no dissociation signal was detected
*表格内数值为解离常数(Koff)×105,单位为1/s;**NB代表没有检测到结合信号;***ND代表没有检测
到解离信号Table 3. Affinity test of mutant antigens and seven different monoclonal antibodies
*The values in the table are dissociation constants (K off )×10 5 , in 1/s; **NB means no binding signal was detected; ***ND means no dissociation signal was detected
实施例2:呼吸道合胞病毒融合前F蛋白的连接肽设计和活性筛选Example 2: Design of connecting peptides and activity screening of respiratory syncytial virus prefusion F protein
(1)天然的野生型F蛋白首先是形成F0前体蛋白再经弗林蛋白酶切后释放出一个由27个氨基酸组成的多肽pep27,形成以两对二硫键相连接的F1和F2片段,三个F0单体经酶切处理后自组装形成一个处于亚稳定状态的融合前三聚体构象,此过程有序且复杂,细胞代谢状态和F0前体蛋白表达量等因素都会直接影响最终融合前F蛋白三聚体的产量和构象。本公开将pep27替换为更短的连接肽,同时敲除FCS1和FCS2两个酶切位点,从而增加F0前体表达量及融合前F三聚体的产量,更为重要的是,连接肽的替换可锁定F1片段N端的FP融合区域与F2片段的连接,达到进一步稳定融合前构象的目的。同时,连接肽序列的选择会影响到该区域附近的带电和疏水情况,从而影响融合前F蛋白的表位活性。本公开根据结构生物学原理,应用生物信息学分析和蛋白质结构预测等方法设计了三种替换连接肽,分别命名为GS12、GRS12和Q4,具体序列如表4所示。所有突变的连接肽以野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列SEQ ID No.01为模板进行改造,插入至质粒pEE12.4(SEQ ID No.30)后进行全质粒合成。另外,为实现F蛋白的可溶性表达,在质粒构建时将F蛋白C端的跨膜区域514~574aa替换为“SAIGGYIPEAPRDGQAYVRKDGEWVLLSTFL”,该片段为可溶性T4Fibritin三聚化结构域,以维持F蛋白的三聚体结构。(1) The natural wild-type F protein first forms the F0 precursor protein and then releases a polypeptide pep27 composed of 27 amino acids after being cleaved by furin, forming F1 and F2 fragments connected by two pairs of disulfide bonds. The three F0 monomers are self-assembled after enzyme cleavage to form a pre-fusion trimer conformation in a metastable state. This process is orderly and complex. Factors such as cell metabolic state and F0 precursor protein expression will directly affect the final pre-fusion F protein trimer yield and conformation. The present disclosure replaces pep27 with a shorter connecting peptide and knocks out the two enzyme cleavage sites FCS1 and FCS2 at the same time, thereby increasing the F0 precursor expression and the yield of the pre-fusion F trimer. More importantly, the replacement of the connecting peptide can lock the connection between the FP fusion region at the N-terminus of the F1 fragment and the F2 fragment, thereby achieving the purpose of further stabilizing the pre-fusion conformation. At the same time, the selection of the connecting peptide sequence will affect the charge and hydrophobicity near the region, thereby affecting the epitope activity of the pre-fusion F protein. According to the principles of structural biology, the present invention uses bioinformatics analysis and protein structure prediction methods to design three replacement connecting peptides, which are named GS12, GRS12 and Q4, respectively. The specific sequences are shown in Table 4. All mutated connecting peptides were modified using the amino acid sequence SEQ ID No.01 of the wild-type respiratory syncytial virus prefusion F protein as a template, and then inserted into the plasmid pEE12.4 (SEQ ID No.30) for full plasmid synthesis. In addition, in order to achieve soluble expression of F protein, the transmembrane region 514 to 574aa at the C-terminus of F protein was replaced with "SAIGGYIPEAPRDGQAYVRKDGEWVLLSTFL" during plasmid construction. This fragment is a soluble T4Fibritin trimerization domain to maintain the trimer structure of F protein.
“SC-TM”结构通过三个点突变(N67I、S215P、E487Q)并将pep27区域替换为连接肽的方式获得了中和活性较高的融合前构象(杨森制药公司(Janssen),DOI:10.1038/ncomms9143)。The “SC-TM” structure acquired a prefusion conformation with higher neutralizing activity by means of three point mutations (N67I, S215P, E487Q) and replacement of the pep27 region with a linker peptide (Janssen Pharmaceuticals, DOI: 10.1038/ncomms9143).
表4.连接肽的氨基酸序列和质粒信息
Table 4. Amino acid sequence and plasmid information of the connecting peptide
Table 4. Amino acid sequence and plasmid information of the connecting peptide
(2)将合成后的质粒使用ExpiCHOTM表达系统试剂盒或其他方法瞬转至200mL体积的ExpiCHO-STM悬浮细胞培养液中,持续培养2~3天后离心收集上清培养液。将纯化后抗原稀释至特定蛋白浓度,使用包被缓冲液包被抗原至96孔板中,2h后加入封闭液过夜,依次加入一抗和二抗Direct-BlotTM HRP anti-human IgG1Fc Antibody孵育后TMB显色,酶标仪检测450nm处吸收,数据处理后如图3所示,使用SC-TM作为阳性对照。由结果可观察到在三种不同的替换连接肽中,与GS12和Q4相比,GRS12连接肽突变抗原与五种不同的单克隆抗体(D25、AM14、MPE8、101F和Motavizumab)有着更好的结合活性。同时,在表达水平上GRS12突变抗原与SC-TM无显著性差异。由此可见,GRS12连接肽具备提高表达量且保持融合前构象的潜在能力。(2) The synthesized plasmid was transiently transferred into 200 mL of ExpiCHO-S TM suspension cell culture medium using the ExpiCHO TM expression system kit or other methods. After continuous culture for 2 to 3 days, the supernatant culture medium was collected by centrifugation. The purified antigen was diluted to a specific protein concentration, and the antigen was coated in a 96-well plate using a coating buffer. After 2 hours, a blocking solution was added overnight. The primary antibody and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation. TMB color was developed, and the absorption at 450 nm was detected by an enzyme reader. After data processing, it was shown in Figure 3. SC-TM was used as a positive control. From the results, it can be observed that among the three different replacement linker peptides, the GRS12 linker peptide mutant antigen has better binding activity with five different monoclonal antibodies (D25, AM14, MPE8, 101F and Motavizumab) compared with GS12 and Q4. At the same time, there was no significant difference in the expression level between the GRS12 mutant antigen and SC-TM. This shows that the GRS12 linker peptide has the potential to increase expression and maintain the pre-fusion conformation.
实施例3:构象稳定的呼吸道合胞病毒融合前F蛋白的双因素突变设计和活性筛选Example 3: Dual-factor mutation design and activity screening of conformationally stable respiratory syncytial virus prefusion F protein
在分子内二硫键突变筛选和连接肽筛选的基础之上,本公开将两种不同策略筛选得到的优选结果进行了结合筛选,即双因素突变筛选。根据融合前F蛋白的特性,本公开以期获得一种具有融合前构象、高表达能力、高表位结合活性并且稳定的突变抗原,从而开发成为一种具有预防或治疗RSV感染能力的重组蛋白。分子内二硫键突变选择S55C-T189C(YD03)、P101C-V152C(YD12)和两对二硫键同时突变(YD22),将GRS12连接肽突变加入至上述三种二硫键突变形成YD03-1(SEQ ID No.42)、YD12-1(SEQ ID No.43)和YD22-1(SEQ ID No.44)。同时,为进一步考察连接肽长度对融合前构象的影响,以YD12为模板加入GSGSGRS和GS两种长度的连接肽突变,形成YD12-2(SEQ ID No.45)和YD12-3(SEQ ID No.46),所有突变质粒信息如表5所示。On the basis of intramolecular disulfide bond mutation screening and connecting peptide screening, the present disclosure combines the preferred results obtained by two different strategies for screening, i.e., dual-factor mutation screening. According to the characteristics of the pre-fusion F protein, the present disclosure aims to obtain a mutant antigen with a pre-fusion conformation, high expression ability, high epitope binding activity and stability, thereby developing a recombinant protein with the ability to prevent or treat RSV infection. The intramolecular disulfide bond mutations selected S55C-T189C (YD03), P101C-V152C (YD12) and two pairs of disulfide bonds mutated simultaneously (YD22), and the GRS12 connecting peptide mutation was added to the above three disulfide bond mutations to form YD03-1 (SEQ ID No. 42), YD12-1 (SEQ ID No. 43) and YD22-1 (SEQ ID No. 44). At the same time, in order to further investigate the effect of the length of the connecting peptide on the pre-fusion conformation, two connecting peptide mutations of different lengths, GSGSGRS and GS, were added using YD12 as a template to form YD12-2 (SEQ ID No.45) and YD12-3 (SEQ ID No.46). The information of all mutant plasmids is shown in Table 5.
表5.双因素突变筛选的抗原信息
Table 5. Antigen information of dual-factor mutation screening
Table 5. Antigen information of dual-factor mutation screening
与实施例2中所述方法相同,将合成后的质粒使用ExpiCHOTM表达系统试剂盒或其他方法瞬转至200mL体积的ExpiCHO-STM悬浮细胞培养液中,持续培养2-3天后离心收集上清培养液。将纯化后的抗原蛋白进行还原性SDS-PAGE电泳(SurePAGETM,Genscript)检测抗原单体分子量和纯度,Western Blot蛋白免疫印迹检测抗原(一抗:Motavizumab,二抗:Direct-BlotTM HRP anti-human IgG1 Fc Antibody),ECL化学发光超敏显色(碧云天,P0018AM),同时使用DS-Cav1和SC-TM作为阳性对照,结果如图4所示。所表达的8种突变抗原单体分子量大小与理论相符,仔细比对SDS-PAGE和Western Blot条带确认蛋白电泳部分杂带属于抗原相关条带,各突变抗原纯度满足后续实验要求。The same method as described in Example 2, the synthesized plasmid was transiently transferred to 200mL volume of ExpiCHO-S TM suspension cell culture medium using ExpiCHO TM expression system kit or other methods, and the supernatant culture medium was collected by centrifugation after continuous culture for 2-3 days. The purified antigen protein was subjected to reducing SDS-PAGE electrophoresis (SurePAGE TM , Genscript) to detect the molecular weight and purity of the antigen monomer, Western Blot protein immunoblotting to detect the antigen (primary antibody: Motavizumab, secondary antibody: Direct-Blot TM HRP anti-human IgG1 Fc Antibody), ECL chemiluminescence ultrasensitive color development (Biyuntian, P0018AM), and DS-Cav1 and SC-TM were used as positive controls, and the results are shown in Figure 4. The molecular weights of the 8 mutant antigen monomers expressed were consistent with the theory, and the SDS-PAGE and Western Blot bands were carefully compared to confirm that the miscellaneous bands of the protein electrophoresis part belonged to the antigen-related bands, and the purity of each mutant antigen met the requirements of subsequent experiments.
使用PierceTM BCA蛋白定量试剂盒(Thermo,23225)检测各纯化后蛋白浓度后计算抗原表达量,结果如表6所示。可以观察到连接肽突变的加入显著增加了二硫键突变抗原的表达量,其中YD03-1相比YD03表达量增加了2.64倍,YD12-1相比YD12表达量增加了6.37倍,YD22-1相比YD22表达量增加了8倍,YD12-1、YD12-2和YD12-3相比DS-Cav1表达量分别高出18.06倍、14.28倍和17.04倍,YD12-1、YD12-2和YD12-3相比SC-TM表达量分别高出2.49倍、1.97倍和2.35倍,具备显著的高表达量特性。The concentration of each purified protein was detected using Pierce TM BCA protein quantification kit (Thermo, 23225) and the antigen expression was calculated. The results are shown in Table 6. It can be observed that the addition of the linker peptide mutation significantly increased the expression of the disulfide bond mutant antigen, among which the expression of YD03-1 increased by 2.64 times compared with YD03, the expression of YD12-1 increased by 6.37 times compared with YD12, and the expression of YD22-1 increased by 8 times compared with YD22. The expression of YD12-1, YD12-2 and YD12-3 was 18.06 times, 14.28 times and 17.04 times higher than that of DS-Cav1, respectively, and the expression of YD12-1, YD12-2 and YD12-3 was 2.49 times, 1.97 times and 2.35 times higher than that of SC-TM, respectively, with significant high expression characteristics.
表6.双因素突变抗原的表达情况
Table 6. Expression of dual-factor mutant antigens
Table 6. Expression of dual-factor mutant antigens
应用分子排阻色谱法检测纯化后抗原的纯度和分子量,检测设备为安捷伦1260高效液相色谱仪,色谱柱使用安捷伦Advance Bio SEC 300A(7.8×300mm),流动相选择甲酸铵缓冲体系,流速控制0.5~1.0mL/min,DAD检测器监测OD280信号,结果如图5所示。根据分子排阻色谱原理可以分析得到各突变抗原的分子大小从大到小依次为YD03-1、YD03、YD12-2、YD12-3、YD22、YD12、DS-Cav1、YD12-1、YD22-1、SC-TM。各纯化后抗原色谱检测均为单一蛋白峰,满足纯度要求。The purity and molecular weight of the purified antigens were detected by size exclusion chromatography. The detection equipment was an Agilent 1260 high performance liquid chromatograph, the chromatographic column used was Agilent Advance Bio SEC 300A (7.8×300mm), the mobile phase selected was an ammonium formate buffer system, the flow rate was controlled at 0.5-1.0 mL/min, and the DAD detector monitored the OD280 signal. The results are shown in Figure 5. According to the principle of size exclusion chromatography, the molecular sizes of the mutant antigens can be analyzed from large to small, in the order of YD03-1, YD03, YD12-2, YD12-3, YD22, YD12, DS-Cav1, YD12-1, YD22-1, and SC-TM. The chromatographic detection of each purified antigen was a single protein peak, which met the purity requirements.
与实施例1中所述方法相似,使用非标记生物分子分析仪GatorPrime Plus(Gator Bio)检测各突变抗原与七种不同单克隆抗体D25、AM14、MPE8、101F、Palivizumab、Motavizumab和Nirsevimab的结
合力,操作方法简单表述为:首先使用生物素标记待测突变抗原,使用SA(Streptavidin,Gator Bio)光学探针固化突变抗原后与不同的单克隆抗体进行分子间亲和力检测,通过设备数据处理软件计算各突变抗原的亲和常数,结果如表7所示,使用DS-Cav1和SC-TM作为阳性对照。其中,对比YD03和YD03-1、YD12和YD12-1、YD22和YD22-1,可以观察到GRS12连接肽突变的加入增强了上述抗原与D25、AM14和MPE8的亲和力。对比YD12-1、YD12-2和YD12-3与D25、AM14和MPE8的亲和力可以观察到连接肽的长度会影响亲和力强弱。特别值得注意的是,对比YD22-1和YD22的D25(识别Φ位点,关键中和表位)、AM14(特异性识别三聚体四级结构)和MPE8(识别四级结构)亲和力分别增强了至少1000倍、20倍和1000倍,证明GRS12连接肽突变具备显著增强融合前构象的能力,且同时还增加了8倍表达量。YD22-1与SC-TM对比各单克隆抗体的亲和力均处于同一水平且显著优于DS-Cav1,YD22-1具有预防或治疗RSV感染的潜在能力。Similar to the method described in Example 1, the binding of each mutant antigen to seven different monoclonal antibodies, D25, AM14, MPE8, 101F, Palivizumab, Motavizumab and Nirsevimab, was detected using a non-labeled biomolecular analyzer, Gator Prime Plus (Gator Bio). The operation method is simply described as follows: first, the mutant antigen to be tested is labeled with biotin, and the mutant antigen is solidified with SA (Streptavidin, Gator Bio) optical probe, and then the intermolecular affinity is detected with different monoclonal antibodies. The affinity constant of each mutant antigen is calculated by the equipment data processing software. The results are shown in Table 7. DS-Cav1 and SC-TM are used as positive controls. Among them, by comparing YD03 and YD03-1, YD12 and YD12-1, YD22 and YD22-1, it can be observed that the addition of the GRS12 connecting peptide mutation enhances the affinity of the above antigens with D25, AM14 and MPE8. By comparing the affinity of YD12-1, YD12-2 and YD12-3 with D25, AM14 and MPE8, it can be observed that the length of the connecting peptide affects the affinity. It is particularly noteworthy that the affinity of D25 (recognition of Φ site, key neutralization epitope), AM14 (specific recognition of trimer quaternary structure) and MPE8 (recognition of quaternary structure) of YD22-1 and YD22 was enhanced by at least 1000 times, 20 times and 1000 times respectively, proving that the GRS12 connecting peptide mutation has the ability to significantly enhance the pre-fusion conformation and also increased the expression level by 8 times. The affinity of each monoclonal antibody of YD22-1 and SC-TM is at the same level and significantly better than DS-Cav1. YD22-1 has the potential to prevent or treat RSV infection.
表7.双因素突变抗原与七种不同单抗的亲和力检测
*表格内数值为亲和常数(KD),单位为nM;**NB代表没有检测到结合信号Table 7. Affinity test of dual-factor mutant antigens and seven different monoclonal antibodies
*The values in the table are affinity constants (KD), in nM; **NB means no binding signal was detected
*表格内数值为亲和常数(KD),单位为nM;**NB代表没有检测到结合信号Table 7. Affinity test of dual-factor mutant antigens and seven different monoclonal antibodies
*The values in the table are affinity constants (KD), in nM; **NB means no binding signal was detected
进一步考察双因素突变抗原对融合前构象的增强效果,将纯化后抗原稀释至特定蛋白浓度,使用包被缓冲液包被抗原至96孔板中,2h后加入封闭液过夜,依次加入一抗AM14和二抗Direct-BlotTM HRP anti-human IgG1Fc Antibody孵育后TMB显色,酶标仪检测450nm处吸收,数据处理后如图6所示,使用DS-Cav1和SC-TM作为阳性对照。与亲和力检测结果趋势一致,YD22-1表现出优异的融合前三聚体构象的结合能力,显著优于SC-TM和其他抗原,同时相比YD22有着极其显著的提升,证明GRS12连接肽具备增强融合前构象的效果。To further investigate the enhancement effect of the double-factor mutant antigen on the pre-fusion conformation, the purified antigen was diluted to a specific protein concentration, and the antigen was coated in a 96-well plate using a coating buffer. After 2 hours, the blocking solution was added overnight, and the primary antibody AM14 and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation. TMB color was developed, and the absorption at 450nm was detected by an enzyme reader. After data processing, it is shown in Figure 6, and DS-Cav1 and SC-TM were used as positive controls. Consistent with the trend of the affinity test results, YD22-1 showed excellent binding ability to the pre-fusion trimer conformation, which was significantly better than SC-TM and other antigens, and at the same time, it was significantly improved compared to YD22, proving that the GRS12 linker peptide has the effect of enhancing the pre-fusion conformation.
实施例4:构象稳定的呼吸道合胞病毒融合前F蛋白的热稳定性评价Example 4: Evaluation of thermal stability of conformationally stabilized respiratory syncytial virus prefusion F protein
(1)使用差式扫描荧光法(DSF)检测各双因素突变抗原的熔点温度以考察热稳定性差异。操作方法简单表述为:将SYPROTM Orange(Thermo,S6650)荧光染料按照1:400加入至待测样品中,使用CFX96Touch荧光定量PCR仪(Bio-Rad)监测荧光信号的变化情况,参数设置为FRET通道,+0.5℃/30s,25℃~90℃,通过设备数据处理软件计算各突变抗原的第一熔解温度Tm1如表8所示。根据差式扫描荧光法原理可知,Tm1值代表了融合前三聚体构象的热稳定性,Tm1值越大三聚体构象越稳定。由此可见,相比于SC-TM(Tm1=60.5℃),本公开中突变抗原的热稳定性皆有所增强,其中YD22-1(Tm1=69.5℃)热稳定性最佳。对比YD03-1和YD03、YD12-1和YD12的Tm1值可以观察到GRS12连接肽突变的加入增强或维持了突变抗原的热稳定性。(1) Differential scanning fluorescence (DSF) was used to detect the melting point temperature of each double-factor mutant antigen to investigate the difference in thermal stability. The operation method is simply described as follows: SYPRO TM Orange (Thermo, S6650) fluorescent dye was added to the sample to be tested at a ratio of 1:400, and the changes in the fluorescence signal were monitored using a CFX96Touch fluorescent quantitative PCR instrument (Bio-Rad). The parameters were set to the FRET channel, +0.5°C/30s, 25°C~90°C, and the first melting temperature Tm 1 of each mutant antigen was calculated by the equipment data processing software as shown in Table 8. According to the principle of differential scanning fluorescence, the Tm 1 value represents the thermal stability of the trimer conformation before fusion, and the larger the Tm 1 value, the more stable the trimer conformation. It can be seen that compared with SC-TM (Tm 1 = 60.5°C), the thermal stability of the mutant antigens in the present disclosure is enhanced, among which YD22-1 (Tm 1 = 69.5°C) has the best thermal stability. By comparing the Tm 1 values of YD03-1 and YD03, and YD12-1 and YD12, it can be observed that the addition of the GRS12 linker peptide mutation enhanced or maintained the thermal stability of the mutant antigen.
表8.突变抗原的熔解温度(Tm1)
Table 8. Melting temperature (Tm 1 ) of mutant antigens
Table 8. Melting temperature (Tm 1 ) of mutant antigens
(2)通过对蛋白样品逐步升温同时监测光散射信号的方法测定突变抗原YD22-1和对照抗原SC-TM的浊点(浊点是指样品在加热条件下开始变浑浊时的温度),调整待测样品浓度为500μg/mL,样品体积500μL,样品每升高5℃测定一次,使用SpectraMax M3多功能酶标仪(Molecular Devices)检测OD350nm处信号,结果如图7所示。测定的YD22-1浊点在85.0℃左右,而SC-TM的浊点在75.0℃左右,YD22-1相比于SC-TM的浊点高出近10.0℃,YD22-1表现出优异的热稳定性。(2) The turbidity points of the mutant antigen YD22-1 and the control antigen SC-TM were determined by gradually increasing the temperature of the protein sample while monitoring the light scattering signal (the turbidity point refers to the temperature at which the sample begins to become turbid under heating conditions). The concentration of the sample to be tested was adjusted to 500 μg/mL, the sample volume was 500 μL, and the sample was measured every time the temperature was increased by 5°C. The signal at OD350nm was detected using a SpectraMax M3 multi-function microplate reader (Molecular Devices). The results are shown in Figure 7. The measured turbidity point of YD22-1 was around 85.0°C, while the turbidity point of SC-TM was around 75.0°C. The turbidity point of YD22-1 was nearly 10.0°C higher than that of SC-TM, and YD22-1 showed excellent thermal stability.
为进一步考察在热胁迫条件下突变抗原YD22-1的融合前构象稳定性,将YD22-1和对照抗原SC-TM调整蛋白浓度至500μg/mL,样品体积100μL,取50μL放置于ProFlexTM PCR仪(Applied Biosystems)中60℃热处理1小时(热处理后),剩余50μL样品置于2~8℃暂存(热处理前)。将热处理前后样品稀释至特定蛋白浓度后,使用包被缓冲液包被抗原至96孔板中,2h后加入封闭液过夜,依次加入一抗(AM14或D25)和二抗Direct-BlotTM HRP anti-human IgG1Fc Antibody孵育后TMB显色,酶标仪检测OD450nm处吸收,热处理前后数值的比值为抗原与单抗的相对结合活性变化,结果如表9所示。由此可见,YD22-1在60℃热处理1小时后仍能保持绝大部分的特异性三聚体抗体结合活性(AM14相对活性0.83),显著优于阳性对照SC-TM(AM14相对活性0.65),说明YD22-1融合前三聚体构象更加稳定。同时,热处理前后YD22-1和SC-TM的融合前构象表位Φ结合活性(D25)均保持不变。To further investigate the pre-fusion conformational stability of mutant antigen YD22-1 under heat stress, the protein concentration of YD22-1 and control antigen SC-TM was adjusted to 500 μg/mL, the sample volume was 100 μL, 50 μL was placed in a ProFlex TM PCR instrument (Applied Biosystems) for heat treatment at 60°C for 1 hour (after heat treatment), and the remaining 50 μL sample was temporarily stored at 2-8°C (before heat treatment). After the samples before and after heat treatment were diluted to a specific protein concentration, the antigen was coated in a 96-well plate using a coating buffer, and a blocking solution was added overnight after 2 hours. The primary antibody (AM14 or D25) and the secondary antibody Direct-Blot TM HRP anti-human IgG1Fc Antibody were added in sequence for incubation and TMB color development was performed. The absorption at OD450nm was detected by a microplate reader. The ratio of the values before and after heat treatment was the relative binding activity change between the antigen and the monoclonal antibody. The results are shown in Table 9. It can be seen that YD22-1 can still maintain most of the specific trimeric antibody binding activity (AM14 relative activity 0.83) after heat treatment at 60℃ for 1 hour, which is significantly better than the positive control SC-TM (AM14 relative activity 0.65), indicating that the pre-fusion trimeric conformation of YD22-1 is more stable. At the same time, the pre-fusion conformation epitope Φ binding activity (D25) of YD22-1 and SC-TM remains unchanged before and after heat treatment.
表9.热处理后(60℃,1小时)突变抗原与单克隆抗体的相对活性变化
*表格内数值格式为:热处理前后相对活性(热处理后OD450数值/热处理前OD450数值)Table 9. Changes in relative activity of mutant antigens and monoclonal antibodies after heat treatment (60°C, 1 hour)
*The format of the values in the table is: relative activity before and after heat treatment (OD450 value after heat treatment/OD450 value before heat treatment)
*表格内数值格式为:热处理前后相对活性(热处理后OD450数值/热处理前OD450数值)Table 9. Changes in relative activity of mutant antigens and monoclonal antibodies after heat treatment (60°C, 1 hour)
*The format of the values in the table is: relative activity before and after heat treatment (OD450 value after heat treatment/OD450 value before heat treatment)
最后应说明的是:以上各实施例仅用以说明本公开的技术方案,而非对其限制;尽管参照前述各实施例对本公开进行了详细的说明,本领域的普通技术人员应当理解:其依然可以对前述各实施例所记载的技术方案进行修改,或者对其中部分或者全部技术特征进行等同替换;而这些修改或者替换,并不使相应技术方案的本质脱离本公开各实施例技术方案的范围。Finally, it should be noted that the above embodiments are only used to illustrate the technical solutions of the present disclosure, rather than to limit them. Although the present disclosure has been described in detail with reference to the aforementioned embodiments, those skilled in the art should understand that they can still modify the technical solutions described in the aforementioned embodiments, or replace some or all of the technical features therein with equivalents. However, these modifications or replacements do not cause the essence of the corresponding technical solutions to deviate from the scope of the technical solutions of the embodiments of the present disclosure.
本公开提供的突变型呼吸道合胞病毒融合前F蛋白,相较于野生型呼吸道合胞病毒融合前F蛋白存在以下突变:(a)F1亚基和/或F2亚基中至少一个氨基酸残基被半胱氨酸取代,(b)野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽部分或全部取代,所述连接肽的氨基酸残基长度至少2个。本公开中所述一种突变型呼吸道合胞病毒融合前F蛋白相比于同类品具有优异的中和抗体结合活性和热稳定性,适宜于开发成为呼吸道合胞病毒疫苗的组分之一,具备优异的工业实用性。
The mutant respiratory syncytial virus prefusion F protein provided in the present disclosure has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein: (a) at least one amino acid residue in the F1 subunit and/or the F2 subunit is replaced by cysteine, (b) the amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, and the amino acid residue length of the connecting peptide is at least 2. A mutant respiratory syncytial virus prefusion F protein described in the present disclosure has excellent neutralizing antibody binding activity and thermal stability compared to similar products, is suitable for development as one of the components of a respiratory syncytial virus vaccine, and has excellent industrial applicability.
Claims (15)
- 突变型呼吸道合胞病毒融合前F蛋白,其特征在于,所述突变型呼吸道合胞病毒融合前F蛋白相较于野生型呼吸道合胞病毒融合前F蛋白存在以下突变:A mutant respiratory syncytial virus prefusion F protein, characterized in that the mutant respiratory syncytial virus prefusion F protein has the following mutations compared to the wild-type respiratory syncytial virus prefusion F protein:(a)F1亚基和/或F2亚基中至少一个氨基酸残基被半胱氨酸取代,并且该取代使得呼吸道合胞病毒融合前F蛋白F1亚基与F2亚基间存在非天然二硫键连接,所述非天然二硫键包括F1亚基与F2亚基之间形成的除Cys69-Cys212和Cys37-Cys439之外的二硫键;(a) at least one amino acid residue in the F1 subunit and/or the F2 subunit is substituted by cysteine, and the substitution results in a non-native disulfide bond between the F1 subunit and the F2 subunit of the respiratory syncytial virus prefusion F protein, wherein the non-native disulfide bond includes a disulfide bond other than Cys69-Cys212 and Cys37-Cys439 formed between the F1 subunit and the F2 subunit;(b)野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽部分或全部取代,所述连接肽的氨基酸残基长度至少2个;(b) amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are partially or completely replaced by a connecting peptide, wherein the amino acid residue length of the connecting peptide is at least 2;所述野生型呼吸道合胞病毒融合前F蛋白的氨基酸序列如SEQ ID No.01所示。The amino acid sequence of the wild-type respiratory syncytial virus pre-fusion F protein is shown in SEQ ID No.01.
- 根据权利要求1所述的突变型呼吸道合胞病毒融合前F蛋白,其特征在于,所述半胱氨酸取代包括S55C、T189C、P101C或V152C中至少一种。The mutant respiratory syncytial virus prefusion F protein according to claim 1, characterized in that the cysteine substitution comprises at least one of S55C, T189C, P101C or V152C.
- 根据权利要求2所述的突变型呼吸道合胞病毒融合前F蛋白,其特征在于,所述半胱氨酸取代包括S55C和T189C,和/或,P101C和V152C。The mutant respiratory syncytial virus prefusion F protein according to claim 2, characterized in that the cysteine substitutions include S55C and T189C, and/or, P101C and V152C.
- 根据权利要求1~3任一项所述的突变型呼吸道合胞病毒融合前F蛋白,其特征在于,野生型呼吸道合胞病毒融合前F蛋白第104~137位氨基酸残基被连接肽全部取代。The mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 3, characterized in that amino acid residues 104 to 137 of the wild-type respiratory syncytial virus prefusion F protein are all replaced by a connecting peptide.
- 根据权利要求4所述的突变型呼吸道合胞病毒融合前F蛋白,其特征在于,所述连接肽的氨基酸序列为GSGSGGSGSGRS。The mutant respiratory syncytial virus prefusion F protein according to claim 4, characterized in that the amino acid sequence of the connecting peptide is GSGSGGSGSGRS.
- 根据权利要求1~3任一项所述的突变型呼吸道合胞病毒融合前F蛋白,其特征在于,野生型呼吸道合胞病毒融合前F蛋白第104~144位氨基酸残基被连接肽全部取代,所述连接肽的氨基酸序列为GSGSGRS或GS。The mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 3, characterized in that amino acid residues 104 to 144 of the wild-type respiratory syncytial virus prefusion F protein are all replaced by a connecting peptide, and the amino acid sequence of the connecting peptide is GSGSGRS or GS.
- 生物材料,其特征在于,所述生物材料包括以下(a)~(d)中任一项:The biomaterial is characterized in that the biomaterial comprises any one of the following (a) to (d):(a)编码权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白的核酸分子;(a) a nucleic acid molecule encoding the mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6;(b)含有(a)所述核酸分子的重组载体,优选地,所述重组载体的原始质粒为pEE12.4;(b) a recombinant vector containing the nucleic acid molecule described in (a), preferably, the original plasmid of the recombinant vector is pEE12.4;(c)含有(a)所述核酸分子或(b)所述重组载体的转化细胞,优选地,所述转化细胞的宿主细胞选自哺乳动物细胞、细菌、酵母、真菌或昆虫细胞;(c) a transformed cell containing the nucleic acid molecule (a) or the recombinant vector (b), preferably, the host cell of the transformed cell is selected from mammalian cells, bacteria, yeast, fungi or insect cells;进一步优选地,所述哺乳动物细胞选自中国仓鼠卵巢细胞、肿瘤细胞、BHK细胞或HEK293细胞;Further preferably, the mammalian cell is selected from Chinese hamster ovary cells, tumor cells, BHK cells or HEK293 cells;(d)含有(a)所述核酸分子或(b)所述重组载体的重组病毒,优选地,所述重组病毒包括腺病毒、腺相关病毒、牛痘病毒、疱疹病毒或逆转录病毒载体。(d) a recombinant virus containing the nucleic acid molecule described in (a) or the recombinant vector described in (b), preferably, the recombinant virus comprises an adenovirus, an adeno-associated virus, a vaccinia virus, a herpes virus or a retroviral vector.
- 权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白的制备方法,其特征在于,培养权利要求7中所述的转化细胞或重组病毒,并诱导表达获得突变型呼吸道合胞病毒融合前F蛋白。The method for preparing the mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6 is characterized in that the transformed cells or recombinant viruses described in claim 7 are cultured and induced to express to obtain the mutant respiratory syncytial virus prefusion F protein.
- 权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白或权利要求7所述生物材料在以下(a)~(c)中任一项的应用:Use of the mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6 or the biomaterial according to claim 7 in any one of the following (a) to (c):(a)制备呼吸道合胞病毒特异性抗体中的应用;(a) Application in the preparation of respiratory syncytial virus-specific antibodies;(b)制备用于预防和/或治疗呼吸道合胞病毒感染的药物,优选地,所述药物包括重组蛋白疫苗、载体类疫苗或核酸疫苗;(b) preparing a medicament for preventing and/or treating respiratory syncytial virus infection, preferably, the medicament comprises a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine;(c)制备呼吸道合胞病毒诊断试剂,可选地,所述诊断试剂用于诊断呼吸道合胞病毒感染。(c) preparing a diagnostic reagent for respiratory syncytial virus, optionally, the diagnostic reagent is used for diagnosing respiratory syncytial virus infection.
- 预防和/或治疗呼吸道合胞病毒感染的药物,其特征在于,包含权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白,权利要求7所述生物材料,或权利要求9中(a)所述的呼吸道合胞病毒特异性抗体;A drug for preventing and/or treating respiratory syncytial virus infection, characterized in that it comprises the mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6, the biological material according to claim 7, or the respiratory syncytial virus-specific antibody according to claim 9 (a);可选地,所述药物包括重组蛋白疫苗、载体类疫苗或核酸疫苗。Optionally, the drug includes a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- 呼吸道合胞病毒诊断试剂,其特征在于,包含权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白,或权利要求9中(a)所述的呼吸道合胞病毒特异性抗体。A respiratory syncytial virus diagnostic reagent, characterized in that it contains the mutant respiratory syncytial virus pre-fusion F protein as described in any one of claims 1 to 6, or the respiratory syncytial virus-specific antibody as described in claim 9 (a).
- 用于预防和/或治疗呼吸道合胞病毒感染的方法,所述方法包括给予有需要的患者治疗有效量的权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白,权利要求7所述生物材料,或权利要求9中(a)所述的呼吸道合胞病毒特异性抗体;A method for preventing and/or treating respiratory syncytial virus infection, the method comprising administering to a patient in need thereof a therapeutically effective amount of the mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6, the biological material according to claim 7, or the respiratory syncytial virus-specific antibody according to claim 9 (a);可选地,所述突变型呼吸道合胞病毒融合前F蛋白、生物材料或呼吸道合胞病毒特异性抗体以重组蛋白疫苗、载体类疫苗或核酸疫苗的形式给予。Optionally, the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- 用于诊断呼吸道合胞病毒感染的方法,所述方法包括使用权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白,或权利要求9中(a)所述的呼吸道合胞病毒特异性抗体的步骤。 A method for diagnosing respiratory syncytial virus infection, the method comprising the step of using the mutant respiratory syncytial virus prefusion F protein as described in any one of claims 1 to 6, or the respiratory syncytial virus-specific antibody as described in claim 9 (a).
- 权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白,权利要求7所述生物材料,或权利要求9中(a)所述的呼吸道合胞病毒特异性抗体,用于预防和/或治疗呼吸道合胞病毒感染;The mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6, the biological material according to claim 7, or the respiratory syncytial virus-specific antibody according to claim 9 (a), for preventing and/or treating respiratory syncytial virus infection;可选地,所述突变型呼吸道合胞病毒融合前F蛋白、生物材料或呼吸道合胞病毒特异性抗体以重组蛋白疫苗、载体类疫苗或核酸疫苗的形式给予。Optionally, the mutant respiratory syncytial virus pre-fusion F protein, biological material or respiratory syncytial virus-specific antibody is administered in the form of a recombinant protein vaccine, a vector vaccine or a nucleic acid vaccine.
- 权利要求1~6任一项所述突变型呼吸道合胞病毒融合前F蛋白,或权利要求9中(a)所述的呼吸道合胞病毒特异性抗体,用于诊断呼吸道合胞病毒感染。 The mutant respiratory syncytial virus prefusion F protein according to any one of claims 1 to 6, or the respiratory syncytial virus-specific antibody according to claim 9 (a), is used for diagnosing respiratory syncytial virus infection.
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