WO2023101447A1 - Biomarker for diagnosis of pancreatitis in companion dog - Google Patents

Biomarker for diagnosis of pancreatitis in companion dog Download PDF

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WO2023101447A1
WO2023101447A1 PCT/KR2022/019278 KR2022019278W WO2023101447A1 WO 2023101447 A1 WO2023101447 A1 WO 2023101447A1 KR 2022019278 W KR2022019278 W KR 2022019278W WO 2023101447 A1 WO2023101447 A1 WO 2023101447A1
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pancreatitis
protein
level
mrna
group
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PCT/KR2022/019278
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French (fr)
Korean (ko)
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김경곤
김민정
염정훈
안희성
유지영
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재단법인 아산사회복지재단
울산대학교 산학협력단
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Priority claimed from KR1020220164050A external-priority patent/KR20230082583A/en
Publication of WO2023101447A1 publication Critical patent/WO2023101447A1/en

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    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N30/00Investigating or analysing materials by separation into components using adsorption, absorption or similar phenomena or using ion-exchange, e.g. chromatography or field flow fractionation
    • G01N30/02Column chromatography
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids

Definitions

  • the present invention relates to a biomarker for diagnosing canine pancreatitis and a method for diagnosing canine pancreatitis using the same.
  • Pancreatitis is a disease in which pancreatic secretory glands are destroyed by pancreatic enzymes or the like, or inflammation occurs locally or entirely in the pancreas.
  • Pancreatitis is a disease commonly observed in humans as well as other animals including dogs.
  • Pancreatitis is divided into acute and chronic pancreatitis.
  • Acute pancreatitis occurs when the exocrine function of the pancreas is impaired, digestive enzymes are activated, and this attacks the pancreas and surrounding tissues, causing severe inflammation.
  • Dogs suffering from acute pancreatitis cause vomiting, diarrhea, abdominal pain, etc., and severe symptoms such as bloody stool can lead to a poor prognosis, but if detected early and actively treated, the survival rate can be increased.
  • Chronic pancreatitis is characterized by impairment of both exocrine and endocrine functions due to chronic inflammation. It is accompanied by mild vomiting and diarrhea, and the condition may improve or worsen repeatedly. Canine pancreatitis has a mortality rate of about 40%, which is very high, and can cause complications such as diabetes, so timely treatment is very important.
  • the present invention was made to solve the above problems, and was completed by discovering a biomarker capable of diagnosing pancreatitis in dogs with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins.
  • an object of the present invention is to provide a composition for diagnosing canine pancreatitis, which contains, as an active ingredient, an agent for measuring protein or mRNA levels of the biomarkers.
  • Another object of the present invention is to provide a kit for diagnosing canine pancreatitis, including an agent for measuring protein or mRNA levels of the biomarkers.
  • Another object of the present invention relates to a method for diagnosing canine pancreatitis by measuring protein or mRNA levels of the biomarkers.
  • the present invention relates to a dog product comprising, as an active ingredient, an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG (Fibrinogen gamma chain).
  • PDE4DIP phosphodiesterase 4D interacting protein
  • SERPINA3 Serotonin-1
  • FGG Fibrinogen gamma chain
  • the protein or mRNA level of SERPINA3 may be increased in pancreatitis subjects compared to normal subjects, but is not limited thereto.
  • the protein or mRNA level of the PDE4DIP or FGG may be reduced in pancreatitis subjects compared to normal subjects, but is not limited thereto.
  • the composition comprises Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B) , Complement C3 (LOC484960), and may further include an agent for measuring the level of at least one protein or mRNA selected from the group consisting of Complement factor I, but is not limited thereto.
  • the agent for measuring the protein level may be an antibody or an aptamer specific to the protein, but is not limited thereto.
  • the agent for measuring the mRNA expression level may be a primer set or a probe that specifically binds to the mRNA, but is not limited thereto.
  • the protein or mRNA level may be at least one level selected from the group consisting of blood, whole blood, plasma, serum, and lymph, but is not limited thereto.
  • the present invention provides a kit for diagnosing canine pancreatitis, comprising the agent or composition according to the present invention.
  • the present invention provides a method for diagnosing canine pancreatitis, comprising the following steps:
  • S1 measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject; and
  • step (S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; Diagnosing pancreatitis or determining that there is a risk of developing pancreatitis when the protein or mRNA level of PDE4DIP or FGG is reduced compared to the control group.
  • the method comprises Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, A step of measuring the level of at least one protein or mRNA selected from the group consisting of Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), and Complement factor I may be further included, but is not limited thereto.
  • the biological sample may be at least one selected from the group consisting of blood, whole blood, plasma, serum, and lymph, but is not limited thereto.
  • the protein level is measured by protein chip analysis, immunoassay, ligand binding assay, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) assay, radioimmunoassay, radioimmunodiffusion method, Oukteroni immunodiffusion method, rocket immunoelectrophoresis, tissue immunostaining, complement fixation assay, two-dimensional electrophoretic assay, liquid chromatography-mass At least one method selected from the group consisting of liquid chromatography-mass spectrometry (LC-MS), liquid chromatography-mass spectrometry/ mass spectrometry (LC-MS/MS), western blotting, enzyme linked immunosorbentassay (ELISA), and FACS It may be measured as, but is not limited thereto.
  • MALDI-TOF Microx Assisted Laser Desorption/Ionization Time
  • the mRNA level is measured from the group consisting of PCR, RNase protection assay, northern blotting, southern blotting, in situ hybridization, DNA chip, and RNA chip. It may be measured by one or more selected methods, but is not limited thereto.
  • the present invention is an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG, for preparing an agent or kit for diagnosing canine pancreatitis.
  • PDE4DIP phosphodiesterase 4D interacting protein
  • SERPINA3 Sepin family A member 3
  • FGG FGG
  • the present invention provides the use of an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG for the diagnosis of canine pancreatitis. .
  • the present invention relates to a composition for diagnosing canine pancreatitis, and was completed by discovering a biomarker capable of diagnosing pancreatitis with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins.
  • the present inventors performed proteomic analysis using high-resolution mass spectrometry on plasma proteins of dogs suffering from pancreatitis, and selected biomarkers showing significant expression differences compared to normal controls. It was confirmed that the pancreatitis diagnostic model established using the selected biomarker can diagnose pancreatitis with high specificity, sensitivity, and accuracy.
  • the present invention is a non-invasive method using a small amount of blood, which enables prediction and early diagnosis of the risk of pancreatitis in dogs, thereby preserving the health of dogs, reducing the burden of guardians' medical expenses, and contributing to the improvement of the quality of veterinary consulting. It is expected that
  • 1a is a diagram illustrating the principle of removing the top 14 abundant plasma proteins using a MARS14 column.
  • Figure 1b shows the result of pre-processing the top 14 abundant plasma proteins and trace proteins and confirming the UV spectrum.
  • Figure 1c is a flow chart showing the process of preparing plasma proteins into peptides by the suspension trap method.
  • 1d is a diagram showing parameters used in SWATCH LC-MS analysis.
  • 3 is a graph showing the number of proteins quantified in canine plasma samples.
  • Figure 4 is a Volcano plot showing increased or decreased proteins in pancreatitis subjects compared to normal controls.
  • 5 is a table showing information on 16 proteins increased or decreased in pancreatitis subjects compared to normal controls.
  • FIG. 6a and 6b are diagrams showing box plots and ROC curves of SERPINA3 (FIG. 6a) and Angiotensinogen (FIG. 6b), which are proteins increased in pancreatitis subjects compared to normal controls.
  • 8 is a result of screening 23 proteins showing differential expression levels in a normal control group, a chronic pancreatitis group, and an acute pancreatitis group using the Kruskal Wallis test.
  • FIG. 9 is a box plot comparing the expression levels of Angiotensinogen, SERPINA3, and PDE4DIP in a normal control group, a chronic pancreatitis group, and an acute pancreatitis group (from the left, in order, expression in the acute pancreatitis group, chronic pancreatitis group, and normal group). represents).
  • the present invention relates to a composition for diagnosing canine pancreatitis, and was completed by discovering a biomarker capable of diagnosing pancreatitis in dogs with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins. Specifically, the present inventors performed quantitative and qualitative analysis on plasma proteins of normal and diseased dogs through high-resolution mass spectrometry, and through this, biomarkers showing significant differences between individuals were selected. In addition, it was confirmed that the diagnostic model established by combining the above biomarkers can distinguish between diseased individuals and normal individuals with high specificity, sensitivity, and accuracy.
  • the diagnosis method according to the present invention is an alternative to conventional invasive diagnosis and examination methods, and has the advantage of being able to diagnose diseases through a relatively simple and economical method of blood sampling.
  • the main object of the present invention is to provide an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG as an active ingredient, It is to provide a composition for diagnosing pancreatitis in an individual.
  • PDE4DIP phosphodiesterase 4D interacting protein
  • SERPINA3 Sepin family A member 3
  • FGG FGG
  • subject means a subject requiring risk prediction, diagnosis, prognosis prediction, or treatment of a disease, and more specifically, non-human primates, mice, rats, dogs , It may mean mammals such as cats, horses, and cows, but preferably means dogs (dogs; scientific name, Canis lupus familiaris).
  • pancreatitis is a disease in which pancreatic secretory glands are destroyed by pancreatic enzymes or the like, or inflammation occurs locally or entirely in the pancreas.
  • Pancreatitis according to the present invention includes both acute pancreatitis and chronic pancreatitis.
  • Acute pancreatitis occurs when the exocrine function of the pancreas is impaired, digestive enzymes are activated, and this attacks the pancreas and surrounding tissues, causing severe inflammation.
  • Dogs suffering from acute pancreatitis cause vomiting, diarrhea, abdominal pain, and severe symptoms such as bloody stools.
  • the prognosis may be poor, but early detection and active treatment can increase the survival rate, so early diagnosis is more important than anything else. do.
  • pancreatitis is characterized by impairment of both exocrine and endocrine functions due to chronic inflammation. It is accompanied by mild vomiting and diarrhea, and the condition may improve or worsen repeatedly. Since pancreatitis has no clearly identified cause, it is important to screen for the risk of developing it or diagnose it early.
  • diagnosis means confirming the presence or characteristics of a pathological state, and confirming the presence or absence of pancreatitis, whether pancreatitis has occurred, the possibility of developing pancreatitis (risk of occurrence), the prognosis of pancreatitis, etc. It can mean including.
  • diagnosis refers to determining the susceptibility of a subject to a specific disease or disorder, and determining whether a subject currently has a specific disease or disorder. , determining the prognosis of a subject suffering from a particular disease or condition (e.g., identifying tumor status, determining the staging of a tumor, or determining the responsiveness of a cancer to treatment), or therametrics (e.g., treatment monitoring the state of the object to provide information about efficacy).
  • a particular disease or condition e.g., identifying tumor status, determining the staging of a tumor, or determining the responsiveness of a cancer to treatment
  • therametrics e.g., treatment monitoring the state of the object to provide information about efficacy
  • PDE4DIP phosphodiesterase 4D interacting protein
  • PDE4DIP phosphodiesterase 4D interacting protein
  • abnormal PDE4DIP induces myeloproliferative disorders associated with eosinophilia and the like, and is known to be associated with adult pineoblastoma and adult pineal parenchymal tumor.
  • canine pancreatitis and PDE4DIP there have been no reports of canine pancreatitis and PDE4DIP to date.
  • the present inventors confirmed that the level of PDE4DIP was significantly reduced in the pancreatitis group compared to the normal group through the canine plasma proteomic analysis.
  • Specific information on PDE4DIP can be found in public databases such as Uniprot (Uniprot registration number, A0A8C0SUT4).
  • SERPINA3 (Serpin family A member 3) is a member of the serpin family, a protein group that inhibits serine proteases. Polymorphisms in SERPINA3 appear tissue-specific and may affect protease targeting. In humans, SERPINA3 abnormalities have been reported to cause Alzheimer's disease, liver disease, Parkinson's disease, etc., but the correlation between SERPINA3 expression level and pancreatitis in dogs has not been known to date. The present inventors confirmed that it was increased in the pancreatitis group compared to the normal group through the dog plasma proteomic analysis. Specific information on SERPINA3 can be found at Uniprot, etc. (Uniprot registration number: A0A8I3MJD4).
  • FGG Fibrinogen gamma chain or fibrinogen gamma gene
  • FGA Fibrinogen alpha
  • FGB Fibrinogen beta
  • FGG is one of the major components of blood clots and plays an important role in hemostasis. It functions in the early stages of wound repair to stabilize the lesion and regulate cell migration during re-epithelialization. The present inventors confirmed that it was reduced in the pancreatitis group compared to the normal group through the dog plasma proteomic analysis. Specific information on FGG can be found in Uniprot, etc. (Uniprot registration number: P12800).
  • the composition is Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), It may further include an agent for measuring the level of at least one protein or mRNA selected from the group consisting of Complement C3 (LOC484960) and Complement factor I.
  • the above proteins (genes) are markers confirmed to be statistically significantly increased or decreased in dogs suffering from pancreatitis compared to normal individuals.
  • Pentaxin is a protein also referred to as "Pentraxin”, which includes a Pentraxin protein domain and is known to be involved in an acute immunological response.
  • Pentaxin is produced by tissue cells, macrophages, monocytes, and dendritic cells at the site of infection or inflammation, and plays a role in suppressing infections such as fungi, bacteria, and viruses.
  • canine pancreatitis and Pentaxin nothing is known about the relationship between canine pancreatitis and Pentaxin, but the present inventors confirmed that the level of Pentaxin was significantly increased in pancreatitis subjects compared to normal subjects through canine plasma protein analysis.
  • Specific information on Pentaxin can be found in public databases such as Uniprot (Uniprot registration number: A0A8C0T016).
  • Angiotensinogen is a component of the renin-angiotensin system (RAS), a hormone system that regulates blood pressure and body fluid balance.
  • RAS renin-angiotensin system
  • Angiotensinogen is also known as a renin substrate and is a non-inhibitory member of the serpin family.
  • the present inventors confirmed that the level of angiotensinogen was significantly increased in pancreatitis subjects compared to normal subjects through canine plasma proteomic analysis.
  • Specific information on angiotensinogen can be found in public databases such as Uniprot (Uniprot registration number: A0A8C0PY30).
  • the Pentaxin, SERPINA3, and Angiotensinogen may be increased in subjects suffering from pancreatitis compared to normal controls.
  • Peptidase D Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), Complement factor I, or PDE4DIP It may be characterized as being reduced in individuals suffering from pancreatitis compared to normal controls.
  • the level is increased means that the undetected is detected, or the detected amount is relatively higher than the normal level.
  • a level “increased” means that the level in the experimental group is at least 1%, 2%, 3%, 4%, 5%, 10% or more, such as 5%, compared to that in the control group. , 10%, 20%, 30%, 40%, or 50%, 60%, 70%, 80%, 90% or higher, and/or 0.5x, 1.1x, 1.2x, 1.4x, 1.6x , 1.8 times higher or higher.
  • 5.5 times, 5.5 to 6 times, 6 to 6.5 times, 6.5 to 7 times, 7 to 7.5 times, 7.5 to 8 times, 8 to 8.5 times, 8.5 to 9 times, 9 to 9.5 times, 9.5 to 10 times, or 10 times It may mean an increase of more than double, but is not limited thereto.
  • the meaning of the opposite term can be understood as having the opposite meaning according to the above definition by those skilled in the art.
  • the term "measurement” refers to measuring and confirming the presence (expression) of a substance of interest (mRNA or protein of a pancreatitis biomarker gene in the case of the present invention), or the presence level (expression of a substance of interest) level) is meant to include both measuring and confirming changes. That is, measuring the expression level of the protein means measuring whether or not it is expressed (that is, measuring whether or not it is expressed) or measuring the level of qualitative or quantitative change of the protein. The measurement can be performed without limitation including both qualitative methods (assays) and quantitative methods. Types of qualitative and quantitative methods for measuring protein levels are well known in the art, and include the experimental methods described herein. Specific protein level comparison methods for each method are well known in the art. Therefore, detecting the target protein means detecting the presence or absence of the collagen protein, or confirming an increase (up-regulation) or decrease (down-regulation) of the protein level.
  • analysis may preferably mean “measurement”, and the qualitative analysis may mean measuring and confirming the presence or absence of a target substance, and the quantitative analysis may mean It may mean measuring and confirming changes in the presence level (expression level) or amount of the desired substance.
  • analysis or measurement may be performed without limitation including both qualitative and quantitative methods, and preferably, quantitative measurement may be performed.
  • the agent for measuring the level of mRNA may be a primer set or a probe that specifically binds to mRNA.
  • the composition of the present invention including the mRNA-specific primer set or probe of the biomarker genes according to the present invention may further include an agent required for a known RNA detection method.
  • the mRNA level of the biomarkers can be measured in a subject by using a known method for detecting RNA using the composition of the present invention without limitation.
  • the "primer” is a fragment that recognizes a target gene sequence, and includes a forward and reverse primer pair, preferably a primer pair that provides an analysis result having specificity and sensitivity. High specificity can be imparted when the nucleic acid sequence of the primer is a sequence that is inconsistent with the non-target sequence present in the sample, so that the primer amplifies only the target gene sequence containing a complementary primer binding site and does not cause non-specific amplification. .
  • the "probe” means a substance that can specifically bind to a target substance to be detected in a sample, and means a substance that can specifically confirm the presence of a target substance in a sample through the binding.
  • the type of probe is not limited as a material commonly used in the art, but preferably may be peptide nucleic acid (PNA), locked nucleic acid (LNA), peptide, polypeptide, protein, RNA or DNA, and most preferably Most likely it is PNA.
  • the probe is a biomaterial, including one derived from or similar to a living organism or manufactured in vitro, for example, enzymes, proteins, antibodies, microorganisms, animal and plant cells and organs, nerve cells, DNA, and It may be RNA, DNA includes cDNA, genomic DNA, and oligonucleotides, RNA includes genomic RNA, mRNA, and oligonucleotides, and examples of proteins may include antibodies, antigens, enzymes, peptides, and the like.
  • primer, probe, or antisense nucleotide that specifically binds to the gene encoding the protein based on this information (amino acid sequence, nucleic acid sequence, etc.) can be easily designed.
  • Primers or probes may be chemically synthesized using a phosphoramidite solid support synthesis method or other well-known methods, and include all functional equivalents.
  • primers or probes may be variously modified according to methods known in the art to the extent that hybridization with mRNA is not hindered.
  • modifications are methylation, capping, substitution of one or more homologs of the natural nucleotide, and modifications between nucleotides, such as uncharged linkages such as methyl phosphonates, phosphotriesters, phosphoroamidates, carbamates, etc. ) or charged linkages (eg, phosphorothioate, phosphorodithioate, etc.), and binding of fluorescent or enzymatic labeling materials.
  • the agent for measuring the level of the protein may be an antibody or an aptamer specific to the protein.
  • an antibody refers to a specific protein molecule directed against an antigenic site.
  • an antibody means an antibody that specifically binds to a marker protein, and includes both polyclonal antibodies, monoclonal antibodies and recombinant antibodies.
  • a part of the entire antibody is also included in the antibody of the present invention, and all types of immunoglobulin antibodies that specifically bind to the protein of the present invention are included.
  • antibodies of the present invention include special antibodies such as humanized antibodies and chimeric antibodies and recombinant antibodies as long as they can specifically bind to the protein of the present invention.
  • the term "aptamer” refers to a substance capable of specifically binding to an analyte to be detected in a sample, and a single-stranded nucleic acid (DNA, RNA, or modified nucleic acid) having a stable tertiary structure in itself. nucleic acid), it is possible to specifically confirm the presence of a target protein in a sample.
  • the aptamer is synthesized by determining the sequence of an oligonucleotide that is selective and highly binding to the target protein to be identified according to the general aptamer preparation method, and then the 5' or 3' end of the oligonucleotide is applied. It may be made by modification with -SH, -COOH, -OH or NH 2 so that it can bind to the functional group of the timer chip, but is not limited thereto.
  • composition of the present invention may additionally include an agent required for the method of detecting the biomarker protein, and the subject (or biological obtained from the subject) may be used without limitation by using a known protein detection method using the present composition.
  • the expression level of the protein in the sample) can be measured.
  • the composition according to the present invention can be used for analysis of a biological sample isolated from a subject in need of diagnosis.
  • the "biological sample” may be included without limitation as long as it is collected from a subject to diagnose pancreatitis or predict the risk of developing it.
  • the biological sample may be selected from liquid, whole blood, plasma, urine, saliva, tissue, cell, organ, bone marrow, fine needle aspiration specimen, core needle biopsy specimen, and vacuum aspiration biopsy specimen.
  • the composition according to the present invention is for non-invasive diagnosis, and the biological sample may be at least one selected from the group consisting of blood, whole blood, plasma, serum, and lymph.
  • the biological sample may be pretreated before being used for detection or diagnosis.
  • it may include homogenization, filtration, distillation, extraction, concentration, inactivation of interfering components, addition of reagents, and the like.
  • the sample may be prepared to increase the detection sensitivity of a protein marker, for example, a sample obtained from a subject may be subjected to anion exchange chromatography, affinity chromatography, size exclusion chromatography, liquid chromatography , it may be pretreated using methods such as sequential extraction or gel electrophoresis.
  • the present invention can provide a kit for diagnosing canine pancreatitis, comprising the composition according to the present invention.
  • kit refers to a device or set for diagnosis that can diagnose pancreatitis by measuring the amount of mRNA or protein of the biomarkers according to the present invention, which are included in a sample.
  • the kit may be an RT-PCR kit, a DNA chip kit, an ELISA kit, a protein chip kit, a Rapid kit, a mass spectrometry kit, a microarray kit, or a multiple reaction monitoring (MRM) kit, but is limited thereto.
  • the kit of the present invention may include an antibody recognizing a target protein as a marker, a primer set recognizing mRNA as a marker, or a probe, as well as one or more other component compositions, solutions, or devices suitable for an analysis method.
  • the substance for detecting the expression level of the gene, mRNA, or protein can be acted on one or more times without limitation, there is no limitation before and after applying each substance, and the application of each substance may be performed simultaneously or microscopically. may proceed to
  • kit according to the present invention may further include instructions describing the diagnostic method and the like according to the present invention.
  • Another object of the present invention is to provide a method for diagnosing pancreatitis in an individual or a method for providing information for diagnosing pancreatitis in a dog, including the following steps:
  • S1 measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject; and
  • step (S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; If the protein or mRNA level of PDE4DIP or FGG is reduced compared to the control group, diagnosing pancreatitis or judging that there is a risk (high probability of developing) pancreatitis.
  • the method comprises Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, A step of measuring the level of at least one protein or mRNA selected from the group consisting of Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), and Complement factor I may be further included, but is not limited thereto.
  • pancreatitis is diagnosed or pancreatitis is diagnosed as having a risk (high probability of developing) Further steps may be included.
  • the method Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960) of the subject , Complement factor I, and / or the level of PDE4DIP is reduced compared to the control group, the step of diagnosing pancreatitis or determining that there is a risk of developing pancreatitis (high probability of developing) may be further included.
  • the area under curve when analyzing receiver operating characteristics, may be 0.7 or more, 0.75 or more, 0.8 or more, 0.85 or more, 0.9 or more, 0.93 or more, 0.95 or more, 0.96 or more, 0.97 or more, 0.98 or more, or 0.99 or more.
  • the diagnostic method according to the present invention has a specificity and / or sensitivity of 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 93% or more, 95% or more, 96% or more, 97% or more or more, 98% or more, or 99% or more.
  • the diagnostic method according to the present invention includes the step of measuring the protein or mRNA level of SERPINA3, the diagnostic specificity may be 70% or more or 75% or more, and the diagnostic sensitivity is 70% or more, 75% or more, Or it may be 80% or more, and the ROC AUC may be 0.75 or more, 0.8 or more, or 0.85 or more, but is not limited thereto.
  • the diagnostic method according to the present invention includes the step of measuring the protein or mRNA level of the angiotensinogen
  • the diagnostic specificity may be 75% or more, 80% or more, or 85% or more
  • the diagnostic sensitivity may be 70% or more or 75% or more.
  • % or more and the ROC AUC may be 0.75 or more or 0.8 or more, but is not limited thereto.
  • the diagnostic accuracy can be further increased.
  • the diagnostic method according to the present invention includes the step of measuring the protein or mRNA levels of PDE4DIP, FGG, and SERPINA3, the diagnostic sensitivity is 80% or more, 85% or more, 90% or more, 93% or more, or 95% or greater, diagnostic specificity may be 0.7 or greater, 0.75 or greater, or 0.8 or greater, and ROC AUC may be 80% or greater, 85% or greater, 90% or greater, 93% or greater, or 95% or greater. It is not going to be
  • the diagnostic method according to the present invention can be used to determine the type (chronic or acute) of pancreatitis in a subject diagnosed with pancreatitis.
  • the diagnostic method according to the present invention includes measuring the mRNA or protein level of SERPINA3, and at this time, if the mRNA or protein level of SERPINA3 in the subject is increased compared to the control group, the subject has acute pancreatitis can be diagnosed as
  • the control group may be a normal individual or an individual suffering from chronic pancreatitis.
  • the diagnostic method according to the present invention includes the step of measuring the protein or mRNA level of PDE4DIP, and at this time, if the protein or mRNA level of PDE4DIP in the subject is reduced compared to the control group, the subject is diagnosed with acute pancreatitis.
  • the control group may be a normal individual or an individual suffering from chronic pancreatitis.
  • the term "method for providing information” refers to a method for providing information on diagnosis of a disease by analyzing a biological sample of a subject or increasing or decreasing the level of biomarkers according to the present invention. It refers to a method of obtaining information on the onset or onset (risk) of a disease by checking For example, a method for measuring the level of a biomarker according to the present invention and comparing it with a control group to provide information on whether an individual is likely to develop pancreatitis, has a relatively high likelihood of developing pancreatitis, or has already developed pancreatitis As a result, the risk of developing pancreatitis, that is, the high-risk group, can also be predicted through the method, and it can also be used as a method of providing information on the prevention and treatment of pancreatitis.
  • a "control" may be a biological sample isolated from a normal subject or a subject suffering from pancreatitis.
  • the method for measuring the protein level is not particularly limited as long as it is by a protein measuring method known in the art, but protein chip analysis, immunoassay, ligand binding assay, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, radioimmunoassay, radioimmunodiffusion method, Oukteroni immunodiffusion method, rocket immunoelectrophoresis, tissue immunostaining, Complement fixation method, two-dimensional electrophoretic analysis, liquid chromatography-Mass Spectrometry (LC-MS), LC-MS/MS (liquid chromatography-Mass Spectrometry/ Mass Spectrometry), Western blotting, ELISA ( enzyme linked immunosorbent assay), and FACS.
  • MALDI-TOF Microx Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry
  • the method for measuring the mRNA level is not particularly limited as long as it is by a method for measuring mRNA known in the art, but PCR, RNase protection assay, Northern blotting, Southern blotting, It can be measured by methods such as in situ hybridization, DNA chip, and/or RNA chip.
  • the present invention may provide a device for diagnosing pancreatitis in an individual (eg, dog).
  • the measuring unit of the diagnostic device of the present invention measures the expression level of at least one protein selected from the group consisting of a biomarker according to the present invention, for example, PDE4DIP, SERPINA3, and FGG, or a gene encoding the same, with respect to a biological sample obtained from a subject of interest.
  • the expression level of a protein or gene can be measured using a measurement agent.
  • Pancreatitis can be diagnosed or diagnosed as having a high risk of developing pancreatitis by checking the expression level of the protein or gene using the preparation in the measuring unit.
  • the diagnostic device of the present invention may further include a detection unit that predicts and outputs the presence, stage, or type of pancreatitis of an individual based on the expression level of the protein or gene obtained from the measurement unit.
  • the detection unit can diagnose pancreatitis by generating and classifying information on pancreatitis according to the category of the expression level of the protein or gene obtained by the measurement unit.
  • the present invention provides a method for preventing or treating pancreatitis in dogs, comprising the following steps:
  • S1 measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject;
  • PDE4DIP phosphodiesterase 4D interacting protein
  • SERPINA3 Serpin family A member 3
  • step (S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; diagnosing the subject as suffering from pancreatitis when the protein or mRNA level of PDE4DIP or FGG is decreased compared to a control group; and
  • the present invention is a method for characterizing a respondent (i.e., dog) to a therapeutic agent for canine pancreatitis (i.e., companion diagnostic method), comprising the following steps:
  • step (b) the protein or mRNA level of SERPINA3 measured in step (a) is increased compared to the control group; If the protein or mRNA level of PDE4DIP or FGG is decreased compared to the control group, determining the subject as a responder to a treatment for canine pancreatitis;
  • the canine pancreatitis treatment agent is at least one selected from the group consisting of maropitant, ondansetron, Panoquell-CA1, and metoclopramide.
  • the "treatment” refers to all activities that improve or beneficially change the desired disease and metabolic abnormalities, and include methods such as chemotherapy, radiation therapy, surgical operation, biological therapy, or antibiotic administration. can be used.
  • the treatment may be performed through fluid treatment, drugs, plasma transfusion, and dietary control.
  • the chemotherapy refers to the act of using a chemical substance for the treatment of a specific disease and the entire drug used at that time.
  • the drug include antiemetics, gastroprotective drugs, antibiotics, and the like, and more specifically, maropitant, ondansetron, Panoquell-CA1, and metoclopramide.
  • the surgical operation includes any therapeutic or diagnostic procedure involving the methodical action of the hands or instruments in conjunction with the body of a subject to achieve a curative, therapeutic or diagnostic effect. .
  • the biological therapy refers to a treatment method that directly or indirectly uses the body's immune system using a biological agent containing a material derived from a living organism or a material produced using a living organism, and the biological agent is a physical , vaccines, allergens, antigens, hormones, cytokines, enzymes, blood and plasma, immune sera, monoclonal antibodies, fermented products, antitoxins, and laboratory diagnostics for which potency and safety cannot be assessed by chemical testing alone.
  • a biological agent containing a material derived from a living organism or a material produced using a living organism
  • the biological agent is a physical , vaccines, allergens, antigens, hormones, cytokines, enzymes, blood and plasma, immune sera, monoclonal antibodies, fermented products, antitoxins, and laboratory diagnostics for which potency and safety cannot be assessed by chemical testing alone.
  • SWATCH LC-MS analysis was performed on the peptides obtained through the above examples. To this end, a spectrum was obtained by performing LC-MS analysis using the parameters shown in FIG. 1d.
  • the iRT standard provided by the iRT-Kit was added to the prepared Peptide sample in 1/10 volume to the sample, following the supplier instructions (Reference: https://pubmed.ncbi.nlm Retention times were calibrated according to .nih.gov/22577012/).
  • the total amount of each sample was 40 ⁇ g and was dissolved in 40 ⁇ L of solution.
  • a 4 ⁇ L sample injected was analyzed using a SCIEX TripleTOF 5600+ system mass spectrometer with the following LC-MS/MS settings.
  • a nanoLC 425 (Eksigent, Dublin, CA, USA) was used as an analytical column with an Eksigent Micro Trap C18 column (ChromXP C18CL, 5 ⁇ m, 120 ⁇ ) and an Eksigent column (C18-CL, 0.3 ⁇ 150 mm, particle size 3). ⁇ m, pore size 120 ⁇ ), the column temperature was maintained at 40° C. and the sample was loaded onto the trap column using buffer A at a flow rate of 10 ⁇ L/min.
  • the peptide mixture was separated through a concentration gradient using buffer A and buffer B (0.1% formic acid in HPLC acetonitrile) at a flow rate of 5 ⁇ L/min by 57 minutes.
  • SWATH mass spectrometry run
  • the SWATH parameters were set as follows: Lower m/z limit 400; m/z upper limit 1250; Window overlap (Da) 1.0; The CES was 5 for the small window, 8 for the large window, and 10 for the largest window.
  • MS2 spectra were collected in the range 100–1500 m/z for 2.5 ms in high-sensitivity mode, with a total cycle time of 2.8 seconds.
  • MS parameters were set as follows: ion source gas 1 (GS1) 15 psi; ion source gas 2 (GS2) 20 psi; Curtain Gas (CUR) 30 psi; Temperature (TEM) 250 °C; Floating Ion Spray Voltage (ISVF) 5500V.
  • GS1 ion source gas 1
  • GS2 ion source gas 2
  • CUR Curtain Gas
  • TEM Temperature
  • ISVF Floating Ion Spray Voltage
  • SWATH LC-MS analysis was performed on each sample to obtain a spectrum result, and quantitative and quantitative analysis of proteins from the spectra was performed using DIA-NN software and Pan-human proteome library. Sexual information was extracted.
  • DIA-NN software and Pan-human proteome library.
  • Example 2 based on S-trap, 116 plasma samples were prepared as peptides with trypsin/LysC, and the amount of peptides was quantified using Nanodrop (FIG. 2). As a result, it was confirmed that a minimum of 214 ⁇ g of peptide was obtained at a maximum of 1,023 ⁇ g. Considering that only about 8 ⁇ g of peptide is usually analyzed during protein analysis, it was found that a sufficient amount of peptide was prepared for the study.
  • DEPs Differently expressed proteins
  • Fig. 4 The p value and fold change for 16 DEPs are shown in FIG. 5 .
  • Pentaxin is a C-Reactive protein, which the present inventors have identified as a biomarker that is equally increased in lymphoma.
  • CRP and SERPINA3 are also proteins identified in DEP in lymphoma.
  • 10 proteins, including PEPD were commonly reduced in disease groups.
  • SERPINA3 Sepin family A member 3
  • Angiotensinogen are both proteins that are increased in pancreatitis.
  • SEPINAA3 showed a specificity of 78.1% and a sensitivity of 81.8%, and ROC AUC was 0.857, indicating excellent discrimination power (FIG. 6a).
  • angiotensinogen had a sensitivity of 78.8% and a specificity of 87.5%, and the ROC AUC was 0.848, confirming that the disease discrimination power was similarly excellent (FIG. 6b).
  • pancreatitis group acute and chronic
  • normal control group have a probability that they can be distinguished from each other using quantitative characteristics of proteins (Fig. 7).
  • F1PAL5 which means angiotensinogen, is marked on the right-axis graph of FIG. 7 .
  • angiotensinogen was found to be increased in both chronic pancreatitis and acute pancreatitis, and SERPINA3 showed quantitative characteristics with a higher level in normal, chronic, and acute stages.
  • PDE4DIP was high in the normal group and decreased in the chronic and acute pancreatitis groups (FIG. 9). That is, it was confirmed that a panel for distinguishing chronic pancreatitis from acute pancreatitis could be developed using the quantitative characteristics of the proteins.
  • the present invention relates to a composition for diagnosing canine pancreatitis, and was completed by discovering a biomarker capable of diagnosing pancreatitis with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins.
  • the present inventors performed proteomic analysis using high-resolution mass spectrometry on plasma proteins of dogs suffering from pancreatitis, and selected biomarkers showing significant expression differences compared to normal controls. It was confirmed that the pancreatitis diagnostic model established using the selected biomarker can diagnose pancreatitis with high specificity, sensitivity, and accuracy.
  • the present invention is a non-invasive method using a small amount of blood, which enables prediction and early diagnosis of the risk of pancreatitis in dogs, thereby preserving the health of dogs, reducing the burden of guardians' medical expenses, and contributing to the improvement of the quality of veterinary consulting. It is expected that

Abstract

The present invention relates to a composition for diagnosis of canine pancreatitis. Leading to the present invention, a discovery was made of a biomarker capable of diagnosing pancreatitis with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins. Specifically, the present inventors performed proteomic analysis using high-resolution mass spectrometry on plasma proteins of dogs suffering from pancreatitis, and selected biomarkers showing significant expression differences compared to normal controls. It was observed that the pancreatitis diagnostic model established using the selected biomarker can diagnose pancreatitis with high specificity, sensitivity, and accuracy. Therefore, as a non-invasive method using a small amount of blood, which enables prediction and early diagnosis of the risk of pancreatitis in dogs, the present invention is expected to preserve the health of dogs, reduce the burden of owner medical expenses, and contribute to the improvement of the quality of veterinary consulting.

Description

반려견의 췌장염 진단용 바이오마커Biomarkers for diagnosis of pancreatitis in dogs
본 발명은 반려견의 췌장염 진단을 위한 바이오마커 및 이를 이용한 개의 췌장염 진단 방법 등에 관한 것이다.The present invention relates to a biomarker for diagnosing canine pancreatitis and a method for diagnosing canine pancreatitis using the same.
본 발명은 2021년 12월 1일에 출원된 한국특허출원 제10-2021-0170185호 및 2022년 11월 30일에 출원된 한국특허출원 제10-2022-0164050호에 기초한 우선권을 주장하며, 상기 출원들의 명세서 및 도면에 개시된 모든 내용은 본 출원에 원용된다.The present invention claims priority based on Korean Patent Application No. 10-2021-0170185 filed on December 1, 2021 and Korean Patent Application No. 10-2022-0164050 filed on November 30, 2022, All contents disclosed in the specification and drawings of the applications are incorporated into this application.
2019년 기준 대한민국의 반려동물 양육 가구 중 6세 이상 노령견을 양육하는 가구는 39.3%, 10세 이상의 노령견을 키우는 가구는 18%를 차지하며, 노령견 수의 증가와 함께 보호자들의 개의 질병에 대한 진단과 치료법에 관한 관심이 급증하고 있다. 특히, 난치성 질병은 질병의 초기 진단이 반려동물의 건강 수명 연장에 중요할 뿐 아니라 보호자의 의료비 지출을 감소시키기 위해서도 필요하다. 또한, 반려동물의 건강 수명 연장을 위해서는 무엇보다 난치성 질병의 치료 또는 진행정도를 완화시키기 위한 기술 개발이 지속적으로 필요하다.As of 2019, among households raising companion animals in Korea, 39.3% of households raising dogs aged 6 years or older and 18% raising dogs aged 10 years or older accounted for 18%. Interest in therapies is growing rapidly. In particular, for incurable diseases, early diagnosis of diseases is important not only for extending the health life span of companion animals, but also for reducing guardians' medical expenses. In addition, in order to extend the healthy lifespan of companion animals, it is necessary to continuously develop technologies to treat or alleviate the progress of intractable diseases.
췌장염 (pancreatitis)은 췌장 효소 등에 의해 췌장 분비샘에 파괴되거나, 췌장에 국소적으로 혹은 전체적으로 염증이 발생하는 질환이다. 췌장염은 인간뿐만 아니라 개를 포함한 기타 동물에서도 흔히 관찰되는 질환이다. 췌장염은 급성 및 만성 췌장염으로 나뉘는데, 급성 췌장염은 췌장의 외분비 기능이 손상되어 소화효소가 활성화되고, 이것이 췌장과 주변 조직을 공격해 심한 염증을 유발하여 발생한다. 급성 췌장염을 앓는 개는 구토, 설사, 복통 등을 일으키며 혈변과 같은 심각한 증상을 보이는 중증으로 접어들면 예후가 나쁠 수 있으나, 초기에 발견해 적극적으로 처치하면 생존율을 높일 수 있다. 만성 췌장염은 만성적인 염증으로 인해 외분비 및 내분비 기능 모두에 장애가 생기는 특징이 있다. 경미한 구토 및 설사 등을 동반하는데, 상태가 호전되거나 나빠지는 것을 반복하기도 한다. 개의 췌장염은 치사율이 40% 정도 되어 매우 높을 뿐만 아니라, 당뇨 등의 합병증을 유발할 수 있으므로 적기의 치료가 매우 중요하다. Pancreatitis is a disease in which pancreatic secretory glands are destroyed by pancreatic enzymes or the like, or inflammation occurs locally or entirely in the pancreas. Pancreatitis is a disease commonly observed in humans as well as other animals including dogs. Pancreatitis is divided into acute and chronic pancreatitis. Acute pancreatitis occurs when the exocrine function of the pancreas is impaired, digestive enzymes are activated, and this attacks the pancreas and surrounding tissues, causing severe inflammation. Dogs suffering from acute pancreatitis cause vomiting, diarrhea, abdominal pain, etc., and severe symptoms such as bloody stool can lead to a poor prognosis, but if detected early and actively treated, the survival rate can be increased. Chronic pancreatitis is characterized by impairment of both exocrine and endocrine functions due to chronic inflammation. It is accompanied by mild vomiting and diarrhea, and the condition may improve or worsen repeatedly. Canine pancreatitis has a mortality rate of about 40%, which is very high, and can cause complications such as diabetes, so timely treatment is very important.
개의 급성 췌장염 진단 방법으로 혈청 amylase 또는 lipase 농도 측정이 주로 이용되고 있으나, 상기 효소들은 다른 질병에서도 수준이 증가되는 경향을 보이기 때문에, 진단 면에서 부정확한 문제가 있다. 따라서, 반려견의 건강 수명을 연장하고 보호자의 치료비 부담을 절감하기 위해, 보다 간편하고 비침습적인 방법으로 반려견의 췌장염을 진단하거나 위험도를 스크리닝할 수 있는 방법이 필요한 실정이다. 그러나, 높은 정확도로 반려견의 췌장염을 진단할 수 있는 비침습적 방법은 아직까지 개발되지 않고 있다.As a method for diagnosing acute pancreatitis in dogs, measurement of serum amylase or lipase concentration is mainly used, but since the level of these enzymes tends to be increased in other diseases, there is a problem of inaccuracy in diagnosis. Therefore, in order to extend the healthy lifespan of dogs and reduce the burden of treatment costs on guardians, there is a need for a method capable of diagnosing or screening for pancreatitis in dogs in a simpler and non-invasive way. However, a non-invasive method capable of diagnosing canine pancreatitis with high accuracy has not yet been developed.
본 발명은 상기와 같은 문제점을 해결하기 위해 안출된 것으로서, 개의 혈장 단백질에 대한 정성적, 정량적 분석을 통해 높은 정확도와 민감도로 개에서의 췌장염을 진단할 수 있는 바이오마커를 발굴하여 완성된 것이다.The present invention was made to solve the above problems, and was completed by discovering a biomarker capable of diagnosing pancreatitis in dogs with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins.
따라서, 본 발명의 목적은 상기 바이오마커들의 단백질 또는 mRNA 수준을 측정하는 제제를 유효성분으로 포함하는, 개의 췌장염 진단용 조성물을 제공하는 것이다.Accordingly, an object of the present invention is to provide a composition for diagnosing canine pancreatitis, which contains, as an active ingredient, an agent for measuring protein or mRNA levels of the biomarkers.
본 발명의 다른 목적은 상기 바이오마커들의 단백질 또는 mRNA 수준을 측정하는 제제를 포함하는, 개의 췌장염 진단용 키트를 제공하는 것이다.Another object of the present invention is to provide a kit for diagnosing canine pancreatitis, including an agent for measuring protein or mRNA levels of the biomarkers.
본 발명의 또 다른 목적은 상기 바이오마커들의 단백질 또는 mRNA 수준을 측정하여 개의 췌장염을 진단하는 방법에 관한 것이다.Another object of the present invention relates to a method for diagnosing canine pancreatitis by measuring protein or mRNA levels of the biomarkers.
그러나, 본 발명이 이루고자 하는 기술적 과제는 이상에서 언급한 과제에 제한되지 않으며, 언급되지 않은 또 다른 과제들은 아래의 기재로부터 본 발명이 속하는 기술 분야의 통상의 지식을 가진 자에게 명확하게 이해될 수 있을 것이다.However, the technical problem to be achieved by the present invention is not limited to the above-mentioned problems, and other problems not mentioned can be clearly understood by those skilled in the art from the description below. There will be.
본 발명은 PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG (Fibrinogen gamma chain)로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제를 유효성분으로 포함하는, 개의 췌장염 진단용 조성물을 제공한다.The present invention relates to a dog product comprising, as an active ingredient, an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG (Fibrinogen gamma chain). A composition for diagnosing pancreatitis is provided.
본 발명의 일 구현예에서, 상기 SERPINA3의 단백질 또는 mRNA 수준은 정상 개체 대비 췌장염 개체에서 증가되어 있을 수 있으나, 이에 한정되지 않는다.In one embodiment of the present invention, the protein or mRNA level of SERPINA3 may be increased in pancreatitis subjects compared to normal subjects, but is not limited thereto.
본 발명의 다른 구현예에서, 상기 PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준은 정상 개체 대비 췌장염 개체에서 감소되어 있을 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the protein or mRNA level of the PDE4DIP or FGG may be reduced in pancreatitis subjects compared to normal subjects, but is not limited thereto.
본 발명의 또 다른 구현예에서, 상기 조성물은 Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), 및 Complement factor I로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA의 수준을 측정하는 제제를 더 포함할 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the composition comprises Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B) , Complement C3 (LOC484960), and may further include an agent for measuring the level of at least one protein or mRNA selected from the group consisting of Complement factor I, but is not limited thereto.
본 발명의 또 다른 구현예에서, 상기 단백질 수준을 측정하는 제제는 상기 단백질에 특이적인 항체 또는 앱타머일 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the agent for measuring the protein level may be an antibody or an aptamer specific to the protein, but is not limited thereto.
본 발명의 또 다른 구현예에서, 상기 mRNA 발현 수준을 측정하는 제제는 상기 mRNA에 특이적으로 결합하는 프라이머 세트 또는 프로브일 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the agent for measuring the mRNA expression level may be a primer set or a probe that specifically binds to the mRNA, but is not limited thereto.
본 발명의 또 다른 구현예에서, 상기 단백질 또는 mRNA 수준은 혈액, 전혈, 혈장, 혈청, 및 림프액으로 이루어진 군에서 선택된 하나 이상에서의 수준일 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the protein or mRNA level may be at least one level selected from the group consisting of blood, whole blood, plasma, serum, and lymph, but is not limited thereto.
또한, 본 발명은 본 발명에 따른 제제 또는 조성물을 포함하는, 개의 췌장염 진단용 키트를 제공한다.In addition, the present invention provides a kit for diagnosing canine pancreatitis, comprising the agent or composition according to the present invention.
또한, 본 발명은 하기 단계를 포함하는, 개의 췌장염 진단 방법을 제공한다:In addition, the present invention provides a method for diagnosing canine pancreatitis, comprising the following steps:
(S1) 피검체로부터 분리된 생물학적 시료에서 PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 단계; 및(S1) measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject; and
(S2) 상기 단계 (S1)에서 측정된 SERPINA3의 단백질 또는 mRNA 수준이 대조군에 비해 증가하거나; PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준이 대조군에 비해 감소한 경우, 췌장염으로 진단하거나 췌장염이 발병할 위험이 있는 것으로 판단하는 단계.(S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; Diagnosing pancreatitis or determining that there is a risk of developing pancreatitis when the protein or mRNA level of PDE4DIP or FGG is reduced compared to the control group.
본 발명의 일 구현예에서, 상기 방법은 상기 피검체로부터 분리된 생물학적 시료에서 Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), 및 Complement factor I로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA의 수준을 측정하는 단계를 더 포함할 수 있으나, 이에 한정되지 않는다.In one embodiment of the present invention, the method comprises Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, A step of measuring the level of at least one protein or mRNA selected from the group consisting of Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), and Complement factor I may be further included, but is not limited thereto.
본 발명의 다른 구현예에서, 상기 생물학적 시료는 혈액, 전혈, 혈장, 혈청, 및 림프액으로 이루어진 군에서 선택된 하나 이상일 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the biological sample may be at least one selected from the group consisting of blood, whole blood, plasma, serum, and lymph, but is not limited thereto.
본 발명의 또 다른 구현예에서, 상기 단백질 수준은 단백질 칩 분석, 면역 측정법, 리간드 바인딩 어세이, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) 분석, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) 분석, 방사선 면역 분석, 방사 면역 확산법, 오우크테로니 면역 확산법, 로케트 면역전기영동, 조직면역 염색, 보체 고정 분석법, 2차원 전기영동 분석, 액상 크로마토그래피-질량분석 (liquid chromatography-Mass Spectrometry; LC-MS), LC-MS/MS (liquid chromatography-Mass Spectrometry/ Mass Spectrometry), 웨스턴 블랏팅, ELISA (enzyme linked immunosorbentassay), 및 FACS으로 이루어진 군으로부터 선택된 하나 이상의 방법으로 측정되는 것일 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the protein level is measured by protein chip analysis, immunoassay, ligand binding assay, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) assay, radioimmunoassay, radioimmunodiffusion method, Oukteroni immunodiffusion method, rocket immunoelectrophoresis, tissue immunostaining, complement fixation assay, two-dimensional electrophoretic assay, liquid chromatography-mass At least one method selected from the group consisting of liquid chromatography-mass spectrometry (LC-MS), liquid chromatography-mass spectrometry/ mass spectrometry (LC-MS/MS), western blotting, enzyme linked immunosorbentassay (ELISA), and FACS It may be measured as, but is not limited thereto.
본 발명의 또 다른 구현예에서, 상기 mRNA 수준은 PCR, RNase 보호 분석법, 노던 블랏팅 (northern blotting), 서던 블랏팅 (southern blotting), In situ 교잡법, DNA 칩, 및 RNA 칩으로 이루어진 군으로부터 선택된 하나 이상의 방법으로 측정되는 것일 수 있으나, 이에 한정되지 않는다.In another embodiment of the present invention, the mRNA level is measured from the group consisting of PCR, RNase protection assay, northern blotting, southern blotting, in situ hybridization, DNA chip, and RNA chip. It may be measured by one or more selected methods, but is not limited thereto.
또한, 본 발명은 개의 췌장염 진단용 제제 또는 키트를 제조하기 위한, PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제의 용도를 제공한다.In addition, the present invention is an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG, for preparing an agent or kit for diagnosing canine pancreatitis. provides the use of
또한, 본 발명은 개의 췌장염 진단을 위한, PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제의 용도를 제공한다.In addition, the present invention provides the use of an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG for the diagnosis of canine pancreatitis. .
본 발명은 개의 췌장염 진단을 위한 조성물 등에 관한 것으로서, 개의 혈장 단백질에 대한 정성적, 정량적 분석을 통해 높은 정확도와 민감도로 췌장염을 진단할 수 있는 바이오마커를 발굴하여 완성된 것이다. 구체적으로, 본 발명자들은 췌장염을 앓고 있는 개의 혈장 단백질에 대해 고분해능 질량분석기를 이용한 단백체 분석을 수행하였으며, 정상 대조군과 비교하여 유의한 발현 차이를 보이는 바이오마커들을 선별하였다. 선별된 바이오마커를 이용하여 확립한 췌장염 진단 모델은 높은 특이도, 민감도, 및 정확도로 췌장염을 진단할 수 있음이 확인되었다. 따라서 본 발명은 소량의 혈액을 이용한 비침습적 방법으로서 반려견의 췌장염 위험도 예측 및 조기 진단을 가능케하는 바, 반려견의 건강을 보존하고 보호자의 의료비 부담을 절감할 뿐만 아니라, 수의학적 컨설팅의 질적 향상에도 기여할 것으로 기대된다.The present invention relates to a composition for diagnosing canine pancreatitis, and was completed by discovering a biomarker capable of diagnosing pancreatitis with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins. Specifically, the present inventors performed proteomic analysis using high-resolution mass spectrometry on plasma proteins of dogs suffering from pancreatitis, and selected biomarkers showing significant expression differences compared to normal controls. It was confirmed that the pancreatitis diagnostic model established using the selected biomarker can diagnose pancreatitis with high specificity, sensitivity, and accuracy. Therefore, the present invention is a non-invasive method using a small amount of blood, which enables prediction and early diagnosis of the risk of pancreatitis in dogs, thereby preserving the health of dogs, reducing the burden of guardians' medical expenses, and contributing to the improvement of the quality of veterinary consulting. It is expected that
도 1a는 MARS14 컬럼을 이용하여 상위 14개의 풍부한 혈장 단백질을 제거한 원리를 도식화한 도면이다.1a is a diagram illustrating the principle of removing the top 14 abundant plasma proteins using a MARS14 column.
도 1b는 상위 14개의 풍부한 혈장 단백질 및 미량 단백질을 전처리하고 UV 스펙트럼을 확인한 결과이다.Figure 1b shows the result of pre-processing the top 14 abundant plasma proteins and trace proteins and confirming the UV spectrum.
도 1c는 Suspension trap 방법으로 혈장 단백질을 펩티드로 제조한 과정을 나타낸 흐름도이다.Figure 1c is a flow chart showing the process of preparing plasma proteins into peptides by the suspension trap method.
도 1d는 SWATCH LC-MS 분석에 사용된 파라미터를 나타낸 그림이다.1d is a diagram showing parameters used in SWATCH LC-MS analysis.
도 2는 반려견들의 혈장 시료로부터 분리한 혈장 시료에 대해 Nano drop을 이용하여 정량적 분석을 수행한 결과이다.2 is a result of performing quantitative analysis using a nano drop on plasma samples separated from plasma samples of companion dogs.
도 3은 반려견 혈장 시료에서 정량된 단백질의 수를 나타낸 그래프이다.3 is a graph showing the number of proteins quantified in canine plasma samples.
도 4는 정상 대조군 대비 췌장염 개체에서 증가 또는 감소한 단백질들을 나타낸 Volcano plot이다.Figure 4 is a Volcano plot showing increased or decreased proteins in pancreatitis subjects compared to normal controls.
도 5는 정상 대조군 대비 췌장염 개체에서 증감된 16개 단백질들에 대한 정보를 나타낸 표이다.5 is a table showing information on 16 proteins increased or decreased in pancreatitis subjects compared to normal controls.
도 6a 및 6b는 정상 대조군 대비 췌장염 개체에서 증가된 단백질인 SERPINA3 (도 6a) 및 Angiotensinogen (도 6b)의 Box plot 및 ROC 커브를 나타낸 그림이다.6a and 6b are diagrams showing box plots and ROC curves of SERPINA3 (FIG. 6a) and Angiotensinogen (FIG. 6b), which are proteins increased in pancreatitis subjects compared to normal controls.
도 7은 정상 대조군 대비 췌장염 개체에서 차별적인 발현 수준을 보이는 15개 단백질을 이용한 PLS-DA 결과를 나타낸다.7 shows PLS-DA results using 15 proteins showing differential expression levels in subjects with pancreatitis compared to normal controls.
도 8은 Kruskal Wallis test를 이용하여 정상 대조군, 만성 췌장염 그룹, 급성 췌장염 그룹에서 차별적인 발현 수준을 보이는 23개 단백질들을 선별한 결과이다.8 is a result of screening 23 proteins showing differential expression levels in a normal control group, a chronic pancreatitis group, and an acute pancreatitis group using the Kruskal Wallis test.
도 9는 Angiotensinogen, SERPINA3, 및 PDE4DIP의 정상 대조군, 만성 췌장염 그룹, 급성 췌장염 그룹에서의 발현 수준을 비교한 Box plot이다 (좌측부터 순서대로, 급성 췌장염 그룹, 만성 췌장염 그룹, 및 정상 그룹에서의 발현을 나타냄). 9 is a box plot comparing the expression levels of Angiotensinogen, SERPINA3, and PDE4DIP in a normal control group, a chronic pancreatitis group, and an acute pancreatitis group (from the left, in order, expression in the acute pancreatitis group, chronic pancreatitis group, and normal group). represents).
도 10은 PDE4DIP, FGG, 및 SERPINA3의 3종 단백질들을 이용한 Logistic regression 모델에서의 AUC, 특이도, 민감도 분석 결과를 나타낸다.10 shows the results of AUC, specificity, and sensitivity analysis in a logistic regression model using three proteins of PDE4DIP, FGG, and SERPINA3.
본 발명은 개의 췌장염 진단을 위한 조성물 등에 관한 것으로서, 개의 혈장 단백질에 대한 정성적, 정량적 분석을 통해 높은 정확도와 민감도로 개에서의 췌장염을 진단할 수 있는 바이오마커를 발굴하여 완성된 것이다. 구체적으로, 본 발명자들은 정상 및 질병을 앓고 있는 개들의 혈장 단백질에 대해 고분해능 질량분석기를 통해 정량적, 정성적 분석을 수행하였으며, 이를 통해 개체간에 유의한 차이를 보이는 바이오마커들을 선별하였다. 또한, 상기 바이오마커들을 조합하여 확립된 진단 모델은 높은 특이도, 민감도, 및 정확도로 질병 개체와 정상 개체를 구별할 수 있음이 확인되었다. 따라서 상기 바이오마커들 및 이들의 조합을 통해 개의 췌장염의 정확한 진단이 가능할 뿐만 아니라, 평상시에도 췌장염의 위험도를 손쉽게 스크리닝할 수 있으므로, 반려견의 췌장염 조기 진단을 통해 수명을 연장시키고, 보호자의 의료비를 절감할 수 있을 것으로 기대된다. 특히, 본 발명에 따른 진단방법은 기존의 침습적인 진단 및 검사방법의 대안으로서, 채혈이라는 비교적 간단하고 경제적인 방법을 통해 질병의 진단이 가능한 이점이 있다.The present invention relates to a composition for diagnosing canine pancreatitis, and was completed by discovering a biomarker capable of diagnosing pancreatitis in dogs with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins. Specifically, the present inventors performed quantitative and qualitative analysis on plasma proteins of normal and diseased dogs through high-resolution mass spectrometry, and through this, biomarkers showing significant differences between individuals were selected. In addition, it was confirmed that the diagnostic model established by combining the above biomarkers can distinguish between diseased individuals and normal individuals with high specificity, sensitivity, and accuracy. Therefore, through the above biomarkers and their combination, it is not only possible to accurately diagnose pancreatitis in dogs, but also to easily screen the risk of pancreatitis even in normal times, thereby extending the life span and reducing the guardian's medical expenses through early diagnosis of pancreatitis in dogs. Expect to be able to do it. In particular, the diagnosis method according to the present invention is an alternative to conventional invasive diagnosis and examination methods, and has the advantage of being able to diagnose diseases through a relatively simple and economical method of blood sampling.
따라서, 본 발명의 주요 목적은, PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제를 유효성분으로 포함하는, 개체의 췌장염 진단용 조성물을 제공하는 것이다.Therefore, the main object of the present invention is to provide an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG as an active ingredient, It is to provide a composition for diagnosing pancreatitis in an individual.
본 발명에서 "개체"란 질병의 위험도 예측, 진단, 예후 예측, 또는 치료 등을 필요로 하는 대상을 의미하고, 보다 구체적으로는 비-인간인 영장류, 생쥐 (mouse), 쥐 (rat), 개, 고양이, 말, 및 소 등의 포유류를 의미할 수 있으나, 바람직하게는 개 (dogs; 학명, Canis lupus familiaris)를 의미할 수 있다.In the present invention, "subject" means a subject requiring risk prediction, diagnosis, prognosis prediction, or treatment of a disease, and more specifically, non-human primates, mice, rats, dogs , It may mean mammals such as cats, horses, and cows, but preferably means dogs (dogs; scientific name, Canis lupus familiaris).
본 발명에 있어서, 췌장염 (pancreatitis)은 췌장 효소 등에 의해 췌장 분비샘에 파괴되거나, 췌장에 국소적으로 혹은 전체적으로 염증이 발생하는 질환이다. 본 발명에 따른 췌장염은 급성 췌장염 및 만성 췌장염을 모두 포함한다. 급성 췌장염은 췌장의 외분비 기능이 손상되어 소화효소가 활성화되고, 이것이 췌장과 주변 조직을 공격해 심한 염증을 유발하여 발생한다. 급성 췌장염을 앓는 개는 구토, 설사, 복통 등을 일으키며 혈변과 같은 심각한 증상을 보이는 중증으로 접어들면 예후가 나쁠 수 있으나, 초기에 발견해 적극적으로 처치하면 생존율을 높일 수 있으므로, 조기진단이 무엇보다 중요하다. 만성 췌장염은 만성적인 염증으로 인해 외분비 및 내분비 기능 모두에 장애가 생기는 특징이 있다. 경미한 구토 및 설사 등을 동반하는데, 상태가 호전되거나 나빠지는 것을 반복하기도 한다. 췌장염은 명확히 밝혀진 원인이 없기 때문에 평상시에 발병 위험도를 스크리닝하거나 조기에 진단하는 것이 중요하다.In the present invention, pancreatitis is a disease in which pancreatic secretory glands are destroyed by pancreatic enzymes or the like, or inflammation occurs locally or entirely in the pancreas. Pancreatitis according to the present invention includes both acute pancreatitis and chronic pancreatitis. Acute pancreatitis occurs when the exocrine function of the pancreas is impaired, digestive enzymes are activated, and this attacks the pancreas and surrounding tissues, causing severe inflammation. Dogs suffering from acute pancreatitis cause vomiting, diarrhea, abdominal pain, and severe symptoms such as bloody stools. The prognosis may be poor, but early detection and active treatment can increase the survival rate, so early diagnosis is more important than anything else. do. Chronic pancreatitis is characterized by impairment of both exocrine and endocrine functions due to chronic inflammation. It is accompanied by mild vomiting and diarrhea, and the condition may improve or worsen repeatedly. Since pancreatitis has no clearly identified cause, it is important to screen for the risk of developing it or diagnose it early.
본 발명에 있어서, "진단"은 병리 상태의 존재 또는 특징을 확인하는 것을 의미하며, 췌장염의 존재 여부, 췌장염의 발병 여부, 췌장염의 발병 가능성 여부 (발병 위험도), 췌장염의 예후 등을 확인하는 것을 포함하는 의미일 수 있다.In the present invention, "diagnosis" means confirming the presence or characteristics of a pathological state, and confirming the presence or absence of pancreatitis, whether pancreatitis has occurred, the possibility of developing pancreatitis (risk of occurrence), the prognosis of pancreatitis, etc. It can mean including.
보다 구체적으로, 본 발명서에서 사용된 용어, "진단"은 특정 질병 또는 질환에 대한 한 객체의 감수성 (susceptibility)을 판정하는 것, 한 객체가 특정 질병 또는 질환을 현재 가지고 있는지 여부를 판정하는 것, 특정 질병 또는 질환에 걸린 한 객체의 예후 (prognosis) (예컨대, 종양 상태의 동정, 종양의 단계 결정 또는 치료에 대한 암의 반응성 결정)를 판정하는 것, 또는 테라메트릭스(therametrics) (예컨대, 치료 효능에 대한 정보를 제공하기 위하여 객체의 상태를 모니터링 하는 것)를 포함한다.More specifically, the term "diagnosis" used in the present invention refers to determining the susceptibility of a subject to a specific disease or disorder, and determining whether a subject currently has a specific disease or disorder. , determining the prognosis of a subject suffering from a particular disease or condition (e.g., identifying tumor status, determining the staging of a tumor, or determining the responsiveness of a cancer to treatment), or therametrics (e.g., treatment monitoring the state of the object to provide information about efficacy).
PDE4DIP (phosphodiesterase 4D interacting protein)은 포스포디에스터라제 4D를 세포의 골지체/중심체 영역에 고정시키는 역할을 하는 단백질이다. 인간에서, 비정상적인 PDE4DIP은 호산구 증가증 등과 관련된 골수증식장애 (myeloproliferative disorder)를 유도하며, 성체 송과체모세포종 (adult pineoblastoma) 및 성체 송과체실질종양 (adult pineal parenchymal tumor)과 관련이 있는 것으로 알려져 있다. 그러나, 개의 췌장염과 PDE4DIP에 대해서는 현재까지 보고된 바가 없다. 본 발명자들은 개의 혈장 단백체 분석을 통해 정상 그룹 대비 췌장염 그룹에서 PDE4DIP의 수준이 유의하게 감소되어 있음을 확인하였다. PDE4DIP에 대한 구체적인 정보는 Uniprot과 같은 공공 데이터베이스에서 확인할 수 있다 (Uniprot 등록번호, A0A8C0SUT4). PDE4DIP (phosphodiesterase 4D interacting protein) is a protein that serves to fix phosphodiesterase 4D to the Golgi/centrosome region of cells. In humans, abnormal PDE4DIP induces myeloproliferative disorders associated with eosinophilia and the like, and is known to be associated with adult pineoblastoma and adult pineal parenchymal tumor. However, there have been no reports of canine pancreatitis and PDE4DIP to date. The present inventors confirmed that the level of PDE4DIP was significantly reduced in the pancreatitis group compared to the normal group through the canine plasma proteomic analysis. Specific information on PDE4DIP can be found in public databases such as Uniprot (Uniprot registration number, A0A8C0SUT4).
본 발명에 있어서, SERPINA3 (Serpin family A member 3)는 세린 프로테아제를 억제하는 단백질 그룹인 serpin family 멤버이다. SERPINA3의 다형성은 조직 특이적으로 나타나며, 프로테아제 타겟팅에 영향을 미칠 수 있다. 인간에서, SERPINA3의 이상은 알츠하이머, 간 질환, 파킨슨병 등을 유발할 수 있는 것으로 보고되었는데, 개에서 SERPINA3의 발현 수준과 췌장염의 상관관계에 대해서는 현재까지 알려진 바 없다. 본 발명자들은 개의 혈장 단백체 분석을 통해 정상 그룹 대비 췌장염 그룹에서 증가되어 있음을 확인하였다. SERPINA3에 대한 구체적인 정보는 Uniprot 등에서 확인할 수 있다 (Uniprot 등록번호: A0A8I3MJD4).In the present invention, SERPINA3 (Serpin family A member 3) is a member of the serpin family, a protein group that inhibits serine proteases. Polymorphisms in SERPINA3 appear tissue-specific and may affect protease targeting. In humans, SERPINA3 abnormalities have been reported to cause Alzheimer's disease, liver disease, Parkinson's disease, etc., but the correlation between SERPINA3 expression level and pancreatitis in dogs has not been known to date. The present inventors confirmed that it was increased in the pancreatitis group compared to the normal group through the dog plasma proteomic analysis. Specific information on SERPINA3 can be found at Uniprot, etc. (Uniprot registration number: A0A8I3MJD4).
본 발명에 있어서, FGG (Fibrinogen gamma chain 또는 fibrinogen gamma gene)은 Fibrinogen alpha (FGA) 및 Fibrinogen beta (FGB)와 함께 중합되어 불용성 피브린 매트릭스 (fibrin matrix)를 형성하는 단백질이다. FGG는 혈전의 주요 성분 중 하나로 지혈에 중요한 역할을 하는데, 상처 복구의 초기 단계에서 기능하여 병변을 안정화시키고 재상피화 동안 세포 이동을 조절한다. 본 발명자들은 개의 혈장 단백체 분석을 통해 정상 그룹 대비 췌장염 그룹에서 감소되어 있음을 확인하였다. FGG에 대한 구체적인 정보는 Uniprot 등에서 확인할 수 있다 (Uniprot 등록번호: P12800).In the present invention, FGG (Fibrinogen gamma chain or fibrinogen gamma gene) is a protein that is polymerized with Fibrinogen alpha (FGA) and Fibrinogen beta (FGB) to form an insoluble fibrin matrix. FGG is one of the major components of blood clots and plays an important role in hemostasis. It functions in the early stages of wound repair to stabilize the lesion and regulate cell migration during re-epithelialization. The present inventors confirmed that it was reduced in the pancreatitis group compared to the normal group through the dog plasma proteomic analysis. Specific information on FGG can be found in Uniprot, etc. (Uniprot registration number: P12800).
본 발명의 일 구현예에서, 상기 조성물은 Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), 및 Complement factor I로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA의 수준을 측정하는 제제를 더 포함할 수 있다. 상기 단백질 (유전자)들은 정상 개체 대비 췌장염을 앓는 개에서 통계적으로 유의하게 증가 또는 감소한 것으로 확인된 마커들이다.In one embodiment of the present invention, the composition is Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), It may further include an agent for measuring the level of at least one protein or mRNA selected from the group consisting of Complement C3 (LOC484960) and Complement factor I. The above proteins (genes) are markers confirmed to be statistically significantly increased or decreased in dogs suffering from pancreatitis compared to normal individuals.
이중, “Pentaxin”은 “Pentraxin”으로도 지칭되는 단백질로, 펜트락신 단백질 도메인 (Pentraxin protein domain)을 포함하며 급성 면역학적 반응에 관여하는 것으로 알려져 있다. Pentaxin은 감염이나 염증 부위에서 조직세포, 대식세포, 단핵구, 수지상 세포 등에 의해 생성되며 균, 박테리아, 바이러스 등의 감염을 억제하는 역할을 한다. 그러나 개의 췌장염과 Pentaxin의 연관성에 대해서는 알려진 바가 없는데, 본 발명자들은 개의 혈장 단백체 분석을 통해 정상 개체 대비 췌장염 개체에서 Pentaxin 수준이 유의하게 증가되어 있음을 확인하였다. Pentaxin에 대한 구체적인 정보는 Uniprot과 같은 공공 데이터베이스에서 확인할 수 있다 (Uniprot 등록번호: A0A8C0T016).Among them, "Pentaxin" is a protein also referred to as "Pentraxin", which includes a Pentraxin protein domain and is known to be involved in an acute immunological response. Pentaxin is produced by tissue cells, macrophages, monocytes, and dendritic cells at the site of infection or inflammation, and plays a role in suppressing infections such as fungi, bacteria, and viruses. However, nothing is known about the relationship between canine pancreatitis and Pentaxin, but the present inventors confirmed that the level of Pentaxin was significantly increased in pancreatitis subjects compared to normal subjects through canine plasma protein analysis. Specific information on Pentaxin can be found in public databases such as Uniprot (Uniprot registration number: A0A8C0T016).
또한, “Angiotensinogen”은 혈압과 체액 균형을 조절하는 호르몬 시스템인 renin-angiotensin system (RAS)의 구성 요소이다. Angiotensinogen은 renin 기질로도 알려져 있으며, serpin family의 비-억제성 멤버이기도 하다. 개의 췌장염과 angiotensinogen의 연관성에 대해서는 알려진 바가 없는데, 본 발명자들은 개의 혈장 단백체 분석을 통해 정상 개체 대비 췌장염 개체에서 angiotensinogen 수준이 유의하게 증가되어 있음을 확인하였다. angiotensinogen에 대한 구체적인 정보는 Uniprot과 같은 공공 데이터베이스에서 확인할 수 있다 (Uniprot 등록번호: A0A8C0PY30).Also, “Angiotensinogen” is a component of the renin-angiotensin system (RAS), a hormone system that regulates blood pressure and body fluid balance. Angiotensinogen is also known as a renin substrate and is a non-inhibitory member of the serpin family. Although nothing is known about the association between canine pancreatitis and angiotensinogen, the present inventors confirmed that the level of angiotensinogen was significantly increased in pancreatitis subjects compared to normal subjects through canine plasma proteomic analysis. Specific information on angiotensinogen can be found in public databases such as Uniprot (Uniprot registration number: A0A8C0PY30).
본 발명에 있어서, 상기 Pentaxin, SERPINA3, 및 Angiotensinogen은 정상 대조군 대비 췌장염을 앓고 있는 개체에서 증가되어 있는 것을 특징으로 할 수 있다. 또한, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), Complement factor I, 또는 PDE4DIP은 정상 대조군 대비 췌장염을 앓고 있는 개체에서 감소되어 있는 것을 특징으로 할 수 있다.In the present invention, the Pentaxin, SERPINA3, and Angiotensinogen may be increased in subjects suffering from pancreatitis compared to normal controls. In addition, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), Complement factor I, or PDE4DIP It may be characterized as being reduced in individuals suffering from pancreatitis compared to normal controls.
본 명세서에 있어서, "수준이 증가되어 있다"는 것은, 검출되지 않던 것이 검출된 것, 또는 정상적인 수준보다 상대적으로 검출량이 많아지는 것을 의미한다. 예를 들어, 수준이 "증가"되어 있다는 것은, 실험군의 수준이 대조군의 그것에 비교하여 적어도 1%, 2%, 3%, 4%, 5%, 10% 또는 그 이상, 예를 들어, 5%, 10%, 20%, 30%, 40%, 또는 50%, 60%, 70%, 80%, 90% 또는 그 이상 높은, 및/또는 0.5배, 1.1배, 1.2배, 1.4배, 1.6배, 1.8배 또는 그 이상 높은 것을 의미한다. 구체적으로는, 대조군의 그것에 비해 1 내지 1.5배, 1.5 내지 2배, 2 내지 2.5배, 2.5 내지 3배, 3 내지 3.5배, 3.5 내지 4배, 4 내지 4.5배, 4.5 내지 5배, 5 내지 5.5배, 5.5 내지 6배, 6 내지 6.5배, 6.5 내지 7배, 7 내지 7.5배, 7.5 내지 8배, 8 내지 8.5배, 8.5 내지 9배, 9 내지 9.5배, 9.5 내지 10배, 또는 10배 이상 증가한 것을 의미할 수 있으나, 이에 한정되지 않는다. 이의 반대적 용어의 의미는 당업자라면 상기 정의에 준하여, 반대 의미를 가지는 것으로 이해 가능하다.In the present specification, "the level is increased" means that the undetected is detected, or the detected amount is relatively higher than the normal level. For example, a level "increased" means that the level in the experimental group is at least 1%, 2%, 3%, 4%, 5%, 10% or more, such as 5%, compared to that in the control group. , 10%, 20%, 30%, 40%, or 50%, 60%, 70%, 80%, 90% or higher, and/or 0.5x, 1.1x, 1.2x, 1.4x, 1.6x , 1.8 times higher or higher. Specifically, compared to that of the control group, 1 to 1.5 times, 1.5 to 2 times, 2 to 2.5 times, 2.5 to 3 times, 3 to 3.5 times, 3.5 to 4 times, 4 to 4.5 times, 4.5 to 5 times, 5 to 5 times. 5.5 times, 5.5 to 6 times, 6 to 6.5 times, 6.5 to 7 times, 7 to 7.5 times, 7.5 to 8 times, 8 to 8.5 times, 8.5 to 9 times, 9 to 9.5 times, 9.5 to 10 times, or 10 times It may mean an increase of more than double, but is not limited thereto. The meaning of the opposite term can be understood as having the opposite meaning according to the above definition by those skilled in the art.
본 명세서에서 사용된 용어, "측정"은 목적하는 물질 (본 발명의 경우 췌장염 바이오마커 유전자의 mRNA 또는 단백질)의 존재 (발현) 여부를 측정 및 확인하는 것, 또는 목적하는 물질의 존재 수준 (발현 수준)의 변화를 측정 및 확인하는 것을 모두 포함하는 의미이다. 즉, 상기 단백질의 발현 수준을 측정하는 것은 발현 여부를 측정하는 것 (즉, 발현 유무를 측정하는 것), 또는 상기 단백질의 질적, 양적 변화 수준을 측정하는 것을 의미한다. 상기 측정은 정성적인 방법 (분석)과 정량적인 방법을 모두 포함하여 제한 없이 수행될 수 있다. 단백질 수준의 측정에 있어서 정성적 방법과 정량적 방법의 종류는 당업계에 잘 알려져 있으며, 본 명세서에서 기술한 실험법들이 이에 포함된다. 각 방법 별로 구체적 단백질 수준 비교 방식은 당업계에 잘 알려져 있다. 따라서 상기 목적 단백질 검출은 콜라겐 단백질의 존재 여부의 검출, 또는 상기 단백질 수준의 증가(상향 조절) 또는 감소(하향 조절)를 확인하는 것을 포함하는 의미이다.As used herein, the term "measurement" refers to measuring and confirming the presence (expression) of a substance of interest (mRNA or protein of a pancreatitis biomarker gene in the case of the present invention), or the presence level (expression of a substance of interest) level) is meant to include both measuring and confirming changes. That is, measuring the expression level of the protein means measuring whether or not it is expressed (that is, measuring whether or not it is expressed) or measuring the level of qualitative or quantitative change of the protein. The measurement can be performed without limitation including both qualitative methods (assays) and quantitative methods. Types of qualitative and quantitative methods for measuring protein levels are well known in the art, and include the experimental methods described herein. Specific protein level comparison methods for each method are well known in the art. Therefore, detecting the target protein means detecting the presence or absence of the collagen protein, or confirming an increase (up-regulation) or decrease (down-regulation) of the protein level.
본 명세서에서 사용된 용어, "분석"은 바람직하게는 "측정"을 의미하는 것일 수 있고, 상기 정성분석은 목적하는 물질의 존재 여부를 측정 및 확인하는 것을 의미하는 것일 수 있으며, 상기 정량분석은 목적하는 물질의 존재 수준(발현 수준) 또는 양의 변화를 측정 및 확인하는 것을 의미하는 것일 수 있다. 본 발명에서 분석 또는 측정은 정성적인 방법과 정량적인 방법을 모두 포함하여 제한 없이 수행될 수 있으며, 바람직하게는 정량적인 측정이 수행되는 것일 수 있다.As used herein, the term "analysis" may preferably mean "measurement", and the qualitative analysis may mean measuring and confirming the presence or absence of a target substance, and the quantitative analysis may mean It may mean measuring and confirming changes in the presence level (expression level) or amount of the desired substance. In the present invention, analysis or measurement may be performed without limitation including both qualitative and quantitative methods, and preferably, quantitative measurement may be performed.
상기 조성물이 mRNA의 수준을 측정하기 위한 것인 경우, 상기 mRNA의 수준을 측정하는 제제는 mRNA에 특이적으로 결합하는 프라이머 세트 또는 프로브일 수 있다. 본 발명에 따른 바이오마커 유전자들의 mRNA에 특이적인 프라이머 세트 또는 프로브를 포함하는 본 발명의 조성물은 공지된 RNA를 감지하는 방법에 필요한 제제를 추가로 포함할 수 있다. 본 발명의 조성물을 이용하여 공지된 RNA를 감지하는 방법을 제한없이 사용함으로써 피검체에서 상기 바이오마커들의 mRNA의 수준을 측정할 수 있다.When the composition is for measuring the level of mRNA, the agent for measuring the level of mRNA may be a primer set or a probe that specifically binds to mRNA. The composition of the present invention including the mRNA-specific primer set or probe of the biomarker genes according to the present invention may further include an agent required for a known RNA detection method. The mRNA level of the biomarkers can be measured in a subject by using a known method for detecting RNA using the composition of the present invention without limitation.
본 발명에서 상기 "프라이머"는 표적 유전자 서열을 인지하는 단편으로서, 정방향 및 역방향의 프라이머 쌍을 포함하나, 바람직하게는, 특이성 및 민감성을 가지는 분석 결과를 제공하는 프라이머 쌍이다. 프라이머의 핵산 서열이 시료 내 존재하는 비-표적 서열과 불일치하는 서열이어서, 상보적인 프라이머 결합 부위를 함유하는 표적 유전자 서열만 증폭하고 비특이적 증폭을 유발하지 않는 프라이머일 때, 높은 특이성이 부여될 수 있다.In the present invention, the "primer" is a fragment that recognizes a target gene sequence, and includes a forward and reverse primer pair, preferably a primer pair that provides an analysis result having specificity and sensitivity. High specificity can be imparted when the nucleic acid sequence of the primer is a sequence that is inconsistent with the non-target sequence present in the sample, so that the primer amplifies only the target gene sequence containing a complementary primer binding site and does not cause non-specific amplification. .
본 발명에서 상기 "프로브"란 시료 내의 검출하고자 하는 표적 물질과 특이적으로 결합할 수 있는 물질을 의미하며, 상기 결합을 통하여 특이적으로 시료 내의 표적 물질의 존재를 확인할 수 있는 물질을 의미한다. 프로브의 종류는 당 업계에서 통상적으로 사용되는 물질로서 제한은 없으나, 바람직하게는 PNA (peptide nucleic acid), LNA (locked nucleic acid), 펩타이드, 폴리펩타이드, 단백질, RNA 또는 DNA일 수 있으며, 가장 바람직하게는 PNA이다. 보다 구체적으로, 상기 프로브는 바이오 물질로서 생물에서 유래되거나 이와 유사한 것 또는 생체 외에서 제조된 것을 포함하는 것으로, 예를 들어, 효소, 단백질, 항체, 미생물, 동식물 세포 및 기관, 신경세포, DNA, 및 RNA일 수 있으며, DNA는 cDNA, 게놈 DNA, 올리고뉴클레오타이드를 포함하며, RNA는 게놈 RNA, mRNA, 올리고뉴클레오타이드를 포함하며, 단백질의 예로는 항체, 항원, 효소, 펩타이드 등을 포함할 수 있다.In the present invention, the "probe" means a substance that can specifically bind to a target substance to be detected in a sample, and means a substance that can specifically confirm the presence of a target substance in a sample through the binding. The type of probe is not limited as a material commonly used in the art, but preferably may be peptide nucleic acid (PNA), locked nucleic acid (LNA), peptide, polypeptide, protein, RNA or DNA, and most preferably Most likely it is PNA. More specifically, the probe is a biomaterial, including one derived from or similar to a living organism or manufactured in vitro, for example, enzymes, proteins, antibodies, microorganisms, animal and plant cells and organs, nerve cells, DNA, and It may be RNA, DNA includes cDNA, genomic DNA, and oligonucleotides, RNA includes genomic RNA, mRNA, and oligonucleotides, and examples of proteins may include antibodies, antigens, enzymes, peptides, and the like.
본 발명에 따른 바이오마커 (단백질 또는 유전자)의 정보 (아미노산 서열, 핵산 서열 등)는 공지되어 있으므로, 당업자라면 이를 바탕으로 상기 단백질을 암호화하는 유전자에 특이적으로 결합하는 프라이머, 프로브, 또는 안티센스 뉴클레오티드를 용이하게 디자인할 수 있을 것이다. 프라이머 또는 프로브는 포스포아미다이트 (phosphoramidite) 고체지지체 합성법이나 기타 널리 공지된 방법을 이용하여 화학적으로 합성할 수 있으며, 모든 기능적 등가물을 포함한다. 또한 프라이머 또는 프로브는 mRNA와의 혼성화를 방해하지 않는 범위에서 당해 기술 분야에 공지된 방법에 따라 다양하게 변형시킬 수 있다. 이러한 변형의 예로는 메틸화, 캡화, 천연 뉴클레오티드 하나 이상의 동족체로의 치환 및 뉴클레오티드 간의 변형, 예를 들면 하전되지 않은 연결체 (예: 메틸 포스포네이트, 포스포트리에스테르, 포스포로아미데이트, 카바메이트 등) 또는 하전된 연결체 (예: 포스포로티오에이트, 포스포로디티오에이트 등), 그리고 형광 또는 효소를 이용한 표지물질(labeling material)의 결합 등이 있다.Since the information (amino acid sequence, nucleic acid sequence, etc.) of the biomarker (protein or gene) according to the present invention is known, a primer, probe, or antisense nucleotide that specifically binds to the gene encoding the protein based on this information (amino acid sequence, nucleic acid sequence, etc.) can be easily designed. Primers or probes may be chemically synthesized using a phosphoramidite solid support synthesis method or other well-known methods, and include all functional equivalents. In addition, primers or probes may be variously modified according to methods known in the art to the extent that hybridization with mRNA is not hindered. Examples of such modifications are methylation, capping, substitution of one or more homologs of the natural nucleotide, and modifications between nucleotides, such as uncharged linkages such as methyl phosphonates, phosphotriesters, phosphoroamidates, carbamates, etc. ) or charged linkages (eg, phosphorothioate, phosphorodithioate, etc.), and binding of fluorescent or enzymatic labeling materials.
본 발명의 조성물이 단백질의 수준을 측정하기 위한 것인 경우에 단백질의 수준을 측정하는 제제는 상기 단백질에 특이적인 항체 또는 앱타머일 수 있다.When the composition of the present invention is for measuring the level of a protein, the agent for measuring the level of the protein may be an antibody or an aptamer specific to the protein.
본 명세서에서 사용된 용어, "항체"는 항원성 부위에 대해서 지시되는 특이적인 단백질 분자를 의미한다. 본 발명의 목적상, 항체는 마커 단백질에 대해 특이적으로 결합하는 항체를 의미하며, 다클론 항체, 단클론 항체 및 재조합 항체를 모두 포함한다. 또한 항원-항체 결합성을 갖는 것이면 전체 항체의 일부도 본 발명의 항체에 포함되며, 본 발명 단백질에 특이적으로 결합하는 모든 종류의 면역글로불린 항체가 포함된다. 예를 들어 2개의 전체 길이의 경쇄 및 2개의 전체 길이의 중쇄를 갖는 완전한 형태의 항체뿐 아니라 항체 분자의 기능적인 단편, 즉 항원 결합 기능을 갖는 Fab, F(ab'), F(ab')2 및 Fv 등을 포함한다. 나아가 본 발명의 항체에는 본 발명 단백질에 특이적으로 결합할 수 있는 것이라면 인간화 항체, 키메릭 항체 등의 특수 항체와 재조합 항체도 포함된다.As used herein, the term "antibody" refers to a specific protein molecule directed against an antigenic site. For the purposes of the present invention, an antibody means an antibody that specifically binds to a marker protein, and includes both polyclonal antibodies, monoclonal antibodies and recombinant antibodies. In addition, as long as they have antigen-antibody binding properties, a part of the entire antibody is also included in the antibody of the present invention, and all types of immunoglobulin antibodies that specifically bind to the protein of the present invention are included. For example, complete antibodies with two full-length light chains and two full-length heavy chains, as well as functional fragments of antibody molecules, i.e. Fab, F(ab'), F(ab') with antigen-binding function 2 and Fv; Furthermore, antibodies of the present invention include special antibodies such as humanized antibodies and chimeric antibodies and recombinant antibodies as long as they can specifically bind to the protein of the present invention.
본 명세서에서 사용된 용어, "앱타머 (aptamer)"는 시료 내의 검출하고자 하는 분석물질과 특이적으로 결합할 수 있는 물질로 그 자체로 안정된 삼차 구조를 가지는 단일 가닥 핵산(DNA, RNA, 또는 변형 핵산)을 의미하는 것으로, 특이적으로 시료 내의 표적 단백질의 존재를 확인할 수 있다. 앱타머의 제조는 일반적인 앱타머의 제조 방법에 따라, 확인하고자 하는 표적 단백질에 대해 선택적이고 높은 결합력을 가지는 올리고뉴클레오티드의 서열을 결정하여 합성한 후, 올리고뉴클레오티드의 5' 말단이나 3' 말단을 앱타머 칩의 관능기에 결합할 수 있도록, -SH, -COOH, -OH 또는 NH2로 변형을 시킴으로써 이루어질 수 있으나, 이에 제한되지 않는다.As used herein, the term "aptamer" refers to a substance capable of specifically binding to an analyte to be detected in a sample, and a single-stranded nucleic acid (DNA, RNA, or modified nucleic acid) having a stable tertiary structure in itself. nucleic acid), it is possible to specifically confirm the presence of a target protein in a sample. The aptamer is synthesized by determining the sequence of an oligonucleotide that is selective and highly binding to the target protein to be identified according to the general aptamer preparation method, and then the 5' or 3' end of the oligonucleotide is applied. It may be made by modification with -SH, -COOH, -OH or NH 2 so that it can bind to the functional group of the timer chip, but is not limited thereto.
본 발명의 조성물은 상기 바이오마커 단백질을 감지하는 방법에 필요한 제제를 추가적으로 포함할 수 있으며, 본 조성물을 이용하여 공지된 단백질을 감지하는 방법을 제한없이 사용하여 피검체 (또는 피검체로부터 수득한 생물학적 시료)에서 단백질의 발현 수준을 측정할 수 있다.The composition of the present invention may additionally include an agent required for the method of detecting the biomarker protein, and the subject (or biological obtained from the subject) may be used without limitation by using a known protein detection method using the present composition. The expression level of the protein in the sample) can be measured.
본 발명에 따른 조성물은 진단을 필요로 하는 개체로부터 분리된 생물학적 시료의 분석을 위해 사용될 수 있다. 본 발명에 있어서 "생물학적 시료"란 췌장염을 진단하거나 이의 발병 위험도 등을 예측하고자 하는 피검체로부터 채취된 것이라면 제한 없이 포함될 수 있다. 예를 들어, 상기 생물학적 시료는 액, 전혈, 혈장, 소변, 타액, 조직, 세포, 기관, 골수, 미세침흡인 검체, 중심부바늘생검(core needle biopsy) 검체, 및 진공흡입생검 검체 등으로부터 선택될 수 있다. 바람직하게는, 본 발명에 따른 조성물은 비침습적 진단을 위한 것으로서, 상기 생물학적 시료는 혈액, 전혈, 혈장, 혈청, 및 림프액으로 이루어진 군에서 선택된 하나 이상일 수 있다.The composition according to the present invention can be used for analysis of a biological sample isolated from a subject in need of diagnosis. In the present invention, the "biological sample" may be included without limitation as long as it is collected from a subject to diagnose pancreatitis or predict the risk of developing it. For example, the biological sample may be selected from liquid, whole blood, plasma, urine, saliva, tissue, cell, organ, bone marrow, fine needle aspiration specimen, core needle biopsy specimen, and vacuum aspiration biopsy specimen. can Preferably, the composition according to the present invention is for non-invasive diagnosis, and the biological sample may be at least one selected from the group consisting of blood, whole blood, plasma, serum, and lymph.
상기 생물학적 시료는 검출 또는 진단에 사용하기 전에 전처리할 수 있다. 예를 들어, 균질화 (homogenization), 여과, 증류, 추출, 농축, 방해 성분의 불활성화, 시약의 첨가 등을 포함할 수 있다. 상기 시료는 단백질 마커의 탐지 감도를 증가시키도록 준비될 수 있는데, 예를 들어 피험체로부터 수득한 시료는 음이온 교환 크로마토그래피, 친화도 크로마토그래피, 크기별 배제 크로마토그래피 (size exclusion chromatography), 액체 크로마토그래피, 연속추출 (sequential extraction) 또는 젤 전기영동 등의 방법을 이용하여 전처리될 수 있다.The biological sample may be pretreated before being used for detection or diagnosis. For example, it may include homogenization, filtration, distillation, extraction, concentration, inactivation of interfering components, addition of reagents, and the like. The sample may be prepared to increase the detection sensitivity of a protein marker, for example, a sample obtained from a subject may be subjected to anion exchange chromatography, affinity chromatography, size exclusion chromatography, liquid chromatography , it may be pretreated using methods such as sequential extraction or gel electrophoresis.
또한, 본 발명은 본 발명에 따른 조성물을 포함하는, 개의 췌장염 진단용 키트를 제공할 수 있다. In addition, the present invention can provide a kit for diagnosing canine pancreatitis, comprising the composition according to the present invention.
본 발명에 있어서, "키트 (kit)"란 특히 시료 내에 포함되어 있는, 본 발명에 따른 바이오마커들의 mRNA 또는 단백질의 양을 측정하여 췌장염을 진단할 수 있는 검진용 기기 또는 세트 등을 의미하며, 개체로부터 분리된 생물학적 시료로부터 상기 유전자들의 발현량을 측정할 수 있는 형태라면 제한이 없다. 예컨대, 상기 키트는 RT-PCR 키트, DNA 칩 키트, ELISA 키트, 단백질 칩 키트, 래피드 (Rapid) 키트, 질량분석 키트, 마이크로어레이 키트, 또는 MRM (Multiple reaction monitoring) 키트 등 일 수 있으나, 이에 제한되는 것은 아니다. 따라서, 본 발명의 키트에는 표적 단백질을 마커로 인식하는 항체 또는 mRNA를 마커로 인식하는 프라이머 세트, 프로브뿐만 아니라 분석 방법에 적합한 한 종류 또는 그 이상의 다른 구성 성분 조성물, 용액 또는 장치가 포함될 수 있다. 이때, 상기 유전자, mRNA, 또는 단백질의 발현 수준을 검출하는 물질은 1회 이상 횟수에 제한 없이 작용시킬 수 있으며, 각 물질을 적용하는 선후에는 제한이 없고, 각 물질의 적용은 동시에 진행될 수도 있고 미시에 진행될 수도 있다.In the present invention, "kit" refers to a device or set for diagnosis that can diagnose pancreatitis by measuring the amount of mRNA or protein of the biomarkers according to the present invention, which are included in a sample. There is no limitation as long as the expression level of the genes can be measured from a biological sample isolated from an individual. For example, the kit may be an RT-PCR kit, a DNA chip kit, an ELISA kit, a protein chip kit, a Rapid kit, a mass spectrometry kit, a microarray kit, or a multiple reaction monitoring (MRM) kit, but is limited thereto. it is not going to be Accordingly, the kit of the present invention may include an antibody recognizing a target protein as a marker, a primer set recognizing mRNA as a marker, or a probe, as well as one or more other component compositions, solutions, or devices suitable for an analysis method. At this time, the substance for detecting the expression level of the gene, mRNA, or protein can be acted on one or more times without limitation, there is no limitation before and after applying each substance, and the application of each substance may be performed simultaneously or microscopically. may proceed to
또한, 본 발명에 따른 키트는, 본 발명에 따른 진단방법 등이 기재된 설명서를 더 포함할 수 있다.In addition, the kit according to the present invention may further include instructions describing the diagnostic method and the like according to the present invention.
본 발명의 또 다른 목적은, 하기 단계를 포함하는, 개체의 췌장염 진단 방법 또는 개의 췌장염 진단을 위한 정보제공방법을 제공하는 것이다:Another object of the present invention is to provide a method for diagnosing pancreatitis in an individual or a method for providing information for diagnosing pancreatitis in a dog, including the following steps:
(S1) 피검체로부터 분리된 생물학적 시료에서 PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 단계; 및(S1) measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject; and
(S2) 상기 단계 (S1)에서 측정된 SERPINA3의 단백질 또는 mRNA 수준이 대조군에 비해 증가하거나; PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준이 대조군에 비해 감소한 경우, 췌장염으로 진단하거나 췌장염이 발병할 위험이 있는 것 (발병할 가능성이 높은 것)으로 판단하는 단계.(S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; If the protein or mRNA level of PDE4DIP or FGG is reduced compared to the control group, diagnosing pancreatitis or judging that there is a risk (high probability of developing) pancreatitis.
본 발명의 일 구현예에서, 상기 방법은 상기 피검체로부터 분리된 생물학적 시료에서 Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), 및 Complement factor I로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA의 수준을 측정하는 단계를 더 포함할 수 있으나, 이에 한정되지 않는다.In one embodiment of the present invention, the method comprises Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, A step of measuring the level of at least one protein or mRNA selected from the group consisting of Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), and Complement factor I may be further included, but is not limited thereto.
상기 방법은, 상기 피검체의 Pentaxin, SERPINA3, 및/또는 Angiotensinogen의 단백질 또는 mRNA 수준이 대조군에 비해 증가한 경우 췌장염으로 진단하거나 췌장염이 발병할 위험이 있는 것 (발병할 가능성이 높은 것)으로 판단하는 단계를 더 포함할 수 있다.In the method, if the protein or mRNA level of Pentaxin, SERPINA3, and / or Angiotensinogen in the subject is increased compared to the control group, pancreatitis is diagnosed or pancreatitis is diagnosed as having a risk (high probability of developing) Further steps may be included.
또한, 상기 방법은, 상기 피검체의 Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), Complement factor I, 및/또는 PDE4DIP의 수준이 대조군에 비해 감소한 경우 췌장염으로 진단하거나 췌장염이 발병할 위험이 있는 것 (발병할 가능성이 높은 것)으로 판단하는 단계를 더 포함할 수 있다.In addition, the method, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960) of the subject , Complement factor I, and / or the level of PDE4DIP is reduced compared to the control group, the step of diagnosing pancreatitis or determining that there is a risk of developing pancreatitis (high probability of developing) may be further included.
본 발명에 따른 진단방법은 Receiver operating characteristics 분석시 Area under curve가 0.7 이상, 0.75 이상, 0.8 이상, 0.85 이상, 0.9 이상, 0.93 이상, 0.95 이상, 0.96 이상, 0.97 이상, 0.98 이상, 또는 0.99 이상일 수 있다. 또한, 본 발명에 따른 진단방법은 특이도 및/또는 민감도가 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 93% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 또는 99% 이상일 수 있다.In the diagnostic method according to the present invention, when analyzing receiver operating characteristics, the area under curve may be 0.7 or more, 0.75 or more, 0.8 or more, 0.85 or more, 0.9 or more, 0.93 or more, 0.95 or more, 0.96 or more, 0.97 or more, 0.98 or more, or 0.99 or more. there is. In addition, the diagnostic method according to the present invention has a specificity and / or sensitivity of 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 93% or more, 95% or more, 96% or more, 97% or more or more, 98% or more, or 99% or more.
예컨대, 본 발명에 따른 진단방법이 상기 SERPINA3의 단백질 또는 mRNA 수준을 측정하는 단계를 포함하는 경우, 진단 특이도는 70% 이상 또는 75% 이상일 수 있고, 진단 민감도는 70% 이상, 75% 이상, 또는 80% 이상일 수 있으며, ROC AUC는 0.75 이상, 0.8 이상, 또는 0.85 이상일 수 있으나, 이에 한정되는 것은 아니다.For example, when the diagnostic method according to the present invention includes the step of measuring the protein or mRNA level of SERPINA3, the diagnostic specificity may be 70% or more or 75% or more, and the diagnostic sensitivity is 70% or more, 75% or more, Or it may be 80% or more, and the ROC AUC may be 0.75 or more, 0.8 or more, or 0.85 or more, but is not limited thereto.
본 발명에 따른 진단방법이 상기 Angiotensinogen의 단백질 또는 mRNA 수준을 측정하는 단계를 포함하는 경우, 진단 특이도는 75% 이상, 80% 이상, 또는 85% 이상일 수 있고, 진단 민감도는 70% 이상 또는 75% 이상일 수 있으며, ROC AUC는 0.75 이상 또는 0.8 이상일 수 있으나, 이에 한정되는 것은 아니다.When the diagnostic method according to the present invention includes the step of measuring the protein or mRNA level of the angiotensinogen, the diagnostic specificity may be 75% or more, 80% or more, or 85% or more, and the diagnostic sensitivity may be 70% or more or 75% or more. % or more, and the ROC AUC may be 0.75 or more or 0.8 or more, but is not limited thereto.
특히, 본 발명에 따른 바이오마커의 조합의 수준을 측정하는 경우, 진단 정확도는 더욱 높아질 수 있다.In particular, when the level of the biomarker combination according to the present invention is measured, the diagnostic accuracy can be further increased.
예컨대, 본 발명에 따른 진단방법이 PDE4DIP, FGG, 및 SERPINA3의 단백질 또는 mRNA의 수준을 측정하는 단계를 포함하는 경우, 진단 민감도는 80% 이상, 85% 이상, 90% 이상, 93% 이상, 또는 95% 이상일 수 있고, 진단 특이도는 0.7 이상, 0.75 이상, 또는 0.8 이상일 수 있으며, ROC AUC는 80% 이상, 85% 이상, 90% 이상, 93% 이상, 또는 95% 이상일 수 있으나, 이에 한정되는 것은 아니다.For example, when the diagnostic method according to the present invention includes the step of measuring the protein or mRNA levels of PDE4DIP, FGG, and SERPINA3, the diagnostic sensitivity is 80% or more, 85% or more, 90% or more, 93% or more, or 95% or greater, diagnostic specificity may be 0.7 or greater, 0.75 or greater, or 0.8 or greater, and ROC AUC may be 80% or greater, 85% or greater, 90% or greater, 93% or greater, or 95% or greater. it is not going to be
또한, 본 발명에 따른 진단방법은 췌장염으로 진단된 개체에서, 상기 췌장염의 종류 (만성 또는 급성)를 판단하는데 사용될 수 있다.In addition, the diagnostic method according to the present invention can be used to determine the type (chronic or acute) of pancreatitis in a subject diagnosed with pancreatitis.
에컨대, 본 발명에 따른 진단방법이 SERPINA3의 mRNA 또는 단백질 수준을 측정하는 단계를 포함하고, 이 때 피검체의 SERPINA3의 mRNA 또는 단백질 수준이 대조군에 비해 증가되어 있는 경우, 상기 피검체는 급성 췌장염으로 진단될 수 있다. 여기서, 상기 대조군은 정상 개체 또는 만성 췌장염을 앓고 있는 개체일 수 있다.For example, the diagnostic method according to the present invention includes measuring the mRNA or protein level of SERPINA3, and at this time, if the mRNA or protein level of SERPINA3 in the subject is increased compared to the control group, the subject has acute pancreatitis can be diagnosed as Here, the control group may be a normal individual or an individual suffering from chronic pancreatitis.
또한, 본 발명에 따른 진단방법이 PDE4DIP의 단백질 또는 mRNA 수준을 측정하는 단계를 포함하고, 이 때 피검체의 PDE4DIP의 단백질 또는 mRNA 수준이 대조군에 비해 감소되어 있는 경우, 상기 피검체는 급성 췌장염으로 진단될 수 있다. 여기서, 상기 대조군은 정상 개체 또는 만성 췌장염을 앓고 있는 개체일 수 있다.In addition, the diagnostic method according to the present invention includes the step of measuring the protein or mRNA level of PDE4DIP, and at this time, if the protein or mRNA level of PDE4DIP in the subject is reduced compared to the control group, the subject is diagnosed with acute pancreatitis. can be diagnosed. Here, the control group may be a normal individual or an individual suffering from chronic pancreatitis.
본 발명에 따른 바이오마커, 생물학적 시료, 피검체 등과 관련된 구체적인 설명은 전술하였으므로 생략한다.Since the detailed description related to the biomarker, biological sample, subject, etc. according to the present invention has been described above, it will be omitted.
본 발명에서 사용된 용어, "정보제공방법(method for providing information)"이란, 질환의 진단에 관한 정보를 제공하는 방법으로서, 개체의 생물학적 시료를 분석하거나, 본 발명에 따른 바이오마커들의 수준의 증감을 확인하여 질환의 발병이나 발병 가능성(위험성)에 대한 정보를 획득하는 방법을 의미한다. 예컨대, 본 발명에 따른 바이오마커의 수준을 측정하고 대조군과 비교하여 개체에서 췌장염이 발병할 가능성이 있는지, 또는 췌장염이 발병할 가능성이 상대적으로 높은지, 또는 췌장염이 이미 발병하였는지에 대한 정보를 제공하는 방법으로서, 상기 방법을 통하여 췌장염 발병 위험성, 즉, 고위험군에 대해서도 예측할 수 있으며, 이를 췌장염의 예방 및 치료에 관한 정보를 제공하는 방법으로서도 사용할 수도 있다.As used herein, the term "method for providing information" refers to a method for providing information on diagnosis of a disease by analyzing a biological sample of a subject or increasing or decreasing the level of biomarkers according to the present invention. It refers to a method of obtaining information on the onset or onset (risk) of a disease by checking For example, a method for measuring the level of a biomarker according to the present invention and comparing it with a control group to provide information on whether an individual is likely to develop pancreatitis, has a relatively high likelihood of developing pancreatitis, or has already developed pancreatitis As a result, the risk of developing pancreatitis, that is, the high-risk group, can also be predicted through the method, and it can also be used as a method of providing information on the prevention and treatment of pancreatitis.
본 발명에 있어서, "대조군 (control)"은 정상 개체 또는 췌장염을 앓는 개체로부터 분리된 생물학적 시료일 수 있다. In the present invention, a "control" may be a biological sample isolated from a normal subject or a subject suffering from pancreatitis.
본 발명에 있어서, 단백질 수준을 측정하는 방법은 당업계에 공지된 단백질 측정 방법에 의한 것이라면 특별한 제한은 없으나, 단백질 칩 분석, 면역 측정법, 리간드 바인딩 어세이, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) 분석, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) 분석, 방사선 면역 분석, 방사 면역 확산법, 오우크테로니 면역 확산법, 로케트 면역전기영동, 조직면역 염색, 보체 고정 분석법, 2차원 전기영동 분석, 액상 크로마토그래피-질량분석 (liquid chromatography-Mass Spectrometry; LC-MS), LC-MS/MS (liquid chromatography-Mass Spectrometry/ Mass Spectrometry), 웨스턴 블랏팅, ELISA (enzyme linked immunosorbentassay), 및 FACS 등의 방법에 의해 측정할 수 있다. In the present invention, the method for measuring the protein level is not particularly limited as long as it is by a protein measuring method known in the art, but protein chip analysis, immunoassay, ligand binding assay, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, radioimmunoassay, radioimmunodiffusion method, Oukteroni immunodiffusion method, rocket immunoelectrophoresis, tissue immunostaining, Complement fixation method, two-dimensional electrophoretic analysis, liquid chromatography-Mass Spectrometry (LC-MS), LC-MS/MS (liquid chromatography-Mass Spectrometry/ Mass Spectrometry), Western blotting, ELISA ( enzyme linked immunosorbent assay), and FACS.
본 발명에 있어서, mRNA 수준을 측정하는 방법은 당업계에 공지된 mRNA 측정 방법에 의한 것이라면 특별한 제한은 없으나, PCR, RNase 보호 분석법, 노던 블랏팅(northern blotting), 서던 블랏팅(southern blotting), In situ 교잡법, DNA 칩, 및/또는 RNA 칩 등의 방법에 의해 측정할 수 있다.In the present invention, the method for measuring the mRNA level is not particularly limited as long as it is by a method for measuring mRNA known in the art, but PCR, RNase protection assay, Northern blotting, Southern blotting, It can be measured by methods such as in situ hybridization, DNA chip, and/or RNA chip.
또한, 본 발명은 개체 (예컨대, 개)의 췌장염 진단기기를 제공할 수 있다.In addition, the present invention may provide a device for diagnosing pancreatitis in an individual (eg, dog).
본 발명의 상기 진단기기의 측정부는 목적하는 개체로부터 얻어진 생물학적 시료에 대하여 본 발명에 따른 바이오마커, 예컨대, PDE4DIP, SERPINA3, 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 이를 암호화하는 유전자의 발현 수준을 측정하는 제제를 이용하여 단백질 또는 유전자의 발현 수준을 측정할 수 있다. 상기 측정부에서 상기 제제를 이용하여 상기 단백질 또는 유전자의 발현 정도를 확인함으로써 췌장염을 진단하거나, 췌장염의 발병 위험이 높은 것으로 진단할 수 있다. The measuring unit of the diagnostic device of the present invention measures the expression level of at least one protein selected from the group consisting of a biomarker according to the present invention, for example, PDE4DIP, SERPINA3, and FGG, or a gene encoding the same, with respect to a biological sample obtained from a subject of interest. The expression level of a protein or gene can be measured using a measurement agent. Pancreatitis can be diagnosed or diagnosed as having a high risk of developing pancreatitis by checking the expression level of the protein or gene using the preparation in the measuring unit.
본 발명의 상기 진단기기는, 상기 측정부에서 얻어진 상기 단백질 또는 유전자의 발현 정도로부터 개체의 췌장염의 유무, 병기, 또는 유형 등을 예측하여 출력하는 검출부를 추가로 더 포함할 수 있다.The diagnostic device of the present invention may further include a detection unit that predicts and outputs the presence, stage, or type of pancreatitis of an individual based on the expression level of the protein or gene obtained from the measurement unit.
본 발명에서 상기 검출부는, 상기 측정부에서 얻어진 상기 단백질 또는 유전자의 발현 정도의 범주에 따라 췌장염에 관한 정보를 생성하여 분류함으로써 췌장염을 진단할 수 있다.In the present invention, the detection unit can diagnose pancreatitis by generating and classifying information on pancreatitis according to the category of the expression level of the protein or gene obtained by the measurement unit.
또한, 본 발명은 하기 단계를 포함하는, 개에서의 췌장염 예방 또는 치료방법을 제공한다:In addition, the present invention provides a method for preventing or treating pancreatitis in dogs, comprising the following steps:
(S1) 피검체로부터 분리된 생물학적 시료에서 PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 단계; (S1) measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject;
(S2) 상기 단계 (S1)에서 측정된 SERPINA3의 단백질 또는 mRNA 수준이 대조군에 비해 증가하거나; PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준이 대조군에 비해 감소한 경우, 상기 피검체를 췌장염을 앓고 있는 것으로 진단하는 단계; 및(S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; diagnosing the subject as suffering from pancreatitis when the protein or mRNA level of PDE4DIP or FGG is decreased compared to a control group; and
(S3) 상기 단계 (S2)에서 췌장염을 앓는 것으로 진단된 피검체에서 췌장염을 치료하는 단계.(S3) treating pancreatitis in the subject diagnosed as suffering from pancreatitis in step (S2).
또한, 본 발명은 개의 췌장염 치료제에 대한 반응개체 (즉, 개)의 특성화 방법 (즉, 동반진단 방법)으로서, 하기 단계를 포함하고:In addition, the present invention is a method for characterizing a respondent (i.e., dog) to a therapeutic agent for canine pancreatitis (i.e., companion diagnostic method), comprising the following steps:
(a) 피검체로부터 분리된 생물학적 시료에서 PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 단계; 및(a) measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject; and
(b) 상기 단계 (a)에서 측정된 SERPINA3의 단백질 또는 mRNA 수준이 대조군에 비해 증가하거나; PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준이 대조군에 비해 감소한 경우, 상기 피검체를 개의 췌장염 치료제에 대한 반응자로 판단하는 단계,(b) the protein or mRNA level of SERPINA3 measured in step (a) is increased compared to the control group; If the protein or mRNA level of PDE4DIP or FGG is decreased compared to the control group, determining the subject as a responder to a treatment for canine pancreatitis;
상기 개의 췌장염 치료제는 maropitant, ondansetron, Panoquell-CA1, 및 metoclopramide로 이루어진 군에서 선택된 하나 이상인 것을 특징으로 하는, 개의 췌장염 치료제에 대한 반응개체의 특성화 방법을 제공한다.The canine pancreatitis treatment agent is at least one selected from the group consisting of maropitant, ondansetron, Panoquell-CA1, and metoclopramide.
본 발명에 있어서, 상기 “치료”는 목적하는 질병과 그에 따른 대사 이상 증세가 호전되거나 이롭게 변경되는 모든 행위를 의미하며, 화학 요법, 방사선 요법, 외과적 수술, 생물학적 요법, 또는 항생제 투여 등의 방법을 사용할 수 있다. 예컨대, 상기 치료는 수액처치, 약물, 혈장수혈, 및 식이조절 등을 통해 이루어질 수 있다. In the present invention, the "treatment" refers to all activities that improve or beneficially change the desired disease and metabolic abnormalities, and include methods such as chemotherapy, radiation therapy, surgical operation, biological therapy, or antibiotic administration. can be used. For example, the treatment may be performed through fluid treatment, drugs, plasma transfusion, and dietary control.
본 발명에 있어서, 상기 화학 요법(Chemotherapy)은 특정 질병의 치료를 위해 화학물질을 사용하는 행위와 그때 사용되는 약물 전체를 의미한다. 상기 약물의 예로는 항구토제, 위장 보호 약물, 항생제 등이 있으며, 더 구체적으로는 maropitant, ondansetron, Panoquell-CA1, 및 metoclopramide 등을 예로 들 수 있다. In the present invention, the chemotherapy (Chemotherapy) refers to the act of using a chemical substance for the treatment of a specific disease and the entire drug used at that time. Examples of the drug include antiemetics, gastroprotective drugs, antibiotics, and the like, and more specifically, maropitant, ondansetron, Panoquell-CA1, and metoclopramide.
본 발명에 있어서, 상기 외과적 수술은 치유, 치료 또는 진단 효과를 얻기 위해 개체의 신체에 대하여 손(hand) 혹은 기기와 함께 손의 방법적 작용을 포함하는 어떠한 치료상 또는 진단 처치를 모두 포함한다.In the present invention, the surgical operation includes any therapeutic or diagnostic procedure involving the methodical action of the hands or instruments in conjunction with the body of a subject to achieve a curative, therapeutic or diagnostic effect. .
본 발명에 있어서, 상기 생물학적 요법은 생물체에서 유래된 물질이나 생물체를 이용하여 생성시킨 물질을 함유한 생물학적 제제를 이용하여 직, 간접적으로 인체의 면역체계를 이용하는 치료법을 의미하며, 상기 생물학적 제제는 물리적, 화학적 시험만으로는 그 역가와 안정성을 평가할 수 없는 백신, 알레르겐, 항원, 호르몬, 사이토카인, 효소, 혈액 및 혈장, 면역 혈청, 단클론 항체, 발효 제품, 항독소, 및 실험실 진단제 등을 포함한다.In the present invention, the biological therapy refers to a treatment method that directly or indirectly uses the body's immune system using a biological agent containing a material derived from a living organism or a material produced using a living organism, and the biological agent is a physical , vaccines, allergens, antigens, hormones, cytokines, enzymes, blood and plasma, immune sera, monoclonal antibodies, fermented products, antitoxins, and laboratory diagnostics for which potency and safety cannot be assessed by chemical testing alone.
이하, 본 발명의 이해를 돕기 위하여 바람직한 실시예를 제시한다. 그러나 하기의 실시예는 본 발명을 보다 쉽게 이해하기 위하여 제공되는 것일 뿐, 하기 실시예에 의해 본 발명의 내용이 한정되는 것은 아니다.Hereinafter, a preferred embodiment is presented to aid understanding of the present invention. However, the following examples are provided to more easily understand the present invention, and the content of the present invention is not limited by the following examples.
[실시예][Example]
실시예 1. 반려견의 혈액 수집Example 1. Dog blood collection
수의사가 각 개체로부터 혈액을 채취하고 혈청분리 후 혈청을 별도의 tube에 채취하여 분석 전까지 -80℃에 보관하였다. 총 114두의 반려견으로부터 혈액 시료를 수집하였다. A veterinarian collected blood from each individual and after serum separation, the serum was collected in a separate tube and stored at -80 ° C until analysis. Blood samples were collected from a total of 114 dogs.
실시예 2. 반려견 혈액 시료의 전처리Example 2. Pretreatment of canine blood samples
고성능 액체 크로마토그래피 (High-performance liquid chromatography, HPLC)에 연결한 고농도 혈장 단백질 제거 컬럼 MARS14 컬럼 (100×4.6 mm; Agilent Technology, Palo Alto, CA, USA)을 이용하여 혈장 시료에서 14종의 고농도 (high abundant) 혈장 단백질을 제거하고 저농도 (low abundant) 단백질을 분리하였다. 분리된 저농도 단백질은 자동화된 액체 분주 시스템 (Bravo Automated Liquid Handling Platform; Agilent사)을 이용하여 펩티드를 제조하는 전처리 과정을 수행하였다 (도 1a). 14 high concentrations ( High abundant plasma proteins were removed and low abundant proteins were isolated. The isolated low-concentration protein was subjected to a pretreatment process for producing peptides using an automated liquid dispensing system (Bravo Automated Liquid Handling Platform; Agilent) (FIG. 1a).
즉, 40 μL의 혈장시료를 MARS14 컬럼에 주입하여 상위 14 개의 풍부한 단백질 (albumin, IgA, IgG, IgM, α1-antitrypsin, α1-acid glycoprotein, apolipoprotein A1, apolipoprotein A2, Complement C3, transferrin, α2-macroglobulin, transthyretin, haptoglobin, 및 fibrinogen)을 제거하였다 (도 1b). 이를 위해, 혼합물을 Agilent사의 buffer A (#5185-5987)로 4배 희석하고 Shimadzu HPLC LC20AT 시스템의 MARS14 컬럼에 로딩하였다. 결합되지 않은 저농도 혈장 단백질의 분획을 동결건조한 후, 재흡수하여 Suspension trap 방법을 이용해 펩티드로 제조했다 (도 1c). 5% SDS (50mM TEAB) 버퍼로 재흡수하여 10 mM이 되도록 1,4-디티오트레이톨 (1,4-Dithiothreitol)을 첨가하고 95℃에서 10분 동안 반응시켜 이황화결합을 환원시켰다. 그 후, 알킬화를 위해 20 mM이 되도록 아이오도아세트아미드 (iodoacetamide)를 첨가하여 암조건하에 실온에서 30분 동안 반응시키고, 6 μg의 트립신/라이스씨 혼합물로 37℃에서 18시간동안 분해시켰다. 용출된 페티드는 콜드 트랩 (CentriVap Cold Traps, LABCONCO)으로 동결 건조하고 사용할 때까지 영하 80℃에서 보관했다.That is, 40 μL of plasma sample was injected into the MARS14 column and the top 14 abundant proteins (albumin, IgA, IgG, IgM, α1-antitrypsin, α1-acid glycoprotein, apolipoprotein A1, apolipoprotein A2, Complement C3, transferrin, α2-macroglobulin , transthyretin, haptoglobin, and fibrinogen) were removed (Fig. 1b). To this end, the mixture was diluted 4-fold with Agilent's buffer A (#5185-5987) and loaded onto the MARS14 column of the Shimadzu HPLC LC20AT system. After freeze-drying the unbound low-concentration plasma protein fraction, it was reabsorbed and prepared as a peptide using the suspension trap method (FIG. 1c). The mixture was reabsorbed with 5% SDS (50 mM TEAB) buffer, 1,4-dithiothreitol was added to a concentration of 10 mM, and reacted at 95° C. for 10 minutes to reduce disulfide bonds. Thereafter, for alkylation, iodoacetamide was added to a concentration of 20 mM, reacted for 30 minutes at room temperature under dark conditions, and digested with 6 μg of a trypsin/rice seed mixture at 37° C. for 18 hours. The eluted petide was freeze-dried with a cold trap (CentriVap Cold Traps, LABCONCO) and stored at minus 80°C until use.
실시예 3. LC-MS 분석Example 3. LC-MS analysis
상기 실시예를 통해 확보된 펩티드들에 대해 SWATCH LC-MS 분석을 수행하였다. 이를 위해, 도 1d에 나타낸 파라미터를 이용하여 LC-MS 분석을 수행하여 스펙트럼을 확보했다. SWATCH LC-MS analysis was performed on the peptides obtained through the above examples. To this end, a spectrum was obtained by performing LC-MS analysis using the parameters shown in FIG. 1d.
구체적으로, 제조된 Peptide 시료에 iRT-Kit (Biognosys AG, Schlieren, Switzerland)에서 제공하는 iRT 표준을 1/10 부피로 샘플에 추가하여 공급 업체 지침 (참고논문: https://pubmed.ncbi.nlm.nih.gov/22577012/)에 따라 머무름 시간을 보정하였다. 각 샘플의 총량은 40 μg이며 40 μL의 용액에 용해시켰다. Specifically, the iRT standard provided by the iRT-Kit (Biognosys AG, Schlieren, Switzerland) was added to the prepared Peptide sample in 1/10 volume to the sample, following the supplier instructions (Reference: https://pubmed.ncbi.nlm Retention times were calibrated according to .nih.gov/22577012/). The total amount of each sample was 40 μg and was dissolved in 40 μL of solution.
주입된 4 μL의 샘플은 다음 LC-MS/MS 설정과 함께 SCIEX TripleTOF 5600+ 시스템 질량 분석기를 사용하여 분석하였다. LC 분리를 위해 nanoLC 425 (Eksigent, Dublin, CA, USA)를 Eksigent 마이크로 트랩 C18컬럼 (ChromXP C18CL, 5 μm, 120 Å)과 분석 컬럼으로서 Eksigent 컬럼 (C18-CL, 0.3 × 150 mm, 입자 크기 3 μm, 기공 크기 120 Å)을 함께 컬럼 온도가 40℃로 유지되도록 하고 샘플을 버퍼 A를 사용하여 10 μL/min의 유속으로 트랩 컬럼에 로딩하였다. 10분 후, 펩티드 혼합물은 버퍼 A와 버퍼 B (0.1 % formic acid in HPLC acetonitrile)를 사용하여 57분에 의해 5 μL/분으로 유속으로 농도구배를 통한 분리를 수행하였다. 버퍼 B를 38분 동안 3-25% 변경하고, 5분 동안 25-32% 변경하고, 2분 동안 32-80% 변경하고, 3분 동안, 80%로 유지하고, 3분 동안 80-3% 변경하고, 8분 동안 3%로 유지하였다. A 4 μL sample injected was analyzed using a SCIEX TripleTOF 5600+ system mass spectrometer with the following LC-MS/MS settings. For LC separation, a nanoLC 425 (Eksigent, Dublin, CA, USA) was used as an analytical column with an Eksigent Micro Trap C18 column (ChromXP C18CL, 5 μm, 120 Å) and an Eksigent column (C18-CL, 0.3 × 150 mm, particle size 3). μm, pore size 120 Å), the column temperature was maintained at 40° C. and the sample was loaded onto the trap column using buffer A at a flow rate of 10 μL/min. After 10 minutes, the peptide mixture was separated through a concentration gradient using buffer A and buffer B (0.1% formic acid in HPLC acetonitrile) at a flow rate of 5 μL/min by 57 minutes. Change Buffer B 3-25% for 38 min, 25-32% change for 5 min, 32-80% change for 2 min, hold at 80% for 3 min, 80-3% for 3 min and held at 3% for 8 minutes.
개별 샘플의 경우 모든 질량 분석 실행은 100개의 가변 창을 사용하여 모든 이론적 질량 스펙트럼 (SWATH) 모드의 순차 창 수집에서 작동시켜 수행했다. SWATH 매개 변수는 다음과 같이 설정하였다: Lower m/z limit 400; m/z 상한선 1250; 윈도우 오버랩 (Da) 1.0; CES는 작은 창에 대해 5, 큰 창에 대해 8, 가장 큰 창에 대해 10. MS2 스펙트럼은 고감도 모드에서 2.5ms 동안 100-1500m/z 범위에서 수집되었으며 총 사이클 시간은 2.8초였다. 다른 MS 파라미터는 다음과 같이 설정하였다: 이온 소스 가스 1 (GS1) 15 psi; 이온 소스 가스 2 (GS2) 20 psi; 커튼 가스 (CUR) 30 psi; 온도 (TEM) 250 °C; 이온 스프레이 전압 부동 (ISVF) 5500V.For individual samples, all mass spectrometry runs were performed using 100 variable windows and operating in sequential window acquisition in all theoretical mass spectra (SWATH) mode. The SWATH parameters were set as follows: Lower m/z limit 400; m/z upper limit 1250; Window overlap (Da) 1.0; The CES was 5 for the small window, 8 for the large window, and 10 for the largest window. MS2 spectra were collected in the range 100–1500 m/z for 2.5 ms in high-sensitivity mode, with a total cycle time of 2.8 seconds. Other MS parameters were set as follows: ion source gas 1 (GS1) 15 psi; ion source gas 2 (GS2) 20 psi; Curtain Gas (CUR) 30 psi; Temperature (TEM) 250 °C; Floating Ion Spray Voltage (ISVF) 5500V.
실시예 4. 통계 분석Example 4. Statistical analysis
상기 실시예를 통해 각 시료에 대해 SWATH LC-MS 분석을 수행하여 스펙트럼 (spectrum) 결과를 획득하고, DIA-NN software와 Pan-human proteome library를 이용하여 상기 스펙트럼들로부터 단백질들에 대한 정량적, 정성적 정보를 추출하였다. 정상대조군과 췌장염군의 시료별로 중간값 기반의 정규화된 단백질들의 양 정보를 로그 스케일 (Log scale)로 분석한 결과 재현성을 보이는 것을 확인하고 단백질들의 정량 정보를 이용하여 통계분석을 수행하였다.Through the above example, SWATH LC-MS analysis was performed on each sample to obtain a spectrum result, and quantitative and quantitative analysis of proteins from the spectra was performed using DIA-NN software and Pan-human proteome library. Sexual information was extracted. As a result of analyzing the amount information of normalized proteins based on the median value for each sample of the normal control group and the pancreatitis group on a log scale, it was confirmed that reproducibility was shown, and statistical analysis was performed using quantitative information of proteins.
[실험예][Experimental Example]
실험예 1. 혈액 시료의 채취Experimental Example 1. Collection of blood samples
동물병원에서 보호자 동의서를 받은 뒤, 수의사에 의해 혈액을 채취하고 혈청분리 후 혈청을 별도의 tube에 채취하여 분석 전까지 -80℃에 보관하였으며 총 116두의 반려견으로부터 혈액 시료를 수집하였다. 수집된 반려견들의 그룹 정보는 아래 표 1에 나타냈다.After receiving consent from the guardian at the veterinary hospital, blood was collected by the veterinarian, and after serum separation, the serum was collected in a separate tube and stored at -80 ° C until analysis, and blood samples were collected from a total of 116 companion dogs. The group information of the collected companion dogs is shown in Table 1 below.
그룹group number
피부질환skin disease 1One
비만 obesity 66
만성췌장염 chronic pancreatitis 1717
림포마lymphoma 1818
당뇨diabetes 44
급성췌장염acute pancreatitis 1919
과체중 overweight 22
건강 대조군health control group 3333
실험예 2. 혈장 시료로부터 분리한 단백질들의 총량 분석Experimental Example 2. Analysis of the total amount of proteins isolated from plasma samples
실시예 2에 따라 S-trap를 기반으로 trypsin/LysC로 116개의 혈장 시료들을 peptide로 제조하고, Nanodrop을 이용하여 펩티드의 양을 정량하였다 (도 2). 그 결과, 최고 1,023 μg에서 최소 214 μg의 펩티드가 수득되었음을 확인하였다. 통상적으로 단백질 분석시 8 μg 정도의 펩티드만 분석하는 것을 감안하면, 연구에 충분한 양의 펩티드가 제조되었음을 알 수 있었다.According to Example 2, based on S-trap, 116 plasma samples were prepared as peptides with trypsin/LysC, and the amount of peptides was quantified using Nanodrop (FIG. 2). As a result, it was confirmed that a minimum of 214 μg of peptide was obtained at a maximum of 1,023 μg. Considering that only about 8 μg of peptide is usually analyzed during protein analysis, it was found that a sufficient amount of peptide was prepared for the study.
실험예 3. 정상 그룹 대비 췌장염 개체에서 차별적인 수준을 보이는 단백질들의 선별Experimental Example 3. Selection of proteins showing differential levels in pancreatitis individuals compared to normal groups
반려견들의 혈장으로부터 분리한 펩티드 시료들에 대해 Sciex사의 Quadupole Time of Flight (Q-TOF) mass spectrometry를 수행하여 Data-independent acquisition (DIA) 방식으로 스펙트럼을 확보하였다. 확보된 스펙트럼은, 기확보된 개의 pooling된 단백질 시료들로부터 Data dependent acqusition (DDA) 방식으로 확보한 스펙트럼 라이브러리를 활용하여 비교분석하였으며, DIA-NN 알고리즘으로 단백질의 정성 및 정량적 정보를 추출하였다. Sciex's Quadupole Time of Flight (Q-TOF) mass spectrometry was performed on the peptide samples isolated from the plasma of dogs, and the spectrum was obtained by Data-independent acquisition (DIA) method. The obtained spectrum was compared and analyzed using a spectrum library obtained by Data Dependent Acquisition (DDA) method from pooled protein samples of previously secured dogs, and qualitative and quantitative information of the protein was extracted with the DIA-NN algorithm.
SWATH LC-MS 분석 결과 116개 시료에서 총 701개의 단백질들을 정량분석할 수 있었으며, 시료별 정량 가능한 단백질들의 수는 도 3에 나타냈다. 정량된 단백질의 수는 그룹별로 차이가 없었으며 missing value가 있는 경우 80%의 frequency를 기준으로 random normal distribution으로 imputation 하여 분석을 진행하였다. As a result of SWATH LC-MS analysis, a total of 701 proteins could be quantitatively analyzed in 116 samples, and the number of quantifiable proteins for each sample is shown in FIG. 3 . There was no difference in the number of quantified proteins by group, and if there was a missing value, the analysis was performed by imputation with a random normal distribution based on 80% frequency.
정상대조군 대비 췌장염 혈액에서 차별적으로 존재하는 단백질들 (Diffrentially expressed proteins, DEPs)은 총 16개로 나타났으며, 정상 대조군 대비 췌장염 혈액 혈장에서 증가한 단백질들은 총 3개, 감소한 단백질들은 13개로 확인됐다 (도 4). 16개 DEP들에 대한 p value와 fold change는 도 5에 나타냈다. 이 중 Pentaxin은 C-Reactive protein으로, 본 발명자들이 림프종에서도 동일하게 증가하는 바이오마커로 확인한 바 있는 단백질이다. 또한, CRP 및 SERPINA3는 림프종에서의 DEP에서도 확인된 단백질이다. 이외에도, PEPD를 포함한 10개의 단백질들이 질환군에서 공통적으로 감소되어 있는 것으로 확인되었다.A total of 16 proteins (Differentially expressed proteins, DEPs) were found in the pancreatitis blood compared to the normal control group, and a total of 3 proteins were increased and 13 proteins were decreased in the pancreatitis blood plasma compared to the normal control group (Fig. 4). The p value and fold change for 16 DEPs are shown in FIG. 5 . Among them, Pentaxin is a C-Reactive protein, which the present inventors have identified as a biomarker that is equally increased in lymphoma. CRP and SERPINA3 are also proteins identified in DEP in lymphoma. In addition, it was confirmed that 10 proteins, including PEPD, were commonly reduced in disease groups.
상기 단백질들은 림프종 및 췌장염에서 공통적으로 발현 변화를 보이는 DEP이므로 질환 특이도가 낮을 수 있으나, 고위험 질환군에 대한 범용적 바이오마커로 활용될 수 있는 이점이 있다.Since these proteins are DEPs that commonly show expression changes in lymphoma and pancreatitis, disease specificity may be low, but they have the advantage of being used as universal biomarkers for high-risk disease groups.
실험예 4. 반려견의 췌장염 진단을 위한 단백질 마커 조합의 선별Experimental Example 4. Screening of Protein Marker Combinations for Diagnosis of Canine Pancreatitis
정상 그룹 대비 췌장염 그룹에서 차별적인 수준을 보이는 16개 DEP 중 SERPINA3 (Serpin family A member 3) 및 Angiotensinogen은 모두 췌장염에서 증가한 단백질이다. SEPINAA3는 특이도 78.1%, 민감도 81.8%를 나타냈으며 ROC AUC는 0.857로 우수한 변별력을 가지는 것으로 나타났다 (도 6a). 또한 Angiotensinogen은 민감도 78.8%, 특이도 87.5%였으며 ROC AUC는 0.848로, 마찬가지로 질환 변별력이 우수한 것이 확인됐다 (도 6b).Among the 16 DEPs showing differential levels in the pancreatitis group compared to the normal group, SERPINA3 (Serpin family A member 3) and Angiotensinogen are both proteins that are increased in pancreatitis. SEPINAA3 showed a specificity of 78.1% and a sensitivity of 81.8%, and ROC AUC was 0.857, indicating excellent discrimination power (FIG. 6a). In addition, angiotensinogen had a sensitivity of 78.8% and a specificity of 87.5%, and the ROC AUC was 0.848, confirming that the disease discrimination power was similarly excellent (FIG. 6b).
또한, 상기 실험예에서 확인된 15개의 상위 DEP을 이용한 PLS-DA 결과 췌장염 그룹 (급성 및 만성) 과 정상 대조군 그룹은 단백질들의 정량적 특징을 이용하여 서로 구별될 수 있는 개연성을 가지는 것으로 확인되었다 (도 7). 도 7의 우축 그래프에 Angiotensinogen을 의미하는 F1PAL5가 표기되어 있다. In addition, as a result of PLS-DA using the 15 top DEPs identified in the above experimental example, it was confirmed that the pancreatitis group (acute and chronic) and the normal control group have a probability that they can be distinguished from each other using quantitative characteristics of proteins (Fig. 7). F1PAL5, which means angiotensinogen, is marked on the right-axis graph of FIG. 7 .
실험예 5. 반려견의 급성 또는 만성 췌장염 진단을 위한 마커 선별Experimental Example 5. Marker selection for diagnosis of acute or chronic pancreatitis in dogs
정상대조군과 급성 췌장염, 만성 췌장염을 구분할 수 있는 DEP를 도출하기 위해 Kruskal Wallis test를 수행하였으며, 그 결과 23개의 DEP들을 도출할 수 있었다 (도 8).A Kruskal Wallis test was performed to derive DEPs capable of distinguishing the normal control group from acute pancreatitis and chronic pancreatitis, and as a result, 23 DEPs could be derived (FIG. 8).
도출된 23개 단백질들 중에서 Angiotensinogen은 만성 췌장염 및 급성 췌장염 공통적으로 증가하는 것으로 나타났으며, SERPINA3는 정상, 만성, 및 급성으로 갈수록 수준이 더욱 증가하는 정량적 특성을 나타내었다. 또한 PDE4DIP는 정상 그룹에서 수준이 높고, 만성 및 급성 췌장염 그룹에서 감소하는 특징을 보였다 (도 9). 즉, 상기 단백질들의 정량적 특징을 이용하여 만성 췌장염과 급성 췌장염을 구분하는 panel을 개발할 수 있음을 확인하였다. Among the 23 proteins derived, angiotensinogen was found to be increased in both chronic pancreatitis and acute pancreatitis, and SERPINA3 showed quantitative characteristics with a higher level in normal, chronic, and acute stages. In addition, PDE4DIP was high in the normal group and decreased in the chronic and acute pancreatitis groups (FIG. 9). That is, it was confirmed that a panel for distinguishing chronic pancreatitis from acute pancreatitis could be developed using the quantitative characteristics of the proteins.
Logistic regression을 이용하여 DEP 중 2가지 이상의 단백질들의 조합을 이용하여 진단 정확도를 분석한 결과, PDE4DIP (phosphodiesterase 4D interacting protein), FGG 및 SERPINA3 단백질들이 조합되었을 때 민감도는 97.0%, 특이도는 84.4%로 나타났으며 ROC AUC는 0.951로 매우 우수한 변별력을 가지는 것으로 나타났다 (도 10). 질병을 구분하는 기준인 민감도가 중요하다는 관점에서, 상기 바이오마커의 조합은 기존의 췌장염 진단의 민감도와 특이도인 82%, 59%에 비교하여 매우 우수한 변별력을 가지는 것을 알 수 있다. As a result of analyzing the diagnostic accuracy using a combination of two or more proteins among DEPs using logistic regression, when PDE4DIP (phosphodiesterase 4D interacting protein), FGG and SERPINA3 proteins were combined, the sensitivity was 97.0% and the specificity was 84.4%. and the ROC AUC was 0.951, which was found to have very good discrimination power (FIG. 10). In view of the importance of sensitivity, which is a criterion for classifying diseases, it can be seen that the biomarker combination has very good discrimination compared to 82% and 59%, which are the sensitivity and specificity of conventional pancreatitis diagnosis.
전술한 본 발명의 설명은 예시를 위한 것이며, 본 발명이 속하는 기술분야의 통상의 지식을 가진 자는 본 발명의 기술적 사상이나 필수적인 특징을 변경하지 않고서 다른 구체적인 형태로 쉽게 변형이 가능하다는 것을 이해할 수 있을 것이다. 그러므로 이상에서 기술한 실시예들은 모든 면에서 예시적인 것이며 한정적이 아닌 것으로 이해해야 한다. The above description of the present invention is for illustrative purposes, and those skilled in the art can understand that it can be easily modified into other specific forms without changing the technical spirit or essential features of the present invention. will be. Therefore, it should be understood that the embodiments described above are illustrative in all respects and not restrictive.
본 발명은 개의 췌장염 진단을 위한 조성물 등에 관한 것으로서, 개의 혈장 단백질에 대한 정성적, 정량적 분석을 통해 높은 정확도와 민감도로 췌장염을 진단할 수 있는 바이오마커를 발굴하여 완성된 것이다. 구체적으로, 본 발명자들은 췌장염을 앓고 있는 개의 혈장 단백질에 대해 고분해능 질량분석기를 이용한 단백체 분석을 수행하였으며, 정상 대조군과 비교하여 유의한 발현 차이를 보이는 바이오마커들을 선별하였다. 선별된 바이오마커를 이용하여 확립한 췌장염 진단 모델은 높은 특이도, 민감도, 및 정확도로 췌장염을 진단할 수 있음이 확인되었다. 따라서 본 발명은 소량의 혈액을 이용한 비침습적 방법으로서 반려견의 췌장염 위험도 예측 및 조기 진단을 가능케하는 바, 반려견의 건강을 보존하고 보호자의 의료비 부담을 절감할 뿐만 아니라, 수의학적 컨설팅의 질적 향상에도 기여할 것으로 기대된다.The present invention relates to a composition for diagnosing canine pancreatitis, and was completed by discovering a biomarker capable of diagnosing pancreatitis with high accuracy and sensitivity through qualitative and quantitative analysis of canine plasma proteins. Specifically, the present inventors performed proteomic analysis using high-resolution mass spectrometry on plasma proteins of dogs suffering from pancreatitis, and selected biomarkers showing significant expression differences compared to normal controls. It was confirmed that the pancreatitis diagnostic model established using the selected biomarker can diagnose pancreatitis with high specificity, sensitivity, and accuracy. Therefore, the present invention is a non-invasive method using a small amount of blood, which enables prediction and early diagnosis of the risk of pancreatitis in dogs, thereby preserving the health of dogs, reducing the burden of guardians' medical expenses, and contributing to the improvement of the quality of veterinary consulting. It is expected that

Claims (15)

  1. PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG (Fibrinogen gamma chain)으로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제를 유효성분으로 포함하는, 개의 췌장염 진단용 조성물.A composition for diagnosing pancreatitis in dogs, comprising, as an active ingredient, an agent for measuring the level of at least one protein or mRNA selected from the group consisting of PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), and FGG (Fibrinogen gamma chain) .
  2. 제1항에 있어서,According to claim 1,
    상기 SERPINA3의 단백질 또는 mRNA 수준은 정상 개체 대비 췌장염 개체에서 증가되어 있는 것을 특징으로 하는, 개의 췌장염 진단용 조성물.The composition for diagnosing canine pancreatitis, characterized in that the protein or mRNA level of SERPINA3 is increased in pancreatitis subjects compared to normal subjects.
  3. 제1항에 있어서,According to claim 1,
    상기 PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준은 정상 개체 대비 췌장염 개체에서 감소되어 있는 것을 특징으로 하는, 개의 췌장염 진단용 조성물.The composition for diagnosing canine pancreatitis, characterized in that the protein or mRNA level of PDE4DIP or FGG is reduced in pancreatitis subjects compared to normal subjects.
  4. 제1항에 있어서,According to claim 1,
    상기 조성물은 Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), 및 Complement factor I로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA의 수준을 측정하는 제제를 더 포함하는 것을 특징으로 하는, 개의 췌장염 진단용 조성물.The composition includes Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), and Complement A composition for diagnosing canine pancreatitis, further comprising an agent for measuring the level of at least one protein or mRNA selected from the group consisting of factor I.
  5. 제1항에 있어서,According to claim 1,
    상기 단백질 수준을 측정하는 제제는 상기 단백질에 특이적인 항체 또는 앱타머인 것을 특징으로 하는, 개의 췌장염 진단용 조성물.The composition for diagnosing canine pancreatitis, characterized in that the agent for measuring the protein level is an antibody or an aptamer specific to the protein.
  6. 제1항에 있어서,According to claim 1,
    상기 mRNA 발현 수준을 측정하는 제제는 상기 mRNA에 특이적으로 결합하는 프라이머 세트 또는 프로브인 것을 특징으로 하는, 개의 췌장염 진단용 조성물.The composition for diagnosing canine pancreatitis, characterized in that the agent for measuring the mRNA expression level is a primer set or a probe that specifically binds to the mRNA.
  7. 제1항에 있어서,According to claim 1,
    상기 단백질 또는 mRNA 수준은 혈액, 전혈, 혈장, 혈청, 및 림프액으로 이루어진 군에서 선택된 하나 이상에서의 수준인, 개의 췌장염 진단용 조성물.The protein or mRNA level is a level in at least one selected from the group consisting of blood, whole blood, plasma, serum, and lymph, composition for diagnosing canine pancreatitis.
  8. 제1항 내지 제7항 중 어느 한 항의 조성물을 포함하는, 개의 췌장염 진단용 키트.A kit for diagnosing canine pancreatitis, comprising the composition of any one of claims 1 to 7.
  9. 하기 단계를 포함하는, 개의 췌장염 진단 방법:A method for diagnosing pancreatitis in dogs, comprising the following steps:
    (S1) 피검체로부터 분리된 생물학적 시료에서 PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 단계; 및(S1) measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and FGG in a biological sample isolated from the subject; and
    (S2) 상기 단계 (S1)에서 측정된 SERPINA3의 단백질 또는 mRNA 수준이 대조군에 비해 증가하거나; PDE4DIP 또는 FGG의 단백질 또는 mRNA 수준이 대조군에 비해 감소한 경우, 췌장염으로 진단하거나 췌장염이 발병할 위험이 있는 것으로 판단하는 단계.(S2) the protein or mRNA level of SERPINA3 measured in step (S1) is increased compared to the control group; Diagnosing pancreatitis or determining that there is a risk of developing pancreatitis when the protein or mRNA level of PDE4DIP or FGG is reduced compared to the control group.
  10. 제9항에 있어서,According to claim 9,
    상기 방법은 상기 피검체로부터 분리된 생물학적 시료에서 Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B), Complement C3 (LOC484960), 및 Complement factor I로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA의 수준을 측정하는 단계를 더 포함하는 것인, 개의 췌장염 진단 방법.The method includes Pentaxin, Angiotensinogen, Peptidase D, Transferrin (TF), Complement C7, Coagulation factor X, Kallikrein B1, Factor XI, Complement C8 alpha chain, Coagulation factor XIII B chain (F13B) in a biological sample isolated from the subject. , Complement C3 (LOC484960), and Complement factor I, further comprising measuring the level of at least one protein or mRNA selected from the group consisting of, the method for diagnosing canine pancreatitis.
  11. 제9항에 있어서,According to claim 9,
    상기 생물학적 시료는 혈액, 전혈, 혈장, 혈청, 및 림프액으로 이루어진 군에서 선택된 하나 이상인, 개의 췌장염 진단 방법.The method of diagnosing canine pancreatitis, wherein the biological sample is at least one selected from the group consisting of blood, whole blood, plasma, serum, and lymph.
  12. 제9항에 있어서,According to claim 9,
    상기 단백질 수준은 단백질 칩 분석, 면역 측정법, 리간드 바인딩 어세이, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) 분석, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) 분석, 방사선 면역 분석, 방사 면역 확산법, 오우크테로니 면역 확산법, 로케트 면역전기영동, 조직면역 염색, 보체 고정 분석법, 2차원 전기영동 분석, 액상 크로마토그래피-질량분석 (liquid chromatography-Mass Spectrometry; LC-MS), LC-MS/MS (liquid chromatography-Mass Spectrometry/ Mass Spectrometry), 웨스턴 블랏팅, ELISA (enzyme linked immunosorbentassay), 및 FACS으로 이루어진 군으로부터 선택된 하나 이상의 방법으로 측정되는 것을 특징으로 하는, 개의 췌장염 진단 방법.The protein level is measured by protein chip analysis, immunoassay, ligand binding assay, MALDI-TOF (Matrix Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry) analysis, SELDI-TOF (Sulface Enhanced Laser Desorption/Ionization Time of Flight Mass Spectrometry) assay, radioimmunoassay, radioimmuno-diffusion method, Oucteroni immunodiffusion method, rocket immunoelectrophoresis, tissue immunostaining, complement fixation assay, two-dimensional electrophoretic assay, liquid chromatography-Mass Spectrometry (LC) -MS), LC-MS / MS (liquid chromatography-Mass Spectrometry / Mass Spectrometry), Western blotting, ELISA (enzyme linked immunosorbentassay), and FACS, characterized in that measured by one or more methods selected from the group consisting of, How to diagnose pancreatitis.
  13. 제9항에 있어서,According to claim 9,
    상기 mRNA 수준은 PCR, RNase 보호 분석법, 노던 블랏팅 (northern blotting), 서던 블랏팅 (southern blotting), In situ 교잡법, DNA 칩, 및 RNA 칩으로 이루어진 군으로부터 선택된 하나 이상의 방법으로 측정되는 것을 특징으로 하는, 개의 췌장염 진단 방법.The mRNA level is measured by one or more methods selected from the group consisting of PCR, RNase protection assay, northern blotting, southern blotting, in situ hybridization, DNA chip, and RNA chip. A method for diagnosing canine pancreatitis.
  14. 개의 췌장염 진단을 위한, PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG (Fibrinogen gamma chain)으로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제의 용도.Use of an agent for measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and Fibrinogen gamma chain (FGG) for diagnosis of canine pancreatitis.
  15. 개의 췌장염 진단용 제제의 제조를 위한, PDE4DIP (phosphodiesterase 4D interacting protein), SERPINA3 (Serpin family A member 3), 및 FGG (Fibrinogen gamma chain)으로 이루어진 군에서 선택된 하나 이상의 단백질 또는 mRNA 수준을 측정하는 제제의 용도.Use of a preparation for measuring the level of at least one protein or mRNA selected from the group consisting of phosphodiesterase 4D interacting protein (PDE4DIP), Serpin family A member 3 (SERPINA3), and Fibrinogen gamma chain (FGG) for the manufacture of a preparation for diagnosis of canine pancreatitis .
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