WO2023092314A1 - Humanized antibody binding to bp specific antigen peptide, preparation method, and use - Google Patents

Humanized antibody binding to bp specific antigen peptide, preparation method, and use Download PDF

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WO2023092314A1
WO2023092314A1 PCT/CN2021/132667 CN2021132667W WO2023092314A1 WO 2023092314 A1 WO2023092314 A1 WO 2023092314A1 CN 2021132667 W CN2021132667 W CN 2021132667W WO 2023092314 A1 WO2023092314 A1 WO 2023092314A1
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seq
antibody
amino acid
sequence shown
antigen
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PCT/CN2021/132667
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French (fr)
Chinese (zh)
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王雅楠
杨衡
冯素英
陈春峰
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苏州方科生物科技有限公司
苏州系统医学研究所
中国医学科学院皮肤病医院(中国医学科学院皮肤病研究所)
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Priority to PCT/CN2021/132667 priority Critical patent/WO2023092314A1/en
Publication of WO2023092314A1 publication Critical patent/WO2023092314A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/08Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
    • C07K16/10Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/395Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum
    • A61K39/42Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum viral
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/577Immunoassay; Biospecific binding assay; Materials therefor involving monoclonal antibodies binding reaction mechanisms characterised by the use of monoclonal antibodies; monoclonal antibodies per se are classified with their corresponding antigens

Definitions

  • the disclosure belongs to the field of biomedicine, and relates to a human antibody that binds to a BP-specific antigen peptide, a preparation method and an application. Specifically, the present disclosure relates to a monoclonal antibody that specifically binds to the NC16A domain of the BP180 antigenic protein, a method for preparing the monoclonal antibody, and the use of the aforementioned monoclonal antibody in preparing, diagnosing, preventing, or treating bullous Use in medicine for pemphigus.
  • BP Bullous Pemphigoid
  • HE hematoxylin and eosin staining
  • DIF direct immunofluorescence
  • ssIIF salt Split indirect immunofluorescence
  • the target antigens of autoantibodies in the serum of BP patients are BP180 and BP230, also known as BPAG1 and BPAG2, and the molecular weights of these two antigens are 180KD and 230KD, respectively.
  • BP180 is considered a direct target of autoantibodies.
  • BP180 is a type II transmembrane protein with a cytoplasmic NH2 terminus and an extracellular COOH domain.
  • the N-terminal domain, transmembrane stretch and extracellular C-terminus have 466, 23 and 1008 amino acids, respectively.
  • the extracellular domain contains 15 collagen subdomains (COL1–COL15) interspersed with 16 noncollagenous sequences (NC1–NC16).
  • the NC16A domain is the paramembrane junction region, which is the core of collagen-like triple helix formation.
  • the extracellular domain contains a helical structure that is physiologically shed from the cell surface by disintegrin metalloproteinases (ADAMs).
  • the NC16A domain has seven antigenic sites, including NC16A1(aa 490-506), NC16A1-3(aa 490-534), NC16A1-5(aa 490-562), NC16A2(aa 507-520), NC16A2.5 (aa 514-532), NC16A3 (aa 521-534), and NC16A3-4 (aa 522-545).
  • NC16A2 and NC16A2.5 are the main antigenic sites that can be captured by all IgG and IgE antibodies.
  • BP180-NC16A antibody titers have been reported to correlate with disease severity in BP patients.
  • Replacing mouse BP180-NC14A with the homologous human BP180-NC16A cluster region and injecting mice with intact IgG or affinity-purified IgG antibodies against BP180-NC16A from BP patients showed increased skin fragility.
  • the structure and localization of BP180 indicated that it is the core anchor protein connecting extracellular and extracellular hemidosomal proteins and plays a key role in the pathogenesis of BP.
  • the NC16A domain of BP180 is considered to be the main pathogenic epitope of BP. Therefore, identifying the target region of BP180 is of great significance for understanding the pathogenesis and clinical characteristics of BP180.
  • BP is a spectrum disease. Although most patients can achieve clinical remission after treatment, there is still a considerable mortality rate in elderly patients, especially in patients over 80 years old. The mortality rate can reach 25%. In addition, the development of immunotherapy in cancer patients can also lead to the occurrence of BP disease. PD-1/PD-L1 checkpoint inhibitors are mostly used to treat various solid and hematological malignancies, and are a class of drugs that induce BP that have been reported more in recent years. Vesicles or bullae occurred within 6-8 months after starting PD-1/PD-L1 inhibitor therapy in most cases, and mucosal involvement occurred in a few cases. With the popularization of PD-1 immunotherapy, the demand for BP detection will increase in the future. At present, how to quickly and accurately diagnose such diseases lacks effective detection methods.
  • IgG is a kind of BP pathogenic autoantibody, and its target antigen is mainly BP180.
  • the combination of BP-IgG and BP180 activates complement, induces the internalization of antigenic peptides, and weakens the adhesion between keratinocytes and basement membrane.
  • the serum level of heat shock protein 90 (HSP90) in BP patients is inversely proportional to the BP180-NC16A IgG antibody, that is, the anti-BP180-NC16A IgG antibody indirectly enhances the expression of intracellular HSP90 through the inflammatory response generated by soluble inflammatory chemotactic mediators, and at the same time Inhibit the release of HSP90 from cells to peripheral blood.
  • HSP90 The abnormally high expression of HSP90 in the cells releases related chemokines to infiltrate inflammatory cells such as eosinophils and neutrophils, and releases some proteolytic enzymes and various inflammatory mediators to participate in the pathological changes of BP and the formation of blisters .
  • the diagnostic criteria for BP include clinical manifestations, histopathology, direct immunofluorescence, indirect immunofluorescence, and specific antibody tests.
  • Different treatment options are adopted according to the severity of the disease, mainly relying on glucocorticoids, antibiotics, and immunosuppressants.
  • glucocorticoids are recognized as the first-line drug for the treatment of BP, with remarkable clinical efficacy, but long-term use can cause a large number of complications, and some serious complications even hinder the clinical use of this drug in some patients. Therefore, it is necessary to provide a reagent for the diagnosis or treatment of bullous pemphigoid.
  • Phage display technology was first established by Smith in 1985. After more than 30 years of development and improvement, it has been widely used in the establishment of antigen antibody library, drug design, vaccine research, pathogen detection, gene therapy, epitope research and cell Signal transduction research, etc.
  • Phage antibody library technology is to screen and enrich specific antibodies by preparing a human antibody library (library) and expressing proteins or polypeptides on the surface of phages.
  • the present disclosure screens out a humanized monoclonal antibody against bullous pemphigoid antigen BP180.
  • the present disclosure provides an isolated anti-BP180 antibody or an antigen-binding fragment thereof, which comprises a heavy chain variable region, wherein the sequence encoding the heavy chain variable region comprises one of the sequences shown below or Various:
  • the heavy chain variable region is encoded according to the analysis method of IMGT.
  • the antibody or antigen-binding fragment thereof according to the present disclosure comprises a light chain variable region, wherein the sequence encoding the light chain variable region comprises one or more of the sequences shown below kind:
  • the light chain variable region is encoded according to the analysis method of IMGT.
  • an antibody or antigen-binding fragment thereof comprising a heavy chain variable region (VH) and a light chain variable region (VL), the light chain variable region (VL) comprising VL complementarity determining region (CDR) 1, VL complementarity determining region (CDR) 2 and VL complementarity determining region (CDR) 3, the heavy chain variable region (VH) comprises VH complementarity determining region (CDR) 1, VH complementarity determining region region (CDR) 2 and VH complementarity determining region (CDR) 3; and,
  • VLCDR1 comprises the amino acid sequence shown in SEQ ID NO: 3
  • VLCDR2 comprises the amino acid sequence shown in SEQ ID NO: 7
  • VLCDR3 comprises the amino acid sequence shown in SEQ ID NO: 11;
  • VHCDR1 contains the amino acid sequence shown in SEQ ID NO: 4
  • VHCDR2 contains the amino acid sequence shown in SEQ ID NO: 8
  • VHCDR3 contains the amino acid sequence shown in SEQ ID NO: 12.
  • the antibody or antigen-binding fragment thereof according to the present disclosure wherein the encoding of the antibody or antigen-binding fragment thereof comprises one or more of the following sequences:
  • VH comprises the amino acid sequence shown in SEQ ID NO: 16
  • VL comprises the amino acid sequence shown in SEQ ID NO: 18;
  • the present disclosure provides a polynucleotide, wherein the polynucleotide is selected from any one of (a)-(d):
  • nucleotide sequence comprising the reverse complement of the nucleotide sequence shown in any one of SEQ ID NO: 15, SEQ ID NO: 17 or a combination thereof;
  • (d) has at least 90%, optionally at least 95%, preferably at least 97%, more preferably at least 98%, most preferably at least 99% of the nucleotide sequence shown in any one of (a)-(c) sequence of sequence identity.
  • the present disclosure provides a vector, wherein the vector comprises the polynucleotide according to the second aspect.
  • the present disclosure provides an isolated host cell, wherein the host cell comprises the vector as described in the third aspect.
  • the present disclosure provides a method for preparing a host cell stably expressing a target protein, wherein the method comprises the step of transforming the initial host cell with the vector described in the third aspect.
  • the present disclosure provides a method for preparing a target protein, the method comprising preparing the target protein by using the host cell described in the fourth aspect or by the method described in the fifth aspect.
  • the present disclosure provides an antibody or binding fragment thereof prepared according to the method of the fifth aspect.
  • the present disclosure provides a method for detecting an anti-BP180 antibody, wherein the method includes the step of using the antibody or antigen-binding fragment thereof described in the first aspect or the seventh aspect to detect the sample to be tested;
  • the method includes the step of quantifying the anti-BP180 antibody in the sample to be tested.
  • the present disclosure provides a kit, wherein the kit comprises the antibody or antigen-binding fragment thereof according to the first aspect or the seventh aspect.
  • the present disclosure provides a composition, wherein the composition contains the antibody or antigen-binding fragment thereof according to the first or seventh aspect.
  • the present disclosure provides the antibody or antigen-binding fragment thereof according to the first aspect or the seventh aspect, or the composition described in the tenth aspect in at least one of the following (1)-(4) use:
  • the present disclosure provides a method for preventing or treating bullous pemphigoid, wherein the antibody or antigen-binding fragment thereof according to the first aspect or the seventh aspect is used, or according to the tenth aspect
  • the composition is administered to a subject.
  • the present disclosure screens out a humanized monoclonal antibody against bullous pemphigoid antigen BP180.
  • the antibody By binding to BP180, the antibody has high activity, good stability, and strong specificity. It can be used as a reference standard for qualitative detection of BP180 positivity, and can quantitatively detect the level of anti-BP180NC16A autoantibodies in BP patients, thereby monitoring disease activity. It can be used for clinical diagnosis and treatment of BP patients.
  • Fig. 1 shows the PCR agarose gel electrophoresis pattern of the monoclonal bacteria of the VL phage library, which corresponds to the VL phage library constructed in the present disclosure.
  • lane M is DL2000
  • lanes 1-16 are pATA-VK
  • lanes 17-32 are pATA-V ⁇ .
  • Figure 2 shows the PCR agarose gel electrophoresis image of the monoclonal KH phage library, which corresponds to the KH phage library constructed in the present disclosure.
  • lane M is DL2000
  • lanes 1-48 are pATA-scFv-KH respectively.
  • Fig. 3 shows the PCR agarose gel electrophoresis image of the monoclonal phage library of ⁇ H, which corresponds to the phage library of ⁇ H constructed in the present disclosure.
  • lane M is DL2000
  • lanes 1-48 are pATA-scFv- ⁇ H, respectively.
  • Figure 4 shows the results of monoclonal sequencing analysis of the phage display library. Among them, the left picture is the light chain analysis result of the library sequence, and the right picture is the heavy chain analysis result of the library sequence.
  • Figure 5 shows the SDS-PAGE electrophoresis of the target protein BP180. According to the results of the aforementioned electrophoresis diagram, the protein size is 34KDa, and the purity is greater than 90%.
  • Fig. 6 shows the ELISA results of 76F-GST-NC16A-R2P1-H2 antibody diluted at different concentrations.
  • Bullous Pemphigoid (Bullous Pemphigoid, BP) is generally considered to be an autoimmune disease. Most patients have anti-basilar membrane zone autoantibodies in their serum, and the combination of antigen and antibody leads to basal Damage to the membranous bands forms blisters.
  • mammals include, but are not limited to, domesticated animals (e.g., cattle, sheep, cats, dogs, and horses), primates (e.g., humans and non-human primates such as monkeys), rabbits, and rodents (e.g., , mice and rats).
  • domesticated animals e.g., cattle, sheep, cats, dogs, and horses
  • primates e.g., humans and non-human primates such as monkeys
  • rabbits e.g., mice and rats.
  • BP180 antigen As used in this disclosure, the term "BP180 antigen” (abbreviated as BP180) is also called BPAG1 antigen, and its molecular weight is 180KD, respectively. BP180 is considered a direct target of autoantibodies. BP180 is a type II transmembrane protein with a cytoplasmic NH2 terminus and an extracellular COOH domain. The N-terminal domain, transmembrane stretch and extracellular C-terminus have 466, 23 and 1008 amino acids, respectively. The extracellular domain contains 15 collagen subdomains (COL1–COL15) interspersed with 16 noncollagenous sequences (NC1–NC16).
  • conservative mutation refers to a mutation (eg, amino acid substitution, insertion and/or deletion) that can normally maintain the function of a protein.
  • conservative mutations are conservative substitutions.
  • substitutions generally exchange one amino acid at one or more positions in a protein. Such substitutions may be conservative. Specific examples of substitutions considered conservative substitutions include substitution of Ala to Ser or Thr, substitution of Arg to Gln, His, or Lys, substitution of Asn to Glu, Gln, Lys, His, or Asp, substitution of Asp to Asn, Glu or Gln substitution, Cys to Ser or Ala substitution, Gln to Asn, Glu, Lys, His, Asp or Arg substitution, Glu to Gly, Asn, Gln, Lys or Asp substitution, Gly to Pro substitution Substitution, His to Asn, Lys, Gln, Arg or Tyr, Ile to Leu, Met, Val or Phe, Leu to Ile, Met, Val or Phe, Lys to Asn, Glu, Gln, His or Substitution of Arg, substitution of Met to Ile, Leu, Val or Phe, substitution of Phe to Trp, Tyr,
  • Sequence identity and “percent identity” in the present disclosure refer to the percentage of nucleotides or amino acids that are identical (ie identical) between two or more polynucleotides or polypeptides. Sequence identity between two or more polynucleotides or polypeptides can be determined by aligning the nucleotide or amino acid sequences of the polynucleotides or polypeptides and comparing the sequence identity in the aligned polynucleotides or polypeptides. The number of positions containing the same nucleotide or amino acid residue is scored and compared to the number of positions in the aligned polynucleotide or polypeptide containing a different nucleotide or amino acid residue.
  • Polynucleotides may differ at one position, for example, by containing different nucleotides (ie substitutions or mutations) or missing nucleotides (ie nucleotide insertions or nucleotide deletions in one or both polynucleotides).
  • Polypeptides may differ at one position, for example, by containing different amino acids (ie, substitutions or mutations) or missing amino acids (ie, amino acid insertions or amino acid deletions in one or both polypeptides). Sequence identity can be calculated by dividing the number of positions containing the same nucleotide or amino acid residue by the total number of amino acid residues in the polynucleotide or polypeptide.
  • Percent identity can be calculated, for example, by dividing the number of positions containing the same nucleotide or amino acid residue by the total number of nucleotides or amino acid residues in the polynucleotide or polypeptide and multiplying by 100.
  • phage display technology in this disclosure is to insert the DNA sequence of foreign protein or polypeptide into the appropriate position of the phage coat protein structural gene, so that the foreign gene is expressed along with the expression of the coat protein, and at the same time, the foreign protein is Phage reassembly and display on the surface of phage biotechnology.
  • antibody in this disclosure refers to an immunoglobulin or a fragment thereof or a derivative thereof, and includes any polypeptide comprising an antigen-binding site therein, whether produced in vitro or in vivo.
  • the term includes, but is not limited to, polyclonal, monoclonal, monospecific, multispecific, nonspecific, humanized, single-stranded, chimeric, synthetic, recombinant, hybrid, Mutated, grafted antibodies.
  • antibody also includes antibody fragments such as Fab, F(ab')2, Fv, scFv, Fd, dAb, and other antibody fragments that retain antigen binding function. Typically, such fragments will include antigen binding fragments.
  • single-chain antibody in this disclosure is an antibody formed by linking the variable region of the heavy chain and the variable region of the light chain through a short peptide (also called a linker, linker) with a limited number of amino acids. .
  • Fab fragment in this disclosure includes the variable domain of the heavy chain and the variable domain of the light chain, and also includes the constant domain of the light chain as well as the first constant domain (CH1) of the heavy chain.
  • Fab' fragments differ from Fab fragments by the addition of some residues at the carboxy-terminus of the CH1 domain of the heavy chain, including one or more cysteines from the antibody hinge region.
  • F(ab') 2 antibody fragments were originally produced as pairs of Fab' fragments with hinge cysteines between them.
  • IMGT numbering scheme in this disclosure is a new standardized numbering system introduced by Lefranc et al. for all protein sequences of the immunoglobulin superfamily, including variable domains from antibody light and heavy chains as well as sequences from different species. T cell receptor chain.
  • the IMGT numbering method is based on consecutive counting of residues based on germ-line V sequence (germ-line V) alignments.
  • the antibody numbering scheme adopted for antibodies in the present disclosure is the IMGT numbering scheme.
  • the present disclosure relates to the stringency of hybridization conditions used to define the degree of complementarity of two polynucleotides.
  • the aforementioned polynucleotides may be selected from DNA.
  • stringency refers to the conditions of temperature and ionic strength during hybridization, as well as the presence or absence of certain organic solvents. The higher the stringency, the higher the degree of complementarity between the target nucleotide sequence and the labeled polynucleotide sequence.
  • Stringency conditions refer to temperature and ionic conditions under which only nucleotide sequences with a high frequency of complementary bases will hybridize.
  • hybridizes under high stringency or very high stringency conditions describes the conditions for hybridization and washing.
  • Guidance for performing hybridization reactions can be found in Current Protocols in Molecular Biology, John Wiley and Sons, N.Y. (1989), 6.3.1-6.3.6.
  • the specific hybridization conditions mentioned in the present disclosure are as follows: 1) High stringency hybridization conditions: in 6X sodium chloride/sodium citrate (SSC) at about 45°C, then wash with 0.2X SSC, 0.1% SDS at 65°C One or more times; 2) Very high stringency hybridization conditions: 0.5M sodium phosphate at 65°C, 7% SDS, and then washed one or more times with 0.2X SSC, 1% SDS at 65°C.
  • sequence shown in SEQ ID NO: 1 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR1;
  • sequence shown in SEQ ID NO: 2 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR1;
  • sequence shown in SEQ ID NO: 3 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL CDR1;
  • sequence shown in SEQ ID NO: 4 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH CDR1;
  • sequence shown in SEQ ID NO: 5 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR2;
  • sequence shown in SEQ ID NO: 6 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR2;
  • sequence shown in SEQ ID NO: 7 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL CDR2;
  • sequence shown in SEQ ID NO: 8 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH CDR2;
  • sequence shown in SEQ ID NO: 9 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR3;
  • sequence shown in SEQ ID NO: 10 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR3;
  • sequence shown in SEQ ID NO: 11 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL CDR3;
  • sequence shown in SEQ ID NO: 12 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH CDR3;
  • sequence shown in SEQ ID NO: 13 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR4;
  • sequence shown in SEQ ID NO: 14 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR4;
  • sequence shown in SEQ ID NO: 15 is the nucleotide sequence encoding 76F-GST-NC16A-R2P1-H2 antibody VH;
  • sequence shown in SEQ ID NO: 16 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH;
  • sequence shown in SEQ ID NO: 17 is the nucleotide sequence encoding 76F-GST-NC16A-R2P1-H2 antibody VL;
  • sequence shown in SEQ ID NO: 18 is the amino acid sequence of the 76F-GST-NC16A-R2P1-H2 antibody VL;
  • sequences shown in SEQ ID NO: 19-34 are primer sequences
  • sequence shown in SEQ ID NO: 35 is the amino acid sequence of BP180 protein
  • sequence shown in SEQ ID NO: 36 is the nucleotide sequence encoding the BP180 protein.
  • Bullous pemphigoid is an autoimmune blistering disease mediated by pathogenic autoantibodies.
  • the severity of disease in BP patients is related to the titer of anti-BP180 antibodies. Therefore, detection of anti-BP180 antibody levels is important for the pathogenesis of BP. It is important for research, disease diagnosis and monitoring.
  • the present disclosure prepares BP180 protein, its amino acid sequence is shown in SEQ ID NO: 35, and the nucleotide sequence encoding BP180 protein is shown in SEQ ID NO: 36.
  • the preparation method of BP180 protein comprises the following steps:
  • the BP180 gene sequence was artificially synthesized, and the BP180 gene was recombined into the expression vector plasmid pGEX-6P-1 to obtain the BP180-pGEX expression vector; the cloning site was BamHI/XhoI.
  • BP180-pGEX expression vector was transfected into BL21(DE3) competent culture, and the precipitate was collected for GST tag affinity chromatography to obtain BP180 protein.
  • phage display technology is used to screen for antibodies or antigen-binding fragments with high affinity to BP180 protein.
  • antibodies or antigen-binding fragments with high affinity to BP180 protein include polyclonal, monoclonal, monospecific, multispecific, non-specific, humanized, single-chain, chimeric, synthetic recombinant, hybrid, mutated, grafted antibodies, or antibody fragments such as Fab, F(ab') 2 , FV, scFv, Fd, dAb and others retaining antigen-binding function.
  • the present disclosure isolates PBMCs of BP180 antibody-positive patients, and constructs phages comprising heavy chain variable regions (VH) and light chain variable regions (VL) by amplifying antibody VH and VL gene fragments therein
  • the library was displayed, and the human antibody capable of specifically binding to the BP180 antigen was screened through biopanning with the BP180 protein.
  • the disclosed method for screening anti-BP180 antibodies comprises the following steps:
  • PBMCs of BP180 antibody-positive patients were isolated, RNA was extracted, and RNA quality control was performed.
  • RT-PCR technology is used to reverse-transcribe the qualified RNA into cDNA, and amplify all the antibody VH and VL gene fragments in it.
  • the VH and VL gene fragments amplified in vitro were cloned into the pATA-scFv-2 vector to construct an antibody combinatorial library.
  • the antibody gene combination library is inserted into the immediate downstream of the leader series of the gene III (g3) of the membrane protein encoded by the phage, and the polypeptide or protein expressed by the foreign antibody gene can be displayed in the form of a fusion protein through the superinfection of the helper phage At the N-terminus of the phage coat protein pIII.
  • Each phage particle encodes and presents a different antibody, which contains billions of individual clones.
  • the genes encoding those antibodies that can bind to antigens are subjected to affinity enrichment-gentle elution-phage amplification for antigens in vitro, and then repeat the above enrichment screening process until specificity is obtained after several cycles.
  • Antibody phage library with good sex and strong affinity, and positive clones were screened from the antibody phage library. Positive clones were identified by ELISA method, and finally fully human antibodies with good specificity and strong affinity were screened from them.
  • step S1 includes: using The III 1st Strand cDNA Synthesis Kit (+gDNA wiper) reverse transcription kit reverse-transcribes the RNA of BP180 antibody-positive patients into cDNA, and amplifies the VH and VL fragments of the DNA.
  • the VK and V ⁇ gene fragments amplified in vitro were cloned into pATA-scFv-2 vector by cloning technology to form VK library and V ⁇ library.
  • the plasmid vectors of the VK library and the V ⁇ library were extracted using a plasmid extraction kit, and the VH gene fragments amplified in vitro were inserted into the plasmid vectors of the VK library and the V ⁇ library to form the KH library and the ⁇ H library.
  • the clones whose antigen group is 3 times larger than that of the control group are determined as positive clones, and these single clones are sequenced and analyzed.
  • a high-affinity antibody was finally obtained, which was named 76F-GST-NC16A-R2P1-H2.
  • the antibody has high activity, good stability, and strong specificity. It can be used as a reference standard for qualitative detection of BP180 positive, and can also quantitatively detect the level of anti-BP180 autoantibodies in BP patients. Provide effective information for diagnosis, monitoring of disease development, clinical drug treatment, and research on pathogenic mechanisms.
  • Example 1 Construction method of human ScFv phage display library
  • the reagents mainly used in this example are shown in Table 1.
  • primer sequences used in this example are as follows:
  • VK 1/2 ATGAGGSTCCCYGCTCAGCTGCTGG (SEQ ID NO: 23)
  • VK 3 CTCTTCCTCCTGCTACTCTGGCTCCCAG (SEQ ID NO: 24)
  • VK 4/5 ATTTCTCTGTTGCTCTGGATCTCTG (SEQ ID NO: 25)
  • V ⁇ 1 GGTCCTGGGCCCAGTCTGTGCTG (SEQ ID NO: 26)
  • V ⁇ 2 GGTCCTGGGCCCAGTCTGCCCTG (SEQ ID NO: 27)
  • V ⁇ 3 GCTCTGTGACCTCCTATGAGCTG (SEQ ID NO: 28)
  • V ⁇ 6 GTTCTTGGGCCAATTTTATGCTG (SEQ ID NO: 30)
  • V ⁇ 7 GGTCCAATTCYCAGGCTGTGGTG (SEQ ID NO: 31)
  • connection is carried out by the technical scheme described in Table 4. Incubate overnight at 16°C and heat inactivate at 65°C for 10 minutes to obtain ligation products.
  • connection is carried out by the technical scheme described in Table 6. Incubate overnight at 16°C and heat inactivate at 65°C for 10 minutes to obtain ligation products.
  • the primer sequences in Table 7 are as follows:
  • pATA-scFv-2 vector identification upstream primer F: AGCGGATAACAATTTCACACAGGA (SEQ ID NO: 35)
  • pATA-scFv-2 vector identification downstream primer R: GCCCCCTTATTAGCGTTTGCCATC (SEQ ID NO: 36)
  • the BP180 gene sequence was artificially synthesized, and the BP180 gene was recombined into the expression vector plasmid pGEX-6P-1 to obtain the BP180-pGEX expression vector; the cloning site was BamHI/XhoI.
  • amino acid sequence of BP180 is (SEQ ID NO: 35):
  • the gene sequence is (SEQ ID NO: 36):
  • Example 1 The main reagents used in Example 1 are shown in Table 8.
  • step 1 twice in a cycle, and use the eluted phage after the previous round of amplification for each input phage library.
  • Phage Incubation Add 100 ⁇ L of diluted phage to each well, as shown in Table 10, and incubate at 32° C. for 2 hours.
  • Coating Coat the microtiter plate and incubate overnight at 4°C.
  • Antigen group 100 ⁇ L/well of GST-NC16A protein (4 ⁇ g/mL)
  • control group 100 ⁇ L/well of protein dilution (0 ⁇ g/mL).
  • Phage Incubation Add 100 ⁇ L of phage supernatant to each well and incubate at 32°C for 2 hours.
  • Coating Coat the microtiter plate and incubate overnight at 4°C.
  • Antigen group 100 ⁇ L/well GST-NC16A protein (4 ⁇ g/mL)
  • control group 100 ⁇ L/well protein dilution (0 ⁇ g/mL).
  • Phage Incubation Add 100 ⁇ L of phage supernatant to each well and incubate at 32°C for 2 hours.
  • Secondary antibody incubation Add 100 ⁇ L of anti-M13-HRP antibody (1:9000) diluted with blocking solution to each well, and incubate at 32°C for 1 hour.
  • the obtained phage-positive clones were screened and subjected to full sequence sequencing to obtain the corresponding antibody heavy chain light chain, and the full sequence is shown in Table 14.
  • the base sequence of the heavy chain of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 15):
  • the heavy chain amino acid sequence of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 16):
  • the base sequence of the light chain of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 17):
  • amino acid sequence of the light chain of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 18):
  • Example 3 ELISA detection of OD values under different dilution conditions of antibodies
  • Washing Discard the liquid in the ELISA plate, and wash each well three times with 300 ⁇ L of 0.05% PBST.
  • Blocking 300 ⁇ L of 5% skimmed milk (dissolved in PBS) was added to each well, and blocked at 37° C. for 2 hours.
  • Plate reading Use a microplate reader to read the value at 450nm-630nm, as shown in Figure 6.

Abstract

The present disclosure relates to the field of biological medicines, and relates to a humanized antibody binding to a bullous pemphigoid (BP) specific antigen peptide, a preparation method, and a use. Specifically, the present disclosure relates to a monoclonal antibody, the antibody specifically binding to an NC16A domain of a BP180 antigen protein, a preparation method for the monoclonal antibody, and a use of the monoclonal antibody in the preparation of a drug for diagnosing, preventing or treating BP. The anti-BP180 antibody or antigen binding fragment screened in the present disclosure specifically binds to a BP180 antigen, and can be used as a reference standard for the quantitative detection of positive BP180, realizing the quantitative detection of the level of an anti-BP180NC16A autoantibody in a BP patient, and achieving important significance for clinical diagnosis, illness state monitoring and treatment of the BP patient.

Description

结合BP特异性抗原肽的人源抗体、制备方法及用途Human antibody binding to BP-specific antigen peptide, preparation method and use 技术领域technical field
本公开属于生物医药领域,涉及一种结合BP特异性抗原肽的人源抗体、制备方法及用途。具体来说,本公开涉及一种单克隆抗体,所述抗体特异性结合BP180抗原蛋白的NC16A结构域,单克隆抗体的制备方法及其前述单克隆抗体在制备诊断、预防或治疗大疱性类天疱疮的药物中的用途。The disclosure belongs to the field of biomedicine, and relates to a human antibody that binds to a BP-specific antigen peptide, a preparation method and an application. Specifically, the present disclosure relates to a monoclonal antibody that specifically binds to the NC16A domain of the BP180 antigenic protein, a method for preparing the monoclonal antibody, and the use of the aforementioned monoclonal antibody in preparing, diagnosing, preventing, or treating bullous Use in medicine for pemphigus.
背景技术Background technique
大疱性类天疱疮(Bullous Pemphigoid,BP)是一种在免疫系统攻击皮肤并引起水疱时产生的自身免疫性疾病,最常发病在60-80岁的老年人。此病特征性的临床表现为紧张性水疱和剧烈泛发的瘙痒症状。组织病理上,苏木精和曙红(HE)染色可见表皮下裂隙伴随嗜酸性粒细胞浸润,直接免疫荧光(DIF)可见沿基底膜带分布的线状沉积的自身抗体和/或补体,盐裂间接免疫荧光(ssIIF)可见自身抗体和/或补体沉积在表皮侧。Bullous Pemphigoid (BP), an autoimmune disease that occurs when the immune system attacks the skin and causes blisters, most commonly affects older adults aged 60-80. The characteristic clinical manifestations of the disease are tense blisters and intense, generalized pruritus. Histopathologically, hematoxylin and eosin (HE) staining showed subepidermal fissures with eosinophil infiltration, and direct immunofluorescence (DIF) showed linear deposition of autoantibodies and/or complement along the basement membrane zone, salt Split indirect immunofluorescence (ssIIF) shows autoantibodies and/or complement deposition on the epidermal side.
BP患者血清中自身抗体的靶抗原是BP180和BP230,也称作BPAG1和BPAG2,这两种抗原的分子量分别是180KD和230KD。BP180被认为是自身抗体的直接靶点。BP180是具有胞质NH2末端和细胞外COOH结构域的II型跨膜蛋白。N末端结构域、跨膜拉伸和细胞外C末端分别具有466、23和1008个氨基酸。胞外域包含15个胶原蛋白子域(COL1–COL15),其间散布着16个非胶原序列(NC1–NC16)。NC16A结构域是膜旁连接区,是形成胶原样三螺旋的核心。胞外区包含螺旋状结构,通过去整合素金属蛋白酶(ADAM)从细胞表面生理脱落。NC16A结构域有七个抗原位点,包括NC16A1(aa 490-506)、NC16A1-3(aa 490-534)、NC16A1-5(aa 490-562)、NC16A2(aa 507-520)、NC16A2.5(aa 514-532)、NC16A3(aa 521-534)和NC16A3-4(aa 522-545)。在这些位点中,NC16A2和NC16A2.5是主要的抗原位点,可被所有的IgG和IgE抗体捕获。据报道,BP180-NC16A抗体滴度与BP患者的疾病严重程度相关。用同源的人BP180-NC16A簇区域取代小鼠BP180-NC14A,并在小鼠体内注射完整IgG或针对BP患者的BP180-NC16A亲和纯化的IgG抗体,皮肤出现脆性增加。BP180的结构和定位表明它是连接细胞内外半桥体蛋白的核心锚定蛋白,在BP的发病机制中起着关键作用,BP180的NC16A结构域被认为是BP的主要致病性表位。因此,识别BP180的靶区对于了解BP180的发病机制和临床特征具有重要意义。The target antigens of autoantibodies in the serum of BP patients are BP180 and BP230, also known as BPAG1 and BPAG2, and the molecular weights of these two antigens are 180KD and 230KD, respectively. BP180 is considered a direct target of autoantibodies. BP180 is a type II transmembrane protein with a cytoplasmic NH2 terminus and an extracellular COOH domain. The N-terminal domain, transmembrane stretch and extracellular C-terminus have 466, 23 and 1008 amino acids, respectively. The extracellular domain contains 15 collagen subdomains (COL1–COL15) interspersed with 16 noncollagenous sequences (NC1–NC16). The NC16A domain is the paramembrane junction region, which is the core of collagen-like triple helix formation. The extracellular domain contains a helical structure that is physiologically shed from the cell surface by disintegrin metalloproteinases (ADAMs). The NC16A domain has seven antigenic sites, including NC16A1(aa 490-506), NC16A1-3(aa 490-534), NC16A1-5(aa 490-562), NC16A2(aa 507-520), NC16A2.5 (aa 514-532), NC16A3 (aa 521-534), and NC16A3-4 (aa 522-545). Among these sites, NC16A2 and NC16A2.5 are the main antigenic sites that can be captured by all IgG and IgE antibodies. BP180-NC16A antibody titers have been reported to correlate with disease severity in BP patients. Replacing mouse BP180-NC14A with the homologous human BP180-NC16A cluster region and injecting mice with intact IgG or affinity-purified IgG antibodies against BP180-NC16A from BP patients showed increased skin fragility. The structure and localization of BP180 indicated that it is the core anchor protein connecting extracellular and extracellular hemidosomal proteins and plays a key role in the pathogenesis of BP. The NC16A domain of BP180 is considered to be the main pathogenic epitope of BP. Therefore, identifying the target region of BP180 is of great significance for understanding the pathogenesis and clinical characteristics of BP180.
BP是一个谱系疾病,尽管大多数病人在治疗后可得到临床缓解,但在老年患者中还是有相当的死亡率,尤其是80岁以上患者死亡率可达25%。此外,在癌症患者人群开展免疫治疗也会引发BP疾病的发生。PD-1/PD-L1检查点抑制剂多用于治疗各种实体和血液系统恶性肿瘤,是一类近年来报道较多的诱发BP的药物。大部分病例在PD-1/PD-L1抑制剂开始治疗后6-8个月内出现水疱或大疱,少数病例出现黏膜受累。随着PD-1免疫治疗的普及,未来针对BP检测的需求会越来越多。目前如何快速准确诊断此类疾病缺乏有效检测手段。BP is a spectrum disease. Although most patients can achieve clinical remission after treatment, there is still a considerable mortality rate in elderly patients, especially in patients over 80 years old. The mortality rate can reach 25%. In addition, the development of immunotherapy in cancer patients can also lead to the occurrence of BP disease. PD-1/PD-L1 checkpoint inhibitors are mostly used to treat various solid and hematological malignancies, and are a class of drugs that induce BP that have been reported more in recent years. Vesicles or bullae occurred within 6-8 months after starting PD-1/PD-L1 inhibitor therapy in most cases, and mucosal involvement occurred in a few cases. With the popularization of PD-1 immunotherapy, the demand for BP detection will increase in the future. At present, how to quickly and accurately diagnose such diseases lacks effective detection methods.
IgG是BP致病性自身抗体的一种,其靶抗原主要是BP180。BP-IgG与BP180结合后激活补体,诱导抗原肽段的细胞内化,导致角质形成细胞与基底膜的粘附力减弱。热休克蛋白90(HSP90)在BP患者体内的血清水平与BP180-NC16A IgG抗体呈反比,即抗BP180-NC16A IgG抗体通过可溶性炎症趋化介质产生的炎症反应间接增强细胞内HSP90的表达,并同时抑制细胞向外周血释放HSP90。细胞内HSP90异常高表达,释放相关趋化因子趋化嗜酸性粒细胞和中性粒细胞等炎性细胞浸润,并释放一些蛋白水解酶和多种炎症介质,参与BP的病理改变和水疱的形成。IgG is a kind of BP pathogenic autoantibody, and its target antigen is mainly BP180. The combination of BP-IgG and BP180 activates complement, induces the internalization of antigenic peptides, and weakens the adhesion between keratinocytes and basement membrane. The serum level of heat shock protein 90 (HSP90) in BP patients is inversely proportional to the BP180-NC16A IgG antibody, that is, the anti-BP180-NC16A IgG antibody indirectly enhances the expression of intracellular HSP90 through the inflammatory response generated by soluble inflammatory chemotactic mediators, and at the same time Inhibit the release of HSP90 from cells to peripheral blood. The abnormally high expression of HSP90 in the cells releases related chemokines to infiltrate inflammatory cells such as eosinophils and neutrophils, and releases some proteolytic enzymes and various inflammatory mediators to participate in the pathological changes of BP and the formation of blisters .
BP的诊断标准包括临床表现、组织病理、直接免疫荧光、间接免疫荧光、特异性抗 体检查,根据病情严重程度采用不同的治疗方案,主要依靠糖皮质激素、抗生素和免疫抑制剂等。目前糖皮质激素是公认的治疗BP的一线药物,临床疗效显著,但长期使用可引发大量并发症,有些严重的并发症甚至阻碍了临床上某些患者对该药物的使用。因此,需要提供一种用于大疱性类天疱疮的诊断或者治疗的试剂。The diagnostic criteria for BP include clinical manifestations, histopathology, direct immunofluorescence, indirect immunofluorescence, and specific antibody tests. Different treatment options are adopted according to the severity of the disease, mainly relying on glucocorticoids, antibiotics, and immunosuppressants. At present, glucocorticoids are recognized as the first-line drug for the treatment of BP, with remarkable clinical efficacy, but long-term use can cause a large number of complications, and some serious complications even hinder the clinical use of this drug in some patients. Therefore, it is necessary to provide a reagent for the diagnosis or treatment of bullous pemphigoid.
与此同时,经典的杂交瘤技术需要耗费大量的时间和精力去获得高亲和力的抗体,而且需要进行后续的人源化改造,导致难以获得人源单克隆抗体,无法对抗体水平做到绝对定量。因此这些治疗方式缺乏特异性,疗效差且疗程长。噬菌体展示技术在1985年由Smith首次建立,经过三十多年的发展和完善,已被广泛应用于抗原抗体库的建立、药物设计、疫苗研究、病原检测、基因治疗、抗原表位研究及细胞信号转导研究等。噬菌体抗体库技术是通过制备人源抗体文库(library),把蛋白或多肽表达在噬菌体的表面,从而筛选并富集特异性抗体。已经提出了可以从单pot抗体文库系统中筛选出几乎所有与抗原发生特异性反应的重组人单克隆抗体可能性,因此,当使用噬菌体抗体技术时,能获得可应用于体内诊断或治疗的各种抗体片段(Fab或ScFv)。At the same time, the classic hybridoma technology requires a lot of time and energy to obtain high-affinity antibodies, and subsequent humanization is required, making it difficult to obtain human monoclonal antibodies and to achieve absolute quantification of antibody levels . Therefore, these treatment methods lack specificity, poor curative effect and long course of treatment. Phage display technology was first established by Smith in 1985. After more than 30 years of development and improvement, it has been widely used in the establishment of antigen antibody library, drug design, vaccine research, pathogen detection, gene therapy, epitope research and cell Signal transduction research, etc. Phage antibody library technology is to screen and enrich specific antibodies by preparing a human antibody library (library) and expressing proteins or polypeptides on the surface of phages. The possibility has been raised that almost all recombinant human monoclonal antibodies that specifically react with an antigen can be screened from a single-pot antibody library system, and therefore, when using phage antibody technology, various antibodies that can be applied to in vivo diagnosis or therapy can be obtained. Antibody fragments (Fab or ScFv).
发明内容Contents of the invention
发明要解决的问题The problem to be solved by the invention
基于现有技术中存在的问题,本公开筛选出一种针对抗大疱性类天疱疮抗原BP180的人源性单克隆抗体。Based on the problems in the prior art, the present disclosure screens out a humanized monoclonal antibody against bullous pemphigoid antigen BP180.
用于解决问题的方案solutions to problems
第一方面,本公开提供了分离的抗BP180的抗体或其抗原结合片段,其包含重链可变区,其中,编码所述重链可变区的序列包含如下所示序列中的一种或多种:In a first aspect, the present disclosure provides an isolated anti-BP180 antibody or an antigen-binding fragment thereof, which comprises a heavy chain variable region, wherein the sequence encoding the heavy chain variable region comprises one of the sequences shown below or Various:
(a 1)如SEQ ID NO:4所示的氨基酸序列; (a 1 ) the amino acid sequence shown in SEQ ID NO: 4;
(a 2)与SEQ ID NO:4所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; ( a2 ) Compared with the sequence shown in SEQ ID NO: 4, there are 1, 2 or 3 amino acid sequences of conservative mutations;
(a 3)如SEQ ID NO:8所示的氨基酸序列; ( a3 ) the amino acid sequence shown in SEQ ID NO: 8;
(a 4)与SEQ ID NO:8所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; ( a4 ) Compared with the sequence shown in SEQ ID NO: 8, there are 1, 2 or 3 amino acid sequences of conservative mutations;
(a 5)如SEQ ID NO:12所示的氨基酸序列; ( a5 ) the amino acid sequence shown in SEQ ID NO: 12;
(a 6)与SEQ ID NO:12所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; (a 6 ) Compared with the sequence shown in SEQ ID NO: 12, there are 1, 2 or 3 amino acid sequences of conservative mutations;
所述重链可变区为根据IMGT的分析方法编码。The heavy chain variable region is encoded according to the analysis method of IMGT.
在一些实施方式中,根据本公开所述的抗体或其抗原结合片段,其包含轻链可变区,其中,编码所述轻链可变区的序列包含如下所示序列中的一种或多种:In some embodiments, the antibody or antigen-binding fragment thereof according to the present disclosure comprises a light chain variable region, wherein the sequence encoding the light chain variable region comprises one or more of the sequences shown below kind:
(b 1)如SEQ ID NO:3所示的氨基酸序列; (b 1 ) the amino acid sequence shown in SEQ ID NO: 3;
(b 2)与SEQ ID NO:3所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; ( b2 ) Compared with the sequence shown in SEQ ID NO: 3, there are 1, 2 or 3 amino acid sequences of conservative mutations;
(b 3)如SEQ ID NO:7所示的氨基酸序列; (b 3 ) the amino acid sequence shown in SEQ ID NO: 7;
(b 4)与SEQ ID NO:7所示的序列相比,存在1个或2个保守突变的氨基酸序列; (b 4 ) Compared with the sequence shown in SEQ ID NO: 7, there are 1 or 2 amino acid sequences with conservative mutations;
(b 5)如SEQ ID NO:11所示的氨基酸序列; (b 5 ) the amino acid sequence shown in SEQ ID NO: 11;
(b 6)与SEQ ID NO:11所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; (b 6 ) Compared with the sequence shown in SEQ ID NO: 11, there are 1, 2 or 3 amino acid sequences of conservative mutations;
所述轻链可变区为根据IMGT的分析方法编码。The light chain variable region is encoded according to the analysis method of IMGT.
在一些实施方式中,根据本公开所述的抗体或其抗原结合片段,其包含重链可变区(VH)和轻链可变区(VL),所述轻链可变区(VL)包含VL互补决定区(CDR)1、VL互补决定区(CDR)2和VL互补决定区(CDR)3,所述重链可变区(VH)包含VH互补决定区(CDR)1、VH互补决定区(CDR)2和VH互补决定区(CDR)3;并且,In some embodiments, an antibody or antigen-binding fragment thereof according to the present disclosure, comprising a heavy chain variable region (VH) and a light chain variable region (VL), the light chain variable region (VL) comprising VL complementarity determining region (CDR) 1, VL complementarity determining region (CDR) 2 and VL complementarity determining region (CDR) 3, the heavy chain variable region (VH) comprises VH complementarity determining region (CDR) 1, VH complementarity determining region region (CDR) 2 and VH complementarity determining region (CDR) 3; and,
所述VL由如下氨基酸编码:VLCDR1包含如SEQ ID NO:3所示的氨基酸序列,VLCDR2包含如SEQ ID NO:7所示的氨基酸序列,VLCDR3包含如SEQ ID NO:11所示 的氨基酸序列;The VL is encoded by the following amino acids: VLCDR1 comprises the amino acid sequence shown in SEQ ID NO: 3, VLCDR2 comprises the amino acid sequence shown in SEQ ID NO: 7, and VLCDR3 comprises the amino acid sequence shown in SEQ ID NO: 11;
所述VH由如下氨基酸编码:VHCDR1包含如SEQ ID NO:4所示的氨基酸序列,VHCDR2包含如SEQ ID NO:8所示的氨基酸序列,VHCDR3包含如SEQ ID NO:12所示的氨基酸序列。The VH is encoded by the following amino acids: VHCDR1 contains the amino acid sequence shown in SEQ ID NO: 4, VHCDR2 contains the amino acid sequence shown in SEQ ID NO: 8, and VHCDR3 contains the amino acid sequence shown in SEQ ID NO: 12.
在一些实施方式中,根据本公开所述的抗体或其抗原结合片段,其中,编码所述抗体或其抗原结合片段包含如下所示序列中的一种或多种:In some embodiments, the antibody or antigen-binding fragment thereof according to the present disclosure, wherein the encoding of the antibody or antigen-binding fragment thereof comprises one or more of the following sequences:
(i)VH包含如SEQ ID NO:16所示的氨基酸序列,和VL包含如SEQ ID NO:18所示的氨基酸序列;(i) VH comprises the amino acid sequence shown in SEQ ID NO: 16, and VL comprises the amino acid sequence shown in SEQ ID NO: 18;
(ii)与(i)所示序列相比,存在保守突变的序列。(ii) Compared with the sequence shown in (i), there is a sequence of conservative mutations.
第二方面,本公开提供了一种多核苷酸,其中,所述多核苷酸选自(a)-(d)中的任一项:In a second aspect, the present disclosure provides a polynucleotide, wherein the polynucleotide is selected from any one of (a)-(d):
(a)包含如SEQ ID NO:15、SEQ ID NO:17任一序列或其组合所示的核苷酸序列;(a) comprising a nucleotide sequence as shown in any sequence of SEQ ID NO: 15, SEQ ID NO: 17 or a combination thereof;
(b)包含如SEQ ID NO:15、SEQ ID NO:17任一序列或其组合所示的核苷酸序列的反向互补序列的核苷酸序列;(b) a nucleotide sequence comprising the reverse complement of the nucleotide sequence shown in any one of SEQ ID NO: 15, SEQ ID NO: 17 or a combination thereof;
(c)在高严格性杂交条件或非常高严格性杂交条件下,能够与(a)-(b)中的任一项所示的核苷酸序列杂交的序列的反向互补序列;(c) under high stringency hybridization conditions or very high stringency hybridization conditions, the reverse complement of the sequence capable of hybridizing to the nucleotide sequence shown in any one of (a)-(b);
(d)与(a)-(c)中的任一项所示的核苷酸序列具有至少90%,可选至少95%,优选至少97%,更优选至少98%,最优选至少99%的序列同一性的序列。(d) has at least 90%, optionally at least 95%, preferably at least 97%, more preferably at least 98%, most preferably at least 99% of the nucleotide sequence shown in any one of (a)-(c) sequence of sequence identity.
第三方面,本公开提供了一种载体,其中,所述载体包含根据第二方面所述的多核苷酸。In a third aspect, the present disclosure provides a vector, wherein the vector comprises the polynucleotide according to the second aspect.
第四方面,本公开提供了一种分离的宿主细胞,其中,所述宿主细胞包含如第三方面所述的载体。In a fourth aspect, the present disclosure provides an isolated host cell, wherein the host cell comprises the vector as described in the third aspect.
第五方面,本公开提供了一种制备稳定表达目标蛋白的宿主细胞的方法,其中,所述方法包含利用第三方面所述的载体,转化初始宿主细胞的步骤。In a fifth aspect, the present disclosure provides a method for preparing a host cell stably expressing a target protein, wherein the method comprises the step of transforming the initial host cell with the vector described in the third aspect.
第六方面,本公开提供了一种制备目标蛋白的方法,所述方法包含利用第四方面所述的宿主细胞或通过第五方面所述的方法,制备所述目标蛋白。In a sixth aspect, the present disclosure provides a method for preparing a target protein, the method comprising preparing the target protein by using the host cell described in the fourth aspect or by the method described in the fifth aspect.
第七方面,本公开提供了根据第五方面所述的方法制备的抗体或其结合片段。In a seventh aspect, the present disclosure provides an antibody or binding fragment thereof prepared according to the method of the fifth aspect.
第八方面,本公开提供了一种检测抗BP180抗体的方法,其中,所述方法包括使用第一方面或第七方面所述的抗体或其抗原结合片段对待测样品进行检测的步骤;In an eighth aspect, the present disclosure provides a method for detecting an anti-BP180 antibody, wherein the method includes the step of using the antibody or antigen-binding fragment thereof described in the first aspect or the seventh aspect to detect the sample to be tested;
可选地,所述方法包括对待测样品中的抗BP180抗体进行定量的步骤。Optionally, the method includes the step of quantifying the anti-BP180 antibody in the sample to be tested.
第九方面,本公开提供了一种试剂盒,其中,所述试剂盒包含根据第一方面或第七方面所述的抗体或其抗原结合片段。In a ninth aspect, the present disclosure provides a kit, wherein the kit comprises the antibody or antigen-binding fragment thereof according to the first aspect or the seventh aspect.
第十方面,本公开提供了一种组合物,其中,所述组合物中含有根据第一方面或第七方面所述的抗体或其抗原结合片段。In a tenth aspect, the present disclosure provides a composition, wherein the composition contains the antibody or antigen-binding fragment thereof according to the first or seventh aspect.
第十一方面,本公开提供了根据第一方面或第七方面所述的抗体或其抗原结合片段,或第十方面所述的组合物在如下(1)-(4)至少一项中的用途:In an eleventh aspect, the present disclosure provides the antibody or antigen-binding fragment thereof according to the first aspect or the seventh aspect, or the composition described in the tenth aspect in at least one of the following (1)-(4) use:
(1)检测抗BP180抗体,或制备用于检测抗BP180抗体的试剂或试剂盒;(1) Detecting anti-BP180 antibodies, or preparing reagents or kits for detecting anti-BP180 antibodies;
(2)制备用于诊断大疱性类天疱疮的试剂或试剂盒;(2) Preparation of reagents or kits for diagnosing bullous pemphigoid;
(3)制备用于监测大疱性类天疱疮的病情进展的试剂或试剂盒;(3) Preparation of reagents or kits for monitoring the progression of bullous pemphigoid;
(4)制备用于研究大疱性类天疱疮的致病机理的试剂或试剂盒。(4) Preparation of reagents or kits for studying the pathogenic mechanism of bullous pemphigoid.
第十二方面,本公开提供了一种预防或治疗大疱性类天疱疮的方法,其中,使用根据第一方面或第七方面所述的抗体或其抗原结合片段,或根据第十方面所述的组合物给予受试者。In a twelfth aspect, the present disclosure provides a method for preventing or treating bullous pemphigoid, wherein the antibody or antigen-binding fragment thereof according to the first aspect or the seventh aspect is used, or according to the tenth aspect The composition is administered to a subject.
发明的效果The effect of the invention
本公开筛选出一种针对抗大疱性类天疱疮抗原BP180的人源性单克隆抗体。该抗体通过与BP180结合,活性高、稳定性好,且具有较强的特异性,能作为定性检测BP180阳性的参考标准,能够定量检测BP患者中抗BP180NC16A自身抗体水平,从而监测病情活动度,可以用于BP患者的临床诊断和治疗。The present disclosure screens out a humanized monoclonal antibody against bullous pemphigoid antigen BP180. By binding to BP180, the antibody has high activity, good stability, and strong specificity. It can be used as a reference standard for qualitative detection of BP180 positivity, and can quantitatively detect the level of anti-BP180NC16A autoantibodies in BP patients, thereby monitoring disease activity. It can be used for clinical diagnosis and treatment of BP patients.
附图说明Description of drawings
图1示出了VL噬菌体文库的单克隆菌PCR琼脂糖凝胶电泳图,其对应于本公开构建的VL噬菌体文库。其中,泳道M为DL2000,泳道1-16分别为pATA-VK,泳道17-32分别为pATA-Vλ。Fig. 1 shows the PCR agarose gel electrophoresis pattern of the monoclonal bacteria of the VL phage library, which corresponds to the VL phage library constructed in the present disclosure. Among them, lane M is DL2000, lanes 1-16 are pATA-VK, and lanes 17-32 are pATA-Vλ.
图2示出了KH噬菌体文库的单克隆菌PCR琼脂糖凝胶电泳图,其对应于本公开构建的KH噬菌体文库。其中,泳道M为DL2000,泳道1-48分别为pATA-scFv-KH。Figure 2 shows the PCR agarose gel electrophoresis image of the monoclonal KH phage library, which corresponds to the KH phage library constructed in the present disclosure. Wherein, lane M is DL2000, and lanes 1-48 are pATA-scFv-KH respectively.
图3示出了λH噬菌体文库的单克隆菌PCR琼脂糖凝胶电泳图,其对应于本公开构建的λH噬菌体文库。其中,泳道M为DL2000,泳道1-48分别为pATA-scFv-λH。Fig. 3 shows the PCR agarose gel electrophoresis image of the monoclonal phage library of λH, which corresponds to the phage library of λH constructed in the present disclosure. Among them, lane M is DL2000, and lanes 1-48 are pATA-scFv-λH, respectively.
图4示出了对噬菌体展示文库进行单克隆测序分析的结果。其中,左图为文库序列轻链分析结果,右图为文库序列重链分析结果。Figure 4 shows the results of monoclonal sequencing analysis of the phage display library. Among them, the left picture is the light chain analysis result of the library sequence, and the right picture is the heavy chain analysis result of the library sequence.
图5示出了目标蛋白BP180SDS-PAGE电泳图。从前述电泳图的结果来看,蛋白大小34KDa,纯度大于90%。Figure 5 shows the SDS-PAGE electrophoresis of the target protein BP180. According to the results of the aforementioned electrophoresis diagram, the protein size is 34KDa, and the purity is greater than 90%.
图6示出了76F-GST-NC16A-R2P1-H2抗体不同浓度稀释下的ELISA结果。Fig. 6 shows the ELISA results of 76F-GST-NC16A-R2P1-H2 antibody diluted at different concentrations.
具体实施方式Detailed ways
定义definition
在本公开的权利要求和/或说明书中,词语“一(a)”或“一(an)”或“一(the)”可以指“一个”,但也可以指“一个或多个”、“至少一个”以及“一个或多于一个”。In the claims and/or specification of the present disclosure, the word "one (a)" or "one (an)" or "one (the)" may mean "one", but may also mean "one or more", "at least one" and "one or more than one".
如在权利要求和说明书中所使用的,词语“包含”、“具有”、“包括”或“含有”是指包括在内的或开放式的,并不排除额外的、未引述的元件或方法步骤。与此同时,“包含”、“具有”、“包括”或“含有”也可以表示封闭式的,排除额外的、未引述的元件或方法步骤。As used in the claims and specification, the words "comprising", "having", "comprising" or "containing" mean inclusive or open-ended and do not exclude additional, non-recited elements or means step. At the same time, "comprising", "having", "including" or "comprising" can also mean enclosing, excluding additional, unrecited elements or method steps.
在整个申请文件中,术语“约”表示:一个值包括测定该值所使用的装置或方法的误差的标准偏差。Throughout this application, the term "about" means that a value includes the standard deviation of error of the apparatus or method used to determine the value.
虽然所公开的内容支持术语“或”的定义仅为替代物以及“和/或”,但除非明确表示仅为替代物或替代物之间相互排斥外,权利要求中的术语“或”是指“和/或”。Although the disclosure supports the definition of the term "or" as an alternative only and "and/or", the term "or" in the claims refers to "and / or".
如本公开所使用的,术语“大疱性类天疱疮”(Bullous Pemphigoid,BP),一般认为是自身免疫性疾病,大部分患者血清中有抗基底膜带自身抗体,抗原抗体结合导致基底膜带损伤形成水疱。As used in this disclosure, the term "Bullous Pemphigoid" (Bullous Pemphigoid, BP) is generally considered to be an autoimmune disease. Most patients have anti-basilar membrane zone autoantibodies in their serum, and the combination of antigen and antibody leads to basal Damage to the membranous bands forms blisters.
本发明上下文中使用的术语“个体”、“患者”或“受试者”包括哺乳动物。哺乳动物包括但不限于,家养动物(例如,牛,羊,猫,狗和马),灵长类动物(例如,人和非人灵长类动物如猴),兔,以及啮齿类动物(例如,小鼠和大鼠)。The term "individual", "patient" or "subject" as used in the context of the present invention includes mammals. Mammals include, but are not limited to, domesticated animals (e.g., cattle, sheep, cats, dogs, and horses), primates (e.g., humans and non-human primates such as monkeys), rabbits, and rodents (e.g., , mice and rats).
如本公开所使用的,术语“BP180抗原”(简称为BP180)也被称作BPAG1抗原,其分子量分别是180KD。BP180被认为是自身抗体的直接靶点。BP180是具有胞质NH2末端和细胞外COOH结构域的II型跨膜蛋白。N末端结构域、跨膜拉伸和细胞外C末端分别具有466、23和1008个氨基酸。胞外域包含15个胶原蛋白子域(COL1–COL15),其间散布着16个非胶原序列(NC1–NC16)。As used in this disclosure, the term "BP180 antigen" (abbreviated as BP180) is also called BPAG1 antigen, and its molecular weight is 180KD, respectively. BP180 is considered a direct target of autoantibodies. BP180 is a type II transmembrane protein with a cytoplasmic NH2 terminus and an extracellular COOH domain. The N-terminal domain, transmembrane stretch and extracellular C-terminus have 466, 23 and 1008 amino acids, respectively. The extracellular domain contains 15 collagen subdomains (COL1–COL15) interspersed with 16 noncollagenous sequences (NC1–NC16).
如本公开所使用的,术语“保守突变”是指可正常维持蛋白质的功能的突变(例如,氨基酸的置换、插入和/或缺失)。示例性的,保守突变为保守置换。As used in this disclosure, the term "conservative mutation" refers to a mutation (eg, amino acid substitution, insertion and/or deletion) that can normally maintain the function of a protein. Exemplary, conservative mutations are conservative substitutions.
如本公开所使用的,“保守置换”通常在蛋白质的一个或多个位点上交换一种氨基酸。这种取代可以是保守的。作为被视作保守置换的置换,具体而言,可以举出Ala向Ser或 Thr的置换、Arg向Gln、His或Lys的置换、Asn向Glu、Gln、Lys、His或Asp的置换、Asp向Asn、Glu或Gln的置换、Cys向Ser或Ala的置换、Gln向Asn、Glu、Lys、His、Asp或Arg的置换、Glu向Gly、Asn、Gln、Lys或Asp的置换、Gly向Pro的置换、His向Asn、Lys、Gln、Arg或Tyr的置换、Ile向Leu、Met、Val或Phe的置换、Leu向Ile、Met、Val或Phe的置换、Lys向Asn、Glu、Gln、His或Arg的置换、Met向Ile、Leu、Val或Phe的置换、Phe向Trp、Tyr、Met、Ile或Leu的置换、Ser向Thr或Ala的置换、Thr向Ser或Ala的置换、Trp向Phe或Tyr的置换、Tyr向His、Phe或Trp的置换、及Val向Met、Ile或Leu的置换。此外,保守突变还包括起因于基因所来源的个体差异、株、种的差异等天然产生的突变。As used in this disclosure, "conservative substitutions" generally exchange one amino acid at one or more positions in a protein. Such substitutions may be conservative. Specific examples of substitutions considered conservative substitutions include substitution of Ala to Ser or Thr, substitution of Arg to Gln, His, or Lys, substitution of Asn to Glu, Gln, Lys, His, or Asp, substitution of Asp to Asn, Glu or Gln substitution, Cys to Ser or Ala substitution, Gln to Asn, Glu, Lys, His, Asp or Arg substitution, Glu to Gly, Asn, Gln, Lys or Asp substitution, Gly to Pro substitution Substitution, His to Asn, Lys, Gln, Arg or Tyr, Ile to Leu, Met, Val or Phe, Leu to Ile, Met, Val or Phe, Lys to Asn, Glu, Gln, His or Substitution of Arg, substitution of Met to Ile, Leu, Val or Phe, substitution of Phe to Trp, Tyr, Met, Ile or Leu, substitution of Ser to Thr or Ala, substitution of Thr to Ser or Ala, substitution of Trp to Phe or Substitution of Tyr, substitution of Tyr to His, Phe or Trp, and substitution of Val to Met, Ile or Leu. In addition, conservative mutations also include naturally occurring mutations due to individual differences in gene origin, differences in strains, and species.
本公开中的“序列同一性”和“同一性百分比”指两个或更多个多核苷酸或多肽之间相同(即同一)的核苷酸或氨基酸的百分比。两个或更多个多核苷酸或多肽之间的序列同一性可通过以下方法测定:将多核苷酸或多肽的核苷酸或氨基酸序列对准且对经对准的多核苷酸或多肽中含有相同核苷酸或氨基酸残基的位置数目进行评分,且将其与经对准的多核苷酸或多肽中含有不同核苷酸或氨基酸残基的位置数目进行比较。多核苷酸可例如通过含有不同核苷酸(即取代或突变)或缺失核苷酸(即一个或两个多核苷酸中的核苷酸插入或核苷酸缺失)而在一个位置处不同。多肽可例如通过含有不同氨基酸(即取代或突变)或缺失氨基酸(即一个或两个多肽中的氨基酸插入或氨基酸缺失)而在一个位置处不同。序列同一性可通过用含有相同核苷酸或氨基酸残基的位置数目除以多核苷酸或多肽中氨基酸残基的总数来计算。举例而言,可通过用含有相同核苷酸或氨基酸残基的位置数目除以多核苷酸或多肽中核苷酸或氨基酸残基的总数且乘以100来计算同一性百分比。"Sequence identity" and "percent identity" in the present disclosure refer to the percentage of nucleotides or amino acids that are identical (ie identical) between two or more polynucleotides or polypeptides. Sequence identity between two or more polynucleotides or polypeptides can be determined by aligning the nucleotide or amino acid sequences of the polynucleotides or polypeptides and comparing the sequence identity in the aligned polynucleotides or polypeptides. The number of positions containing the same nucleotide or amino acid residue is scored and compared to the number of positions in the aligned polynucleotide or polypeptide containing a different nucleotide or amino acid residue. Polynucleotides may differ at one position, for example, by containing different nucleotides (ie substitutions or mutations) or missing nucleotides (ie nucleotide insertions or nucleotide deletions in one or both polynucleotides). Polypeptides may differ at one position, for example, by containing different amino acids (ie, substitutions or mutations) or missing amino acids (ie, amino acid insertions or amino acid deletions in one or both polypeptides). Sequence identity can be calculated by dividing the number of positions containing the same nucleotide or amino acid residue by the total number of amino acid residues in the polynucleotide or polypeptide. Percent identity can be calculated, for example, by dividing the number of positions containing the same nucleotide or amino acid residue by the total number of nucleotides or amino acid residues in the polynucleotide or polypeptide and multiplying by 100.
本公开中的术语“噬菌体展示技术”,是将外源蛋白或多肽的DNA序列插入到噬菌体外壳蛋白结构基因的适当位置,使外源基因随外壳蛋白的表达而表达,同时,外源蛋白随噬菌体的重新组装而展示到噬菌体表面的生物技术。The term "phage display technology" in this disclosure is to insert the DNA sequence of foreign protein or polypeptide into the appropriate position of the phage coat protein structural gene, so that the foreign gene is expressed along with the expression of the coat protein, and at the same time, the foreign protein is Phage reassembly and display on the surface of phage biotechnology.
本公开中的术语“抗体”,指免疫球蛋白或其片段或它们的衍生物,并且包括其包含的抗原结合位点的任何多肽,而不管其是否是在体外或体内产生。该术语包括,但不限于,多克隆、单克隆、单特异性的、多特异性的、非特异性的、人源化、单链的、嵌合的、合成的、重组的、杂合的、突变的、嫁接的抗体。术语“抗体”还包括抗体片段例如Fab、F(ab’)2、FV、scFv、Fd、dAb和其它保留抗原结合功能的抗体片段。通常情况下,这样的片段将包括抗原结合片段。The term "antibody" in this disclosure refers to an immunoglobulin or a fragment thereof or a derivative thereof, and includes any polypeptide comprising an antigen-binding site therein, whether produced in vitro or in vivo. The term includes, but is not limited to, polyclonal, monoclonal, monospecific, multispecific, nonspecific, humanized, single-stranded, chimeric, synthetic, recombinant, hybrid, Mutated, grafted antibodies. The term "antibody" also includes antibody fragments such as Fab, F(ab')2, Fv, scFv, Fd, dAb, and other antibody fragments that retain antigen binding function. Typically, such fragments will include antigen binding fragments.
本公开中的术语“单链抗体”(scFv),是由抗体重链可变区和轻链可变区通过有限个氨基酸的短肽(也被称为连接子,linker)连接而成的抗体。The term "single-chain antibody" (scFv) in this disclosure is an antibody formed by linking the variable region of the heavy chain and the variable region of the light chain through a short peptide (also called a linker, linker) with a limited number of amino acids. .
本公开中的术语“Fab”片段包括重链可变结构域和轻链可变结构域,并且还包括轻链的恒定结构域以及重链的第一恒定结构域(CH1)。Fab’片段因在重链CH1结构域的羧基末端增加了一些残基(包括来自抗体铰链区的一个或多个半胱氨酸)而与Fab片段不同。F(ab’) 2抗体片段最初是作为成对Fab’片段生成的,在Fab’片段之间具有铰链半胱氨酸。 The term "Fab" fragment in this disclosure includes the variable domain of the heavy chain and the variable domain of the light chain, and also includes the constant domain of the light chain as well as the first constant domain (CH1) of the heavy chain. Fab' fragments differ from Fab fragments by the addition of some residues at the carboxy-terminus of the CH1 domain of the heavy chain, including one or more cysteines from the antibody hinge region. F(ab') 2 antibody fragments were originally produced as pairs of Fab' fragments with hinge cysteines between them.
本公开中的术语“IMGT编号方案”,是Lefranc等人为免疫球蛋白超家族的所有蛋白质序列引入了新的标准化编号系统,包括来自抗体轻链和重链的可变结构域以及来自不同物种的T细胞受体链。所述IMGT编号方法基于种系V序列(germ-line V)比对连续计数残基。The term "IMGT numbering scheme" in this disclosure is a new standardized numbering system introduced by Lefranc et al. for all protein sequences of the immunoglobulin superfamily, including variable domains from antibody light and heavy chains as well as sequences from different species. T cell receptor chain. The IMGT numbering method is based on consecutive counting of residues based on germ-line V sequence (germ-line V) alignments.
在本公开所描述的技术方案中,除非特别说明,否则本公开中针对抗体所采用的抗体编号方案均为IMGT编号方案。In the technical solutions described in the present disclosure, unless otherwise specified, the antibody numbering scheme adopted for antibodies in the present disclosure is the IMGT numbering scheme.
在一些技术方案中,本公开涉及用于限定两个多核苷酸互补程度的杂交条件严格性。可选的,前述多核苷酸可以选自DNA。本公开使用的“严格性”指杂交期间的温度和离子强度条件以及是否存在某些有机溶剂。严格性越高,靶核苷酸序列与经标记的多核苷酸 序列之间的互补程度越高。“严格条件”指仅具有高频率互补碱基的核苷酸序列将杂交的温度和离子条件。本文使用的术语“在高严格性或非常高的严格性条件下杂交”描述了用于杂交和洗涤的条件。用于进行杂交反应的指导可见于Current Protocols in MolecμLar Biology,John Wiley和Sons,N.Y.(1989),6.3.1-6.3.6中。本公开提及的具体杂交条件如下:1)高严格性杂交条件:在约45℃的6X氯化钠/柠檬酸钠(SSC)中,然后于65℃下用0.2X SSC、0.1%SDS洗涤一次或更多次;2)非常高严格性杂交条件:65℃的0.5M磷酸钠,7%SDS,然后于65℃下用0.2X SSC、1%SDS洗涤一次或更多次。In some aspects, the present disclosure relates to the stringency of hybridization conditions used to define the degree of complementarity of two polynucleotides. Optionally, the aforementioned polynucleotides may be selected from DNA. As used in this disclosure, "stringency" refers to the conditions of temperature and ionic strength during hybridization, as well as the presence or absence of certain organic solvents. The higher the stringency, the higher the degree of complementarity between the target nucleotide sequence and the labeled polynucleotide sequence. "Stringent conditions" refer to temperature and ionic conditions under which only nucleotide sequences with a high frequency of complementary bases will hybridize. The term "hybridizes under high stringency or very high stringency conditions" as used herein describes the conditions for hybridization and washing. Guidance for performing hybridization reactions can be found in Current Protocols in Molecular Biology, John Wiley and Sons, N.Y. (1989), 6.3.1-6.3.6. The specific hybridization conditions mentioned in the present disclosure are as follows: 1) High stringency hybridization conditions: in 6X sodium chloride/sodium citrate (SSC) at about 45°C, then wash with 0.2X SSC, 0.1% SDS at 65°C One or more times; 2) Very high stringency hybridization conditions: 0.5M sodium phosphate at 65°C, 7% SDS, and then washed one or more times with 0.2X SSC, 1% SDS at 65°C.
技术方案Technical solutions
在本公开的技术方案中,说明书核苷酸和氨基酸序列表的编号所代表的含义如下所示:In the technical solution of the present disclosure, the meanings represented by the numbers in the nucleotide and amino acid sequence listings of the description are as follows:
SEQ ID NO:1所示序列为76F-GST-NC16A-R2P1-H2抗体VL FR1的氨基酸序列;The sequence shown in SEQ ID NO: 1 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR1;
SEQ ID NO:2所示序列为76F-GST-NC16A-R2P1-H2抗体VH FR1的氨基酸序列;The sequence shown in SEQ ID NO: 2 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR1;
SEQ ID NO:3所示序列为76F-GST-NC16A-R2P1-H2抗体VL CDR1的氨基酸序列;The sequence shown in SEQ ID NO: 3 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL CDR1;
SEQ ID NO:4所示序列为76F-GST-NC16A-R2P1-H2抗体VH CDR1的氨基酸序列;The sequence shown in SEQ ID NO: 4 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH CDR1;
SEQ ID NO:5所示序列为76F-GST-NC16A-R2P1-H2抗体VL FR2的氨基酸序列;The sequence shown in SEQ ID NO: 5 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR2;
SEQ ID NO:6所示序列为76F-GST-NC16A-R2P1-H2抗体VH FR2的氨基酸序列;The sequence shown in SEQ ID NO: 6 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR2;
SEQ ID NO:7所示序列为76F-GST-NC16A-R2P1-H2抗体VL CDR2的氨基酸序列;The sequence shown in SEQ ID NO: 7 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL CDR2;
SEQ ID NO:8所示序列为76F-GST-NC16A-R2P1-H2抗体VH CDR2的氨基酸序列;The sequence shown in SEQ ID NO: 8 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH CDR2;
SEQ ID NO:9所示序列为76F-GST-NC16A-R2P1-H2抗体VL FR3的氨基酸序列;The sequence shown in SEQ ID NO: 9 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR3;
SEQ ID NO:10所示序列为76F-GST-NC16A-R2P1-H2抗体VH FR3的氨基酸序列;The sequence shown in SEQ ID NO: 10 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR3;
SEQ ID NO:11所示序列为76F-GST-NC16A-R2P1-H2抗体VL CDR3的氨基酸序列;The sequence shown in SEQ ID NO: 11 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL CDR3;
SEQ ID NO:12所示序列为76F-GST-NC16A-R2P1-H2抗体VH CDR3的氨基酸序列;The sequence shown in SEQ ID NO: 12 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH CDR3;
SEQ ID NO:13所示序列为76F-GST-NC16A-R2P1-H2抗体VL FR4的氨基酸序列;The sequence shown in SEQ ID NO: 13 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VL FR4;
SEQ ID NO:14所示序列为76F-GST-NC16A-R2P1-H2抗体VH FR4的氨基酸序列;The sequence shown in SEQ ID NO: 14 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH FR4;
SEQ ID NO:15所示序列为编码76F-GST-NC16A-R2P1-H2抗体VH的核苷酸序列;The sequence shown in SEQ ID NO: 15 is the nucleotide sequence encoding 76F-GST-NC16A-R2P1-H2 antibody VH;
SEQ ID NO:16所示序列为76F-GST-NC16A-R2P1-H2抗体VH的氨基酸序列;The sequence shown in SEQ ID NO: 16 is the amino acid sequence of 76F-GST-NC16A-R2P1-H2 antibody VH;
SEQ ID NO:17所示序列为编码76F-GST-NC16A-R2P1-H2抗体VL的核苷酸序列;The sequence shown in SEQ ID NO: 17 is the nucleotide sequence encoding 76F-GST-NC16A-R2P1-H2 antibody VL;
SEQ ID NO:18所示序列为76F-GST-NC16A-R2P1-H2抗体VL的氨基酸序列;The sequence shown in SEQ ID NO: 18 is the amino acid sequence of the 76F-GST-NC16A-R2P1-H2 antibody VL;
SEQ ID NO:19~34所示序列为引物序列;The sequences shown in SEQ ID NO: 19-34 are primer sequences;
SEQ ID NO:35所示序列为BP180蛋白的氨基酸序列;The sequence shown in SEQ ID NO: 35 is the amino acid sequence of BP180 protein;
SEQ ID NO:36所示序列为编码BP180蛋白的核苷酸序列。The sequence shown in SEQ ID NO: 36 is the nucleotide sequence encoding the BP180 protein.
抗BP180抗体或其抗原结合片段Anti-BP180 antibody or antigen-binding fragment thereof
大疱性类天疱疮是由致病性自身抗体介导的自身免疫性水疱病,BP患者的疾病严重程度与抗BP180抗体滴度相关,因此,检测抗BP180的抗体水平对于BP的发病机制研究、疾病诊断及监测病情具有重要意义。Bullous pemphigoid is an autoimmune blistering disease mediated by pathogenic autoantibodies. The severity of disease in BP patients is related to the titer of anti-BP180 antibodies. Therefore, detection of anti-BP180 antibody levels is important for the pathogenesis of BP. It is important for research, disease diagnosis and monitoring.
在一些实施方式中,本公开制备了BP180蛋白,其氨基酸序列如SEQ ID NO:35所示,编码BP180蛋白的核苷酸序列如SEQ ID NO:36所示。In some embodiments, the present disclosure prepares BP180 protein, its amino acid sequence is shown in SEQ ID NO: 35, and the nucleotide sequence encoding BP180 protein is shown in SEQ ID NO: 36.
在一些具体的实施方式中,BP180蛋白的制备方法包括如下步骤:In some specific embodiments, the preparation method of BP180 protein comprises the following steps:
(1)人工合成了BP180基因序列,将BP180基因重组到表达载体质粒pGEX-6P-1中,得到BP180-pGEX表达载体;克隆位点BamHI/XhoI。(1) The BP180 gene sequence was artificially synthesized, and the BP180 gene was recombined into the expression vector plasmid pGEX-6P-1 to obtain the BP180-pGEX expression vector; the cloning site was BamHI/XhoI.
(2)将BP180-pGEX表达载体转染到BL21(DE3)感受态中培养,收集沉淀进行GST标签亲和层析得到BP180蛋白。(2) The BP180-pGEX expression vector was transfected into BL21(DE3) competent culture, and the precipitate was collected for GST tag affinity chromatography to obtain BP180 protein.
在一些实施方式中,利用噬菌体展示技术筛选与BP180蛋白具有高亲和力的抗体或 抗原结合片段。示例性的,与BP180蛋白具有高亲和力的抗体或抗原结合片段包括多克隆、单克隆、单特异性的、多特异性的、非特异性的、人源化、单链的、嵌合的、合成的、重组的、杂合的、突变的、嫁接的抗体,或者如Fab、F(ab’) 2、FV、scFv、Fd、dAb和其它保留抗原结合功能的抗体片段。 In some embodiments, phage display technology is used to screen for antibodies or antigen-binding fragments with high affinity to BP180 protein. Exemplary, antibodies or antigen-binding fragments with high affinity to BP180 protein include polyclonal, monoclonal, monospecific, multispecific, non-specific, humanized, single-chain, chimeric, synthetic recombinant, hybrid, mutated, grafted antibodies, or antibody fragments such as Fab, F(ab') 2 , FV, scFv, Fd, dAb and others retaining antigen-binding function.
在一些实施方式中,本公开分离了BP180抗体阳性患者的PBMCs,通过扩增其中的抗体VH、VL基因片段构建成包含重链可变区(VH)和轻链可变区(VL)的噬菌体展示文库,通过与BP180蛋白进行生物淘选,进而筛选到了能够特异性结合BP180抗原的人源抗体。In some embodiments, the present disclosure isolates PBMCs of BP180 antibody-positive patients, and constructs phages comprising heavy chain variable regions (VH) and light chain variable regions (VL) by amplifying antibody VH and VL gene fragments therein The library was displayed, and the human antibody capable of specifically binding to the BP180 antigen was screened through biopanning with the BP180 protein.
在一些具体的实施方式中,本公开筛选抗BP180抗体的方法包括如下步骤:In some specific embodiments, the disclosed method for screening anti-BP180 antibodies comprises the following steps:
S1,分离BP180抗体阳性患者的PBMCs,提取RNA并对RNA进行质检。采用RT-PCR技术将质检合格的RNA反转录成cDNA,扩增其中全部的抗体VH、VL基因片段。将体外扩增的VH、VL基因片段克隆入pATA-scFv-2载体,构建成抗体组合文库。S1, PBMCs of BP180 antibody-positive patients were isolated, RNA was extracted, and RNA quality control was performed. RT-PCR technology is used to reverse-transcribe the qualified RNA into cDNA, and amplify all the antibody VH and VL gene fragments in it. The VH and VL gene fragments amplified in vitro were cloned into the pATA-scFv-2 vector to construct an antibody combinatorial library.
S2,将抗体基因组合文库插入噬菌体编码的膜蛋白的基因III(g3)的先导系列的紧邻下游,通过辅助噬菌体的超感染,使外源抗体基因表达的多肽或蛋白可以以融合蛋白的形式展示在噬菌体外壳蛋白pIII的N端。每个噬菌体颗粒编码并呈递不同的抗体,其含有数十亿个单个克隆。在这些抗体文库中,编码可与抗原结合的那些抗体的基因通过在体外对抗原进行亲和力富集-温和洗脱-噬菌体扩增,再继续重复以上富集筛选过程,直至数个循环后获得特异性好、亲和力强的抗体噬菌体库,从抗体噬菌体库中筛选阳性克隆。通过ELISA方法对阳性克隆进行鉴定,最后从中筛选特异性好、亲和力强的全人源抗体。S2, the antibody gene combination library is inserted into the immediate downstream of the leader series of the gene III (g3) of the membrane protein encoded by the phage, and the polypeptide or protein expressed by the foreign antibody gene can be displayed in the form of a fusion protein through the superinfection of the helper phage At the N-terminus of the phage coat protein pIII. Each phage particle encodes and presents a different antibody, which contains billions of individual clones. In these antibody libraries, the genes encoding those antibodies that can bind to antigens are subjected to affinity enrichment-gentle elution-phage amplification for antigens in vitro, and then repeat the above enrichment screening process until specificity is obtained after several cycles. Antibody phage library with good sex and strong affinity, and positive clones were screened from the antibody phage library. Positive clones were identified by ELISA method, and finally fully human antibodies with good specificity and strong affinity were screened from them.
在一些更为具体的实施方式中,步骤S1包括:使用
Figure PCTCN2021132667-appb-000001
III 1st Strand cDNA Synthesis Kit(+gDNA wiper)反转录试剂盒将BP180抗体阳性患者的RNA反转录成cDNA,对DNA的VH和VL片段进行扩增。体外扩增得到的VK、Vλ基因片段通过克隆技术克隆入pATA-scFv-2载体,组成VK文库和Vλ文库。使用质粒提取试剂盒提取VK文库和Vλ文库的质粒载体,将体外扩增的VH基因片段插入VK文库和Vλ文库的质粒载体,构成KH文库和λH文库。
In some more specific implementation manners, step S1 includes: using
Figure PCTCN2021132667-appb-000001
The III 1st Strand cDNA Synthesis Kit (+gDNA wiper) reverse transcription kit reverse-transcribes the RNA of BP180 antibody-positive patients into cDNA, and amplifies the VH and VL fragments of the DNA. The VK and Vλ gene fragments amplified in vitro were cloned into pATA-scFv-2 vector by cloning technology to form VK library and Vλ library. The plasmid vectors of the VK library and the Vλ library were extracted using a plasmid extraction kit, and the VH gene fragments amplified in vitro were inserted into the plasmid vectors of the VK library and the Vλ library to form the KH library and the λH library.
本公开经过三轮抗体噬菌体库的筛选,将抗原组大于3倍对照组的克隆定为阳性克隆,对这些单克隆进行测序分析。排除掉错误抗体序列和重复抗体序列,并结合ELISA实验所反映的抗原抗体特异性结合能力,最终得到了1条高亲和力的抗体,命名为76F-GST-NC16A-R2P1-H2。该抗体活性高、稳定性好,且具有较强的特异性,能作为定性检测BP180阳性的参考标准,也能定量检测BP患者中抗BP180自身抗体水平,为大疱性类天疱疮患者的诊断、病情发展监测、临床用药治疗以及致病机理的研究等方面提供有效信息。In this disclosure, after three rounds of screening of antibody phage library, the clones whose antigen group is 3 times larger than that of the control group are determined as positive clones, and these single clones are sequenced and analyzed. After eliminating the wrong antibody sequence and repeated antibody sequence, combined with the antigen-antibody specific binding ability reflected by the ELISA experiment, a high-affinity antibody was finally obtained, which was named 76F-GST-NC16A-R2P1-H2. The antibody has high activity, good stability, and strong specificity. It can be used as a reference standard for qualitative detection of BP180 positive, and can also quantitatively detect the level of anti-BP180 autoantibodies in BP patients. Provide effective information for diagnosis, monitoring of disease development, clinical drug treatment, and research on pathogenic mechanisms.
实施例Example
本公开的其他目的、特征和优点将从以下详细描述中变得明显。但是,应当理解的是,详细描述和具体实施例(虽然表示本公开的具体实施方式)仅为解释性目的而给出,因为在阅读该详细说明后,在本公开的精神和范围内所作出的各种改变和修饰,对于本领域技术人员来说将变得显而易见。Other objects, features and advantages of the present disclosure will become apparent from the following detailed description. It should be understood, however, that the detailed description and specific examples, while indicating specific embodiments of the disclosure, are given for illustrative purposes only, since, upon reading this detailed description, all further changes will be made within the spirit and scope of the disclosure. Various changes and modifications will become apparent to those skilled in the art.
实施例中采用的所有试剂,除非另有强调,否则均可以通过商业途径购买获得。All reagents used in the examples are commercially available unless otherwise noted.
实施例一:人源ScFv噬菌体展示文库的构建方法Example 1: Construction method of human ScFv phage display library
本实施例中所主要使用的试剂如表1所示。The reagents mainly used in this example are shown in Table 1.
表1实施例1中使用的主要试剂The main reagent used in the embodiment 1 of table 1
Figure PCTCN2021132667-appb-000002
Figure PCTCN2021132667-appb-000002
1.文库构建1. Library construction
1.1组装重链可变区(VH)和轻链可变区(VL)1.1 Assembly of heavy chain variable region (VH) and light chain variable region (VL)
表2 PCR反应条件和步骤Table 2 PCR reaction conditions and steps
Figure PCTCN2021132667-appb-000003
Figure PCTCN2021132667-appb-000003
其中,变性,退火,延伸(1)这三个步骤,重复30次。Among them, the three steps of denaturation, annealing and extension (1) were repeated 30 times.
本实施例中使用的引物序列如下:The primer sequences used in this example are as follows:
Forward(F):Forward(F):
5′L-VH 1:ACAGGTGCCCACTCCCAGGTGCAG(SEQ ID NO:19)5'L-VH 1: ACAGGTGCCCACTCCCAGGTGCAG (SEQ ID NO: 19)
5′L-VH 3:AAGGTGTCCAGTGTGARGTGCAG(SEQ ID NO:20)5′ L-VH 3: AAGGTGTCCAGTGTGARGTGCAG (SEQ ID NO: 20)
5′L-VH 4/6:CCCAGATGGGTCCTGTCCCAGGTGCAG(SEQ ID NO:21)5'L-VH 4/6: CCCAGATGGGTCCTGTCCCAGGTGCAG (SEQ ID NO: 21)
5′L-VH 5/7:CAAGGAGTCTGTTCCGAGGTGCAG(SEQ ID NO:22)5'L-VH 5/7: CAAGGAGTCTGTTCCGAGGTGCAG (SEQ ID NO: 22)
5′L VK 1/2:ATGAGGSTCCCYGCTCAGCTGCTGG(SEQ ID NO:23) 5'L VK 1/2: ATGAGGSTCCCYGCTCAGCTGCTGG (SEQ ID NO: 23)
5′L VK 3:CTCTTCCTCCTGCTACTCTGGCTCCCAG(SEQ ID NO:24)5'L VK 3: CTCTTCCTCCTGCTACTCTGGCTCCCAG (SEQ ID NO: 24)
5′L VK 4/5:ATTTCTCTGTTGCTCTGGATCTCTG(SEQ ID NO:25)5'L VK 4/5: ATTTCTCTGTTGCTCTGGATCTCTG (SEQ ID NO: 25)
5′L Vλ1:GGTCCTGGGCCCAGTCTGTGCTG(SEQ ID NO:26)5'L Vλ1: GGTCCTGGGCCCAGTCTGTGCTG (SEQ ID NO: 26)
5′L Vλ2:GGTCCTGGGCCCAGTCTGCCCTG(SEQ ID NO:27)5'L Vλ2: GGTCCTGGGCCCAGTCTGCCCTG (SEQ ID NO: 27)
5′L Vλ3:GCTCTGTGACCTCCTATGAGCTG(SEQ ID NO:28)5'L Vλ3: GCTCTGTGACCTCCTATGAGCTG (SEQ ID NO: 28)
5′L Vλ4/5:GGTCTCTCTCSCAGCYTGTGCTG(SEQ ID NO:29)5'L Vλ4/5: GGTCTCTCTCSCAGCYTGTGCTG (SEQ ID NO: 29)
5′L Vλ6:GTTCTTGGGCCAATTTTATGCTG(SEQ ID NO:30)5'L Vλ6: GTTCTTGGGCCAATTTTATGCTG (SEQ ID NO: 30)
5′L Vλ7:GGTCCAATTCYCAGGCTGTGGTG(SEQ ID NO:31)5'L Vλ7: GGTCCAATTCYCAGGCTGTGGTG (SEQ ID NO: 31)
5′L Vλ8/9/10:GAGTGGATTCTCAGACTGTGGTG(SEQ ID NO:32)5′L Vλ8/9/10: GAGTGGATTCTCAGACTGTGGTG (SEQ ID NO: 32)
Reverse(R):Reverse(R):
3′CK:TGCTGTCCTTGCTGTCCTGCT(SEQ ID NO:33)3'CK: TGCTGTCCTTGCTGTCCTGCT (SEQ ID NO: 33)
3′Cλ:CACCAGTGTGGCCTTGTTGGCTTG(SEQ ID NO:34)3'Cλ: CACCAGTGTGGCCTTGTTGGCTTG (SEQ ID NO: 34)
1.2构建轻链可变区噬菌体展示文库1.2 Construction of light chain variable region phage display library
1.2.1准备pATA-scFv-2载体为文库克隆1.2.1 Preparation of pATA-scFv-2 vector for library cloning
1.2.2消化载体和PCR产物1.2.2 Digest vector and PCR product
表3消化载体和PCR产物的反应体系Table 3 Reaction system for digesting vector and PCR product
Figure PCTCN2021132667-appb-000004
Figure PCTCN2021132667-appb-000004
通过表3记载的技术方案,获得PCR产物。Through the technical scheme recorded in Table 3, PCR products were obtained.
1.2.3连接1.2.3 Connection
表4连接反应体系Table 4 Connection reaction system
 the pATA-VKpATA-VK pATA-VλpATA-Vλ
T4 DNA连接酶(Thermo)T4 DNA Ligase (Thermo) 3μL 3μL 3μL3μL
10×T4 DNA连接酶缓冲液10×T4 DNA Ligase Buffer 8μL8μL 8μL8μL
载体(NheI/NotI)Vector (NheI/NotI) 1μg1μg 1μg1μg
VK or Vλfragment(NheI/NotI)VK or Vλfragment(NheI/NotI) 0.3μg0.3μg 0.3μg0.3μg
H 2O H 2 O 添加至反应体系共80μLAdd to the reaction system a total of 80μL 添加至反应体系共80μLAdd to the reaction system a total of 80μL
通过表4记载的技术方案进行连接。16℃孵育过夜,65℃加热灭活10min,以获得连接产物。The connection is carried out by the technical scheme described in Table 4. Incubate overnight at 16°C and heat inactivate at 65°C for 10 minutes to obtain ligation products.
1.2.4电转1.2.4 Electric transfer
1.2.4.1 TG1感受态细胞的制备。1.2.4.1 Preparation of TG1 competent cells.
1.2.4.2 37℃预温1mL SOC培养基(Sigma,S1797)。将电穿孔比色皿(0.1厘米的间隙)和微离心管放在冰上(每个转换反应一个比色皿和一个微离心管)。1.2.4.2 Pre-warm 1mL SOC medium (Sigma, S1797) at 37°C. Place electroporation cuvettes (0.1 cm gap) and microcentrifuge tubes on ice (one cuvette and one microcentrifuge tube per transformation reaction).
1.2.4.3从-80℃的冰箱中取出Electrocompetent细胞,放在冰上直到它们完全融化(10-15分钟)。细胞解冻后,轻轻混匀。将50μL细胞放入在冰上的冷冻微离心管中。1.2.4.3 Take out the Electrocompetent cells from the -80°C freezer and place them on ice until they completely melt (10-15 minutes). After the cells are thawed, mix gently. Place 50 μL of cells into a chilled microcentrifuge tube on ice.
1.2.4.4小心地将3μL的DNA混合物加入到冷冻的电穿孔比色皿中,不要产生气泡。 用你的手腕快速向下轻弹试管,使细胞沉积在底部。1.2.4.4 Carefully add 3 μL of the DNA mixture to the frozen electroporation cuvette without creating air bubbles. Flick the tube down quickly with your wrist to settle the cells to the bottom.
1.2.4.5在600Ω,10μF和1.8kV下电穿孔。在脉冲的10秒内,立即在每个试管中加入1mL预热的SOC培养基。37℃,250rpm摇晃1小时。1.2.4.5 Electroporation at 600 Ω, 10 μF and 1.8 kV. Immediately add 1 mL of pre-warmed SOC medium to each tube within 10 s of the pulse. 37°C, shake at 250rpm for 1 hour.
1.2.4.6收集所有的电转化培养基。连续稀释10μL培养物到90μL SOC培养基中,涂布于LB/Amp/Glucose上。37℃孵育过夜。通过计数菌落数量,乘以培养体积,除以平板接种体积,计算转化子总数。1.2.4.6 Collect all electroporation medium. Serially dilute 10 μL of the culture into 90 μL of SOC medium and spread on LB/Amp/Glucose. Incubate overnight at 37°C. Calculate the total number of transformants by counting the number of colonies, multiplying by the culture volume, and dividing by the plating volume.
1.3构建VL-VH噬菌体展示文库1.3 Construction of VL-VH phage display library
1.3.1消化载体和PCR产物1.3.1 Digest vector and PCR product
表5消化反应体系Table 5 digestion reaction system
Figure PCTCN2021132667-appb-000005
Figure PCTCN2021132667-appb-000005
通过表5中的消化反应体系和反应步骤,获得消化后的PCR产物。Through the digestion reaction system and reaction steps in Table 5, the digested PCR product was obtained.
1.3.2连接1.3.2 Connection
表6连接反应体系Table 6 Connection reaction system
Figure PCTCN2021132667-appb-000006
Figure PCTCN2021132667-appb-000006
通过表6记载的技术方案进行连接。16℃孵育过夜,65℃加热灭活10min,以获得连接产物。The connection is carried out by the technical scheme described in Table 6. Incubate overnight at 16°C and heat inactivate at 65°C for 10 minutes to obtain ligation products.
1.3.3电转1.3.3 Electric transfer
1.3.3.1 TG1感受态细胞的制备。1.3.3.1 Preparation of TG1 competent cells.
1.3.3.2 37℃预温4mL SOC培养基(Sigma,S1797)。将电穿孔比色皿(0.2厘米的间隙)和微离心管放在冰上(每个转换反应一个比色皿和一个微离心管)。1.3.3.2 Pre-warm 4mL SOC medium (Sigma, S1797) at 37°C. Place electroporation cuvettes (0.2 cm gap) and microcentrifuge tubes on ice (one cuvette and one microcentrifuge tube per transformation reaction).
1.3.3.3从-80℃的冰箱中取出Electrocompetent细胞,放在冰上直到它们完全融化(10-15分钟)。细胞解冻后,轻轻混匀。1.3.3.3 Take out the Electrocompetent cells from the -80°C freezer and place them on ice until they completely melt (10-15 minutes). After the cells are thawed, mix gently.
1.3.3.4小心地将6μL的DNA混合物加入到冷冻的电穿孔比色皿中,不要产生气泡。用你的手腕快速向下轻弹试管,使细胞沉积在底部。1.3.3.4 Carefully add 6 μL of the DNA mixture to the frozen electroporation cuvette without creating air bubbles. Flick the tube down quickly with your wrist to settle the cells to the bottom.
1.3.3.5在600Ω,100Ω和2.5kV下电穿孔。在脉冲的10秒内,立即在每个试管中加入 2mL预热的SOC培养基。37℃,250rpm摇晃1小时。1.3.3.5 Electroporation at 600Ω, 100Ω and 2.5kV. Immediately add 2 mL of pre-warmed SOC medium to each tube within 10 seconds of the pulse. 37°C, shake at 250rpm for 1 hour.
1.3.3.6收集所有的电转化培养基。连续稀释10μL培养物到90μL SOC培养基中,涂布于LB/Amp/Glucose上。37℃孵育过夜。通过计数菌落数量,乘以培养体积,除以平板接种体积,计算转化子总数。1.3.3.6 Collect all electroporation medium. Serially dilute 10 μL of the culture into 90 μL of SOC medium and spread on LB/Amp/Glucose. Incubate overnight at 37°C. Calculate the total number of transformants by counting the number of colonies, multiplying by the culture volume, and dividing by the plating volume.
1.4文库评估1.4 Library evaluation
1.4.1菌落PCR:以构建好的文库为模板,进行PCR。1.4.1 Colony PCR: Perform PCR using the constructed library as a template.
表7 PCR反应条件Table 7 PCR reaction conditions
Figure PCTCN2021132667-appb-000007
Figure PCTCN2021132667-appb-000007
其中,变性,退火,延伸(1)这三个步骤,重复30次。Among them, the three steps of denaturation, annealing and extension (1) were repeated 30 times.
表7中的引物序列如下:The primer sequences in Table 7 are as follows:
pATA-scFv-2载体鉴定上游引物(F):AGCGGATAACAATTTCACACAGGA(SEQ ID NO:35)pATA-scFv-2 vector identification upstream primer (F): AGCGGATAACAATTTCACACAGGA (SEQ ID NO: 35)
pATA-scFv-2载体鉴定下游引物(R):GCCCCCTTATTAGCGTTTGCCATC(SEQ ID NO:36)pATA-scFv-2 vector identification downstream primer (R): GCCCCCTTATTAGCGTTTGCCATC (SEQ ID NO: 36)
PCR后琼脂糖凝胶电泳检测结果如图1-图3所示。The results of agarose gel electrophoresis after PCR are shown in Figures 1-3.
1.4.2测序1.4.2 Sequencing
挑选阳性克隆送到武汉擎科生物科技有限公司测序,测序质控结果如图4所示。The positive clones were selected and sent to Wuhan Qingke Biotechnology Co., Ltd. for sequencing. The sequencing quality control results are shown in Figure 4.
1.5表达BP180蛋白1.5 Expression of BP180 protein
人工合成BP180基因序列,将BP180基因重组到表达载体质粒pGEX-6P-1中,得到BP180-pGEX表达载体;克隆位点BamHI/XhoI。The BP180 gene sequence was artificially synthesized, and the BP180 gene was recombined into the expression vector plasmid pGEX-6P-1 to obtain the BP180-pGEX expression vector; the cloning site was BamHI/XhoI.
BP180的氨基酸序列为(SEQ ID NO:35):The amino acid sequence of BP180 is (SEQ ID NO: 35):
Figure PCTCN2021132667-appb-000008
Figure PCTCN2021132667-appb-000008
基因序列为(SEQ ID NO:36):The gene sequence is (SEQ ID NO: 36):
Figure PCTCN2021132667-appb-000009
Figure PCTCN2021132667-appb-000009
将BP180-pGEX表达载体转染到BL21(DE3)感受态中培养,收集沉淀进行GST标签亲和层析得到BP180蛋白;纯化后的BP180还需要进行SDS-PAGE电泳(聚丙烯酰胺凝胶电泳)以验证其纯度,纯化后的BP180SDS-PAGE电泳图如图5所示,纯度大于90%。Transfect the BP180-pGEX expression vector into BL21(DE3) competent culture, collect the precipitate and perform GST tag affinity chromatography to obtain the BP180 protein; the purified BP180 also needs to be subjected to SDS-PAGE electrophoresis (polyacrylamide gel electrophoresis) To verify its purity, the purified BP180 SDS-PAGE electrophoresis is shown in Figure 5, and the purity is greater than 90%.
实施例二:与BP180特异性结合的单克隆抗体的制备Example 2: Preparation of monoclonal antibody specifically binding to BP180
本实施例1使用的主要试剂如表8所示。The main reagents used in Example 1 are shown in Table 8.
表8实施例2中使用的主要试剂The main reagent used in the embodiment 2 of table 8
试剂Reagent 编号serial number 制造商manufacturer
96-well plate96-well plate 4259242592 Costar Costar
Tween 20Tween 20 P2287P2287 SigmaSigma
TrisTris RES3098T-B7RES3098T-B7 SigmaSigma
GlycineGlycine G8200G8200 SolarbioSolarbio
PEGPEG 181986181986 SigmaSigma
PBSPBS C10010500BTC10010500BT Lifelife
BSABSA A104912-100gA104912-100g aladdinaladdin
Skim milkSkim milk 63429326342932 BDBD
1.第一轮1. First round
1.1生物淘选1.1 Biopanning
1.1.1包被:包被免疫管,4℃孵育过夜。抗原组:1mL GST-NC16A转染液(50μg/mL),对照组:500μL转染液(0μg/mL)。GST-NC16A由实施例1中BP180-pGEX表达载体重组表达得到。1.1.1 Coating: Coat the immunotube and incubate overnight at 4°C. Antigen group: 1mL GST-NC16A transfection solution (50μg/mL), control group: 500μL transfection solution (0μg/mL). GST-NC16A is obtained by recombinant expression of the BP180-pGEX expression vector in Example 1.
1.1.2洗涤:弃掉免疫管中液体,用5mL 0.05%PBST洗涤三遍。1.1.2 Washing: Discard the liquid in the immunotube and wash three times with 5mL 0.05% PBST.
1.1.3封闭:在管中加入5mL 5%脱脂牛奶(PBST溶解),37℃孵育2小时。1.1.3 Blocking: Add 5mL 5% skimmed milk (dissolved in PBST) to the tube and incubate at 37°C for 2 hours.
1.1.4洗涤:弃掉免疫管中液体,用5mL 0.05%PBST洗涤一遍。1.1.4 Washing: Discard the liquid in the immunotube and wash once with 5mL 0.05% PBST.
1.1.5孵育:用1%脱脂牛奶(PBST溶解)稀释噬菌体文库,取1mL加入免疫管中,32℃孵育2小时。1.1.5 Incubation: Dilute the phage library with 1% skimmed milk (dissolved in PBST), take 1 mL into the immunotube, and incubate at 32°C for 2 hours.
1.1.6洗涤:弃掉免疫管中液体,用5mL 0.05%PBST洗涤三遍,用PBS洗涤两遍。1.1.6 Washing: Discard the liquid in the immunotube, wash three times with 5mL 0.05% PBST, and wash twice with PBS.
1.1.7洗脱:用1mL的甘氨酸-盐酸(pH 2.2)洗脱与BP180结合的噬菌体,再用Tris-HCl中和至pH 7.0。1.1.7 Elution: Use 1 mL of glycine-hydrochloric acid (pH 2.2) to elute the phage bound to BP180, and then use Tris-HCl to neutralize to pH 7.0.
1.2测定稀释噬菌体的滴度1.2 Determination of the titer of diluted phage
1.2.1培养大肠杆菌TG1直到OD600=0.4-0.6。1.2.1 Cultivate Escherichia coli TG1 until OD600=0.4-0.6.
1.2.2混合10μL稀释的洗脱后噬菌体和190μL大肠杆菌TG1。1.2.2 Mix 10 μL of diluted eluted phage and 190 μL of Escherichia coli TG1.
1.2.3 37℃培养混合物15分钟,然后倒到2×YT-A(Amp 100μg/mL)培养基中。将培养基倒扣培养在37℃处过夜。1.2.3 Incubate the mixture at 37°C for 15 minutes, then pour it into 2×YT-A (Amp 100μg/mL) medium. The medium was grown upside down at 37°C overnight.
1.3噬菌体文库扩增1.3 Phage library amplification
1.3.1将10μL E.coli TG1加到800μL of 2YT培养液中,在37℃混合培养至OD600=0.4-0.6。1.3.1 Add 10 μL of E.coli TG1 to 800 μL of 2YT culture medium, mix and culture at 37°C until OD600=0.4-0.6.
1.3.2将培养至对数期的TG1转入10mL 2YT-G培养液(终浓度2%葡萄糖),在摇床上37℃培养至OD600=0.4-0.6。1.3.2 Transfer TG1 cultured to the logarithmic phase into 10 mL of 2YT-G culture medium (final concentration 2% glucose), and culture it on a shaker at 37°C until OD600=0.4-0.6.
1.3.3加入洗脱后的产物,37℃孵育30分钟,37℃摇床培养30分钟。1.3.3 Add the eluted product, incubate at 37°C for 30 minutes, and incubate on a shaker at 37°C for 30 minutes.
1.3.4加入30mL 2YT-AG培养液(终浓度0.1%Amp,2%葡萄糖),37℃摇床培养1小时。1.3.4 Add 30mL 2YT-AG culture solution (final concentration 0.1% Amp, 2% glucose), and incubate at 37°C for 1 hour on a shaker.
1.3.5加入M13KO7(M13KO7:TG1=20:1),37℃孵育30分钟,37℃摇床培养30分钟。1.3.5 Add M13KO7 (M13KO7:TG1=20:1), incubate at 37°C for 30 minutes, and incubate on a shaker at 37°C for 30 minutes.
1.3.6菌液在5000rpm离心5分钟。用40mL 2YT-AK(终浓度Amp 100μg/mL,Kan  100μg/mL)重悬,30℃摇床孵育过夜。1.3.6 Centrifuge the bacterial solution at 5000rpm for 5 minutes. Resuspend with 40mL 2YT-AK (final concentration Amp 100μg/mL, Kan 100μg/mL) and incubate overnight on a shaker at 30°C.
1.3.7 8000rpm离心10分钟,取出上清,用1mL PBS重悬,12000rpm离心5分钟,将上清转移至新的1.5mL离心管。1.3.7 Centrifuge at 8000rpm for 10 minutes, remove the supernatant, resuspend in 1mL PBS, centrifuge at 12000rpm for 5 minutes, transfer the supernatant to a new 1.5mL centrifuge tube.
1.4扩增后的噬菌体文库滴度测定1.4 Determination of the titer of the amplified phage library
步骤同1.2。The steps are the same as 1.2.
2.第二轮到第三轮2. The second round to the third round
2.1生物淘选2.1 Biopanning
循环重复步骤1两次,每次投入的噬菌体文库均用前一轮扩增后的洗脱噬菌体。 Repeat step 1 twice in a cycle, and use the eluted phage after the previous round of amplification for each input phage library.
表9生物淘选结果Table 9 Biopanning Results
Figure PCTCN2021132667-appb-000010
Figure PCTCN2021132667-appb-000010
3.多克隆噬菌体ELISA3. Polyclonal Phage ELISA
3.1包被:包被酶标板,4℃孵育过夜。抗原组:100μL/每孔GST-NC16A蛋白(4μg/mL),对照组:100μL/每孔蛋白稀释液(0μg/mL)。3.1 Coating: Coat the microtiter plate and incubate overnight at 4°C. Antigen group: 100 μL/well GST-NC16A protein (4 μg/mL), control group: 100 μL/well protein dilution (0 μg/mL).
3.2洗涤:弃掉酶标板中液体,每孔用300μL的0.05%PBST洗涤三遍。3.2 Washing: Discard the liquid in the ELISA plate, and wash each well three times with 300 μL of 0.05% PBST.
3.3封闭:每孔加入300μL的5%脱脂牛奶(PBS溶解),37℃封闭2小时。3.3 Blocking: 300 μL of 5% skimmed milk (dissolved in PBS) was added to each well, and blocked at 37° C. for 2 hours.
3.4噬菌体孵育:每孔中加入100μL稀释后扩增噬菌体,如表10所示,32℃孵育2小时。3.4 Phage Incubation: Add 100 μL of diluted phage to each well, as shown in Table 10, and incubate at 32° C. for 2 hours.
3.5洗涤:同步骤3.2。3.5 Washing: Same as step 3.2.
3.6二抗孵育:每孔加入100μL用封闭液稀释的anti-M13-HRP antibody(1:9000),32℃孵育1小时。3.6 Secondary antibody incubation: Add 100 μL of anti-M13-HRP antibody (1:9000) diluted with blocking solution to each well, and incubate at 32°C for 1 hour.
3.7洗涤:同步骤3.2。3.7 Washing: Same as step 3.2.
3.8显色:每孔加100μL TMB,室温孵育,然后每孔加50μL 2M HCl终止反应。3.8 Color development: Add 100 μL TMB to each well, incubate at room temperature, then add 50 μL 2M HCl to each well to terminate the reaction.
3.9读板:使用酶标仪在450nm-630nm读取数值。读板结果如表10所示。3.9 Plate reading: Use a microplate reader to read the value at 450nm-630nm. The plate reading results are shown in Table 10.
表10多克隆噬菌体ELISA的结果Table 10 The result of polyclonal phage ELISA
Figure PCTCN2021132667-appb-000011
Figure PCTCN2021132667-appb-000011
4.单克隆噬菌体ELISA(根据多克隆结果选用第二轮洗脱产物进行单克隆)4. Monoclonal phage ELISA (according to the polyclonal results, select the second round of elution products for monoclonal)
4.1从培养皿中选择96个克隆,这些克隆在37℃250rpm培养,直到OD600nm=0.4-0.6。4.1 Select 96 clones from the culture dish, and culture these clones at 37° C. at 250 rpm until OD600nm=0.4-0.6.
4.2 M13KO7感染培养物(MOI=20:1),37℃孵育30分钟,37℃摇床培养30分钟。将菌液离心,并用等体积2×YT-AK(终浓度Amp 100μg/mL,Kan 100μg/mL)重悬沉淀,30℃培养过夜。4.2 Infect the culture with M13KO7 (MOI=20:1), incubate at 37°C for 30 minutes, and incubate at 37°C on a shaker for 30 minutes. Centrifuge the bacterial solution, resuspend the pellet with an equal volume of 2×YT-AK (final concentration Amp 100 μg/mL, Kan 100 μg/mL), and incubate overnight at 30°C.
4.3将培养物离心,上清液可用于ELISA。4.3 Centrifuge the culture and the supernatant can be used for ELISA.
4.4包被:包被酶标板,4℃孵育过夜。抗原组:100μL/每孔GST-NC16A蛋白(4μg/mL)的,对照组:100μL/每孔蛋白稀释液(0μg/mL)。4.4 Coating: Coat the microtiter plate and incubate overnight at 4°C. Antigen group: 100 μL/well of GST-NC16A protein (4 μg/mL), control group: 100 μL/well of protein dilution (0 μg/mL).
4.5洗涤:弃掉酶标板中液体,每孔用300μL的0.05%PBST洗涤三遍。4.5 Washing: Discard the liquid in the ELISA plate, and wash each well three times with 300 μL of 0.05% PBST.
4.6封闭:每孔加入300μL的5%脱脂牛奶(PBS溶解),37℃封闭2小时。4.6 Blocking: 300 μL of 5% skimmed milk (dissolved in PBS) was added to each well, and blocked at 37° C. for 2 hours.
4.7噬菌体孵育:每孔中加入100μL噬菌体上清,32℃孵育2小时。4.7 Phage Incubation: Add 100 μL of phage supernatant to each well and incubate at 32°C for 2 hours.
4.8洗涤:同步骤4.5。4.8 Washing: Same as step 4.5.
4.9二抗孵育:每孔加入100μL用封闭液稀释的anti-M13-HRP antibody(1:9000),32℃孵育1小时。4.9 Secondary antibody incubation: Add 100 μL of anti-M13-HRP antibody (1:9000) diluted with blocking solution to each well, and incubate at 32°C for 1 hour.
4.10洗涤:同步骤4.5。4.10 Washing: Same as step 4.5.
4.11显色:每孔加100μL TMB,室温孵育,然后每孔加50μL 2M HCl终止反应。4.11 Color development: Add 100 μL TMB to each well, incubate at room temperature, then add 50 μL 2M HCl to each well to terminate the reaction.
4.12读板:使用酶标仪在450nm-630nm读取数值,并对高特异性克隆进行测序。读板结果如表11和表12所示。4.12 Plate reading: Use a microplate reader to read the value at 450nm-630nm, and sequence the highly specific clones. The plate reading results are shown in Table 11 and Table 12.
表11抗原组单克隆噬菌体ELISA的结果Table 11 Results of antigen group monoclonal phage ELISA
 the 11 22 33 44 55 66 77 88 99 1010 1111 1212
AA 0.160.16 0.040.04 0.030.03 0.050.05 0.020.02 0.030.03 0.050.05 0.280.28 0.330.33 0.410.41 0.330.33 0.210.21
BB 0.030.03 0.020.02 0.020.02 0.050.05 0.030.03 0.030.03 0.040.04 0.050.05 0.040.04 0.040.04 0.060.06 0.060.06
CC 0.030.03 0.020.02 0.020.02 0.040.04 0.030.03 0.200.20 0.190.19 0.120.12 0.170.17 0.030.03 3.943.94 0.050.05
DD. 0.030.03 0.090.09 0.030.03 0.030.03 0.170.17 0.600.60 0.030.03 0.040.04 0.030.03 0.030.03 0.030.03 0.460.46
EE. 0.030.03 0.030.03 0.030.03 0.040.04 0.030.03 0.030.03 0.180.18 0.040.04 0.580.58 0.030.03 0.030.03 0.220.22
Ff 0.060.06 0.110.11 0.050.05 0.140.14 0.030.03 0.030.03 0.030.03 0.190.19 0.030.03 0.050.05 0.040.04 0.030.03
GG 0.030.03 0.040.04 0.190.19 0.110.11 0.120.12 0.030.03 0.030.03 0.100.10 0.050.05 0.160.16 0.170.17 0.040.04
Hh 0.050.05 3.383.38 0.040.04 0.160.16 0.040.04 0.040.04 0.180.18 0.040.04 0.030.03 0.170.17 0.040.04 1.621.62
表12对照组单克隆噬菌体ELISA的结果Table 12 The results of the monoclonal phage ELISA in the control group
 the 11 22 33 44 55 66 77 88 99 1010 1111 1212
AA 0.060.06 0.020.02 0.020.02 0.020.02 0.020.02 0.020.02 0.030.03 0.050.05 0.050.05 0.100.10 0.070.07 0.250.25
BB 0.030.03 0.030.03 0.020.02 0.020.02 0.030.03 0.020.02 0.030.03 0.020.02 0.020.02 0.020.02 0.020.02 0.040.04
CC 0.020.02 0.020.02 0.020.02 0.020.02 0.020.02 0.040.04 0.040.04 0.030.03 0.050.05 0.020.02 3.163.16 0.020.02
DD. 0.020.02 0.030.03 0.020.02 0.020.02 0.070.07 0.030.03 0.020.02 0.020.02 0.020.02 0.020.02 0.200.20 0.050.05
EE. 0.030.03 0.020.02 0.020.02 0.020.02 0.020.02 0.020.02 0.060.06 0.020.02 0.050.05 0.030.03 0.090.09 0.060.06
Ff 0.030.03 0.040.04 0.030.03 0.040.04 0.020.02 0.020.02 0.020.02 0.070.07 0.050.05 0.030.03 0.020.02 0.020.02
GG 0.030.03 0.040.04 0.050.05 0.020.02 0.030.03 0.160.16 0.020.02 0.030.03 0.030.03 0.080.08 0.060.06 0.040.04
Hh 0.060.06 0.030.03 0.020.02 0.040.04 0.020.02 0.030.03 0.050.05 0.030.03 0.030.03 0.040.04 0.050.05 0.280.28
5.阳性克隆验证ELISA5. Positive clone verification ELISA
5.1将50μL阳性克隆加入2mL 2YT-AG培养基(终浓度0.1%Amp,2%葡萄糖)中培养至OD600=0.4-0.6。5.1 Add 50 μL of positive clones to 2 mL of 2YT-AG medium (final concentration 0.1% Amp, 2% glucose) and culture to OD600=0.4-0.6.
5.2 M13KO7感染培养物(MOI=20:1),37℃孵育30分钟,37℃摇床培养30分钟。将菌 液离心,并用等体积2×YT-AK(终浓度Amp 100μg/mL,Kan 100μg/mL)重悬沉淀,30℃培养过夜。5.2 Infect the culture with M13KO7 (MOI=20:1), incubate at 37°C for 30 minutes, and incubate at 37°C on a shaker for 30 minutes. Centrifuge the bacterial solution, resuspend the pellet with an equal volume of 2×YT-AK (final concentration Amp 100 μg/mL, Kan 100 μg/mL), and incubate overnight at 30°C.
5.3将培养物离心,上清液可用于ELISA。5.3 Centrifuge the culture and the supernatant can be used for ELISA.
5.4包被:包被酶标板,4℃孵育过夜。抗原组:100μL/每孔GST-NC16A蛋白(4μg/mL),对照组:100μL/每孔蛋白稀释液(0μg/mL)。5.4 Coating: Coat the microtiter plate and incubate overnight at 4°C. Antigen group: 100 μL/well GST-NC16A protein (4 μg/mL), control group: 100 μL/well protein dilution (0 μg/mL).
5.5洗涤:弃掉酶标板中液体,每孔用300μL的0.05%PBST洗涤三遍。5.5 Washing: Discard the liquid in the ELISA plate, and wash each well three times with 300 μL of 0.05% PBST.
5.6封闭:每孔加入300μL的5%脱脂牛奶(PBS溶解),37℃封闭2小时。5.6 Blocking: 300 μL of 5% skimmed milk (dissolved in PBS) was added to each well, and blocked at 37° C. for 2 hours.
5.7噬菌体孵育:每孔中加入100μL噬菌体上清,32℃孵育2小时。5.7 Phage Incubation: Add 100 μL of phage supernatant to each well and incubate at 32°C for 2 hours.
5.8洗涤:同步骤4.5。5.8 Washing: Same as step 4.5.
5.9二抗孵育:每孔加入100μL用封闭液稀释的anti-M13-HRP antibody(1:9000),32℃孵育1小时。5.9 Secondary antibody incubation: Add 100 μL of anti-M13-HRP antibody (1:9000) diluted with blocking solution to each well, and incubate at 32°C for 1 hour.
5.10洗涤:同步骤4.5。5.10 Washing: Same as step 4.5.
5.11显色:每孔加100μL TMB,室温孵育,然后每孔加50μL 2M HCl终止反应。5.11 Color development: Add 100 μL TMB to each well, incubate at room temperature, then add 50 μL 2M HCl to each well to terminate the reaction.
5.12读板:使用酶标仪在450nm-630nm读取数值,并对高特异性克隆进行测序。读板结果如表13所示。5.12 Plate reading: Use a microplate reader to read the value at 450nm-630nm, and sequence the highly specific clones. The plate reading results are shown in Table 13.
表13阳性单克隆噬菌体ELISA的结果The result of table 13 positive monoclonal phage ELISA
Figure PCTCN2021132667-appb-000012
Figure PCTCN2021132667-appb-000012
6.抗体序列的测序6. Sequencing of antibody sequences
筛选得到的噬菌体阳性克隆,进行全序列测序,得到相应的抗体重链轻链,以及全序列如表14所示。The obtained phage-positive clones were screened and subjected to full sequence sequencing to obtain the corresponding antibody heavy chain light chain, and the full sequence is shown in Table 14.
表14 76F-GST-NC16A-R2P1-H2单克隆抗体序列Table 14 76F-GST-NC16A-R2P1-H2 monoclonal antibody sequence
Figure PCTCN2021132667-appb-000013
Figure PCTCN2021132667-appb-000013
76F-GST-NC16A-R2P1-H2抗体的重链碱基序列如下(SEQ ID NO:15):The base sequence of the heavy chain of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 15):
Figure PCTCN2021132667-appb-000014
Figure PCTCN2021132667-appb-000015
Figure PCTCN2021132667-appb-000014
Figure PCTCN2021132667-appb-000015
76F-GST-NC16A-R2P1-H2抗体的重链氨基酸序列如下(SEQ ID NO:16):The heavy chain amino acid sequence of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 16):
Figure PCTCN2021132667-appb-000016
Figure PCTCN2021132667-appb-000016
76F-GST-NC16A-R2P1-H2抗体的轻链碱基序列如下(SEQ ID NO:17):The base sequence of the light chain of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 17):
Figure PCTCN2021132667-appb-000017
Figure PCTCN2021132667-appb-000018
Figure PCTCN2021132667-appb-000017
Figure PCTCN2021132667-appb-000018
76F-GST-NC16A-R2P1-H2抗体的轻链氨基酸序列如下(SEQ ID NO:18):The amino acid sequence of the light chain of the 76F-GST-NC16A-R2P1-H2 antibody is as follows (SEQ ID NO: 18):
Figure PCTCN2021132667-appb-000019
Figure PCTCN2021132667-appb-000019
实施例三:ELISA检测抗体不同稀释浓度条件下的OD值Example 3: ELISA detection of OD values under different dilution conditions of antibodies
酶联免疫吸附反应ELISA实验步骤:Enzyme-linked immunosorbent reaction ELISA experimental steps:
1.包被:100μL/每孔GST-NC16A蛋白(4μg/mL)包被酶标板,4℃孵育过夜。1. Coating: 100 μL/well of GST-NC16A protein (4 μg/mL) was used to coat the microtiter plate, and incubated overnight at 4°C.
2.洗涤:弃掉酶标板中液体,每孔用300μL的0.05%PBST洗涤三遍。2. Washing: Discard the liquid in the ELISA plate, and wash each well three times with 300 μL of 0.05% PBST.
3.封闭:每孔加入300μL的5%脱脂牛奶(PBS溶解),37℃封闭2小时。3. Blocking: 300 μL of 5% skimmed milk (dissolved in PBS) was added to each well, and blocked at 37° C. for 2 hours.
4.阳性抗体孵育:将76F-GST-NC16A-R2P1-H2抗体进行梯度稀释,每孔中加入100μL稀释后的抗体溶液,37℃孵育1小时。4. Positive antibody incubation: 76F-GST-NC16A-R2P1-H2 antibody was serially diluted, and 100 μL of the diluted antibody solution was added to each well, and incubated at 37°C for 1 hour.
5.洗涤:同步骤4.5。5. Washing: Same as step 4.5.
6.二抗孵育:用封闭液10000倍稀释Goat Anti-Human IgG(H+L)antibody(Jackson,code:109-035-088),每孔加入100μL稀释的二抗,37℃孵育30分钟。6. Secondary antibody incubation: Dilute Goat Anti-Human IgG (H+L) antibody (Jackson, code: 109-035-088) 10,000 times with blocking solution, add 100 μL of diluted secondary antibody to each well, and incubate at 37°C for 30 minutes.
7.洗涤:同步骤4.5。7. Washing: Same as step 4.5.
8.显色:每孔加100μL TMB,37℃孵育10分钟,然后每孔加50μL 2M HCl终止反应。8. Color development: Add 100 μL TMB to each well, incubate at 37°C for 10 minutes, then add 50 μL 2M HCl to each well to terminate the reaction.
9.读板:使用酶标仪在450nm-630nm读取数值,如图6所示。9. Plate reading: Use a microplate reader to read the value at 450nm-630nm, as shown in Figure 6.
从图6的结果来看,证明了76F-GST-NC16A-R2P1-H2与BP180具有较强的特异性结合的能力。From the results in Figure 6, it is proved that 76F-GST-NC16A-R2P1-H2 has a strong ability to specifically bind to BP180.
本公开并不旨在限于具体公开的实施方案的范围,提供所述实施方案例如来说明本公开的各方面。从本文的描述和教导,对所述组合物和方法的各种修改将变得明显。可以在不脱离本公开的真正范围和精神的情况下实践这类变化,并且这类变化旨在落入本公开的范围内。The present disclosure is not intended to be limited in scope by the particular disclosed embodiments, which are provided, for example, to illustrate various aspects of the present disclosure. Various modifications to the compositions and methods will be apparent from the description and teachings herein. Such changes may be made without departing from the true scope and spirit of the present disclosure, and are intended to be within the scope of the present disclosure.

Claims (15)

  1. 分离的抗BP180的抗体或其抗原结合片段,其包含重链可变区,其中,编码所述重链可变区的序列包含如下所示序列中的一种或多种:An isolated anti-BP180 antibody or an antigen-binding fragment thereof comprising a heavy chain variable region, wherein the sequence encoding the heavy chain variable region comprises one or more of the following sequences:
    (a 1)如SEQ ID NO:4所示的氨基酸序列; (a 1 ) the amino acid sequence shown in SEQ ID NO: 4;
    (a 2)与SEQ ID NO:4所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; ( a2 ) Compared with the sequence shown in SEQ ID NO: 4, there are 1, 2 or 3 amino acid sequences of conservative mutations;
    (a 3)如SEQ ID NO:8所示的氨基酸序列; ( a3 ) the amino acid sequence shown in SEQ ID NO: 8;
    (a 4)与SEQ ID NO:8所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; ( a4 ) Compared with the sequence shown in SEQ ID NO: 8, there are 1, 2 or 3 amino acid sequences of conservative mutations;
    (a 5)如SEQ ID NO:12所示的氨基酸序列; ( a5 ) the amino acid sequence shown in SEQ ID NO: 12;
    (a 6)与SEQ ID NO:12所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; (a 6 ) Compared with the sequence shown in SEQ ID NO: 12, there are 1, 2 or 3 amino acid sequences of conservative mutations;
    所述重链可变区为根据IMGT的分析方法编码。The heavy chain variable region is encoded according to the analysis method of IMGT.
  2. 根据权利要求1所述的抗体或其抗原结合片段,其包含轻链可变区,其中,编码所述轻链可变区的序列包含如下所示序列中的一种或多种:The antibody or antigen-binding fragment thereof according to claim 1, comprising a light chain variable region, wherein the sequence encoding the light chain variable region comprises one or more of the following sequences:
    (b 1)如SEQ ID NO:3所示的氨基酸序列; (b 1 ) the amino acid sequence shown in SEQ ID NO: 3;
    (b 2)与SEQ ID NO:3所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; ( b2 ) Compared with the sequence shown in SEQ ID NO: 3, there are 1, 2 or 3 amino acid sequences of conservative mutations;
    (b 3)如SEQ ID NO:7所示的氨基酸序列; (b 3 ) the amino acid sequence shown in SEQ ID NO: 7;
    (b 4)与SEQ ID NO:7所示的序列相比,存在1个或2个保守突变的氨基酸序列; (b 4 ) Compared with the sequence shown in SEQ ID NO: 7, there are 1 or 2 amino acid sequences with conservative mutations;
    (b 5)如SEQ ID NO:11所示的氨基酸序列; (b 5 ) the amino acid sequence shown in SEQ ID NO: 11;
    (b 6)与SEQ ID NO:11所示的序列相比,存在1个、2个或3个保守突变的氨基酸序列; (b 6 ) Compared with the sequence shown in SEQ ID NO: 11, there are 1, 2 or 3 amino acid sequences of conservative mutations;
    所述轻链可变区为根据IMGT的分析方法编码。The light chain variable region is encoded according to the analysis method of IMGT.
  3. 根据权利要求1或2所述的抗体或其抗原结合片段,其包含重链可变区(VH)和轻链可变区(VL),所述轻链可变区(VL)包含VL互补决定区(CDR)1、VL互补决定区(CDR)2和VL互补决定区(CDR)3,所述重链可变区(VH)包含VH互补决定区(CDR)1、VH互补决定区(CDR)2和VH互补决定区(CDR)3;并且,The antibody or antigen-binding fragment thereof according to claim 1 or 2, comprising a heavy chain variable region (VH) and a light chain variable region (VL), the light chain variable region (VL) comprising a VL complementarity determination Region (CDR) 1, VL complementarity determining region (CDR) 2 and VL complementarity determining region (CDR) 3, the heavy chain variable region (VH) comprises VH complementarity determining region (CDR) 1, VH complementarity determining region (CDR) )2 and VH complementarity determining region (CDR)3; and,
    所述VL由如下氨基酸编码:VLCDR1包含如SEQ ID NO:3所示的氨基酸序列,VLCDR2包含如SEQ ID NO:7所示的氨基酸序列,VLCDR3包含如SEQ ID NO:11所示的氨基酸序列;The VL is encoded by the following amino acids: VLCDR1 contains the amino acid sequence shown in SEQ ID NO: 3, VLCDR2 contains the amino acid sequence shown in SEQ ID NO: 7, and VLCDR3 contains the amino acid sequence shown in SEQ ID NO: 11;
    所述VH由如下氨基酸编码:VHCDR1包含如SEQ ID NO:4所示的氨基酸序列,VHCDR2包含如SEQ ID NO:8所示的氨基酸序列,VHCDR3包含如SEQ ID NO:12所示的氨基酸序列。The VH is encoded by the following amino acids: VHCDR1 contains the amino acid sequence shown in SEQ ID NO: 4, VHCDR2 contains the amino acid sequence shown in SEQ ID NO: 8, and VHCDR3 contains the amino acid sequence shown in SEQ ID NO: 12.
  4. 根据权利要求1-3任一项所述的抗体或其抗原结合片段,其中,编码所述抗体或其抗原结合片段包含如下所示序列中的一种或多种:The antibody or antigen-binding fragment thereof according to any one of claims 1-3, wherein the encoding of the antibody or antigen-binding fragment thereof comprises one or more of the following sequences:
    (i)VH包含如SEQ ID NO:16所示的氨基酸序列,和VL包含如SEQ ID NO:18所示的氨基酸序列;(i) VH comprises the amino acid sequence shown in SEQ ID NO: 16, and VL comprises the amino acid sequence shown in SEQ ID NO: 18;
    (ii)与(i)所示序列相比,存在保守突变的序列。(ii) Compared with the sequence shown in (i), there is a sequence of conservative mutations.
  5. 一种多核苷酸,其中,所述多核苷酸选自(a)-(d)中的任一项:A polynucleotide, wherein the polynucleotide is selected from any one of (a)-(d):
    (a)包含如SEQ ID NO:15、SEQ ID NO:17任一序列或其组合所示的核苷酸序列;(a) comprising a nucleotide sequence as shown in any sequence of SEQ ID NO: 15, SEQ ID NO: 17 or a combination thereof;
    (b)包含如SEQ ID NO:15、SEQ ID NO:17任一序列或其组合所示的核苷酸序列的反向互补序列的核苷酸序列;(b) a nucleotide sequence comprising the reverse complement of the nucleotide sequence shown in any one of SEQ ID NO: 15, SEQ ID NO: 17 or a combination thereof;
    (c)在高严格性杂交条件或非常高严格性杂交条件下,能够与(a)-(b)中的任一项所示的核苷酸序列杂交的序列的反向互补序列;(c) under high stringency hybridization conditions or very high stringency hybridization conditions, the reverse complement of the sequence capable of hybridizing to the nucleotide sequence shown in any one of (a)-(b);
    (d)与(a)-(c)中的任一项所示的核苷酸序列具有至少90%,可选至少95%,优选至少97%,更优选至少98%,最优选至少99%的序列同一性的序列。(d) has at least 90%, optionally at least 95%, preferably at least 97%, more preferably at least 98%, most preferably at least 99% of the nucleotide sequence shown in any one of (a)-(c) sequence of sequence identity.
  6. 一种载体,其中,所述载体包含根据权利要求5所述的多核苷酸。A vector, wherein the vector comprises the polynucleotide according to claim 5.
  7. 一种分离的宿主细胞,其中,所述宿主细胞包含如权利要求6所述的载体。An isolated host cell, wherein the host cell comprises the vector of claim 6.
  8. 一种制备稳定表达目标蛋白的宿主细胞的方法,其中,所述方法包含利用权利要求6所述的载体,转化初始宿主细胞的步骤。A method for preparing a host cell stably expressing a target protein, wherein the method comprises the step of using the vector according to claim 6 to transform the initial host cell.
  9. 一种制备目标蛋白的方法,所述方法包含利用权利要求7所述的宿主细胞或通过权利要求8所述的方法,制备所述目标蛋白。A method for preparing a target protein, the method comprising using the host cell according to claim 7 or the method according to claim 8 to prepare the target protein.
  10. 根据权利要求9所述的方法制备的抗体或其结合片段。The antibody or binding fragment thereof prepared according to the method of claim 9.
  11. 一种检测抗BP180抗体的方法,其中,所述方法包括使用权利要求1-4任一项或权利要求10所述的抗体或其抗原结合片段对待测样品进行检测的步骤;A method for detecting an anti-BP180 antibody, wherein the method comprises the step of using the antibody or antigen-binding fragment thereof according to any one of claims 1-4 or claim 10 to detect the sample to be tested;
    可选地,所述方法包括对待测样品中的抗BP180抗体进行定量的步骤。Optionally, the method includes the step of quantifying the anti-BP180 antibody in the sample to be tested.
  12. 一种试剂盒,其中,所述试剂盒包含根据权利要求1-4任一项或权利要求10所述的抗体或其抗原结合片段。A kit, wherein the kit comprises the antibody or antigen-binding fragment thereof according to any one of claims 1-4 or claim 10.
  13. 一种组合物,其中,所述组合物中含有根据权利要求1-4任一项或权利要求10所述的抗体或其抗原结合片段。A composition, wherein the composition contains the antibody or antigen-binding fragment thereof according to any one of claims 1-4 or claim 10.
  14. 根据权利要求1-4任一项或权利要求10所述的抗体或其抗原结合片段,或权利要求14所述的组合物在如下(1)-(4)至少一项中的用途:Use of the antibody or antigen-binding fragment thereof according to any one of claims 1-4 or claim 10, or the composition of claim 14 in at least one of the following (1)-(4):
    (1)检测抗BP180抗体,或制备用于检测抗BP180抗体的试剂或试剂盒;(1) Detecting anti-BP180 antibodies, or preparing reagents or kits for detecting anti-BP180 antibodies;
    (2)制备用于诊断大疱性类天疱疮的试剂或试剂盒;(2) Preparation of reagents or kits for diagnosing bullous pemphigoid;
    (3)制备用于监测大疱性类天疱疮的病情进展的试剂或试剂盒;(3) Preparation of reagents or kits for monitoring the progression of bullous pemphigoid;
    (4)制备用于研究大疱性类天疱疮的致病机理的试剂或试剂盒。(4) Preparation of reagents or kits for studying the pathogenic mechanism of bullous pemphigoid.
  15. 一种预防或治疗大疱性类天疱疮的方法,其中,使用根据权利要求1-4任一项或权利要求10所述的抗体或其抗原结合片段,或根据权利要求13所述的组合物给予受试者。A method for preventing or treating bullous pemphigoid, wherein the antibody or antigen-binding fragment thereof according to any one of claims 1-4 or claim 10, or the combination according to claim 13 is used administered to the subjects.
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