WO2018218083A1 - Anti-angiogenic adenovirus - Google Patents

Anti-angiogenic adenovirus Download PDF

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Publication number
WO2018218083A1
WO2018218083A1 PCT/US2018/034487 US2018034487W WO2018218083A1 WO 2018218083 A1 WO2018218083 A1 WO 2018218083A1 US 2018034487 W US2018034487 W US 2018034487W WO 2018218083 A1 WO2018218083 A1 WO 2018218083A1
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WIPO (PCT)
Prior art keywords
recombinant adenovirus
deletion
seq
cancer
adenovirus
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Ceased
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PCT/US2018/034487
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English (en)
French (fr)
Inventor
Christopher Larson
Tony R. REID
Bryan T. Oronsky
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Epicentrx Inc
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Epicentrx Inc
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Filing date
Publication date
Priority to CA3064892A priority Critical patent/CA3064892A1/en
Priority to US16/616,146 priority patent/US20200155625A1/en
Priority to KR1020197037967A priority patent/KR20200020723A/ko
Priority to MX2019014059A priority patent/MX2019014059A/es
Priority to AU2018271999A priority patent/AU2018271999A1/en
Priority to EP18806701.1A priority patent/EP3630959A4/en
Application filed by Epicentrx Inc filed Critical Epicentrx Inc
Priority to JP2019565334A priority patent/JP7245175B2/ja
Priority to CN201880051792.1A priority patent/CN111448309A/zh
Publication of WO2018218083A1 publication Critical patent/WO2018218083A1/en
Anticipated expiration legal-status Critical
Priority to JP2023037694A priority patent/JP2023063392A/ja
Ceased legal-status Critical Current

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P9/00Drugs for disorders of the cardiovascular system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K35/00Medicinal preparations containing materials or reaction products thereof with undetermined constitution
    • A61K35/66Microorganisms or materials therefrom
    • A61K35/76Viruses; Subviral particles; Bacteriophages
    • A61K35/761Adenovirus
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/395Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum
    • A61K39/39533Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum against materials from animals
    • A61K39/3955Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum against materials from animals against proteinaceous materials, e.g. enzymes, hormones, lymphokines
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/78Connective tissue peptides, e.g. collagen, elastin, laminin, fibronectin, vitronectin or cold insoluble globulin [CIG]
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
    • C12N15/86Viral vectors
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/48Hydrolases (3) acting on peptide bonds (3.4)
    • C12N9/50Proteinases, e.g. Endopeptidases (3.4.21-3.4.25)
    • C12N9/64Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue
    • C12N9/6421Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue from mammals
    • C12N9/6424Serine endopeptidases (3.4.21)
    • C12N9/6435Plasmin (3.4.21.7), i.e. fibrinolysin
    • CCHEMISTRY; METALLURGY
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    • C12N2710/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011Details
    • C12N2710/00032Use of virus as therapeutic agent, other than vaccine, e.g. as cytolytic agent
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N2710/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011Details
    • C12N2710/00041Use of virus, viral particle or viral elements as a vector
    • C12N2710/00043Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N2710/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011Details
    • C12N2710/10011Adenoviridae
    • C12N2710/10021Viruses as such, e.g. new isolates, mutants or their genomic sequences
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2710/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011Details
    • C12N2710/10011Adenoviridae
    • C12N2710/10311Mastadenovirus, e.g. human or simian adenoviruses
    • C12N2710/10332Use of virus as therapeutic agent, other than vaccine, e.g. as cytolytic agent
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2710/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011Details
    • C12N2710/10011Adenoviridae
    • C12N2710/10311Mastadenovirus, e.g. human or simian adenoviruses
    • C12N2710/10341Use of virus, viral particle or viral elements as a vector
    • C12N2710/10343Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Definitions

  • the Elb-19K insertion site comprises a deletion corresponding to nucleotides 1714-1916 of the Ad5 genome (SEQ ID NO: 1), or the first therapeutic transgene is inserted between nucleotides corresponding to 1713 and 1917 of the Ad5 genome (SEQ ID NO: 1).
  • the first therapeutic transgene is inserted between CTGACCTC (SEQ ID NO: 2) and TCACCAGG (SEQ ID NO: 3), e.g., the recombinant adenovirus comprises, in a 5' to 3' orientation, CTGACCTC (SEQ ID NO: 2), the first therapeutic transgene, and
  • the E3 insertion site comprises a deletion corresponding to the Ad5 dl309 E3 deletion. In certain embodiments, the E3 insertion site comprises a deletion corresponding to nucleotides 29773-30836 of the Ad5 genome (SEQ ID NO: 1), or the second therapeutic transgene is inserted between nucleotides corresponding to 29773 and 30836 of the Ad5 genome (SEQ ID NO: 1).
  • the invention provides a pharmaceutical composition comprising any of the foregoing recombinant adenoviruses and at least one pharmaceutically acceptable carrier or diluent.
  • the adenovirus comprises a polynucleotide deletion that results in an adenovirus comprising the sequence CTAGGACTG (SEQ ID NO: 23), AGTGCCCG (SEQ ID NO: 30), or TATTCCCG (SEQ ID NO: 31), which result from joining the two polynucleotide sequences that would otherwise flank the deleted polynucleotide sequence.
  • the adenovirus comprises a polynucleotide deletion that results in an adenovirus comprising the sequence TTCCGTGGCG (SEQ ID NO: 32), which results from joining the two polynucleotide sequences that would otherwise flank the deleted polynucleotide sequence.
  • the recombinant adenovirus may selectively replicate in a hyperproliferative cell.
  • any of the foregoing recombinant adenoviruses may selectively express endostatin and/or angiostatin in a hyperproliferative cell.
  • transgene refers to an exogenous gene or polynucleotide sequence.
  • therapeutic transgene refers to a transgene, which when replicated and/or expressed in or by the virus imparts a therapeutic effect in a target cell, body fluid, tissue, organ, physiological system, or subject.
  • the E3 deletion comprises a deletion of from about 500 to about 1824, from about 500 to about 1500, from about 500 to about 1000, from about 1000 to about 1824, from about 1000 to about 1500, or from about 1500 to about 1824 nucleotides adjacent the stop site of E3-gpl9K.
  • the E3 deletion comprises a deletion of about 1600 nucleotides adjacent the stop site of E3-gpl9K. e.g., the E3 deletion comprises a deletion of 1622 nucleotides adjacent the stop site of E3-gpl9K.
  • the E3 deletion comprises a deletion corresponding to nucleotides 29218-30839 of the Ad5 genome (SEQ ID NO: 1).
  • recombinantly modified enveloped or non-enveloped DNA and RNA viruses preferably selected from baculoviridiae, parvoviridiae, picornoviridiae, herpesviridiae, poxyiridae, or adenoviridiae.
  • a recombinantly modified virus is referred to herein as a "recombinant virus.”
  • a recombinant virus may, e.g., be modified by recombinant DNA techniques to be replication deficient, conditionally replicating, or replication competent, and/or be modified by
  • a recombinant adenovirus comprises a deletion of nucleotides corresponding to -76 to -68 of the adenovirus type 5 Ela promoter, which corresponds to nucleotides 423 to 431 of the Ad5 genome (SEQ ID NO: 1).
  • the adenovirus comprises a polynucleotide deletion that results in an adenovirus comprising the sequence TTCCGTGGCG (SEQ ID NO: 32), which results from joining the two polynucleotide sequences that would otherwise flank the deleted polynucleotide sequence.
  • An exemplary route of administration is IV infusion.
  • Useful formulations can be prepared by methods known in the pharmaceutical art. For example, see Remington's
  • compositions preferably are sterile. Sterilization can be
  • Exemplary dosing frequencies are once per day, once per week and once every two weeks.
  • a preferred route of administration is parenteral, e.g., intravenous infusion.
  • the recombinant adenoviruses disclosed herein can be used to treat various medical indications.
  • the recombinant adenoviruses can be used to treat cancers.
  • the cancer cells are exposed to a therapeutically effective amount of the recombinant adenovirus so as to inhibit or reduce proliferation of the cancer cells.
  • the invention provides a method of treating a cancer in a subject.
  • solid tumors include malignancies, e.g., sarcomas, adenocarcinomas, and carcinomas, of the various organ systems, such as those affecting head and neck (including pharynx), thyroid, lung (small cell or non-small cell lung carcinoma (NSCLC)), breast, lymphoid, gastrointestinal ⁇ e.g., oral, esophageal, stomach, liver, pancreas, small intestine, colon and rectum, anal canal), genitals and genitourinary tract ⁇ e.g., renal, urothelial, bladder, ovarian, uterine, cervical, endometrial, prostate, testicular), CNS ⁇ e.g., neural or glial cells, e.g., neuroblastoma or glioma), or skin ⁇ e.g., melanoma).
  • the cancer is selected from anal cancer, basal cell carcinoma, bladder cancer, bone cancer, brain cancer
  • the method comprises administering to the subject an effective amount of a recombinant adenovirus of the invention either alone or in a combination with another therapeutic agent to normalize vasculature in the subject.
  • administering an effective amount of a recombinant adenovirus to a subject increases blood flow and/or delivery of oxygen to a tumor in the subject by at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 80%, or at least 90%.
  • Vascular normalization can be assayed by methods known in the art, including, e.g., contrast enhanced ultrasound (e.g., dynamic contrast enhanced ultrasound) and FLT-PET.
  • angiogenesis-associated disorders include benign tumors, blood-borne tumors, obesity, primary hyperparathyroidism, secondary hype arathyroidism, tertiary
  • a nucleotide sequence encoding amino acid residues 1-19 of human plasminogen (corresponding to the signal peptide) followed by residues 97-549 of human plasminogen (corresponding to kringle domains 1-5) is cloned in to the modified Elb-19k region of the TAV-A19k plasmid. All human plasminogen amino acid residue numbers are relative to NCBI Reference Sequence: NP 000292.1, depicted herein as SEQ ID NO: 11.
  • the modified plasmid is hereafter referred to as the TAV-hAng plasmid, and any resulting viral particles produced therefrom are hereafter referred to as the TAV-hAng adenovirus.
  • the nucleotide sequence of the TAV-hAng plasmid in the Elb-19k region is as follows, where the flanking Elb-19k sequence including the Sail and Xhol restriction sites is underlined:
  • the modified plasmid is hereafter referred to as the TAV-Endo-IRES-Ang plasmid, and any resulting viral particles produced therefrom are hereafter referred to as the TAV-Endo-IRES-Ang adenovirus.
  • the nucleotide sequence of the TAV-Endo-IRES-Ang plasmid in the Elb-19k region is as follows, where the coding regions are capitalized, the IRES is lowercase, and the flanking Elb-19k sequence including the Sail and Xhol restriction sites is underlined:
  • mice Surprisingly for an anti-angiogenic treatment, certain mice showed complete remission in tumor volume, rather than merely a delay in tumor growth. These results are particularly surprising because the effects of bevacizumab are cytostatic rather than cytotoxic.

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PCT/US2018/034487 2017-05-24 2018-05-24 Anti-angiogenic adenovirus Ceased WO2018218083A1 (en)

Priority Applications (9)

Application Number Priority Date Filing Date Title
US16/616,146 US20200155625A1 (en) 2017-05-24 2018-05-24 Anti-angiogenic adenovirus
KR1020197037967A KR20200020723A (ko) 2017-05-24 2018-05-24 항혈관신생 아데노바이러스
MX2019014059A MX2019014059A (es) 2017-05-24 2018-05-24 Adenovirus antiangiogenico.
AU2018271999A AU2018271999A1 (en) 2017-05-24 2018-05-24 Anti-angiogenic adenovirus
EP18806701.1A EP3630959A4 (en) 2017-05-24 2018-05-24 ANTI-ANGIOGENIC ADENOVIRUS
CA3064892A CA3064892A1 (en) 2017-05-24 2018-05-24 Anti-angiogenic adenovirus
JP2019565334A JP7245175B2 (ja) 2017-05-24 2018-05-24 抗脈管形成アデノウイルス
CN201880051792.1A CN111448309A (zh) 2017-05-24 2018-05-24 抗血管生成的腺病毒
JP2023037694A JP2023063392A (ja) 2017-05-24 2023-03-10 抗脈管形成アデノウイルス

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US201762510647P 2017-05-24 2017-05-24
US62/510,647 2017-05-24
US201762514351P 2017-06-02 2017-06-02
US62/514,351 2017-06-02

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WO2018218083A1 true WO2018218083A1 (en) 2018-11-29

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PCT/US2018/034487 Ceased WO2018218083A1 (en) 2017-05-24 2018-05-24 Anti-angiogenic adenovirus

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US (1) US20200155625A1 (enExample)
EP (1) EP3630959A4 (enExample)
JP (2) JP7245175B2 (enExample)
KR (1) KR20200020723A (enExample)
CN (1) CN111448309A (enExample)
AU (1) AU2018271999A1 (enExample)
CA (1) CA3064892A1 (enExample)
MX (1) MX2019014059A (enExample)
WO (1) WO2018218083A1 (enExample)

Cited By (7)

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CN110295195A (zh) * 2019-06-26 2019-10-01 浙江理工大学 靶向肝癌的溶瘤腺病毒gd55-gsdme的构建和应用
US11077156B2 (en) 2013-03-14 2021-08-03 Salk Institute For Biological Studies Oncolytic adenovirus compositions
US11130968B2 (en) 2016-02-23 2021-09-28 Salk Institute For Biological Studies High throughput assay for measuring adenovirus replication kinetics
WO2021248101A1 (en) * 2020-06-05 2021-12-09 Epicentrx, Inc. Mono- and multi-valent sars-cov-2 adenoviral vector vaccines and sars-cov-2 immune globulin and methods of use
US11401529B2 (en) 2016-02-23 2022-08-02 Salk Institute For Biological Studies Exogenous gene expression in recombinant adenovirus for minimal impact on viral kinetics
US11813337B2 (en) 2016-12-12 2023-11-14 Salk Institute For Biological Studies Tumor-targeting synthetic adenoviruses and uses thereof
US12365878B2 (en) 2018-04-09 2025-07-22 Salk Institute For Biological Studies Oncolytic adenovirus with enhanced replication properties comprising modifications in E1A, E3, and E4

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EA201990822A1 (ru) 2017-04-12 2020-01-09 Эписентарикс, Инк. Иммуномодулирующие слитые белки
CN115120744B (zh) * 2021-03-24 2025-01-28 四川大学 重组人内皮抑素腺病毒与抗pd-1抗体或抗pd-l1抗体在制备抗肿瘤药物中的用途
CN114931634B (zh) * 2022-03-18 2023-03-17 广州达博生物制品有限公司 E10a与pd1单抗对肿瘤的联合治疗方法和制药用途

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WO2002088173A2 (en) * 2001-04-30 2002-11-07 Cell Genesys, Inc. Viral-mediated delivery and in vivo expression of polynucleotides encoding anti-angiogenic proteins
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