WO2015070765A1 - Rnai-based pest control method using irrigation, and application thereof - Google Patents

Rnai-based pest control method using irrigation, and application thereof Download PDF

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WO2015070765A1
WO2015070765A1 PCT/CN2014/090946 CN2014090946W WO2015070765A1 WO 2015070765 A1 WO2015070765 A1 WO 2015070765A1 CN 2014090946 W CN2014090946 W CN 2014090946W WO 2015070765 A1 WO2015070765 A1 WO 2015070765A1
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dsrna
seq
sequence
plant
gene
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Chinese (zh)
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苗雪霞
李海超
关若冰
郭惠民
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中国科学院上海生命科学研究院
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    • AHUMAN NECESSITIES
    • A01AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01NPRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
    • A01N57/00Biocides, pest repellants or attractants, or plant growth regulators containing organic phosphorus compounds
    • A01N57/10Biocides, pest repellants or attractants, or plant growth regulators containing organic phosphorus compounds having phosphorus-to-oxygen bonds or phosphorus-to-sulfur bonds
    • A01N57/16Biocides, pest repellants or attractants, or plant growth regulators containing organic phosphorus compounds having phosphorus-to-oxygen bonds or phosphorus-to-sulfur bonds containing heterocyclic radicals
    • AHUMAN NECESSITIES
    • A01AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01NPRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
    • A01N63/00Biocides, pest repellants or attractants, or plant growth regulators containing microorganisms, viruses, microbial fungi, animals or substances produced by, or obtained from, microorganisms, viruses, microbial fungi or animals, e.g. enzymes or fermentates
    • A01N63/60Isolated nucleic acids
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/113Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • C12N15/8218Antisense, co-suppression, viral induced gene silencing [VIGS], post-transcriptional induced gene silencing [PTGS]
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8271Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
    • C12N15/8279Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance
    • C12N15/8286Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance for insect resistance
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/10Type of nucleic acid
    • C12N2310/14Type of nucleic acid interfering N.A.
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/50Physical structure
    • C12N2310/53Physical structure partially self-complementary or closed
    • C12N2310/531Stem-loop; Hairpin
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A40/00Adaptation technologies in agriculture, forestry, livestock or agroalimentary production
    • Y02A40/10Adaptation technologies in agriculture, forestry, livestock or agroalimentary production in agriculture
    • Y02A40/146Genetically Modified [GMO] plants, e.g. transgenic plants

Definitions

  • the present invention is in the field of biotechnology and agricultural applications, and in particular, the invention relates to RNAi technology for controlling pests by irrigation and uses thereof.
  • RNA interference RNA interference
  • dsRNA double-stranded RNA
  • the first is to use the plant to express the dsRNA of the target pest target gene.
  • the dsRNA can be taken into the body to achieve the purpose of controlling the pest.
  • each crop has to face various diseases and insects. It is impossible for us to carry out transgenic operations on all crops to avoid the damage of many organisms.
  • the second is the mass production of double-stranded RNA preparations, which are sprayed like chemical pesticides to control pests.
  • this method is used for some drill-bit pests (such as rice aphids), underground pests, insects with waxy protective layers on some body walls (such as brown planthopper), or insects hidden in the back, cracks, etc. of plant leaves. It is difficult to be treated in the process of spraying, and the effect of prevention and control is not achieved.
  • the object of the present invention is to provide a preparation and application new technology for controlling sucking mouthparts and drill collar harmful insects based on RNAi technology.
  • a method of introducing a double-stranded RNA (dsRNA) into a plant comprising the steps of: applying said double-stranded RNA to a root of a plant through which the root of the double-stranded RNA is absorbed The action is such that the double-stranded RNA is inhaled by the plant and transported to a portion of the plant other than the root.
  • dsRNA double-stranded RNA
  • the double-stranded DNA includes insect-resistant double-stranded DNA.
  • a method for improving insect resistance of a plant comprising the steps of: applying a pest-resistant double-stranded RNA (dsRNA) to a root of a plant such that the insect-resistant double-stranded RNA is the plant
  • dsRNA pest-resistant double-stranded RNA
  • the plant portion other than the root portion includes stems, branches, leaves, flowers, fruits, or a combination thereof.
  • the delivery is carried out in the body of the plant.
  • the insect-resistant dsRNA is 50-2000 bp in length, preferably 100-1000 bp in length.
  • the insect-resistant dsRNA is administered at a concentration of 0.0001 to 5 mg/ml, preferably 0.001 to 1 mg/ml.
  • the portion of the plant other than the root is the upper 3/4 portion of the plant ground or surface portion. It is preferably the upper 2/3 part.
  • the insect-resistant dsRNA is a dsRNA directed against an insect growth-related gene.
  • insect growth-related genes include the rice planthopper P450 gene (Cyp18A1), the rice locust carboxylasease (Ces), or the Asian corn borer K-serine protease inhibitor gene (KPIs). ).
  • the insect comprises Lepidoptera, Hemiptera, Diptera.
  • the rice planthopper P450 (Cyp18A1) gene fragment sequence is set forth in SEQ ID NO.
  • the sequence of the carboxylesterase (Ces) gene fragment is shown in SEQ ID NO.
  • KPIs K-type serine protease inhibitor gene sequence of the Asian corn borer is shown in SEQ ID NO.
  • the dsRNA is represented by SEQ ID NOs.: 4-6.
  • the means of application includes irrigation, soaking, watering, drip irrigation.
  • the insect resistance comprises an anti-herbarian pest.
  • the herbivorous pest includes a sucking mouthparts pest, a chewing pest, a drill collar pest, and a ground pest.
  • the sucking mouthparts pest comprises rice brown planthopper, whitebacked planthopper or Laodelphax striatellus.
  • the drill collar pest comprises Asian corn borer, European corn borer or peach aphid.
  • the plant comprises a dicot, a monocot, or a gymnosperm.
  • the plant comprises a gramineous plant, a leguminous plant, a cruciferous plant, a solanaceous plant, and a cucurbitaceae plant.
  • the gramineous plant comprises corn, rice, barley, wheat, oats, sorghum, rye.
  • the legumes include soybeans, peanuts, broad beans, peas, red beans, mung beans, cowpeas, green beans, and lentils.
  • the cruciferous plant includes green vegetables, Chinese cabbage, cauliflower, radish, and kale.
  • a third aspect of the invention provides an agricultural composition comprising a pesticidally effective amount of an insect resistant double-stranded RNA and a pesticidally acceptable carrier.
  • the agricultural composition is applied to the root of the plant.
  • the dsRNA is administered at a concentration of 0.0001 to 5 mg/g or 0.0001-5 mg/ml, preferably 0.001 to 1 mg/ml or 0.001-1 mg/g.
  • the dsRNA is applied at a concentration of 0.01 to 5 mg/g or 0.01 to 5 mg/ml, preferably 0.1 to 1 mg/ml or 0.1 to 1 mg/g.
  • the agricultural composition is in a liquid or solid state.
  • the pharmaceutically or agrochemically acceptable carrier comprises water, a synergist, a surfactant or a stabilizer.
  • the agricultural composition further comprises an RNA stabilizer.
  • the RNA stabilizer comprises a solvent such as cyanogenic hydrochloride, an RNA protectant, deionized formamide or the like.
  • RNA sequence for the preparation of a composition for enhancing the insect resistance of a plant by root application.
  • an isolated polynucleotide is provided, the polynucleotide being selected from the group consisting of:
  • the dsRNA of the strand complementary to any of the polynucleotide sequences can be taken up by the roots of the plant after irrigation, soaking, watering or drip irrigation, and is inhibited by the herbivorous pests. The activity of the growth of herbivorous pests.
  • the inhibiting the growth activity of the herbivorous pest comprises inducing or causing the death of the herbivorous pest.
  • a dsRNA construct is provided, the construct of the dsRNA is double stranded, and the positive or negative strand thereof comprises the structure of formula I:
  • a nucleotide sequence Seq forward growth-related genes or fragments of phytophagous insects
  • Seq reverses to a nucleotide sequence that is substantially complementary to the Seq forward ;
  • X is a spacer sequence located between the forward and Seq Seq the reverse, and the spacer sequence Seq Seq forward and reverse are not complementary,
  • the plant-borne pest growth-related gene is selected from the group consisting of: a rice planthopper P450 gene (Cyp18A1), a rice locust carboxylasease (Ces), or an Asian corn borer K-serine protease inhibitor gene (KPIs). ).
  • the herbivorous pest comprises a sucking mouthparts pest or a drill collar pest.
  • the dsRNA construct can form a dsRNA of Formula II,
  • Seq 'Forward Forward sequence corresponds to Seq RNA sequences or fragments of sequences
  • Seq' reverse is a sequence that is substantially complementary to the Seq' forward ;
  • the Seq forward and Seq inverse lengths are at least 50 bp.
  • the spacer sequence X' has a length of 0-300 bp.
  • an expression vector comprising the dsRNA construct of the sixth aspect of the invention is provided.
  • a genetically engineered host cell comprising the expression vector of the seventh aspect of the invention or the integration of the dsRNA corresponding to the sixth aspect of the invention in the host cell is provided.
  • the DNA sequence of the object is provided.
  • the host cell is a plant cell, preferably a maize cell or a rice cell.
  • a dsRNA sequence which is an insect resistant dsRNA and which is 100-800 bp in length, preferably 150-600 bp in length.
  • the sequence of the dsRNA is derived from a species selected from the group consisting of agricultural or forest pests or vegetable pests.
  • the species comprises the Asian corn borer of the Lepidoptera family and the rice brown planthopper of the Homoptera family.
  • the dsRNA sequence is synthetic or artificially produced.
  • the "derived from” means that the dsRNA has a homology (identity) to the nucleotide sequence of the target gene in the pest of 95-100%, preferably 99. -100%.
  • the target gene is specific to the pest.
  • sequence of the dsRNA is selected from the group consisting of SEQ ID NOs.: 4-6; or a dsRNA of ⁇ 50 bp in length.
  • a method for controlling pests which comprises applying the agricultural composition of the third aspect of the invention or the dsRNA of the ninth aspect of the invention to a plant in need of pest control, is provided.
  • Figure 1 shows that rice roots absorb dsRNA and down-regulate the expression of related genes.
  • Figure 2 shows inhibition of brown planthopper related gene expression and lethality to brown planthopper.
  • Figure 3 shows the inhibition of Asian corn borer-related gene expression and the lethality rate of corn borer.
  • Figure 4 shows the stability and degradation rate of dsRNA.
  • Fig. 5 shows that the leaf surface at the distal end of the drip droplet after the dsRNA of the present invention was dripped on the surface of the rice leaf was observed 24 hours later, and the fluorescence phenomenon was also observed, and the gray portion in the figure was the displayed fluorescence.
  • Figure 6 shows the total RNA extracted by CK for the clear water treatment control; DS- is the total RNA extracted after 24 hours of immersion in different double-stranded RNA, and the arrow below it indicates that there is a specific band different from CK in the total RNA. It is the exogenous double-stranded dsRNA that the plant absorbs because there is no such specific band in all CK controls.
  • Figure 7 shows the extraction of total RNA from rice stems after immersion for 24 h in three different dsRNAs. After inversion into cDNA, the dsRNA fragment of the foreign gene was amplified, and the fragment with the same size as the target was obtained, but in the water control There is no strip in the middle.
  • the present inventors conducted extensive and intensive research to screen important genes during the growth and development of herbivorous pests, and unexpectedly found that the dsRNA targeting the rice planthopper P450 (Cyp18A1) gene as shown in SEQ ID NO: 4, such as SEQ dsRNA targeting the carboxylesterase (Ces) gene represented by ID NO: 5 and dsRNA targeting the K-type serine protease inhibitor (KPIs) gene of Asian corn borer as shown in SEQ ID NO: 6.
  • SEQ ID NO: 4 such as SEQ dsRNA targeting the carboxylesterase (Ces) gene represented by ID NO: 5
  • KPIs K-type serine protease inhibitor
  • the dsRNA can be made into an irrigation liquid, which is absorbed by the plant roots and leaves, and then ingested by the herbivorous pests to interfere with the target genes of the pests, inhibit the expression of the target genes, and finally lead to the drilling and sucking pests. Death, to achieve the purpose of pest control.
  • the dsRNA of the present invention can be simply formulated and applied: irrigation can achieve pest control effects.
  • the invention can use the dsRNA to carry out pest control without the need of transgenic cultivation of the plant, especially for pests hidden in the root leaves and stems which cannot be controlled by spraying pesticides.
  • substantially complementary means that the sequences of the nucleotides are sufficiently complementary to interact in a predictable manner, such as to form a secondary structure (eg, a stem-loop structure).
  • a secondary structure eg, a stem-loop structure.
  • two “basic At least 70% of the nucleotides of the complementary nucleotide sequences are complementary to each other; preferably, at least 80% of the nucleotides are complementary; more preferably, at least 90% of the nucleotides Compatible; further preferably, at least 95% of the nucleotides are complementary; such as 98%, 99% or 100%.
  • Glycosyl acid preferably, having up to 6 unmatched nucleotides; more preferably, having up to 5 unmatched nucleotides; further preferably, having up to 4 unmatched nucleotides, such as having 0 1, 2, 3, 4 unmatched nucleotides.
  • a "complementary" sequence generally refers to a sequence that converts a sequence in the 5'-3' direction to its 3'-5' direction (eg, 5'ATCG 3'->GCTA), and then takes its complementary sequence (such as GCTA ⁇ 5 'CGAT 3').
  • a “stem loop” structure also referred to as a “hairpin” structure, refers to a nucleic acid molecule that forms a secondary structure comprising a double-stranded region (stem), said double-stranded region Formed by two regions of the nucleic acid molecule (on the same molecule), the two regions are flanked by double-stranded portions; they also include at least one "loop" structure, including non-complementary nucleic acid molecules, ie, single-stranded regions. Even if the two regions of the nucleic acid molecule are not fully complementary, the double-stranded portion of the nucleic acid can remain in a double-stranded state.
  • insertions, deletions, substitutions, etc. may result in non-complementation of a small region or the formation of a stem-loop structure or other form of secondary structure by itself, however, the two regions may still be substantially complementary and are foreseeable Interaction occurs in the manner to form a double-stranded region of the stem-loop structure.
  • Stem loop structures are well known to those skilled in the art, and typically after obtaining a nucleic acid having a nucleotide sequence of a primary structure, one skilled in the art will be able to determine whether the nucleic acid is capable of forming a stem-loop structure.
  • a preferred stem-loop structure can be represented by a dsRNA of Formula II, X' is a spacer sequence located between the Seq' forward and Seq' inversions , and the spacer sequence is Seq' forward and Seq ' Reverse non-complementary, when X' is absent, the dsRNA of Formula II is a complementary double-stranded RNA structure formed by Seq' forward and Seq' reverse .
  • nucleic acid inhibitor refers to a class of target genes (fragments) useful in the control of herbivorous pests or fragments or truncated forms thereof, which are obtained by controlling the activity of herbivorous pests.
  • the "nucleic acid inhibitor” is, for example, some interfering molecule, including dsRNA (also known as double-stranded RNA, double-stranded ribonucleic acid or double-stranded ribonucleotide sequence), antisense nucleic acid, small interfering RNA, microRNA, and the like. Or a construct that can express or form the dsRNA, antisense nucleic acid, small interfering RNA or microRNA.
  • the nucleic acid inhibitor is preferably a dsRNA.
  • operably linked refers to a spatial arrangement of the functionality of two or more nucleic acid regions or nucleic acid sequences.
  • the promoter region is placed at a specific position relative to the nucleic acid sequence of the gene of interest such that transcription of the nucleic acid sequence is directed by the promoter region such that the promoter region is “operably linked” to the nucleic acid sequence.
  • an RNA sequence corresponding to a DNA sequence refers to an RNA sequence which is "AU” if the DNA sequence is "AT”.
  • RNA interference RNA interference
  • RNA interference means that some small double-stranded RNA can efficiently and specifically block the expression of specific genes in the body, promote mRNA degradation, and induce cell expression. A phenotype of a specific gene deletion is also known, which is also referred to as RNA intervention or RNA interference. RNA interference is a highly specific mechanism of gene silencing at the mRNA level.
  • small interfering RNA or "dsRNA” refers to a short-segment double-stranded RNA molecule that is capable of degrading specific mRNAs with mRNAs of homologous complementary sequences. This process is RNA. RNA interference pathway.
  • the basic principle of the RNA interference is to prepare the interfering RNA as an irrigation liquid, and after the plants are watered according to the conventional irrigation method, the insects are subjected to small interfering RNA (siRNA) or dsRNA which may interfere with the expression of the gene. Plants, thereby inducing the death of insects.
  • siRNA small interfering RNA
  • dsRNA small interfering RNA
  • an intron sequence is ligated to the complementary gene sequence at both ends, and after introduction into the cell, a "stem-loop" structure can be produced, and the "stem”-like portion can be processed into an insect body.
  • Small RNA of about 21-25 nt, this small RNA can effectively inhibit the expression of the target gene.
  • a preferred interfering RNA is a dsRNA.
  • a dsRNA is a double-stranded RNA sequence formed by a positive strand and its complementary strand. Among them, the positive and negative chains can be completely matched or partially matched.
  • a preferred dsRNA has dsDNA as shown in the formula II.
  • the length of the dsRNA sequence is not particularly limited, and is usually 100-800 bp in length, preferably 150-600 bp.
  • the sequence of the dsRNA is derived from a species selected from the group consisting of agricultural or forest pests or vegetable pests.
  • the species comprises the Asian corn borer of the Lepidoptera family and the rice brown planthopper of the Homoptera family.
  • the dsRNA sequence is synthetic or artificially produced.
  • the "derived from” means that the dsRNA has a homology (identity) to the nucleotide sequence of the target gene in the herbivorous pest of 95-100%, preferably It is 99-100%.
  • the target gene is unique to the herbivorous pest.
  • sequence of the dsRNA is selected from the group consisting of SEQ ID NOs.: 4-6; or a dsRNA of ⁇ 50 bp in length.
  • the terms "insect growth related gene”, “phytophagous pest growth related gene” are used interchangeably and refer to a gene related to insect growth mainly in plants (especially crops). “Growth-related” means that low or no expression of the gene will cause abnormalities in the growth, development, metabolism, reproduction, etc. of the insect, and even lead to the death of the insect.
  • the herbivorous pest growth-related gene comprises a P450 gene (Cyp18A1), a carboxylesterase (Ces), or a K-serine protease inhibitor of Asian corn borer. Genes (KPIs).
  • “Insect growth related genes” are those genes closely related to insect growth. For example, in the P450 gene, many of them participate in the detoxification of foods. Once the expression of such genes is inhibited, insect poisoning is caused.
  • Esterase is an important detoxifying enzyme system in insects. It can reduce the toxicity of toxic compounds by hydrolyzing ester bonds of ester toxic compounds or by combining with lipophilic toxic compounds to reduce their effective concentration.
  • Many insecticides are ester compounds containing ester bonds, such as organophosphorus, carbamate and pyrethroid pesticides. Esterases also play important roles in insect resistance, such as carboxylesterases. Therefore, interfering with the expression of esterase in insects can not only reduce its detoxification ability, but also prevent its resistance.
  • Protease inhibitors are a class of substances that inhibit protease activity. Serine protease inhibitors can regulate a variety of physiological reactions in the body, inhibit the catalytic action of the enzyme, prevent the conversion of the zymogen into an active enzyme, and therefore affect the normal insects. Growth and development.
  • the dsRNA designed for the P450 gene (Cyp18A1) fragment and the carboxylesterase (Ces) fragment is used to soak the rice roots and then the plant organs other than the soaking part are fed to the brown planthopper, corresponding genes.
  • Expression was down-regulated (Fig. 2a, 2b); the mortality of brown planthopper after 5 days of feeding on the corresponding dsRNA-treated rice was 26.67% and 48.33%, respectively (Fig. 2c).
  • the expression of this gene was significantly down-regulated by feeding dsRNAs designed for K-serine protease inhibitor gene (KPIs) fragments to Asian corn borer after watering the maize (Fig. 3a).
  • KPIs K-serine protease inhibitor gene
  • the preferred fragment of the herbivorous pest growth-related gene of the present invention has a length of at least 50 bp, and may be, for example, 60 bp, 80 bp, 100 bp, 200 bp, 500 bp, or 1000 bp.
  • the gene may be a full-length gene or a gene fragment when used in the present invention, preferably, the dsRNA of the P450 gene (Cyp18A1) against rice planthopper is as shown in SEQ ID NO: 4; the carboxylic acid against rice planthopper The dsRNA of the esterase gene (Ces) is shown in SEQ ID NO: 5; the dsRNA of the K-type serine protease inhibitor gene (KPIs) against Asian corn borer is shown in SEQ ID NO: 6.
  • the present invention also provides a dsRNA directed against a non-insect-derived EYFP gene, the sequence of which is set forth in SEQ ID NO: 7. Compared with the rice planthopper P450 gene, the carboxylesterase gene and the Asian corn borer K-serine protease inhibitor gene, the EYFP gene is not effective.
  • the present invention provides a dsRNA for a herbivorous pest growth-related gene, which can be irrigated by the dsRNA to irrigate the root of the crop and absorbed through the root of the plant, and the insect is inhibited from growth and a large number of deaths are observed after the crop having absorbed the dsRNA.
  • the dsRNA construct of the present invention is represented by Formula I, and the dsRNA is represented by Formula II, and the length of the spacer sequence X or X' employed is not particularly limited as long as it forms a construct with a forward sequence and a reverse sequence.
  • the dsRNA represented by Formula II can be formed.
  • the spacer sequence of the present invention has a length of 80 to 300 bp; more preferably 100 to 250 bp.
  • the construct expressing the herbivorous pest growth-related gene dsRNA is introduced into a host, and the host may be a plant cell, a tissue or an organ, and the construct may be expressed in a plant.
  • the insect gene dsRNA, dsRNA is processed into siRNA. Generally, the length of the siRNA is about 21-25 nt.
  • the construct is located on an expression vector.
  • the present invention also encompasses a vector comprising the construct.
  • the expression vector typically also contains a promoter, an origin of replication, and/or a marker gene, etc., operably linked to the construct.
  • Methods well known to those skilled in the art can be used to construct the expression vectors required for the present invention. These methods include in vitro recombinant DNA techniques, DNA synthesis techniques, in vivo recombinant techniques, and the like.
  • the expression vector preferably comprises one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as kalatinmycin, gentamicin, hygromycin, ampicillin resistance.
  • Vectors comprising the appropriate gene sequences described above, as well as appropriate promoters or control sequences, can be used to transform a suitable host.
  • the host may be any host suitable for carrying the expression vector and capable of delivering the expression vector to a plant cell.
  • the host is Agrobacterium.
  • the herbivorous pests exemplified in the examples of the present invention are Asian corn borer and rice planthopper.
  • the present invention is not particularly limited to insects suitable for use in the present invention, and the insect may be any herbivorous pest that can feed on plants, such as lepidopteran, hemipteran, Homoptera or Diptera insects.
  • the present invention is not particularly limited to plants suitable for use in the present invention, and may be various common economic crops. Or ornamental plants, such as Gramineae, Cruciferae, Leguminosae, etc., preferably corn or rice.
  • the P450 (Cyp18A1) gene fragment of rice planthopper is shown in SEQ ID NO. 1; the carboxylesterase (Ces) gene fragment of rice planthopper is shown in SEQ ID NO. 2: the type K of Asian corn borer
  • the full-length cDNA sequence of the serine protease inhibitor (KPIs) gene is shown in SEQ ID NO.
  • an interfering RNA fragment targeting the P450 gene is screened using the P450 gene of rice planthopper (Cyp18A1) as a target, and preferably, the dsRNA sequence of the P450 gene fragment is SEQ ID. NO: 4 (dsRNA1: dsCyp18A1).
  • an interfering RNA fragment directed against a carboxylesterase gene preferably the carboxylic acid
  • a carboxylesterase (Ces) gene as a target.
  • the dsRNA sequence of the esterase gene fragment is set forth in SEQ ID NO: 5 (dsRNA2: dsCes).
  • interfering RNA fragments targeting K-serine protease inhibitors are screened based on RNAi technology using K-type serine protease inhibitors (KPIs) genes of Asian corn borer as targets.
  • KPIs K-type serine protease inhibitors
  • the dsRNA sequence of the K-type serine protease inhibitor (KPIs) gene fragment is set forth in SEQ ID NO: 6.
  • the enhanced yellow fluorescent protein gene EYFP of jellyfish is used as a foreign gene control (SEQ ID NO.: 7) based on RNAi technology.
  • the dsRNA sequence of the EYFP gene fragment is set forth in SEQ ID NO: 41 (dsRNA: dsEYFP).
  • the nucleic acid inhibitor is a construct of a plurality of interfering molecules, eg, dsRNA, antisense nucleic acid, small interfering RNA or microRNA, or may express or form the dsRNA, antisense nucleic acid, small interfering RNA or micro RNA construct. More preferably, it is a dsRNA or a construct that can express the dsRNA.
  • constructs for expressing dsRNA, antisense nucleic acids, small interfering RNAs or microRNAs can be designed. Accordingly, the present invention provides an artificially constructed construct. Designing the constructs according to the genes provided by the present invention and their sequences is well known to those skilled in the art, and generally allows the construct to comprise an intron sequence (not complementary to the flanking sequences), ligated at both ends A complementary gene sequence that, when introduced into a cell, produces a "stem loop" structure, and the "stem” portion can form dsRNA, antisense nucleic acid, small interfering RNA or microRNA, such dsRNA, antisense nucleic acid, small interfering RNA or MicroRNAs are particularly effective in inhibiting the expression of genes of interest.
  • a preferred method for controlling the herbivorous pest of the present invention comprises directly irrigating or soaking the nucleic acid inhibitor for a subject (such as a plant) to be controlled to achieve the purpose of controlling a herbivorous pest.
  • the invention provides a dsRNA construct, the construct of the dsRNA is double stranded, and the positive or negative strand thereof comprises the structure of formula I:
  • a nucleotide sequence Seq forward growth-related genes or fragments of phytophagous insects
  • Seq reverses to a nucleotide sequence that is substantially complementary to the Seq forward ;
  • X is none, or is a sequence of intervals between the Seq forward and Seq reverse , and the interval sequence is not complementary to the Seq forward and Seq reverse ,
  • the plant-related pest growth-related genes are the P450 gene (Cyp18A1), the carboxylesterase (Ces), and the K-serine protease inhibitor gene (KPIs) of the Asian corn borer.
  • the Seq forward and Seq inverse lengths are at least 50 bp.
  • the dsRNA construct is taken up by the root of the crop and ingested by the herbivorous pest to form a dsRNA of the formula II.
  • Seq 'Forward Forward sequence corresponds to Seq RNA sequences or fragments of sequences
  • Seq' reverse is a sequence that is substantially complementary to the Seq' forward ;
  • the construct can also be located on an expression vector.
  • the present invention also encompasses a vector comprising the construct.
  • the expression vector typically also contains a promoter, an origin of replication, and/or a marker gene, etc., operably linked to the construct.
  • Methods well known to those skilled in the art can be used to construct the expression vectors required for the present invention. These methods include in vitro recombinant DNA techniques, DNA synthesis techniques, in vivo recombinant techniques, and the like.
  • the expression vector preferably comprises one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as kanamycin, gentamicin, hygromycin, ampicillin resistance .
  • Vectors comprising the appropriate gene sequences described above, as well as appropriate promoters or control sequences, can be used to transform a suitable host.
  • the host can be any host suitable for carrying the expression vector and capable of expressing a nucleic acid inhibitor.
  • the host is Escherichia coli, fungi, yeast, plant cells, animal cells, and the like.
  • Transformation of the host with recombinant DNA can be carried out using conventional techniques well known to those skilled in the art, depending on the type of plant.
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated by the CaCl 2 method, and the procedures used are well known in the art.
  • Another method is to use MgCl 2.
  • Conversion can also be carried out by electroporation if desired. Transformation of fungal and yeast cells, plant cells, animal cells is also well known to those skilled in the art.
  • a host carrying the construct or expression vector and capable of expressing a nucleic acid inhibitor can be directly administered to a subject (such as a plant) in need of control for the purpose of controlling a herbivorous pest.
  • the "stem"-like portion of the stem-loop structure described above is formed by the reverse interaction of Seq forward and Seq and can be processed to form a nucleic acid inhibitor.
  • the formed nucleic acid inhibitor has the following structure:
  • Seq' is positively selected from the RNA sequence or sequence fragment corresponding to the sequence shown in any one of SEQ ID NO: 1-3; and Seq' is reversed to a sequence substantially complementary to the Seq' forward .
  • X ' is positioned Seq' forward and Seq 'spacer sequence between the reverse, and the spacer sequence Seq' forward and Seq 'is not complementary to the reverse.
  • the X' sequence can be excised in vitro or not, and the dsRNA is processed and excised by an enzyme (such as nuclease Dicer) in the insect after it enters the insect body.
  • the invention also provides a composition comprising a dsRNA construct and/or dsRNA, and a pharmaceutically or agrochemically acceptable carrier.
  • the composition is a composition for interfering with the growth of a herbivorous pest, inducing or causing death of a herbivorous pest.
  • the dsRNA has the following sequence:
  • dsRNA1 as shown in SEQ ID NO.: 4;
  • dsRNA2 as shown in SEQ ID NO.: 5;
  • dsRNA3 as shown in SEQ ID NO.: 6;
  • the composition is an aqueous solution, typically having a pH of from about 5 to about 8, preferably a pH of from about 6 to about 8.
  • carrier includes various excipients and diluents. Such carriers include, but are not limited to, water, saline, buffer, dextrose, glycerol, ethanol, and combinations thereof.
  • the composition of the present invention can be directly irrigated or watered to a crop organ, wherein the organ includes roots, stems, leaves, flowers, and fruits of the plant; in addition, organs of the plant can be immersed in the composition of the present invention to achieve
  • the composition of the invention is absorbed by plants.
  • the agricultural composition of the present invention is formulated or added to an irrigation liquid and irrigated at the root of the plant, so that the dsRNA of the present invention is absorbed through the roots and brought to the non-irrigated portion, thereby allowing the pest to feed the non-irrigated portion of the plant. After that, growth inhibition or death occurs to achieve the insect resistance of the plant.
  • compositions of the present invention are prepared by a conventional method.
  • the composition is made under sterile or RNase free conditions.
  • the plant-feeding pest growth-related gene is derived from the P450 gene (Cyp18A1), the carboxylesterase (Ces), and the K-serine protease inhibitor gene (KPIs) of Asian corn borer;
  • the insect is a sucking mouthparts pest or a borer pest, preferably from a herbivorous pest, preferably from rice brown planthopper and Asian corn borer.
  • the present invention applies a dsRNA preparation of an effective target gene to a field pest control simply by irrigation or soaking, so that the plant can effectively absorb the dsRNA of the present invention and a composition thereof, thereby avoiding complicated transgenic operation of all crops. ;
  • the present invention performs high-throughput screening of herbivorous pest target genes for sucking, drilling, and underground pests;
  • the present invention solves the problem of resistance that may occur during pest control through the rotation and mixing application of the target;
  • the dsRNA preparation of the present invention has relative stability and ensures the function of playing an insecticide during the growth period of the crop;
  • the dsRNA preparation of the present invention can be rapidly reduced after the crop growth period Solution, with good bio-safety and ecological safety.
  • the plant materials used in this study were rice variety Zhonghua 11 (ZH11, purchased from China Rice Research Institute) and corn variety Zhengdan 958 (ZD958, purchased from Henan Agricultural Science Research Institute). Rice seeds were sown in a cylindrical plastic cup 10 cm high and 5 cm in diameter; corn seeds were sown in a 15 cm cylindrical plastic cup with a diameter of 10 cm. All plants are grown in a greenhouse after planting. The day/night temperature in the greenhouse is 28/22 ° C, the day/night cycle is 14/10 hours, and the relative humidity is 50-60%.
  • Rice brown planthopper and Asian corn borer were collected from Shanghai Songjiang Wuyi Farm.
  • the brown planthopper population was raised on the ZH11 rice variety planted above, and 2-3 instar nymphs were used for this experiment.
  • Asian corn borer is bred in a light incubator with artificial feed.
  • the incubator temperature was 25 ° C
  • the day/night cycle was 14/10 hours
  • the relative humidity was 75%.
  • the corn carp feeding formula is: corn poulte 120.0 g, corn flour 32.0 g, soybean powder 120.0 g, vitamin C 4.0 g, agar 12.0 g, yeast powder 72 g, sorbic acid 4.0 g, glucose 60.0 g, formaldehyde 1.6 ml, water 1 liter .
  • RNA samples with a total of ⁇ 6ug and OD260/280 of 1.8-2.2.
  • the mRNA with polyA was isolated using magnetic beads with oligo-dT, and then the first strand of cDNA was synthesized using a random hexamer and Invitrogen's Superscript II reverse transcriptase kit.
  • the above-prepared cDNA was used as a template to amplify the genes listed in the table, and the obtained gene fragment was purified, ligated into pMD18-T vector (Takara), and transformed into E. coli Top10 strain, blue-white spot screening, positive strain sequencing, used as a template for dsRNA synthesis after correct testing.
  • the target gene sequence of the synthetic dsRNA was amplified and sequenced using a primer with a T7 adaptor (Table 2), and the dsRNA was synthesized and purified using a MEGAscript RNAi kit (Ambion, Huntingdon, UK).
  • the dsRNA template was amplified using the dsRNA primers in Table 2, and the product was cut into gels.
  • OPTIONAL repeat step (7);
  • EYFP is an enhanced yellow fluorescent protein gene as a foreign gene control.
  • This experiment uses blank (CK), dsRNA of the present invention (SEQ ID NOs.: 4-6), dsRNA of rice endogenous gene Actin (SEQ ID NO.: 40), and control exogenous dsRNA, dsEYFP (SEQ ID). NO.: 41)
  • CK blank
  • dsRNA of the present invention SEQ ID NOs.: 4-6
  • dsRNA of rice endogenous gene Actin SEQ ID NO.: 40
  • control exogenous dsRNA dsEYFP
  • a. blank control group recorded as CK, this control is planted (rice or corn), the same method of planting, the growth conditions are the same, but not treated with dsRNA solution, as in the present invention, the rice is soaked with water, Corn is irrigated with clear water;
  • the dsRNA of the present invention a dsRNA (dsCyp18A1), a carboxylesterase (Ces) dsRNA (dsCES), or a K-serine endogenously expressed in Asian corn borer, which is endogenously expressed by the brown planthopper, P450 gene (Cyp18A1)
  • dsKPI dsRNA of the protease inhibitor gene
  • KPIs dsRNA expression of the stems of the dsCES, dsCyp18A1, and dsKPI of the present invention after root absorption is measured;
  • EYFP enhanced yellow fluorescent protein
  • dsEYFP dsEYFP
  • Victoria multi-tube jellyfish The enhanced yellow fluorescent protein (EYFP) dsRNA (dsEYFP) of Victoria multi-tube jellyfish is used to irrigate or soak the roots of plants to determine the expression of dsRNA in stems.
  • CK is the total RNA extracted from the water treatment control
  • DS- is the total RNA extracted from the stem after irrigation or soaking the roots of the plants for 24 hours with different double-stranded RNA
  • the arrow below it indicates that there is A specific band different from CK is the exogenous double-stranded dsRNA that the plant absorbs because there is no such specific band in all CK controls.
  • Figure 7 shows that after soaking rice with three different dsRNAs such as dsCYP18A1; dsCes; dsEYFP for 24h, the total RNA was extracted from the stem of rice, and then inverted into cDNA, the dsRNA fragment of the foreign gene was amplified, and the result was obtained. Fragments of consistent size, but no bands in the clear water control.
  • the dsRNA of the present invention was spotted on the surface of rice leaves, and it was found that after 24 hours, the leaf surface at the distal end of the drip was observed, and fluorescence phenomenon was also observed, indicating that the dsRNA of the present invention can be absorbed by the foliage of the plant. ( Figure 5)
  • Fluorescently labeled exogenous dsRNA can be absorbed into the stem of plants by plant organs, especially roots.
  • the dsRNA of the plant gene itself can be absorbed by roots and affect the growth of plants, while the dsRNAs for insect growth in the present invention are also Both can be absorbed by plant organs, especially the roots, and transported to the stems of plants. And leaves can also transport dsRNA.
  • exogenous dsRNA can be absorbed into the interior of the plant through organs of the plant, such as roots, leaves, and the like.
  • Example 4 Test for lethal effects of insects by exogenous dsRNA absorbed by the roots.
  • dsRNA was used to simulate rice and maize, and its effects on insects were observed.
  • the gene expression of the samples was detected by qPCR.
  • the primers are shown in Table 3.
  • the sequence and gene source information of dsRNA are shown in Table 4. Shown.
  • the seeds of rice ZH11 were grown in the nutrient solution to the two-leaf stage.
  • the rice was transplanted into a 0.5 mg/ml dsRNA solution, and the rice roots were all immersed in the solution. After soaking for 24 hours, the soaked rice was obtained.
  • the dsRNA solution is a synthetic P450 gene (Cyp18A1) and or a carboxylesterase (Ces) dsRNA or dsEYFP (concentration of 0.5 mg/mL, respectively) expressed by the brown planthopper.
  • the Zhengdan 985 corn seed was planted in the nutrient mash.
  • the roots are irrigated with 0.5 mg/ml dsRNA solution.
  • the corn mash is connected, and each corn seedling is connected to the 2nd-instar corn mash.
  • the corn borer There are 10 larvae, and the corn borer mainly feeds on the corn leaf parts and the upper part of the stem, and does not penetrate into the soil to feed.
  • corn mash was taken to detect gene expression.
  • the dsRNA solution is a dsRNA or dsEYFP (concentration of 0.5 mg/mL) of K-type serine protease inhibitor gene (KPIs) endogenously expressed in synthetic Asian corn borer.
  • KPIs K-type serine protease inhibitor gene
  • the synthesized dsRNA was placed under 4 conditions of 4 ° C, natural light or shading, and the results showed that the dsRNA was stored at 4 ° C for 90 days, and no significant degradation was observed ( FIG. 4 a ). Partial degradation was observed at room temperature in the dark, and 50% of dsRNA was also detected at 90 days (Shading in Figures 4b and 4c). At room temperature, significant degradation began at 45 days, and dsRNA was not detected at 90 days (sunlight in Figures 4b and 4c). On the one hand, these results indicate that double-stranded RNA is a relatively stable preparation, which can ensure the stability of the storage of the preparation and play a role in a certain period of time after application. On the other hand, under light conditions, it can be degraded faster, thus not It will cause environmental pollution.

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Abstract

An RNAi method for control of growth-related genes of plant-eating pests and applications thereof, a dsRNA preparation and method for the use thereof.

Description

一种通过灌溉防治害虫的RNAi技术及其应用RNAi technology for controlling pests by irrigation and its application 技术领域Technical field
本发明属于生物技术和农业应用领域,具体地,本发明涉及用于通过灌溉防治害虫的RNAi技术及其应用。The present invention is in the field of biotechnology and agricultural applications, and in particular, the invention relates to RNAi technology for controlling pests by irrigation and uses thereof.
背景技术Background technique
大量的研究已经证明,利用RNA干扰(RNAi)技术可以实现害虫种类的专一性防治,因此,该技术的应用不会影响其他生物,是一种环境友好的害虫防治新策略。然而,该技术在实际应用中还存在一些问题,其中最主要的问题是如何将靶标基因的双链RNA(dsRNA)准确送到目标害虫体内。目前比较可行的方法有两种:A large number of studies have proved that the use of RNA interference (RNAi) technology can achieve the specific control of pest species. Therefore, the application of this technology will not affect other organisms, and it is an environmentally friendly new strategy for pest control. However, this technology still has some problems in practical applications. The most important problem is how to accurately deliver the double-stranded RNA (dsRNA) of the target gene to the target pest. There are two more feasible methods at present:
一是利用植物表达目标害虫靶基因的dsRNA,当害虫取食这种转基因植物时,可以将dsRNA摄入体内,从而达到防治害虫的目的。但是,在自然条件下,每种作物都要面对各种病、虫的侵害,我们不可能把所有的作物都进行转基因操作使其避免多种生物的为害。The first is to use the plant to express the dsRNA of the target pest target gene. When the pest feeds the transgenic plant, the dsRNA can be taken into the body to achieve the purpose of controlling the pest. However, under natural conditions, each crop has to face various diseases and insects. It is impossible for us to carry out transgenic operations on all crops to avoid the damage of many organisms.
二是大量生产双链RNA制剂,像化学杀虫剂一样进行喷洒来防治害虫。但是,这种方法对于一些钻蛀性害虫(如水稻螟虫等)、地下害虫、一些体壁具有蜡质保护层的昆虫(如褐飞虱),或者是隐藏在植物叶片背面、缝隙等处的昆虫,在喷雾的过程中很难被处理到,达不到防治的效果。The second is the mass production of double-stranded RNA preparations, which are sprayed like chemical pesticides to control pests. However, this method is used for some drill-bit pests (such as rice aphids), underground pests, insects with waxy protective layers on some body walls (such as brown planthopper), or insects hidden in the back, cracks, etc. of plant leaves. It is difficult to be treated in the process of spraying, and the effect of prevention and control is not achieved.
此外,对于刺吸式口器害虫,尤其是个体较小但繁殖速度较快的种类(如蚜虫、粉虱等),目前尚无较好的靶标基因筛选和应用技术。In addition, there are no good target gene screening and application techniques for sucking mouthparts pests, especially those with smaller individuals but faster reproduction speeds (such as aphids, whiteflies, etc.).
为了解决上述技术中存在的问题,本领域迫切需要开发一种易于施用、广泛有效的RNAi应用技术,尤其是针对钻蛀性及针刺式的害虫,从而达到防治害虫、保护作物的效果。In order to solve the problems in the above technology, there is an urgent need in the art to develop an RNAi application technology that is easy to apply and widely effective, especially for drill-bit and needle-punched pests, thereby achieving the effects of controlling pests and protecting crops.
发明内容Summary of the invention
本发明的目的在于提供一种基于RNAi技术,针对刺吸式口器及钻蛀性有害昆虫进行防治的制剂及应用新技术。The object of the present invention is to provide a preparation and application new technology for controlling sucking mouthparts and drill collar harmful insects based on RNAi technology.
本发明的第一方面,提供了一种将双链RNA(dsRNA)导入植物的方法,包括步骤:将所述的双链RNA施用于植物的根部,通过所述植物对双链RNA的根部吸收作用,使得所述双链RNA被所述植物吸入并输送到除根部之外的植株部分。In a first aspect of the invention, there is provided a method of introducing a double-stranded RNA (dsRNA) into a plant, comprising the steps of: applying said double-stranded RNA to a root of a plant through which the root of the double-stranded RNA is absorbed The action is such that the double-stranded RNA is inhaled by the plant and transported to a portion of the plant other than the root.
在另一优选例中,所述双链DNA包括抗虫性双链DNA。In another preferred embodiment, the double-stranded DNA includes insect-resistant double-stranded DNA.
本发明第二方面,提供了一种提高植物抗虫性的方法,包括步骤:将抗虫性双链RNA(dsRNA)施用于植物的根部,使得所述抗虫性双链RNA被所述植物根部吸收,并输送到除根部之外的植株部分,从而提高植物的抗虫性。According to a second aspect of the present invention, a method for improving insect resistance of a plant, comprising the steps of: applying a pest-resistant double-stranded RNA (dsRNA) to a root of a plant such that the insect-resistant double-stranded RNA is the plant The roots are absorbed and transported to parts of the plant other than the roots, thereby increasing the insect resistance of the plants.
在另一优选例中,所述的除根部之外的植株部分包括茎、枝、叶、花、果、或其组合。In another preferred embodiment, the plant portion other than the root portion includes stems, branches, leaves, flowers, fruits, or a combination thereof.
在另一优选例中,所述的输送是在植株体内进行输送。In another preferred embodiment, the delivery is carried out in the body of the plant.
在另一优选例中,所述的抗虫dsRNA的长度为50-2000bp,较佳地为100-1000bp。In another preferred embodiment, the insect-resistant dsRNA is 50-2000 bp in length, preferably 100-1000 bp in length.
在另一优选例中,所述的抗虫dsRNA的施用浓度为0.0001-5mg/ml,较佳地为0.001-1mg/ml。In another preferred embodiment, the insect-resistant dsRNA is administered at a concentration of 0.0001 to 5 mg/ml, preferably 0.001 to 1 mg/ml.
在另一优选例中,除根部之外的植株部分是植株地面或水面部分的上3/4部分, 较佳地是上2/3部分。In another preferred embodiment, the portion of the plant other than the root is the upper 3/4 portion of the plant ground or surface portion. It is preferably the upper 2/3 part.
在另一优选例中,所述的抗虫dsRNA是针对昆虫生长相关基因的dsRNA。In another preferred embodiment, the insect-resistant dsRNA is a dsRNA directed against an insect growth-related gene.
在另一优选例中,所述昆虫生长相关基因包括稻飞虱P450基因(Cyp18A1)、稻飞虱羧酸酯酶基因(carboxylesterase,Ces)、或亚洲玉米螟K型丝氨酸蛋白酶抑制剂基因(KPIs)。In another preferred embodiment, the insect growth-related genes include the rice planthopper P450 gene (Cyp18A1), the rice locust carboxylasease (Ces), or the Asian corn borer K-serine protease inhibitor gene (KPIs). ).
在另一优选例中,所述的昆虫包括鳞翅目、半翅目、双翅目昆虫。In another preferred embodiment, the insect comprises Lepidoptera, Hemiptera, Diptera.
在另一优选例中,所述稻飞虱P450(Cyp18A1)基因片段序列如SEQ ID NO.1所示。In another preferred embodiment, the rice planthopper P450 (Cyp18A1) gene fragment sequence is set forth in SEQ ID NO.
所述稻飞虱羧酸酯酶(carboxylesterase,Ces)基因片段序列如SEQ ID NO.2所示。The sequence of the carboxylesterase (Ces) gene fragment is shown in SEQ ID NO.
所述亚洲玉米螟的K型丝氨酸蛋白酶抑制剂(KPIs)基因序列如SEQ ID NO.3所示。The K-type serine protease inhibitor (KPIs) gene sequence of the Asian corn borer is shown in SEQ ID NO.
在另一优选例中,所述的dsRNA如SEQ ID NOs.:4-6所示。In another preferred embodiment, the dsRNA is represented by SEQ ID NOs.: 4-6.
在另一优选例中,所述的施用方式包括灌溉、浸泡、浇灌、滴灌。In another preferred embodiment, the means of application includes irrigation, soaking, watering, drip irrigation.
在另一优选例中,所述的抗虫包括抗植食性害虫。In another preferred embodiment, the insect resistance comprises an anti-herbarian pest.
在另一优选例中,所述的植食性害虫包括刺吸式口器害虫、咀嚼式害虫、钻蛀性害虫及地下害虫。In another preferred embodiment, the herbivorous pest includes a sucking mouthparts pest, a chewing pest, a drill collar pest, and a ground pest.
在另一优选例中,所述刺吸式口器害虫包括水稻褐飞虱、白背飞虱或灰飞虱。In another preferred embodiment, the sucking mouthparts pest comprises rice brown planthopper, whitebacked planthopper or Laodelphax striatellus.
在另一优选例中,所述钻蛀性害虫包括亚洲玉米螟、欧洲玉米螟或桃蛀螟。In another preferred embodiment, the drill collar pest comprises Asian corn borer, European corn borer or peach aphid.
在另一优选例中,所述的植物包括双子叶植物、单子叶植物、或裸子植物。In another preferred embodiment, the plant comprises a dicot, a monocot, or a gymnosperm.
在另一优选例中,所述的植物包括禾本科植物、豆科植物、十字花科植物、茄科植物及葫芦科植物。In another preferred embodiment, the plant comprises a gramineous plant, a leguminous plant, a cruciferous plant, a solanaceous plant, and a cucurbitaceae plant.
在另一优选例中,所述的禾本科植物包括玉米、水稻、大麦、小麦、燕麦、高粱、黑麦。In another preferred embodiment, the gramineous plant comprises corn, rice, barley, wheat, oats, sorghum, rye.
在另一优选例中,所述的豆科植物包括大豆、花生、蚕豆、豌豆、赤豆、绿豆、豇豆、四季豆和扁豆。In another preferred embodiment, the legumes include soybeans, peanuts, broad beans, peas, red beans, mung beans, cowpeas, green beans, and lentils.
在另一优选例中,所述的十字花科植物包括青菜、白菜、花菜、萝卜、甘蓝。In another preferred embodiment, the cruciferous plant includes green vegetables, Chinese cabbage, cauliflower, radish, and kale.
本发明第三方面提供了一种农用组合物,所述的农用组合物包括杀虫有效量的抗虫性双链RNA和农药学上可接受的载体。A third aspect of the invention provides an agricultural composition comprising a pesticidally effective amount of an insect resistant double-stranded RNA and a pesticidally acceptable carrier.
在另一优选例中,所述的农用组合物被施用于植物根部。In another preferred embodiment, the agricultural composition is applied to the root of the plant.
在另一优选例中,所述dsRNA的施用浓度为0.0001-5mg/g或0.0001-5mg/ml,较佳地为0.001-1mg/ml或0.001-1mg/g。In another preferred embodiment, the dsRNA is administered at a concentration of 0.0001 to 5 mg/g or 0.0001-5 mg/ml, preferably 0.001 to 1 mg/ml or 0.001-1 mg/g.
在另一优选例中,所述农用组合物中,dsRNA的施用浓度为0.01-5mg/g或0.01-5mg/ml,较佳地为0.1-1mg/ml或0.1-1mg/g。In another preferred embodiment, the dsRNA is applied at a concentration of 0.01 to 5 mg/g or 0.01 to 5 mg/ml, preferably 0.1 to 1 mg/ml or 0.1 to 1 mg/g.
在另一优选例中,所述的农用组合物为液态或固态。In another preferred embodiment, the agricultural composition is in a liquid or solid state.
在另一优选例中,所述药学或农药学上可接受的载体包括水、增效剂、表面活性剂或稳定剂。In another preferred embodiment, the pharmaceutically or agrochemically acceptable carrier comprises water, a synergist, a surfactant or a stabilizer.
在另一优选例中,所述农用组合物还包括RNA稳定剂。In another preferred embodiment, the agricultural composition further comprises an RNA stabilizer.
在另一优选例中,所述RNA稳定剂包括盐酸氰胍,RNA保护剂,去离子的甲酰胺等溶剂。In another preferred embodiment, the RNA stabilizer comprises a solvent such as cyanogenic hydrochloride, an RNA protectant, deionized formamide or the like.
本发明第四方面,提供了一种抗虫性双链RNA序列的用途,用于制备通过根部施用从而提高植物抗虫性的组合物。In a fourth aspect of the invention, there is provided the use of an insect-resistant double-stranded RNA sequence for the preparation of a composition for enhancing the insect resistance of a plant by root application.
本发明第五方面,提供了一种分离的多核苷酸,所述的多核苷酸选自下组:In a fifth aspect of the invention, an isolated polynucleotide is provided, the polynucleotide being selected from the group consisting of:
(a)SEQ ID NO.:1-6任一所示的序列;(a) the sequence shown in any one of SEQ ID NO.: 1-6;
(b)与(a)限定的序列互补的多核苷酸;或 (b) a polynucleotide complementary to the sequence defined by (a); or
(c)与(a)限定的序列具有至少70%((优选至少75%、80%、85%、90%,更优选至少95%、96%、97%、98%、99%)以上的序列一致性的任一多核苷酸或互补序列,其中,与所述任一多核苷酸序列互补的链的dsRNA经植食性害虫摄取后,具有抑制所述植食性害虫的生长的活性。(c) having at least 70% (preferably at least 75%, 80%, 85%, 90%, more preferably at least 95%, 96%, 97%, 98%, 99%) or more of the sequence defined by (a) Any polynucleotide or complementary sequence of sequence identity, wherein the dsRNA of the strand complementary to any of the polynucleotide sequences has an activity of inhibiting the growth of the herbivorous pest after ingestion by the herbivorous pest.
在另一优选例中,与所述任一多核苷酸序列互补的链的dsRNA能够通过灌溉、浸泡、浇灌或滴灌植物根部后由植物根部吸收,并经植食性害虫摄取后具有抑制所述植食性害虫的生长的活性。In another preferred embodiment, the dsRNA of the strand complementary to any of the polynucleotide sequences can be taken up by the roots of the plant after irrigation, soaking, watering or drip irrigation, and is inhibited by the herbivorous pests. The activity of the growth of herbivorous pests.
在另一优选例中,所述的抑制植食性害虫生长活性包括诱导或导致植食性害虫死亡。In another preferred embodiment, the inhibiting the growth activity of the herbivorous pest comprises inducing or causing the death of the herbivorous pest.
本发明第六方面,提供了一种dsRNA构建物,所述dsRNA的构建物为双链,并且其正链或负链含有式I所示的结构:In a sixth aspect of the invention, a dsRNA construct is provided, the construct of the dsRNA is double stranded, and the positive or negative strand thereof comprises the structure of formula I:
Seq正向-X-Seq反向 Seq forward- X-Seq reverse
式IFormula I
式中,In the formula,
Seq正向为植食性害虫生长相关基因或片段的核苷酸序列;A nucleotide sequence Seq forward growth-related genes or fragments of phytophagous insects;
Seq反向为与Seq正向基本上互补的核苷酸序列;Seq reverses to a nucleotide sequence that is substantially complementary to the Seq forward ;
X为位于Seq正向和Seq反向之间的间隔序列,并且所述间隔序列与Seq正向和Seq反向不互补,X is a spacer sequence located between the forward and Seq Seq the reverse, and the spacer sequence Seq Seq forward and reverse are not complementary,
其中,所述的植食性害虫生长相关基因选自:稻飞虱P450基因(Cyp18A1)、稻飞虱羧酸酯酶基因(carboxylesterase,Ces)、或亚洲玉米螟K型丝氨酸蛋白酶抑制剂基因(KPIs)。Wherein the plant-borne pest growth-related gene is selected from the group consisting of: a rice planthopper P450 gene (Cyp18A1), a rice locust carboxylasease (Ces), or an Asian corn borer K-serine protease inhibitor gene (KPIs). ).
在另一优选例中,所述的植食性害虫包括刺吸式口器害虫或钻蛀性害虫。In another preferred embodiment, the herbivorous pest comprises a sucking mouthparts pest or a drill collar pest.
在另一优选例中,所述dsRNA构建物可形成式I I所示的dsRNA,In another preferred embodiment, the dsRNA construct can form a dsRNA of Formula II,
Figure PCTCN2014090946-appb-000001
Figure PCTCN2014090946-appb-000001
式IIFormula II
式中,In the formula,
Seq'正向为Seq正向序列对应的RNA序列或序列片段;Seq 'Forward Forward sequence corresponds to Seq RNA sequences or fragments of sequences;
Seq'反向为与Seq'正向基本上互补的序列;Seq' reverse is a sequence that is substantially complementary to the Seq'forward;
X'为无;或为位于Seq'正向和Seq'反向之间的间隔序列,并且所述间隔序列与Seq'正向和Seq'反向不互补,X 'is absent; or located Seq' forward and Seq 'spacer sequence between the reverse, and the spacer sequence Seq' forward and Seq 'no reverse complementary,
||表示在Seq正向和Seq反向之间形成的氢键。|| represents a hydrogen bond formed between the Seq forward and the Seq reverse .
在另一优选例中,Seq正向、Seq反向的长度为至少50bp。In another preferred embodiment, the Seq forward and Seq inverse lengths are at least 50 bp.
在另一优选例中,所述的间隔序列X'的长度为0-300bp。In another preferred embodiment, the spacer sequence X' has a length of 0-300 bp.
本发明第七方面,提供了一种表达载体,所述表达载体含有本发明第六方面所述的dsRNA构建物。In a seventh aspect of the invention, an expression vector comprising the dsRNA construct of the sixth aspect of the invention is provided.
本发明第八方面,提供了一种遗传工程化的宿主细胞,所述宿主细胞中含有本发明第七方面所述的表达载体或者染色体中整合有对应于本发明第六方面所述的dsRNA构建物的DNA序列。According to an eighth aspect of the invention, a genetically engineered host cell comprising the expression vector of the seventh aspect of the invention or the integration of the dsRNA corresponding to the sixth aspect of the invention in the host cell is provided The DNA sequence of the object.
在另一优选例中,所述的宿主细胞为植物细胞,较佳地为玉米细胞或水稻细胞。In another preferred embodiment, the host cell is a plant cell, preferably a maize cell or a rice cell.
本发明第九方面,提供了一种dsRNA序列,所述dsRNA序列是抗虫性dsRNA,并且其长度为100-800bp,较佳地为150-600bp。 In a ninth aspect of the invention, there is provided a dsRNA sequence which is an insect resistant dsRNA and which is 100-800 bp in length, preferably 150-600 bp in length.
在另一优选例中,所述的dsRNA的序列源自选自下组的物种:农林害虫或蔬菜害虫。较佳地,所述物种包括鳞翅目螟蛾科的亚洲玉米螟及同翅目飞虱科的水稻褐飞虱。In another preferred embodiment, the sequence of the dsRNA is derived from a species selected from the group consisting of agricultural or forest pests or vegetable pests. Preferably, the species comprises the Asian corn borer of the Lepidoptera family and the rice brown planthopper of the Homoptera family.
在另一优选例中,所述的dsRNA序列是人工合成的或人工制备的。In another preferred embodiment, the dsRNA sequence is synthetic or artificially produced.
在另一优选例中,所述的“源自”指所述dsRNA与所述害虫中的靶基因的核苷酸序列的同源性(相同性)为95-100%,较佳地为99-100%。In another preferred embodiment, the "derived from" means that the dsRNA has a homology (identity) to the nucleotide sequence of the target gene in the pest of 95-100%, preferably 99. -100%.
在另一优选例中,所述的靶基因是所述害虫特有的。In another preferred embodiment, the target gene is specific to the pest.
在另一优选例中,所述的dsRNA的序列选自下组:SEQ ID NOs.:4-6;或其长度≥50bp的dsRNA。In another preferred embodiment, the sequence of the dsRNA is selected from the group consisting of SEQ ID NOs.: 4-6; or a dsRNA of ≥ 50 bp in length.
本发明第十方面,提供了一种防治害虫的方法,将本发明第三方面所述的农用组合物或本发明第九方面所述的dsRNA施用于需要防治害虫的植物。According to a tenth aspect of the present invention, a method for controlling pests, which comprises applying the agricultural composition of the third aspect of the invention or the dsRNA of the ninth aspect of the invention to a plant in need of pest control, is provided.
应理解,在本发明范围内中,本发明的上述各技术特征和在下文(如实施例)中具体描述的各技术特征之间都可以互相组合,从而构成新的或优选的技术方案。限于篇幅,在此不再一一赘述。It is to be understood that within the scope of the present invention, the various technical features of the present invention and the various technical features specifically described hereinafter (as in the embodiments) may be combined with each other to constitute a new or preferred technical solution. Due to space limitations, we will not repeat them here.
附图说明DRAWINGS
图1显示了水稻根系吸收dsRNA并下调相关基因的表达。Figure 1 shows that rice roots absorb dsRNA and down-regulate the expression of related genes.
图2显示了褐飞虱相关基因表达被抑制及对褐飞虱的致死率。Figure 2 shows inhibition of brown planthopper related gene expression and lethality to brown planthopper.
图3显示了亚洲玉米螟相关基因表达被抑制及对玉米螟的致死率。Figure 3 shows the inhibition of Asian corn borer-related gene expression and the lethality rate of corn borer.
图4显示了dsRNA的稳定性及降解率。Figure 4 shows the stability and degradation rate of dsRNA.
图5显示了将本发明dsRNA点滴于水稻叶表面的在24小时后,距离点滴处远端的叶面,同样能够观察到荧光现象,图中灰色部分即为所显示的荧光。Fig. 5 shows that the leaf surface at the distal end of the drip droplet after the dsRNA of the present invention was dripped on the surface of the rice leaf was observed 24 hours later, and the fluorescence phenomenon was also observed, and the gray portion in the figure was the displayed fluorescence.
图6显示了CK为清水处理对照提取的总RNA;DS-为不同双链RNA浸泡24小时后提取的总RNA,其下方的箭头表明其总RNA中有一条不同于CK的特异性条带,即为植物吸收的外源双链dsRNA,因为所有CK对照中没有这一特异条带。Figure 6 shows the total RNA extracted by CK for the clear water treatment control; DS- is the total RNA extracted after 24 hours of immersion in different double-stranded RNA, and the arrow below it indicates that there is a specific band different from CK in the total RNA. It is the exogenous double-stranded dsRNA that the plant absorbs because there is no such specific band in all CK controls.
图7显示了三种不同的dsRNA浸泡24h后用水稻茎部为材料提取总RNA,反转为cDNA后,扩增外源基因的dsRNA片段,结果获得与目标大小一致的片段,但在清水对照中则没有条带。Figure 7 shows the extraction of total RNA from rice stems after immersion for 24 h in three different dsRNAs. After inversion into cDNA, the dsRNA fragment of the foreign gene was amplified, and the fragment with the same size as the target was obtained, but in the water control There is no strip in the middle.
具体实施方式detailed description
本发明人经过广泛而深入的研究,对植食性害虫生长发育期间的重要基因进行筛选,意外地发现,如SEQ ID NO:4所示的针对稻飞虱P450(Cyp18A1)基因的dsRNA、如SEQ ID NO:5所示的针对稻飞虱羧酸酯酶(carboxylesterase,Ces)基因的dsRNA和如SEQ ID NO:6所示的针对亚洲玉米螟的K型丝氨酸蛋白酶抑制剂(KPIs)基因的dsRNA,所述dsRNA可制成灌溉液,经植物根系、叶片吸收后由植食性害虫摄入体内,行使对害虫靶基因的干扰,抑制靶基因的表达,最终导致钻蛀性及刺吸式害虫的死亡,达到防治虫害的目的。本发明的dsRNA可采用简单的配制及施用方法:灌溉即可达到防虫效果。本发明无需对植物进行转基因培育,就可以利用dsRNA进行害虫防治,尤其对喷洒农药无法防治的、隐藏于根叶及茎杆中的虫害进行有效防治。The present inventors conducted extensive and intensive research to screen important genes during the growth and development of herbivorous pests, and unexpectedly found that the dsRNA targeting the rice planthopper P450 (Cyp18A1) gene as shown in SEQ ID NO: 4, such as SEQ dsRNA targeting the carboxylesterase (Ces) gene represented by ID NO: 5 and dsRNA targeting the K-type serine protease inhibitor (KPIs) gene of Asian corn borer as shown in SEQ ID NO: 6. The dsRNA can be made into an irrigation liquid, which is absorbed by the plant roots and leaves, and then ingested by the herbivorous pests to interfere with the target genes of the pests, inhibit the expression of the target genes, and finally lead to the drilling and sucking pests. Death, to achieve the purpose of pest control. The dsRNA of the present invention can be simply formulated and applied: irrigation can achieve pest control effects. The invention can use the dsRNA to carry out pest control without the need of transgenic cultivation of the plant, especially for pests hidden in the root leaves and stems which cannot be controlled by spraying pesticides.
如本文所用,“基本上互补”是指核苷酸的序列是足够互补的,可以以一种可预见的方式发生相互作用,如形成二级结构(如茎环结构)。通常,两条“基本 上互补”的核苷酸序列互相之间至少有70%的核苷酸是互补的;优选的,至少有80%的核苷酸是互补的;更优选的,至少有90%的核苷酸是互补的;进一步优选的,至少有95%的核苷酸是互补的;如98%、99%或100%。一般地,两条足够互补的分子之间可以具有最多7个不匹配的核苷酸;优选的,具有最多6个不匹配的核苷酸;更优选的,具有最多5个不匹配的核苷酸;进一步优选的,具有最多4个不匹配的核苷酸,如具有0、1、2、3、4个不匹配的核苷酸。As used herein, "substantially complementary" means that the sequences of the nucleotides are sufficiently complementary to interact in a predictable manner, such as to form a secondary structure (eg, a stem-loop structure). Usually, two "basic At least 70% of the nucleotides of the complementary nucleotide sequences are complementary to each other; preferably, at least 80% of the nucleotides are complementary; more preferably, at least 90% of the nucleotides Compatible; further preferably, at least 95% of the nucleotides are complementary; such as 98%, 99% or 100%. In general, there may be up to 7 mismatched nuclei between two sufficiently complementary molecules. Glycosyl acid; preferably, having up to 6 unmatched nucleotides; more preferably, having up to 5 unmatched nucleotides; further preferably, having up to 4 unmatched nucleotides, such as having 0 1, 2, 3, 4 unmatched nucleotides.
如本文所用,“互补”的序列通常是指将5'-3'方向的序列转换为其3'-5'方向的序列(如5'ATCG 3'→GCTA),然后再取其互补序列(如GCTA→5'CGAT 3')。As used herein, a "complementary" sequence generally refers to a sequence that converts a sequence in the 5'-3' direction to its 3'-5' direction (eg, 5'ATCG 3'->GCTA), and then takes its complementary sequence ( Such as GCTA → 5 'CGAT 3').
如本文所用,“茎环”结构也被称作“发夹”结构,是指一种核酸分子,其可形成一种包括双链区域(茎部)的二级结构,所述的双链区域由该核酸分子的两个区域(位于同一分子上)形成,两个区域分列双链部分的两侧;其还包括至少一个“环”结构,包括非互补的核酸分子,即单链区域。即使该核酸分子的两个区域不是完全互补的,核酸的双链部分也可保持双链状态。例如,插入、缺失、取代等可导致一个小区域的不互补或该小区域自身形成茎环结构或其它形式的二级结构,然而,该两个区域仍可基本上互补,并在可预见的方式中发生相互作用,形成茎环结构的双链区域。茎环结构是本领域技术人员所熟知的,通常在获得了一条具有一级结构的核苷酸序列的核酸后,本领域技术人员能够确定该核酸是否能形成茎环结构。As used herein, a "stem loop" structure, also referred to as a "hairpin" structure, refers to a nucleic acid molecule that forms a secondary structure comprising a double-stranded region (stem), said double-stranded region Formed by two regions of the nucleic acid molecule (on the same molecule), the two regions are flanked by double-stranded portions; they also include at least one "loop" structure, including non-complementary nucleic acid molecules, ie, single-stranded regions. Even if the two regions of the nucleic acid molecule are not fully complementary, the double-stranded portion of the nucleic acid can remain in a double-stranded state. For example, insertions, deletions, substitutions, etc. may result in non-complementation of a small region or the formation of a stem-loop structure or other form of secondary structure by itself, however, the two regions may still be substantially complementary and are foreseeable Interaction occurs in the manner to form a double-stranded region of the stem-loop structure. Stem loop structures are well known to those skilled in the art, and typically after obtaining a nucleic acid having a nucleotide sequence of a primary structure, one skilled in the art will be able to determine whether the nucleic acid is capable of forming a stem-loop structure.
在本发明中,优选的茎环结构可如式II的dsRNA所示,X'为位于Seq'正向和Seq'反向之间的间隔序列,并且所述间隔序列与Seq'正向和Seq'反向不互补,当X’为无时,式II的dsRNA即为由Seq'正向和Seq'反向形成的、互补的双链RNA结构。In the present invention, a preferred stem-loop structure can be represented by a dsRNA of Formula II, X' is a spacer sequence located between the Seq' forward and Seq' inversions , and the spacer sequence is Seq' forward and Seq ' Reverse non-complementary, when X' is absent, the dsRNA of Formula II is a complementary double-stranded RNA structure formed by Seq' forward and Seq' reverse .
如本文所用,所述的“核酸抑制物”是指基于本发明的对于防治植食性害虫有用的靶标基因(片段)或其片段或截短形式制备获得的、具有防治植食性害虫活性的一类物质的总称。所述的“核酸抑制物”例如是一些干扰分子,包括dsRNA(又称为双链RNA、双链核糖核酸或双链核糖核苷酸序列)、反义核酸、小干扰RNA、微小RNA等,或是可以表达或形成所述dsRNA、反义核酸、小干扰RNA或微小RNA的构建物。As used herein, the term "nucleic acid inhibitor" refers to a class of target genes (fragments) useful in the control of herbivorous pests or fragments or truncated forms thereof, which are obtained by controlling the activity of herbivorous pests. The general name of the substance. The "nucleic acid inhibitor" is, for example, some interfering molecule, including dsRNA (also known as double-stranded RNA, double-stranded ribonucleic acid or double-stranded ribonucleotide sequence), antisense nucleic acid, small interfering RNA, microRNA, and the like. Or a construct that can express or form the dsRNA, antisense nucleic acid, small interfering RNA or microRNA.
在本发明中,核酸抑制物优选为dsRNA。In the present invention, the nucleic acid inhibitor is preferably a dsRNA.
如本文所用,所述的“可操作(性)地连接”或“操作性连接”是指两个或多个核酸区域或核酸序列的功能性的空间排列。例如:启动子区被置于相对于目的基因核酸序列的特定位置,使得核酸序列的转录受到该启动子区域的引导,从而,启动子区域被“可操作地连接”到该核酸序列上。As used herein, "operably linked" or "operably linked" refers to a spatial arrangement of the functionality of two or more nucleic acid regions or nucleic acid sequences. For example, the promoter region is placed at a specific position relative to the nucleic acid sequence of the gene of interest such that transcription of the nucleic acid sequence is directed by the promoter region such that the promoter region is "operably linked" to the nucleic acid sequence.
如本文所用,“与DNA序列对应的RNA序列”是指一种RNA序列,若DNA序列是“AT”则RNA序列是“AU”。As used herein, "an RNA sequence corresponding to a DNA sequence" refers to an RNA sequence which is "AU" if the DNA sequence is "AT".
“含有”,“具有”或“包括”包括了“包含”、“主要由……构成”、“基本上由……构成”、和“由……构成”;“主要由……构成”、“基本上由……构成”和“由……构成”属于“含有”、“具有”或“包括”的下位概念。"Include", "has" or "includes" includes "including", "consisting essentially of", "consisting essentially of", and "consisting of"; "consisting primarily of", "Substantially composed of" and "consisting of" are subordinate concepts of "contains," "has," or "includes."
RNA干扰(RNAi)RNA interference (RNAi)
如本文所用,术语“RNA干扰(RNA interference,RNAi)”是指:一些小的双链RNA可以高效、特异地阻断体内特定基因的表达,促使mRNA降解,诱使细胞表 现出特定基因缺失的表型,其也称为RNA干预或者RNA干涉。RNA干扰是高度特异的在mRNA水平上的基因沉默机制。As used herein, the term "RNA interference (RNAi)" means that some small double-stranded RNA can efficiently and specifically block the expression of specific genes in the body, promote mRNA degradation, and induce cell expression. A phenotype of a specific gene deletion is also known, which is also referred to as RNA intervention or RNA interference. RNA interference is a highly specific mechanism of gene silencing at the mRNA level.
如本文所用,术语“小干扰RNA(small interfering RNA,siRNA)”或“dsRNA”是指一种短片段双链RNA分子,能够以同源互补序列的mRNA为靶目标降解特定的mRNA,这个过程就是RNA干扰途径(RNA interference pathway)。As used herein, the term "small interfering RNA (siRNA)" or "dsRNA" refers to a short-segment double-stranded RNA molecule that is capable of degrading specific mRNAs with mRNAs of homologous complementary sequences. This process is RNA. RNA interference pathway.
在本发明中,所述RNA干扰的基本原理是:将干扰RNA制备为灌溉液,按常规灌溉方法浇灌植物后,使昆虫服食含有可干扰其基因表达的小干扰RNA(siRNA)或dsRNA的植物,从而诱导昆虫的死亡。In the present invention, the basic principle of the RNA interference is to prepare the interfering RNA as an irrigation liquid, and after the plants are watered according to the conventional irrigation method, the insects are subjected to small interfering RNA (siRNA) or dsRNA which may interfere with the expression of the gene. Plants, thereby inducing the death of insects.
作为一种优选的方式,利用一个内含子序列,两端连接上互补的基因序列,导入细胞后,能产生“茎-环”结构,并且“茎”状部分能够在昆虫体内被加工成约21-25nt左右的小RNA,这种小RNA能特别有效的抑制目的基因的表达。As a preferred manner, an intron sequence is ligated to the complementary gene sequence at both ends, and after introduction into the cell, a "stem-loop" structure can be produced, and the "stem"-like portion can be processed into an insect body. Small RNA of about 21-25 nt, this small RNA can effectively inhibit the expression of the target gene.
在本发明中,优选的干扰RNA是dsRNA。dsRNA是一种由正链和其互补链形成的双链RNA序列。其中,正链和负链可完全匹配或部分匹配。一种优选的dsRNA具有如式II结构式所示的dsDNA。In the present invention, a preferred interfering RNA is a dsRNA. A dsRNA is a double-stranded RNA sequence formed by a positive strand and its complementary strand. Among them, the positive and negative chains can be completely matched or partially matched. A preferred dsRNA has dsDNA as shown in the formula II.
在本发明中,dsRNA序列的长度没有特别限制,通常其长度为100-800bp,较佳地为150-600bp。In the present invention, the length of the dsRNA sequence is not particularly limited, and is usually 100-800 bp in length, preferably 150-600 bp.
在另一优选例中,所述的dsRNA的序列源自选自下组的物种:农林害虫或蔬菜害虫。较佳地,所述物种包括鳞翅目螟蛾科的亚洲玉米螟及同翅目飞虱科的水稻褐飞虱。In another preferred embodiment, the sequence of the dsRNA is derived from a species selected from the group consisting of agricultural or forest pests or vegetable pests. Preferably, the species comprises the Asian corn borer of the Lepidoptera family and the rice brown planthopper of the Homoptera family.
在另一优选例中,所述的dsRNA序列是人工合成的或人工制备的。In another preferred embodiment, the dsRNA sequence is synthetic or artificially produced.
在另一优选例中,所述的“源自”指所述dsRNA与所述植食性害虫中的靶基因的核苷酸序列的同源性(相同性)为95-100%,较佳地为99-100%。In another preferred embodiment, the "derived from" means that the dsRNA has a homology (identity) to the nucleotide sequence of the target gene in the herbivorous pest of 95-100%, preferably It is 99-100%.
在另一优选例中,所述的靶基因是所述植食性害虫特有的。In another preferred embodiment, the target gene is unique to the herbivorous pest.
在另一优选例中,所述的dsRNA的序列选自下组:SEQ ID NOs.:4-6;或其长度为≥50bp的dsRNA。In another preferred embodiment, the sequence of the dsRNA is selected from the group consisting of SEQ ID NOs.: 4-6; or a dsRNA of ≥ 50 bp in length.
昆虫生长相关基因Insect growth related genes
如本文所用,术语“昆虫生长相关基因”、“植食性害虫生长相关基因”一词可互换使用,均是指在主要以植物(尤其是农作物)为食物的昆虫生长相关的基因,所述的“生长相关”指的是所述基因的低表达或不表达将导致昆虫的生长、发育、代谢、繁殖等过程产生异常,甚至导致昆虫的死亡。在本发明的一个优选例中,所述的植食性害虫生长相关基因包括稻飞虱的P450基因(Cyp18A1)、羧酸酯酶基因(carboxylesterase,Ces)或亚洲玉米螟的K型丝氨酸蛋白酶抑制剂基因(KPIs)。As used herein, the terms "insect growth related gene", "phytophagous pest growth related gene" are used interchangeably and refer to a gene related to insect growth mainly in plants (especially crops). "Growth-related" means that low or no expression of the gene will cause abnormalities in the growth, development, metabolism, reproduction, etc. of the insect, and even lead to the death of the insect. In a preferred embodiment of the present invention, the herbivorous pest growth-related gene comprises a P450 gene (Cyp18A1), a carboxylesterase (Ces), or a K-serine protease inhibitor of Asian corn borer. Genes (KPIs).
“昆虫生长相关基因”是指那些与昆虫生长密切相关的基因,如P450基因中,有很多参与食物的解毒作用,这类基因的表达一旦被抑制,就会导致昆虫中毒。酯酶是昆虫体内一类重要的解毒酶系,它可以通过水解酯类毒性化合物的酯键,或与亲脂类有毒化合物结合,降低其有效浓度,来降低有毒化合物的毒性。许多杀虫剂是含有酯键的酯类化合物,如有机磷、氨基甲酸酯和拟除虫菊酯类农药,酯酶在昆虫的抗药性方面还有重要作用,如羧酸酯酶。因此,干扰昆虫体内酯酶的表达,不仅可以降低其解毒能力,还可以预防其抗药性的提高。而蛋白酶抑制剂是一类抑制蛋白酶活性的物质。丝氨酸蛋白酶抑制剂可以调控生物体内的多种生理反应,抑制酶的催化作用,阻止酶原转化为有活性的酶,因此,影响昆虫正常的 生长发育。"Insect growth related genes" are those genes closely related to insect growth. For example, in the P450 gene, many of them participate in the detoxification of foods. Once the expression of such genes is inhibited, insect poisoning is caused. Esterase is an important detoxifying enzyme system in insects. It can reduce the toxicity of toxic compounds by hydrolyzing ester bonds of ester toxic compounds or by combining with lipophilic toxic compounds to reduce their effective concentration. Many insecticides are ester compounds containing ester bonds, such as organophosphorus, carbamate and pyrethroid pesticides. Esterases also play important roles in insect resistance, such as carboxylesterases. Therefore, interfering with the expression of esterase in insects can not only reduce its detoxification ability, but also prevent its resistance. Protease inhibitors are a class of substances that inhibit protease activity. Serine protease inhibitors can regulate a variety of physiological reactions in the body, inhibit the catalytic action of the enzyme, prevent the conversion of the zymogen into an active enzyme, and therefore affect the normal insects. Growth and development.
优选地,在褐飞虱中,用针对P450基因(Cyp18A1)片段和羧酸酯酶基因(carboxylesterase,Ces)片段设计的dsRNA,浸泡水稻根后将除浸泡部位以外的植物器官饲喂褐飞虱,对应基因的表达被下调(图2a,2b);褐飞虱在相应dsRNA处理水稻上取食5天后的死亡率分别为26.67%和48.33%(图2c)。在亚洲玉米螟中,用针对K型丝氨酸蛋白酶抑制剂基因(KPIs)片段设计的dsRNA,浇灌玉米后饲喂亚洲玉米螟,该基因的表达被显著下调(图3a)。亚洲玉米螟在相应dsRNA处理玉米上取食5天后的死亡率为43.33%(图3b)。Preferably, in the brown planthopper, the dsRNA designed for the P450 gene (Cyp18A1) fragment and the carboxylesterase (Ces) fragment is used to soak the rice roots and then the plant organs other than the soaking part are fed to the brown planthopper, corresponding genes. Expression was down-regulated (Fig. 2a, 2b); the mortality of brown planthopper after 5 days of feeding on the corresponding dsRNA-treated rice was 26.67% and 48.33%, respectively (Fig. 2c). In Asian corn borer, the expression of this gene was significantly down-regulated by feeding dsRNAs designed for K-serine protease inhibitor gene (KPIs) fragments to Asian corn borer after watering the maize (Fig. 3a). The mortality rate of Asian corn borer after 5 days of feeding on the corresponding dsRNA-treated corn was 43.33% (Fig. 3b).
作为本发明的优选方式,本发明优选的植食性害虫生长相关基因的片段的长度至少为50bp,比如可以是60bp、80bp、100bp、200bp、500bp、1000bp。所述基因在用于本发明时,可以是全长基因或基因片段,优选地,针对稻飞虱的P450基因(Cyp18A1)的dsRNA如SEQ ID NO:4所示;针对稻飞虱的羧酸酯酶基因(carboxylesterase,Ces)的dsRNA如SEQ ID NO:5所示;针对亚洲玉米螟的K型丝氨酸蛋白酶抑制剂基因(KPIs)的dsRNA如SEQ ID NO:6所示。As a preferred aspect of the present invention, the preferred fragment of the herbivorous pest growth-related gene of the present invention has a length of at least 50 bp, and may be, for example, 60 bp, 80 bp, 100 bp, 200 bp, 500 bp, or 1000 bp. The gene may be a full-length gene or a gene fragment when used in the present invention, preferably, the dsRNA of the P450 gene (Cyp18A1) against rice planthopper is as shown in SEQ ID NO: 4; the carboxylic acid against rice planthopper The dsRNA of the esterase gene (Ces) is shown in SEQ ID NO: 5; the dsRNA of the K-type serine protease inhibitor gene (KPIs) against Asian corn borer is shown in SEQ ID NO: 6.
本发明还提供了针对非昆虫起源的EYFP基因的dsRNA,所述EYFP基因的序列如SEQ ID NO:7所示。与稻飞虱P450基因,羧酸酯酶基因和亚洲玉米螟K型丝氨酸蛋白酶抑制剂基因相比,EYFP基因的效果不佳。The present invention also provides a dsRNA directed against a non-insect-derived EYFP gene, the sequence of which is set forth in SEQ ID NO: 7. Compared with the rice planthopper P450 gene, the carboxylesterase gene and the Asian corn borer K-serine protease inhibitor gene, the EYFP gene is not effective.
本发明提供针对植食性害虫生长相关基因的dsRNA,可通过将dsRNA配制成灌溉液灌溉作物的根部并经植物根部吸收,昆虫在食用吸收了dsRNA的作物后,其生长受到抑制并出现大量死亡。The present invention provides a dsRNA for a herbivorous pest growth-related gene, which can be irrigated by the dsRNA to irrigate the root of the crop and absorbed through the root of the plant, and the insect is inhibited from growth and a large number of deaths are observed after the crop having absorbed the dsRNA.
本发明所示的dsRNA构建物如式I所示,dsRNA如式II所示,所采用的间隔序列X或X'的长度没有特别的限制,只要在其与正向序列和反向序列形成构建物且被导入到体内后,能够形成式II所示的dsRNA即可。作为本发明的优选方式,本发明所述的间隔序列的长度为80-300bp;更佳地为100-250bp。The dsRNA construct of the present invention is represented by Formula I, and the dsRNA is represented by Formula II, and the length of the spacer sequence X or X' employed is not particularly limited as long as it forms a construct with a forward sequence and a reverse sequence. After being introduced into the body, the dsRNA represented by Formula II can be formed. As a preferred mode of the present invention, the spacer sequence of the present invention has a length of 80 to 300 bp; more preferably 100 to 250 bp.
在本发明的一个优选例中,将所述的表达植食性害虫生长相关基因dsRNA的构建物导入到宿主中,所述宿主可以为植物细胞、组织或器官,所述构建物在植物体内可以表达昆虫基因dsRNA,dsRNA被加工成siRNA。一般地,siRNA的长度约在21-25nt左右。In a preferred embodiment of the present invention, the construct expressing the herbivorous pest growth-related gene dsRNA is introduced into a host, and the host may be a plant cell, a tissue or an organ, and the construct may be expressed in a plant. The insect gene dsRNA, dsRNA, is processed into siRNA. Generally, the length of the siRNA is about 21-25 nt.
通常,所述的构建物位于表达载体上。因此,本发明还包括一种载体,它含有所述的构建物。所述的表达载体通常还含有与所述的构建物操作性相连的启动子、复制起点和/或标记基因等。本领域的技术人员熟知的方法能用于构建本发明所需的表达载体。这些方法包括体外重组DNA技术、DNA合成技术、体内重组技术等。所述的表达载体优选地包含一个或多个选择性标记基因,以提供用于选择转化的宿主细胞的表型性状,如卡拉霉素、庆大霉素、潮霉素、氨苄青霉素抗性。Typically, the construct is located on an expression vector. Accordingly, the present invention also encompasses a vector comprising the construct. The expression vector typically also contains a promoter, an origin of replication, and/or a marker gene, etc., operably linked to the construct. Methods well known to those skilled in the art can be used to construct the expression vectors required for the present invention. These methods include in vitro recombinant DNA techniques, DNA synthesis techniques, in vivo recombinant techniques, and the like. The expression vector preferably comprises one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as kalatinmycin, gentamicin, hygromycin, ampicillin resistance.
包含上述的适当基因序列以及适当启动子或者控制序列的载体,可以用于转化适当的宿主。在本发明的方法中,所述的宿主可以是任何适合于携带所述表达载体并能够将所述表达载体传递给植物细胞的宿主。优选的,所述的宿主为农杆菌。Vectors comprising the appropriate gene sequences described above, as well as appropriate promoters or control sequences, can be used to transform a suitable host. In the methods of the invention, the host may be any host suitable for carrying the expression vector and capable of delivering the expression vector to a plant cell. Preferably, the host is Agrobacterium.
尽管在本发明的实例中所举例的植食性害虫为亚洲玉米螟和稻飞虱。然而应理解,本发明对于适用于本发明的昆虫没有特别的限制,所述昆虫可以是任何一种能以植物为食的植食性害虫,比如其可以是鳞翅目昆虫、半翅目昆虫、同翅目昆虫或双翅目昆虫。Although the herbivorous pests exemplified in the examples of the present invention are Asian corn borer and rice planthopper. However, it should be understood that the present invention is not particularly limited to insects suitable for use in the present invention, and the insect may be any herbivorous pest that can feed on plants, such as lepidopteran, hemipteran, Homoptera or Diptera insects.
本发明对于适用于本发明的植物没有特别的限制,可以为各种常见的经济作物 或观赏植物,如禾本科、十字花科、豆科等植物,较佳地为玉米或水稻。The present invention is not particularly limited to plants suitable for use in the present invention, and may be various common economic crops. Or ornamental plants, such as Gramineae, Cruciferae, Leguminosae, etc., preferably corn or rice.
靶标基因的核苷酸序列Nucleotide sequence of the target gene
稻飞虱的P450(Cyp18A1)基因片段如SEQ ID NO.1所示;稻飞虱的羧酸酯酶(carboxylesterase,Ces)基因片段如SEQ ID NO.2:所示;亚洲玉米螟的K型丝氨酸蛋白酶抑制剂(KPIs)基因的全长cDNA序列如SEQ ID NO.3所示。The P450 (Cyp18A1) gene fragment of rice planthopper is shown in SEQ ID NO. 1; the carboxylesterase (Ces) gene fragment of rice planthopper is shown in SEQ ID NO. 2: the type K of Asian corn borer The full-length cDNA sequence of the serine protease inhibitor (KPIs) gene is shown in SEQ ID NO.
dsRNA的靶序列Target sequence of dsRNA
在本发明的一个实施例中,基于RNAi技术,以稻飞虱的P450基因(Cyp18A1)作为靶标,筛选了针对P450基因的干扰RNA片段,优选地,所述P450基因片段的dsRNA序列如SEQ ID NO:4所示(dsRNA1:dsCyp18A1)。In one embodiment of the present invention, based on the RNAi technology, an interfering RNA fragment targeting the P450 gene is screened using the P450 gene of rice planthopper (Cyp18A1) as a target, and preferably, the dsRNA sequence of the P450 gene fragment is SEQ ID. NO: 4 (dsRNA1: dsCyp18A1).
在本发明的一个实施例中,基于RNAi技术,以稻飞虱羧酸酯酶基因(carboxylesterase,Ces)作为靶标,筛选了针对羧酸酯酶基因的干扰RNA片段,优选地,所述羧酸酯酶基因片段的dsRNA序列如SEQ ID NO:5所示(dsRNA2:dsCes)。In one embodiment of the present invention, an interfering RNA fragment directed against a carboxylesterase gene, preferably the carboxylic acid, is screened based on the RNAi technology using a carboxylesterase (Ces) gene as a target. The dsRNA sequence of the esterase gene fragment is set forth in SEQ ID NO: 5 (dsRNA2: dsCes).
在本发明的一个实施例中,基于RNAi技术,以亚洲玉米螟的K型丝氨酸蛋白酶抑制剂(KPIs)基因作为靶标,筛选了针对K型丝氨酸蛋白酶抑制剂(KPIs)基因的干扰RNA片段,优选地,所述K型丝氨酸蛋白酶抑制剂(KPIs)基因片段的dsRNA序列如SEQ ID NO:6所示。In one embodiment of the present invention, interfering RNA fragments targeting K-serine protease inhibitors (KPIs) are screened based on RNAi technology using K-type serine protease inhibitors (KPIs) genes of Asian corn borer as targets. The dsRNA sequence of the K-type serine protease inhibitor (KPIs) gene fragment is set forth in SEQ ID NO: 6.
在本发明的一个实施例中,基于RNAi技术,以水母的增强型黄色荧光蛋白基因EYFP,作为外源基因对照(SEQ ID NO.:7)。所述EYFP基因片段的dsRNA序列如SEQ ID NO:41所示(dsRNA:dsEYFP)。In one embodiment of the invention, the enhanced yellow fluorescent protein gene EYFP of jellyfish is used as a foreign gene control (SEQ ID NO.: 7) based on RNAi technology. The dsRNA sequence of the EYFP gene fragment is set forth in SEQ ID NO: 41 (dsRNA: dsEYFP).
dsRNA构建物及其应用dsRNA construct and its application
任何基于本发明提供的靶标基因(片段)或其片段或截短形式制备获得的、具有防治植食性害虫活性的物质都可作为核酸抑制物,用于防治植食性害虫。所述等核酸抑制物较佳的是一些干扰分子,例如,dsRNA、反义核酸、小干扰RNA或微小RNA的构建物,或可以表达或形成所述dsRNA、反义核酸、小干扰RNA或微小RNA的构建物。更佳地是dsRNA或可以表达所述dsRNA的构建物。Any substance obtained based on the target gene (fragment) provided by the present invention or a fragment thereof or a truncated form, which has activity for controlling herbivorous pests, can be used as a nucleic acid inhibitor for controlling herbivorous pests. Preferably, the nucleic acid inhibitor is a construct of a plurality of interfering molecules, eg, dsRNA, antisense nucleic acid, small interfering RNA or microRNA, or may express or form the dsRNA, antisense nucleic acid, small interfering RNA or micro RNA construct. More preferably, it is a dsRNA or a construct that can express the dsRNA.
根据本发明所提供的基因及其序列,可设计出用于表达dsRNA、反义核酸、小干扰RNA或微小RNA的构建物。因此,本发明提供了一种人工构建的构建物。根据本发明提供的基因及其序列来设计所述的构建物是本领域技术人员可了解的,通常可使该构建物包含一个内含子序列(与两侧序列不互补),两端连接上互补的基因序列,导入细胞后,能产生“茎环”结构,并且“茎”状部分能够形成dsRNA、反义核酸、小干扰RNA或微小RNA,这种dsRNA、反义核酸、小干扰RNA或微小RNA能特别有效的抑制目的基因的表达。According to the genes and sequences thereof provided by the present invention, constructs for expressing dsRNA, antisense nucleic acids, small interfering RNAs or microRNAs can be designed. Accordingly, the present invention provides an artificially constructed construct. Designing the constructs according to the genes provided by the present invention and their sequences is well known to those skilled in the art, and generally allows the construct to comprise an intron sequence (not complementary to the flanking sequences), ligated at both ends A complementary gene sequence that, when introduced into a cell, produces a "stem loop" structure, and the "stem" portion can form dsRNA, antisense nucleic acid, small interfering RNA or microRNA, such dsRNA, antisense nucleic acid, small interfering RNA or MicroRNAs are particularly effective in inhibiting the expression of genes of interest.
一种优选的实现本发明防治植食性害虫的方法包括将所述的核酸抑制物直接灌溉或浸泡用于需要防治的对象(如植物),以达到防治植食性害虫的目的。A preferred method for controlling the herbivorous pest of the present invention comprises directly irrigating or soaking the nucleic acid inhibitor for a subject (such as a plant) to be controlled to achieve the purpose of controlling a herbivorous pest.
本发明提供了一种dsRNA构建物,所述dsRNA的构建物为双链,并且其正链或负链含有式I所示的结构:The invention provides a dsRNA construct, the construct of the dsRNA is double stranded, and the positive or negative strand thereof comprises the structure of formula I:
Seq正向-X-Seq反向  式ISeq forward- X-Seq inverse I
式中, In the formula,
Seq正向为植食性害虫生长相关基因或片段的核苷酸序列;A nucleotide sequence Seq forward growth-related genes or fragments of phytophagous insects;
Seq反向为与Seq正向基本上互补的核苷酸序列;Seq reverses to a nucleotide sequence that is substantially complementary to the Seq forward ;
X为无,或为位于Seq正向和Seq反向之间的间隔序列,并且所述间隔序列与Seq正向和Seq反向不互补,X is none, or is a sequence of intervals between the Seq forward and Seq reverse , and the interval sequence is not complementary to the Seq forward and Seq reverse ,
其中,所述的植食性害虫生长相关基因为稻飞虱的P450基因(Cyp18A1)、羧酸酯酶基因(carboxylesterase,Ces)和亚洲玉米螟的K型丝氨酸蛋白酶抑制剂基因(KPIs)。The plant-related pest growth-related genes are the P450 gene (Cyp18A1), the carboxylesterase (Ces), and the K-serine protease inhibitor gene (KPIs) of the Asian corn borer.
在本发明的一个优选例中,Seq正向、Seq反向的长度为至少50bp。In a preferred embodiment of the invention, the Seq forward and Seq inverse lengths are at least 50 bp.
在本发明的一个优选例中,所述dsRNA构建物经作物根部吸收并被植食性害虫摄食后,形成式II所示的dsRNA,In a preferred embodiment of the present invention, the dsRNA construct is taken up by the root of the crop and ingested by the herbivorous pest to form a dsRNA of the formula II.
Figure PCTCN2014090946-appb-000002
  式II
Figure PCTCN2014090946-appb-000002
Formula II
式中,In the formula,
Seq'正向为Seq正向序列对应的RNA序列或序列片段;Seq 'Forward Forward sequence corresponds to Seq RNA sequences or fragments of sequences;
Seq'反向为与Seq'正向基本上互补的序列;Seq' reverse is a sequence that is substantially complementary to the Seq'forward;
X'为无;或为位于Seq'正向和Seq'反向之间的间隔序列,并且所述间隔序列与Seq'正向和Seq'反向不互补,X 'is absent; or located Seq' forward and Seq 'spacer sequence between the reverse, and the spacer sequence Seq' forward and Seq 'no reverse complementary,
||表示在Seq'正向和Seq'反向之间形成的氢键。|| represents a hydrogen bond formed between the Seq' forward and Seq' reverse .
当然,所述的构建物还可位于表达载体上。因此,本发明还包括一种载体,它含有所述的构建物。所述的表达载体通常还含有与所述的构建物操作性相连的启动子、复制起点和/或标记基因等。本领域的技术人员熟知的方法能用于构建本发明所需的表达载体。这些方法包括体外重组DNA技术、DNA合成技术、体内重组技术等。所述的表达载体优选地包含一个或多个选择性标记基因,以提供用于选择转化的宿主细胞的表型性状,如卡那霉素、庆大霉素、潮霉素、氨苄青霉素抗性。Of course, the construct can also be located on an expression vector. Accordingly, the present invention also encompasses a vector comprising the construct. The expression vector typically also contains a promoter, an origin of replication, and/or a marker gene, etc., operably linked to the construct. Methods well known to those skilled in the art can be used to construct the expression vectors required for the present invention. These methods include in vitro recombinant DNA techniques, DNA synthesis techniques, in vivo recombinant techniques, and the like. The expression vector preferably comprises one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as kanamycin, gentamicin, hygromycin, ampicillin resistance .
包含上述的适当基因序列以及适当启动子或者控制序列的载体,可以用于转化适当的宿主。在本发明的方法中,所述的宿主可以是任何适合于携带所述表达载体并能够表达出核酸抑制物的宿主。例如,所述的宿主为大肠杆菌,真菌,酵母,植物细胞,动物细胞等。Vectors comprising the appropriate gene sequences described above, as well as appropriate promoters or control sequences, can be used to transform a suitable host. In the methods of the invention, the host can be any host suitable for carrying the expression vector and capable of expressing a nucleic acid inhibitor. For example, the host is Escherichia coli, fungi, yeast, plant cells, animal cells, and the like.
用重组DNA转化宿主可用本领域技术人员熟知的常规技术进行,具体视植物种类的不同而定。当宿主为原核生物如大肠杆菌时,能吸收DNA的感受态细胞可在指数生长期后收获,用CaCl2法处理,所用的步骤在本领域众所周知。另一种方法是使用MgCl2。如果需要,转化也可用电穿孔的方法进行。真菌和酵母细胞、植物细胞、动物细胞的转化也是本领域技术人员熟知的。Transformation of the host with recombinant DNA can be carried out using conventional techniques well known to those skilled in the art, depending on the type of plant. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated by the CaCl 2 method, and the procedures used are well known in the art. Another method is to use MgCl 2. Conversion can also be carried out by electroporation if desired. Transformation of fungal and yeast cells, plant cells, animal cells is also well known to those skilled in the art.
携带所述构建物或表达载体并能够表达出核酸抑制物的宿主能够直接施用于需要防治的对象(如植物),以达到防治植食性害虫的目的。A host carrying the construct or expression vector and capable of expressing a nucleic acid inhibitor can be directly administered to a subject (such as a plant) in need of control for the purpose of controlling a herbivorous pest.
以上所述的茎环结构的“茎”状部分即由Seq正向和Seq反向相互作用形成,可被加工形成核酸抑制物。所形成的核酸抑制物具有如下结构:The "stem"-like portion of the stem-loop structure described above is formed by the reverse interaction of Seq forward and Seq and can be processed to form a nucleic acid inhibitor. The formed nucleic acid inhibitor has the following structure:
Figure PCTCN2014090946-appb-000003
Figure PCTCN2014090946-appb-000003
其中,Seq'正向选自SEQ ID NO:1-3任一所示序列对应的RNA序列或序列片段;Seq'反向为与Seq'正向基本上互补的序列。X'为位于Seq'正向和Seq'反向之间的间隔序列,所述间隔序列与Seq'正向和Seq'反向不互补。X'序列可在体外进行切除,也可不进行切除,待dsRNA进入昆虫体内后由昆虫体内的酶(如核酸酶Dicer)加工切除。Wherein, Seq' is positively selected from the RNA sequence or sequence fragment corresponding to the sequence shown in any one of SEQ ID NO: 1-3; and Seq' is reversed to a sequence substantially complementary to the Seq' forward . X 'is positioned Seq' forward and Seq 'spacer sequence between the reverse, and the spacer sequence Seq' forward and Seq 'is not complementary to the reverse. The X' sequence can be excised in vitro or not, and the dsRNA is processed and excised by an enzyme (such as nuclease Dicer) in the insect after it enters the insect body.
组合物及其应用Composition and its application
本发明还提供了一种组合物,所述组合物包含dsRNA构建物和/或dsRNA,以及药学或农药学上可接受的载体。在另一优选例中,所述的组合物是用于干扰植食性害虫生长、诱导或导致植食性害虫死亡的组合物。The invention also provides a composition comprising a dsRNA construct and/or dsRNA, and a pharmaceutically or agrochemically acceptable carrier. In another preferred embodiment, the composition is a composition for interfering with the growth of a herbivorous pest, inducing or causing death of a herbivorous pest.
在另一优选例中,所述的dsRNA具有以下序列:In another preferred embodiment, the dsRNA has the following sequence:
dsRNA1:如SEQ ID NO.:4所示;dsRNA1: as shown in SEQ ID NO.: 4;
dsRNA2:如SEQ ID NO.:5所示;dsRNA2: as shown in SEQ ID NO.: 5;
dsRNA3:如SEQ ID NO.:6所示;dsRNA3: as shown in SEQ ID NO.: 6;
在本发明的一个优选例中,组合物为水溶液,pH通常约为5-8,较佳地,pH约为6-8。In a preferred embodiment of the invention, the composition is an aqueous solution, typically having a pH of from about 5 to about 8, preferably a pH of from about 6 to about 8.
如本文所用,术语“载体”包括各种赋形剂和稀释剂。这类载体包括(但并不限于):水、盐水、缓冲液、葡萄糖、甘油、乙醇、及其组合。The term "carrier," as used herein, includes various excipients and diluents. Such carriers include, but are not limited to, water, saline, buffer, dextrose, glycerol, ethanol, and combinations thereof.
本发明的组合物可以直接灌溉或浇灌于作物器官,其中所述的器官包括植物的根、茎、叶、花、果;此外,还可将植物的器官浸泡于本发明组合物中,以达到本发明组合物经植物吸收的目的。当然,优选的方式为将本发明农用组合物配制或加入到灌溉液中,并灌溉于植物的根部,使本发明dsRNA通过根部吸收,带至非灌溉部分,从而使害虫在摄食植物非灌溉部分后,出现生长抑制或死亡,以达到植物的抗虫目的。The composition of the present invention can be directly irrigated or watered to a crop organ, wherein the organ includes roots, stems, leaves, flowers, and fruits of the plant; in addition, organs of the plant can be immersed in the composition of the present invention to achieve The composition of the invention is absorbed by plants. Of course, it is preferred that the agricultural composition of the present invention is formulated or added to an irrigation liquid and irrigated at the root of the plant, so that the dsRNA of the present invention is absorbed through the roots and brought to the non-irrigated portion, thereby allowing the pest to feed the non-irrigated portion of the plant. After that, growth inhibition or death occurs to achieve the insect resistance of the plant.
本发明的组合物中水和含有其他辅剂的水溶液通过常规方法进行制备。所述的组合物宜在无菌或无RNA酶的条件下制造。Water and an aqueous solution containing other adjuvants in the composition of the present invention are prepared by a conventional method. Preferably, the composition is made under sterile or RNase free conditions.
所述的植食性害虫生长相关基因来源于稻飞虱的P450基因(Cyp18A1)、羧酸酯酶基因(carboxylesterase,Ces)和亚洲玉米螟的K型丝氨酸蛋白酶抑制剂基因(KPIs);The plant-feeding pest growth-related gene is derived from the P450 gene (Cyp18A1), the carboxylesterase (Ces), and the K-serine protease inhibitor gene (KPIs) of Asian corn borer;
在另一优选例中,所述昆虫为刺吸式口器害虫或钻蛀性害虫,较佳地来自植食性害虫,最佳地来自水稻褐飞虱和亚洲玉米螟。In another preferred embodiment, the insect is a sucking mouthparts pest or a borer pest, preferably from a herbivorous pest, preferably from rice brown planthopper and Asian corn borer.
本发明的优点Advantages of the invention
(1)本发明将有效靶标基因的dsRNA制剂简便地以灌溉或浸泡的方式应用于田间害虫防治,可使植物有效地吸收本发明dsRNA及其组合物,从而避免将所有作物进行复杂的转基因操作;(1) The present invention applies a dsRNA preparation of an effective target gene to a field pest control simply by irrigation or soaking, so that the plant can effectively absorb the dsRNA of the present invention and a composition thereof, thereby avoiding complicated transgenic operation of all crops. ;
(2)本发明针对刺吸式、钻蛀性以及地下害虫,进行植食性害虫靶标基因的高通量筛选;(2) The present invention performs high-throughput screening of herbivorous pest target genes for sucking, drilling, and underground pests;
(3)本发明通过靶标的轮流及混合应用解决害虫防治过程中可能产生的抗性问题;(3) The present invention solves the problem of resistance that may occur during pest control through the rotation and mixing application of the target;
(4)本发明dsRNA制剂是具有相对稳定性,保障在作物生长期内发挥杀虫剂的功能;(4) The dsRNA preparation of the present invention has relative stability and ensures the function of playing an insecticide during the growth period of the crop;
(5)在田间光照条件下,本发明dsRNA制剂可以在作物生长期过后被快速降 解,具有很好的生物安全性和生态安全性。(5) Under field light conditions, the dsRNA preparation of the present invention can be rapidly reduced after the crop growth period Solution, with good bio-safety and ecological safety.
下面结合具体实施例,进一步阐述本发明。应理解,这些实施例仅用于说明本发明而不用于限制本发明的范围。下列实施例中未注明具体条件的实验方法,通常按照常规条件如Sambrook等人,分子克隆:实验室手册(New York:Cold Spring Harbor Laboratory Press,1989)中所述的条件,或按照制造厂商所建议的条件。The invention is further illustrated below in conjunction with specific embodiments. It is to be understood that the examples are not intended to limit the scope of the invention. The experimental methods in the following examples which do not specify the specific conditions are usually carried out according to the conditions described in conventional conditions such as Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Cold Spring Harbor Laboratory Press, 1989), or according to the manufacturer. The suggested conditions.
通用方法General method
植物材料的种植培养Planting and cultivation of plant materials
本研究中所用到植物材料有水稻品种中花11(ZH11,购自中国水稻研究所)和玉米品种郑单958(ZD958,购自河南农业科学研究院)。水稻种子播种在高10cm,直径为5cm的圆柱型塑料杯中;玉米种子播种在15cm,直径为10cm的圆柱型塑料杯中。所有的植物种植后置于温室中培养。温室中的昼/夜温度为28/22℃,昼/夜光周期为14/10小时,相对湿度50-60%。The plant materials used in this study were rice variety Zhonghua 11 (ZH11, purchased from China Rice Research Institute) and corn variety Zhengdan 958 (ZD958, purchased from Henan Agricultural Science Research Institute). Rice seeds were sown in a cylindrical plastic cup 10 cm high and 5 cm in diameter; corn seeds were sown in a 15 cm cylindrical plastic cup with a diameter of 10 cm. All plants are grown in a greenhouse after planting. The day/night temperature in the greenhouse is 28/22 ° C, the day/night cycle is 14/10 hours, and the relative humidity is 50-60%.
昆虫的饲养Insect breeding
水稻褐飞虱和亚洲玉米螟采自上海松江五厍农场。褐飞虱种群饲养在上述种植的ZH11水稻品种上,取2-3龄若虫用于本实验。Rice brown planthopper and Asian corn borer were collected from Shanghai Songjiang Wuyi Farm. The brown planthopper population was raised on the ZH11 rice variety planted above, and 2-3 instar nymphs were used for this experiment.
亚洲玉米螟用人工饲料,在光照培养箱中饲养。培养箱温度为25℃,昼/夜光周期为14/10小时,相对湿度75%。Asian corn borer is bred in a light incubator with artificial feed. The incubator temperature was 25 ° C, the day/night cycle was 14/10 hours, and the relative humidity was 75%.
玉米螟饲养配方为:玉米粉120.0克,玉米面32.0克,大豆粉120.0克,维生素C 4.0克,琼脂12.0克,酵母粉72克,山梨酸4.0克,葡萄糖60.0克,甲醛1.6ml,水1升。The corn carp feeding formula is: corn poulte 120.0 g, corn flour 32.0 g, soybean powder 120.0 g, vitamin C 4.0 g, agar 12.0 g, yeast powder 72 g, sorbic acid 4.0 g, glucose 60.0 g, formaldehyde 1.6 ml, water 1 liter .
实施例1Example 1
筛选靶标基因Screening target gene
1.水稻,玉米,褐飞虱及亚洲玉米螟总RNA的提取1. Extraction of total RNA from rice, corn, brown planthopper and Asian corn borer
水稻及玉米取叶片,褐飞虱取2-3龄的若虫,亚洲玉米螟用3龄幼虫分别进行总RNA的提取,采用常规Trizol法提取RNA,常规方法纯化,DNA酶处理,获得浓度≥300ng/ul、总量≥6ug、OD260/280为1.8~2.2的总RNA样品。The leaves of rice and maize were taken, the nymphs of 2-3 years old were taken from brown planthopper, and the total RNA was extracted from 3rd instar larvae of Asian corn borer. RNA was extracted by conventional Trizol method, purified by conventional methods and treated with DNase to obtain concentration ≥300ng/ul. Total RNA samples with a total of ≥6ug and OD260/280 of 1.8-2.2.
2.mRNA的分离及cDNA的合成2.Isolation of mRNA and synthesis of cDNA
用带有oligo-dT的磁珠分离出带有polyA的mRNA,然后用随机六聚物和Invitrogen的Superscript II reverse transcriptase试剂盒合成cDNA第一链。The mRNA with polyA was isolated using magnetic beads with oligo-dT, and then the first strand of cDNA was synthesized using a random hexamer and Invitrogen's Superscript II reverse transcriptase kit.
3.基因的扩增及测序3. Gene amplification and sequencing
利用表1所示的靶标基因特异的引物,以上述合成的cDNA为模板进行表中所列基因的扩增,将获得的基因片段纯化,连接到pMD18-T载体(Takara公司)中,转化入大肠杆菌Top10菌株,蓝白斑筛选,阳性菌株测序,测试正确后用作dsRNA合成的模板。Using the target gene-specific primers shown in Table 1, the above-prepared cDNA was used as a template to amplify the genes listed in the table, and the obtained gene fragment was purified, ligated into pMD18-T vector (Takara), and transformed into E. coli Top10 strain, blue-white spot screening, positive strain sequencing, used as a template for dsRNA synthesis after correct testing.
表1、基因合成所用引物Table 1. Primers used for gene synthesis
Figure PCTCN2014090946-appb-000004
Figure PCTCN2014090946-appb-000004
Figure PCTCN2014090946-appb-000005
Figure PCTCN2014090946-appb-000005
实施例2Example 2
dsRNA的合成Synthesis of dsRNA
用带有T7接头的引物(表2)扩增获得合成dsRNA的靶标基因序列并测序,利用MEGAscript RNAi kit(Ambion,Huntingdon,UK)合成并纯化dsRNA。The target gene sequence of the synthetic dsRNA was amplified and sequenced using a primer with a T7 adaptor (Table 2), and the dsRNA was synthesized and purified using a MEGAscript RNAi kit (Ambion, Huntingdon, UK).
具体步骤和方法Specific steps and methods
1、Trizol法抽提靶标物种总RNA并纯化。1. Extract the total RNA of the target species by Trizol method and purify it.
(1)将100mg组织用液氮研磨成粉末状(使用DEPC处理过的研钵);(1) 100 mg of tissue was ground to a powder with liquid nitrogen (using a DEPC-treated mortar);
(2)将干粉倒入装有
Figure PCTCN2014090946-appb-000006
的离心管中;
(2) Pour the dry powder into the loading
Figure PCTCN2014090946-appb-000006
In a centrifuge tube;
(3)室温放置5min后,加入200μl氯仿,倒置混匀15s;(3) After standing at room temperature for 5 min, add 200 μl of chloroform, and mix by inversion for 15 s;
(4)室温静置5min后,4℃12000rpm离心15min;(4) After standing at room temperature for 5 min, centrifuge at 12000 rpm for 15 min at 4 °C;
(5)取上层清液至新的离心管中,加入等体积的异丙醇(~500μl),倒置混匀数次;(5) Take the supernatant liquid into a new centrifuge tube, add an equal volume of isopropyl alcohol (~500μl), and mix and invert several times;
(6)室温静置10min后,4℃12000rpm离心10min;(6) After standing at room temperature for 10 min, centrifuge at 10 ° C for 10 min at 4 ° C;
(7)轻轻倒掉上清,保留沉淀,加入500~1000μl 75%乙醇稍加润洗;(7) gently pour off the supernatant, retain the precipitate, add 500 ~ 1000μl 75% ethanol and slightly rinse;
(8)4℃7600rpm离心5min后,轻轻倒掉乙醇,倒扣在吸水纸上控干乙醇,保持10min;(8) After centrifugation at 7600 rpm for 5 min at 4 ° C, the ethanol was decanted, and the ethanol was inverted on the absorbent paper to maintain the ethanol for 10 min;
(9)加入适量DEPC水,溶解10min。(9) Add appropriate amount of DEPC water and dissolve for 10 minutes.
(10)将RNA样品加DEPC水扩大到100μl,加100μl(等量)苯酚/氯仿/异戊醇(25:24:1),充分混匀;(10) Expand the RNA sample plus DEPC water to 100 μl, add 100 μl (equal amount) of phenol/chloroform/isoamyl alcohol (25:24:1), and mix well;
(11)13000rpm室温离心5min,上层液体移至另一离心管;(11) centrifugation at 13,000 rpm for 5 min at room temperature, the upper layer of liquid was transferred to another centrifuge tube;
(12)加100μl(等量)氯仿/异戊醇(24:1),充分混匀;(12) Add 100 μl (equal amount) of chloroform/isoamyl alcohol (24:1) and mix well;
(13)13000rpm室温离心5min,上层液体转移至另一离心管;(13) centrifugation at 13,000 rpm for 5 min at room temperature, the upper layer liquid is transferred to another centrifuge tube;
(14)加10μl(1/10量)的3M NaOAc(pH5.2);(14) Add 10 μl (1/10 amount) of 3M NaOAc (pH 5.2);
(15)加250μl(2.5倍)冷无水乙醇,-70℃过夜沉淀(或-20℃沉淀2h);(15) Add 250 μl (2.5 times) cold absolute ethanol, precipitate at -70 ° C overnight (or precipitate at -20 ° C for 2 h);
(16)4℃13000rpm离心5min,去上清留沉淀,用1ml 75%冷乙醇润洗,干燥5min;(16) Centrifuge at 13000 rpm for 5 min at 4 ° C, remove the supernatant to leave a precipitate, rinse with 1 ml of 75% cold ethanol, and dry for 5 min;
(17)加适量DEPC水,溶解10min;(17) Add appropriate amount of DEPC water and dissolve for 10 minutes;
(18)稀释100倍测定浓度,并电泳检测质量。(18) Dilute 100 times the measured concentration and measure the quality by electrophoresis.
2、反转cDNA。2. Reverse the cDNA.
(1)混合以下试剂:(1) Mix the following reagents:
Figure PCTCN2014090946-appb-000007
Figure PCTCN2014090946-appb-000007
Figure PCTCN2014090946-appb-000008
Figure PCTCN2014090946-appb-000008
(2)加Oligo dT Primer(25pmol/μl)1μl;(2) plus Oligo dT Primer (25pmol / μl) 1μl;
(3)加模板RNA(1μg以下)xμl;(3) plus template RNA (1 μg or less) x μl;
(4)加反转录酶1μl;(4) plus reverse transcriptase 1 μl;
(5)30℃10min,42℃20min,99℃5min;(5) 30 ° C 10 min, 42 ° C 20 min, 99 ° C 5 min;
(6)立即置于冰上5min;(6) Immediately placed on ice for 5 min;
(7)瞬间离心后,cDNA于-20℃保存。(7) After transient centrifugation, the cDNA was stored at -20 °C.
3、利用表2中的dsRNA引物扩增dsRNA模板,并将产物切胶回收。3. The dsRNA template was amplified using the dsRNA primers in Table 2, and the product was cut into gels.
(1)电泳、割胶;(1) Electrophoresis and tapping;
(2)加入等体积的Binding Buffer(XP2),55~60℃温育7min或至胶完全溶解,其间每2~3min振荡一次;(2) Add an equal volume of Binding Buffer (XP2), incubate at 55-60 ° C for 7 min or until the gel is completely dissolved, shaking once every 2 to 3 min;
(3)将
Figure PCTCN2014090946-appb-000009
DNA column放入2ml收集管;
(3) will
Figure PCTCN2014090946-appb-000009
Put the DNA column into a 2ml collection tube;
(4)在column上加700μl胶融液,10,000×g室温离心1min;(4) Add 700 μl of gelatin to the column and centrifuge at 10,000 × g for 1 min at room temperature;
(5)弃滤过液,column放入原收集管;(5) Dispose of the filtered liquid, and the column is placed in the original collection tube;
(6)在column上加300μl Binding Buffer(XP2),10,000×g室温离心1min,弃滤过液,column放入原管;(6) Add 300 μl Binding Buffer (XP2) to the column, centrifuge at 10,000 × g for 1 min at room temperature, discard the filtered solution, and place the column into the original tube;
(7)在column上加700μl SPW Wash Buffer(无水乙醇稀释),10,000×g室温离心1min,弃滤过液,column放入原管;(7) Add 700 μl SPW Wash Buffer (diluted with absolute ethanol) to the column, centrifuge at 10,000 × g for 1 min at room temperature, discard the filtered solution, and place the column into the original tube;
(8)OPTIONAL:重复步骤(7);(8) OPTIONAL: repeat step (7);
(9)弃滤过液,空的column以最高速(≥13,000×g)离心2min;(9) discard the filtered liquid, and the empty column is centrifuged at the highest speed (≥13,000×g) for 2 min;
(10)将column放入干净的1.5ml离心管,想柱中心加30~50μl Elution Buffer,室温放置1min,最高速(≥13,000×g)离心1min以洗脱DNA。(10) Put the column into a clean 1.5ml centrifuge tube, add 30-50μl Elution Buffer to the center of the column, leave it at room temperature for 1min, and centrifuge at the highest speed (≥13,000×g) for 1min to elute the DNA.
4、dsRNA合成4, dsRNA synthesis
(1)8μL ATP/CTP/UTP/GTP solution(1) 8 μL ATP/CTP/UTP/GTP solution
(2)1μg纯化后的DNA(2) 1 μg of purified DNA
(3)2μL Enzyme Mix(3) 2μL Enzyme Mix
(4)混合液置于37℃培养箱中孵育4h,产物即为dsRNA。(4) The mixture was incubated in a 37 ° C incubator for 4 h, and the product was dsRNA.
(5)加入1μL TURBO DNase,混匀后37℃孵育15min,产物即为dsRNA(5) Add 1 μL of TURBO DNase, mix and incubate at 37 ° C for 15 min, the product is dsRNA
表2合成dsRNA所用到的引物Table 2 Primers used to synthesize dsRNA
Figure PCTCN2014090946-appb-000010
Figure PCTCN2014090946-appb-000010
Figure PCTCN2014090946-appb-000011
Figure PCTCN2014090946-appb-000011
其中,EYFP为增强型黄色荧光蛋白基因,作为外源基因对照。Among them, EYFP is an enhanced yellow fluorescent protein gene as a foreign gene control.
实施例3植物器官对外源性dsRNA的吸收Example 3 Absorption of exogenous dsRNA by plant organs
本实验分别采用空白(CK)、本发明dsRNA(SEQ ID NOs.:4-6)、水稻内源性基因Actin的dsRNA(SEQ ID NO.:40)以及对照外源性dsRNA即dsEYFP(SEQ ID NO.:41)通过根系吸收dsRNA后,对茎部(不与dsRNA浸泡液接触的茎部)的dsRNA表达情况进行观察和测定,所有dsRNA的终浓度均为0.5mg/ml,其分组如下:This experiment uses blank (CK), dsRNA of the present invention (SEQ ID NOs.: 4-6), dsRNA of rice endogenous gene Actin (SEQ ID NO.: 40), and control exogenous dsRNA, dsEYFP (SEQ ID). NO.: 41) After the dsRNA was absorbed by the root system, the expression of dsRNA in the stem (the stem not in contact with the dsRNA soaking solution) was observed and measured, and the final concentration of all dsRNAs was 0.5 mg/ml, which were grouped as follows:
a.空白对照组:记为CK,这种对照是将测试的植物(水稻或玉米),同样的方法种植,生长条件一致,但不用dsRNA溶液处理,如本发明中,水稻是用清水浸泡,而玉米则是用清水灌溉;a. blank control group: recorded as CK, this control is planted (rice or corn), the same method of planting, the growth conditions are the same, but not treated with dsRNA solution, as in the present invention, the rice is soaked with water, Corn is irrigated with clear water;
b.本发明dsRNA:采用褐飞虱内源表达的P450基因(Cyp18A1)的dsRNA(dsCyp18A1)、羧酸酯酶基因(carboxylesterase,Ces)的dsRNA(dsCES)、或亚洲玉米螟内源表达的K型丝氨酸蛋白酶抑制剂基因(KPIs)的dsRNA(dsKPI)对植物根部进行灌溉或浸泡后,对本发明dsCES、dsCyp18A1、dsKPI的通过根部吸收后茎部的dsRNA表达情况进行测定;b. The dsRNA of the present invention: a dsRNA (dsCyp18A1), a carboxylesterase (Ces) dsRNA (dsCES), or a K-serine endogenously expressed in Asian corn borer, which is endogenously expressed by the brown planthopper, P450 gene (Cyp18A1) The dsRNA (dsKPI) of the protease inhibitor gene (KPIs) is used to irrigate or soak the roots of the plants, and the dsRNA expression of the stems of the dsCES, dsCyp18A1, and dsKPI of the present invention after root absorption is measured;
c.采用水稻内源基因Actin的dsRNA浸泡水稻根部,并测定dsRNA通过根部吸收后茎部Actin的表达情况;c. Soaking rice roots with dsRNA of rice endogenous gene Actin, and measuring the expression of Actin in the stem after dsRNA absorption through the root;
d.采用昆虫和植物体内均不存在的外源基因:维多利亚多管水母的增强型黄色荧光蛋白(EYFP)的dsRNA(dsEYFP)对植物根部进行灌溉或浸泡后,测定茎部dsRNA的表达情况。d. Exogenous genes not found in insects and plants: The enhanced yellow fluorescent protein (EYFP) dsRNA (dsEYFP) of Victoria multi-tube jellyfish is used to irrigate or soak the roots of plants to determine the expression of dsRNA in stems.
结果:result:
用终浓度为0.5mg/ml的带FAM荧光标记的dsEYFP浸泡水稻根24h后,荧光显微镜下在水稻的叶鞘处可以观察到明显的绿色荧光(图1a),将水稻茎横切后也可以看到水稻茎内呈现明显的绿色荧光(图1b),提取吸收dsRNA后的水稻茎秆RNA,以此为模板扩增dsRNA,可以得到与外源基因dsEYFP相同大小的条带(图1c)。而且,用水稻内源基因Actin的dsRNA浸泡水稻根24h后,水稻根的生长被显著抑制(图1d,e),该基因的表达也被显著的抑制(图1f)。这些结果说明外源性dsRNA可以通过根系进入植物的体内,并抑制相关基因的表达。After soaking the rice roots with FAM fluorescently labeled dsEYFP at a final concentration of 0.5 mg/ml for 24 h, obvious green fluorescence was observed in the leaf sheath of rice under the fluorescence microscope (Fig. 1a). Apparent green fluorescence was observed in the stem of rice (Fig. 1b), and the rice stem RNA after dsRNA was extracted to amplify the dsRNA as a template, and a band of the same size as the exogenous gene dsEYFP was obtained (Fig. 1c). Moreover, after soaking rice roots with the dsRNA of the rice endogenous gene Actin for 24 h, the growth of rice roots was significantly inhibited (Fig. 1d, e), and the expression of this gene was also significantly inhibited (Fig. 1f). These results indicate that exogenous dsRNA can enter the plant through the root system and inhibit the expression of related genes.
如图6所示,CK为清水处理对照提取的总RNA;DS-为不同双链RNA对植物根部进行灌溉或浸泡24小时后茎部提取的总RNA,其下方的箭头表明其总RNA中有一条不同于CK的特异性条带,即为植物吸收的外源双链dsRNA,因为所有CK对照中没有这一特异条带。图7显示了用dsCYP18A1;dsCes;dsEYFP等三种不同的dsRNA浸泡水稻24h后,用水稻茎部为材料提取总RNA,反转为cDNA后,扩增外源基因的dsRNA片段,结果获得与目标大小一致的片段,但在清水对照中则没有条带。As shown in Figure 6, CK is the total RNA extracted from the water treatment control; DS- is the total RNA extracted from the stem after irrigation or soaking the roots of the plants for 24 hours with different double-stranded RNA, and the arrow below it indicates that there is A specific band different from CK is the exogenous double-stranded dsRNA that the plant absorbs because there is no such specific band in all CK controls. Figure 7 shows that after soaking rice with three different dsRNAs such as dsCYP18A1; dsCes; dsEYFP for 24h, the total RNA was extracted from the stem of rice, and then inverted into cDNA, the dsRNA fragment of the foreign gene was amplified, and the result was obtained. Fragments of consistent size, but no bands in the clear water control.
此外,将本发明dsRNA点滴于水稻叶表面,发现在24小时后,距离点滴处远端的叶面,同样能够观察到荧光现象,说明本发明dsRNA可经过植物的叶面吸收。(图5)In addition, the dsRNA of the present invention was spotted on the surface of rice leaves, and it was found that after 24 hours, the leaf surface at the distal end of the drip was observed, and fluorescence phenomenon was also observed, indicating that the dsRNA of the present invention can be absorbed by the foliage of the plant. (Figure 5)
结论:带有荧光标记的外源性dsRNA可以被植物器官尤其是根部吸收至植株的茎部,植物基因本身的dsRNA能够通过根系吸收并影响植物的生长,而本发明中针对昆虫生长的dsRNA也均能通过植物器官尤其是根部吸收并输送到植物茎部, 并且叶也能实现对dsRNA的运输。由此可见,外源性dsRNA可通过植物的器官,如根、叶等吸收入植物内部。Conclusion: Fluorescently labeled exogenous dsRNA can be absorbed into the stem of plants by plant organs, especially roots. The dsRNA of the plant gene itself can be absorbed by roots and affect the growth of plants, while the dsRNAs for insect growth in the present invention are also Both can be absorbed by plant organs, especially the roots, and transported to the stems of plants. And leaves can also transport dsRNA. Thus, exogenous dsRNA can be absorbed into the interior of the plant through organs of the plant, such as roots, leaves, and the like.
实施例4通过根部吸收的外源性dsRNA对昆虫的致死作用测试。Example 4 Test for lethal effects of insects by exogenous dsRNA absorbed by the roots.
本实验采用合成的dsRNA对水稻和玉米进行模拟灌溉实验,并观察其对昆虫的影响,并利用qPCR对样品进行基因表达情况的检测,引物见表3,dsRNA的序列及基因来源信息如表4所示。In this experiment, synthetic dsRNA was used to simulate rice and maize, and its effects on insects were observed. The gene expression of the samples was detected by qPCR. The primers are shown in Table 3. The sequence and gene source information of dsRNA are shown in Table 4. Shown.
表3.用于定量PCR检测的引物Table 3. Primers for quantitative PCR detection
Figure PCTCN2014090946-appb-000012
Figure PCTCN2014090946-appb-000012
表4dsRNA的名称及来源信息Table 4 dsRNA name and source information
Figure PCTCN2014090946-appb-000013
Figure PCTCN2014090946-appb-000013
4.1水稻根系吸收dsRNA后对褐飞虱的致死作用4.1 Lethal effect of rice roots on the absorption of dsRNA against brown planthopper
水稻ZH11种子经过催芽后在营养液中生长至两叶期,将水稻移植至0.5mg/ml的dsRNA溶液中,将水稻根全部浸在溶液中,浸泡24h后,获得经浸泡处理的水稻。After germination, the seeds of rice ZH11 were grown in the nutrient solution to the two-leaf stage. The rice was transplanted into a 0.5 mg/ml dsRNA solution, and the rice roots were all immersed in the solution. After soaking for 24 hours, the soaked rice was obtained.
再将1-2龄褐飞虱接到上述经浸泡处理的水稻上,每株10头,飞虱主要集中在水稻茎部,距离根1-4cm位置(非浸泡部位)取食。接虫24h后取飞虱,检测基因表达情况。在整个试验过程中,采取防护措施,使得飞虱不直接接触dsRNA溶液。Then, 1-2 instar brown planthoppers were connected to the above-mentioned soaked rice, and each plant had 10 heads. The planthoppers were mainly concentrated in the stems of rice, and were fed from the roots of 1-4 cm (non-soaked parts). After 24 hours of inoculation, the planthoppers were taken to detect gene expression. During the entire test, protective measures were taken to prevent the planthopper from directly contacting the dsRNA solution.
其中,dsRNA溶液为合成褐飞虱内源表达的P450基因(Cyp18A1)和或羧酸酯酶基因(carboxylesterase,Ces)的dsRNA、或dsEYFP(浓度分别为0.5mg/mL)。 Among them, the dsRNA solution is a synthetic P450 gene (Cyp18A1) and or a carboxylesterase (Ces) dsRNA or dsEYFP (concentration of 0.5 mg/mL, respectively) expressed by the brown planthopper.
结果表明,褐飞虱这两个基因的表达被显著下调(图2a,b)。用双链RNA处理24小时后,将褐飞虱放在相应dsRNA处理的水稻上连续取食5天后的死亡率分别为26.67%和48.33%(图2c及表5)。The results showed that the expression of the two genes of brown planthopper was significantly down-regulated (Fig. 2a, b). After 24 hours of treatment with double-stranded RNA, the mortality rates of brown planthoppers on the corresponding dsRNA-treated rice for 5 days after continuous feeding were 26.67% and 48.33%, respectively (Fig. 2c and Table 5).
表5.褐飞虱基因dsRNA浇灌水稻后对稻飞虱的致死率Table 5. Lethality rate of rice planthopper after watering rice with brown planthopper gene dsRNA
Figure PCTCN2014090946-appb-000014
Figure PCTCN2014090946-appb-000014
4.2玉米根系吸收dsRNA后对亚洲玉米螟的致死作用4.2 Lethality of Asian corn borer after absorption of dsRNA by maize roots
将郑单985玉米种子种植在营养钵中,待玉米长到3叶期时开始用0.5mg/ml的dsRNA溶液灌溉根部,24h后接入玉米螟,每株玉米苗上接入2龄玉米螟幼虫10头,玉米螟主要取食玉米叶部位和茎的上部,不会钻入土中取食。24h后取玉米螟,检测基因表达情况。其中,dsRNA溶液为合成的亚洲玉米螟内源表达的K型丝氨酸蛋白酶抑制剂基因(KPIs)的dsRNA或dsEYFP(浓度分别为0.5mg/mL)。The Zhengdan 985 corn seed was planted in the nutrient mash. When the corn grows to the 3-leaf stage, the roots are irrigated with 0.5 mg/ml dsRNA solution. After 24 hours, the corn mash is connected, and each corn seedling is connected to the 2nd-instar corn mash. There are 10 larvae, and the corn borer mainly feeds on the corn leaf parts and the upper part of the stem, and does not penetrate into the soil to feed. After 24 h, corn mash was taken to detect gene expression. Among them, the dsRNA solution is a dsRNA or dsEYFP (concentration of 0.5 mg/mL) of K-type serine protease inhibitor gene (KPIs) endogenously expressed in synthetic Asian corn borer.
结果表明,玉米螟该基因的表达被显著下调(图3a)。用双链RNA处理24小时后,将亚洲玉米螟放在相应dsRNA处理过的玉米上连续取食5后的死亡率为43.33%(图3b及表6)。The results showed that the expression of this gene in corn borer was significantly down-regulated (Fig. 3a). After 24 hours of treatment with double-stranded RNA, the mortality of Asian corn borer on the corresponding dsRNA-treated corn after continuous feeding 5 was 43.33% (Fig. 3b and Table 6).
表6.亚洲玉米螟基因dsRNA浇灌玉米后对玉米螟的致死率Table 6. Lethality rate of corn borer after watering corn with Asian corn borer gene dsRNA
Figure PCTCN2014090946-appb-000015
Figure PCTCN2014090946-appb-000015
实施例5dsRNA稳定性及可降解性测试Example 5 dsRNA stability and degradability test
将合成好的dsRNA分别置于4℃、自然光照环境或遮光等三种条件下,结果表明,dsRNA在4℃条件下存放90天,没有发现明显的降解(图4a)。在室温避光保存的情况下,有部分降解,在90天时还能检测到50%的dsRNA(图4b和4c中的Shading)。室温光照情况下,45天开始明显降解,90天基本检测不到dsRNA(图4b和4c中的sunlight)。这些结果一方面说明双链RNA是一种相对稳定的制剂,可以保障制剂存放的稳定性以及应用后在一定时间内发挥作用,另一方面,在光照条件下,可以被较快降解,从而不会造成环境污染。The synthesized dsRNA was placed under 4 conditions of 4 ° C, natural light or shading, and the results showed that the dsRNA was stored at 4 ° C for 90 days, and no significant degradation was observed ( FIG. 4 a ). Partial degradation was observed at room temperature in the dark, and 50% of dsRNA was also detected at 90 days (Shading in Figures 4b and 4c). At room temperature, significant degradation began at 45 days, and dsRNA was not detected at 90 days (sunlight in Figures 4b and 4c). On the one hand, these results indicate that double-stranded RNA is a relatively stable preparation, which can ensure the stability of the storage of the preparation and play a role in a certain period of time after application. On the other hand, under light conditions, it can be degraded faster, thus not It will cause environmental pollution.
在本发明提及的所有文献都在本申请中引用作为参考,就如同每一篇文献被单独引用作为参考那样。此外应理解,在阅读了本发明的上述讲授内容之后,本领域技术人员可以对本发明作各种改动或修改,这些等价形式同样落于本申请所附权利要求书所限定的范围。 All documents mentioned in the present application are hereby incorporated by reference in their entirety in their entireties in the the the the the the the the In addition, it should be understood that various modifications and changes may be made by those skilled in the art in the form of the appended claims.

Claims (17)

  1. 一种将双链RNA(dsRNA)导入植物的方法,其特征在于,包括步骤:将所述的双链RNA施用于植物的根部,通过所述植物对双链RNA的根部吸收作用,使得所述双链RNA被所述植物吸入并输送到除根部之外的植株部分。A method for introducing a double-stranded RNA (dsRNA) into a plant, comprising the steps of: applying said double-stranded RNA to a root of a plant, said root-absorbing effect of said plant on double-stranded RNA, said Double-stranded RNA is inhaled by the plant and delivered to a portion of the plant other than the root.
  2. 一种提高植物抗虫性的方法,其特征在于,包括步骤:将抗虫性双链RNA(dsRNA)施用于植物的根部,使得所述抗虫性双链RNA被所述植物根部吸收,并输送到除根部之外的植株部分,从而提高植物的抗虫性。A method for improving plant resistance to insects, comprising the steps of: applying insect-resistant double-stranded RNA (dsRNA) to a root of a plant such that the insect-resistant double-stranded RNA is absorbed by the root of the plant, and It is transported to the parts of the plant other than the roots to increase the insect resistance of the plants.
  3. 如权利要求1或2所述的方法,其特征在于,所述的dsRNA是针对昆虫生长相关基因的dsRNA。The method according to claim 1 or 2, wherein the dsRNA is a dsRNA directed against an insect growth related gene.
  4. 如权利要求3所述的方法,其特征在于,所述的dsRNA如SEQ ID NOs.:4-6所示。The method of claim 3, wherein said dsRNA is as set forth in SEQ ID NOs.: 4-6.
  5. 如权利要求1或2所述的方法,其特征在于,所述的施用方式包括灌溉、浸泡、浇灌、或滴灌。A method according to claim 1 or 2, wherein said means of application comprises irrigation, soaking, watering, or drip irrigation.
  6. 如权利要求2所述的方法,其特征在于,所述的抗虫包括抗植食性害虫。The method of claim 2 wherein said insect resistance comprises an herbivorous pest.
  7. 如权利要求1或2所述的方法,其特征在于,所述的植物包括双子叶植物、单子叶植物、或裸子植物。The method according to claim 1 or 2, wherein the plant comprises a dicot, a monocot, or a gymnosperm.
  8. 一种农用组合物,其特征在于,所述的农用组合物包括杀虫有效量的抗虫性双链RNA和农药学上可接受的载体。An agricultural composition characterized in that the agricultural composition comprises a pesticidally effective amount of an insect resistant double-stranded RNA and a pesticidally acceptable carrier.
  9. 如权利要求8所述的农用组合物,其特征在于,所述dsRNA的施用浓度为0.0001-5mg/g或0.0001-5mg/ml,较佳地为0.001-1mg/ml或0.001-1mg/g。The agricultural composition according to claim 8, wherein the dsRNA is applied at a concentration of 0.0001 to 5 mg/g or 0.0001-5 mg/ml, preferably 0.001 to 1 mg/ml or 0.001-1 mg/g.
  10. 一种抗虫性双链RNA序列的用途,其特征在于,用于制备通过根部施用从而提高植物抗虫性的组合物。Use of an insect-resistant double-stranded RNA sequence for preparing a composition for enhancing insect resistance of a plant by root application.
  11. 一种分离的多核苷酸,其特征在于,所述的多核苷酸选自下组:An isolated polynucleotide, characterized in that said polynucleotide is selected from the group consisting of:
    (a)SEQ ID NO.:1-6任一所示的序列;(a) the sequence shown in any one of SEQ ID NO.: 1-6;
    (b)与(a)限定的序列互补的多核苷酸;或(b) a polynucleotide complementary to the sequence defined by (a); or
    (c)与(a)限定的序列具有至少70%((优选至少75%、80%、85%、90%,更优选至少95%、96%、97%、98%、99%)以上的序列一致性的任一多核苷酸或互补序列,其中,与所述任一多核苷酸序列互补的链的dsRNA经植食性害虫摄取后,具有抑制所述植食性害虫的生长的活性。(c) having at least 70% (preferably at least 75%, 80%, 85%, 90%, more preferably at least 95%, 96%, 97%, 98%, 99%) or more of the sequence defined by (a) Any polynucleotide or complementary sequence of sequence identity, wherein the dsRNA of the strand complementary to any of the polynucleotide sequences has an activity of inhibiting the growth of the herbivorous pest after ingestion by the herbivorous pest.
  12. 一种dsRNA构建物,其特征在于,所述dsRNA的构建物为双链,并且其正链或负链含有式I所示的结构: A dsRNA construct characterized in that the construct of the dsRNA is double-stranded and the positive or negative strand thereof comprises the structure of formula I:
    Seq正向-X-Seq反向 Seq forward- X-Seq reverse
    式IFormula I
    式中,In the formula,
    Seq正向为植食性害虫生长相关基因或片段的核苷酸序列;A nucleotide sequence Seq forward growth-related genes or fragments of phytophagous insects;
    Seq反向为与Seq正向基本上互补的核苷酸序列;Seq reverses to a nucleotide sequence that is substantially complementary to the Seq forward ;
    X为位于Seq正向和Seq反向之间的间隔序列,并且所述间隔序列与Seq正向和Seq反向不互补,X is a spacer sequence located between the forward and Seq Seq the reverse, and the spacer sequence Seq Seq forward and reverse are not complementary,
    其中,所述的植食性害虫生长相关基因选自:稻飞虱P450基因(Cyp18A1)、稻飞虱羧酸酯酶基因(carboxylesterase,Ces)、或亚洲玉米螟K型丝氨酸蛋白酶抑制剂基因(KPIs)。Wherein the plant-borne pest growth-related gene is selected from the group consisting of: a rice planthopper P450 gene (Cyp18A1), a rice locust carboxylasease (Ces), or an Asian corn borer K-serine protease inhibitor gene (KPIs). ).
  13. 如权利要求12所述的dsRNA构建物,其特征在于,所述dsRNA构建物可形成式II所示的dsRNA,The dsRNA construct of claim 12, wherein the dsRNA construct forms a dsRNA of formula II,
    Figure PCTCN2014090946-appb-100001
    Figure PCTCN2014090946-appb-100001
    式中,In the formula,
    Seq'正向为Seq正向序列对应的RNA序列或序列片段;Seq 'Forward Forward sequence corresponds to Seq RNA sequences or fragments of sequences;
    Seq'反向为与Seq'正向基本上互补的序列;Seq' reverse is a sequence that is substantially complementary to the Seq'forward;
    X'为无;或为位于Seq'正向和Seq'反向之间的间隔序列,并且所述间隔序列与Seq'正向和Seq'反向不互补,X 'is absent; or located Seq' forward and Seq 'spacer sequence between the reverse, and the spacer sequence Seq' forward and Seq 'no reverse complementary,
    ||表示在Seq正向和Seq反向之间形成的氢键。|| represents a hydrogen bond formed between the Seq forward and the Seq reverse .
  14. 一种表达载体,其特征在于,所述表达载体含有权利要求12所述的dsRNA构建物。An expression vector comprising the dsRNA construct of claim 12.
  15. 一种遗传工程化的宿主细胞,其特征在于,所述宿主细胞中含有权利要求14所述的表达载体或者染色体中整合有对应于权利要求12所述的dsRNA构建物的DNA序列。A genetically engineered host cell comprising the expression vector of claim 14 or a DNA sequence incorporating a dsRNA construct according to claim 12 in a chromosome.
  16. 一种dsRNA序列,其特征在于,所述dsRNA序列是抗虫性dsRNA,并且其长度为100-800bp,较佳地为150-600bp。A dsRNA sequence characterized in that the dsRNA sequence is an insect resistant dsRNA and has a length of from 100 to 800 bp, preferably from 150 to 600 bp.
  17. 一种防治害虫的方法,其特征在于,将权利要求8所述的农用组合物或权利要求16所述的dsRNA施用于需要防治害虫的植物。 A method for controlling pests, which comprises applying the agricultural composition of claim 8 or the dsRNA of claim 16 to a plant in need of pest control.
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