WO2013181834A1 - Dreb1 transcription factor of cotton and coding gene and application thereof - Google Patents

Dreb1 transcription factor of cotton and coding gene and application thereof Download PDF

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WO2013181834A1
WO2013181834A1 PCT/CN2012/076626 CN2012076626W WO2013181834A1 WO 2013181834 A1 WO2013181834 A1 WO 2013181834A1 CN 2012076626 W CN2012076626 W CN 2012076626W WO 2013181834 A1 WO2013181834 A1 WO 2013181834A1
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plant
seq
nucleotide sequence
expression vector
tobacco
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PCT/CN2012/076626
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French (fr)
Chinese (zh)
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崔洪志
王建胜
何云蔚
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创世纪转基因技术有限公司
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Priority to PCT/CN2012/076626 priority Critical patent/WO2013181834A1/en
Priority to CN201280001631.4A priority patent/CN103842375B/en
Publication of WO2013181834A1 publication Critical patent/WO2013181834A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/415Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from plants
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8271Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
    • C12N15/8273Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for drought, cold, salt resistance

Definitions

  • the present invention relates to plant transcription factors and coding genes thereof and applications thereof, and in particular to a cotton-derived
  • BACKGROUND OF THE INVENTION Abiotic stresses, such as drought, salting, extreme temperature, chemical pollution and oxygen damage, can cause serious damage to plant growth and development, and cause great loss to crop yield, among which drought has an impact on crop yield. It takes the first place in natural adversity, and its harm is equivalent to the sum of other disasters. It is the bottleneck of agricultural development in many areas. According to statistics, the world's dry and semi-dry areas account for 34% of the land area; China's dry and semi-arid areas account for 52% of the country's land area, and the annual area is 20 to 2.7 million hectares. About 3 billion cubic meters, less than 300-400 million kilograms of food due to lack of water; especially China's main grain-producing areas such as North China, Northeast China and Northwest China are the most severe areas in China, and the spring drought frequently reaches 10 years. .
  • genes and their expression products can be divided into three categories: (1) genes and products involved in signal cascade amplification and transcriptional control; (2) genes and their expression products that directly contribute to the protection of biofilms and proteins; ) Proteins associated with the uptake and transport of water and ions.
  • genes and products involved in signal cascade amplification and transcriptional control (2) genes and their expression products that directly contribute to the protection of biofilms and proteins; ) Proteins associated with the uptake and transport of water and ions.
  • proteins associated with the uptake and transport of water and ions Proteins associated with the uptake and transport of water and ions.
  • DREB1 and DREB2 Two transcrip tion facto rs, DREB1 and DREB2, w ith an EREBP/AP2 DNA binding domain, separate two cellular signal transduction pathways in drought-and low temperature-responsive gene exp ression , respectively, in A rabidopsis. Plant Cell, 10: 1391-1406; KAN GJY.2002.
  • the present inventors cloned a DNA sequence encoding a DREB (dehydration responsive element binding protein) transcription factor (designated herein as GhCBFl) using a combination of SSH and RACE. It was found that the introduction of the transgenic plants significantly improved the cold resistance and early resistance of the transgenic plants, and these traits were stably inherited.
  • DREB dehydration responsive element binding protein
  • a first aspect of the invention provides a DREB-like transcription factor GhCBF1 of cotton having the sequence SEQ ID NO: l o
  • a second aspect of the invention provides a nucleotide sequence encoding the transcription factor of the first aspect of the invention.
  • the nucleotide sequence has the nucleotide sequence shown in SEQ ID NO: 2.
  • a third aspect of the invention provides a recombinant expression vector comprising the nucleotide sequence of the second aspect of the invention and the nucleotide sequence is operably linked to an expression control sequence of the expression vector; preferably, The vector is the rd29A-GhCBF 1-2300 vector shown in Figure 2.
  • a fourth aspect of the present invention provides a recombinant cell comprising the nucleotide sequence of the second aspect of the present invention or the recombinant expression vector of the third aspect of the present invention; preferably, the recombinant cell is a recombinant Agrobacterium cell .
  • a method for improving cold tolerance and/or early resistance of a plant according to the fifth aspect of the invention comprising: introducing the nucleotide sequence of the second aspect of the invention or the recombinant expression vector of the third aspect of the invention into a plant or Plant tissue and expression of the gene; preferably, the plant is tobacco.
  • a method for producing a transgenic plant according to a sixth aspect of the present invention comprising: cultivating a plant comprising the nucleotide sequence of the second aspect of the present invention, the recombinant expression vector of the third aspect of the present invention, under conditions effective for producing a plant Or plant tissue; preferably, the plant is tobacco.
  • a seventh aspect of the present invention provides the transcription factor of the first aspect of the present invention, the nucleoside of the second aspect of the present invention
  • the acid sequence, the recombinant expression vector of the third aspect of the invention or the recombinant cell of the fourth aspect of the invention for improving cold tolerance and/or early resistance of the plant and for use in plant breeding; preferably, said The plant is tobacco.
  • Fig. 1 is a construction flow of a plant expression vector (rd29A-GhCBF1-2300) of GhCBF1.
  • Figure 2 is a plasmid map of the plant expression vector (rd29A-GhCBF1-2300) of GhCBF1.
  • FIG. 3 shows the experimental results of cold resistance of transgenic tobacco.
  • the left side of the figure is the transgenic plant (TJ1-3); the right side is the non-transgenic plant (control).
  • Figure 4 shows the experimental results of drought resistance of transgenic tobacco.
  • the left side of the figure is the transgenic plants (TJ4-15); the right side is the non-transgenic plants (control).
  • BEST MODE FOR CARRYING OUT THE INVENTION The present invention will be further illustrated by the following non-limiting examples.
  • Test materials - ⁇ cotton 14 (National Cotton Medium Term Bank, obtained by the China Cotton Research Institute, Uniform No.: ZM-30270) sown on sterilized vermiculite at 25 ° C, photoperiod 16 h / 8 h conditions Under the culture, 1/2 MS medium (9.39 mM KN0 3 , 0.625 mM KH 2 P0 4 , 10.3 mM NH 4 N0 3 , 0.75 mM MgS0 4 , 1.5 mM CaCl 2 , 50 ⁇ M KI, lOOu MH3BO3, 100 uMMnSO 4 per week) , 30 uM ZnSO 4 , 1 u MNa 2 Mo0 4 , 0.1 u M CoCl 2 , 100 MNa 2 EDTA, 100 MFeSO 4 ) once. It was used for experiments when the seedlings were as high as 25-30 cm.
  • the test seedlings were divided into 2 groups, 4 pots per group and 1 pot per pot.
  • the first group was the control group, cultured at 25 ° C, light.
  • the second group was a low temperature treatment group, which was treated at 4 ° C for 6 hours at low temperature and cultured in light. After the treatment, the leaves of the top 1/3 of the seedlings of the two groups were cut out in time, quickly frozen with liquid nitrogen, and stored in a -70 °C refrigerator.
  • the second PCR product of the combined forward subtractive hybridization cDNA fragment (QIAquick PCR Purification Kit purified from Qiagen) was ligated with pGEM-T Easy vector (purchased from Promega) according to the pGEM-T Easy kit product specification.
  • the specific steps are as follows: the following components are sequentially added by using a 200 ul PCR tube: the second PCR product of the purified cDNA fragment is 3 ul, the T4 ligase buffer is 5 ul, the pGEM-T Easy vector is ul, the T4 DNA ligase is lul, at 4 °C overnight.
  • the reaction product was ligated to ⁇ competent Escherichia coli JM109 (purchased from TAKARA), ice bath for 30 min, heat shock for 60 s, ice bath for 2 min, and 250 ⁇ L LB medium (1% Tryptone was purchased from OXOID, 0.5).
  • % Yeast Extract was purchased from OXOID, 1% NaCl was purchased from Sinopharm. It was placed in a 37 °C shaker, 225 r/min was shaken for 30 min, and 200 ⁇ M solution was added to 50 ⁇ g/mL ampicillin, 40 ug/mL.
  • X-gal, 24 ug/mL IPTG (X-gal/IPTG was purchased from TAKARA) on LB (ibid.) solid culture plates, incubated at 37 °C for 18 h. Count the number of clear white and blue colonies with a diameter > 1 mm in the culture plate, and randomly pick 200 white colonies (number: Gh-C001 to Gh-C200) in 96 LB liquid medium containing 50 ug/mL ampicillin. In a well cell culture plate (CORNING), incubated at 37 ° C overnight, glycerol was added to a final concentration of 20%, and stored at -80 ° C for later use.
  • CORNING well cell culture plate
  • Nested PCR primer Primer 1 (PCR-selectTM cDNA Subtraction Kit kit) and Primer 2R (PCR-selectTM cDNA Subtraction Kit kit) were used for PCR amplification of PBS. Cloning, sequencing of all positive clones sent to Yingjie Jieji (Shanghai) Trading Co., Ltd.
  • GhCBFl GSP1 SEQ ID NO: 4:
  • GhCBFl GSP2 SEQ ID NO: 5:
  • the first round of PCR amplification was carried out using SEQ ID NO: 4 and the 3' primer AUAP (provided with the kit), using mRNA reverse transcribed cDNA as a template.
  • the specific steps are as follows: Ex Taq purchased from TAKARA, 50 ⁇ 1 ⁇ Reaction system: 5 ⁇ ⁇ Buffer, 3 ⁇ 2.5 mM dNTP, 2.0 ⁇ mRNA reverse transcribed cDNA, 1.0 ⁇ Ex Taq, 10 ⁇ primer SEQ ID NO : 4 and AUAP each 2.0 ⁇ 1, and 35 ⁇ double distilled water.
  • PCR reaction conditions 94 °C Pre-denaturation for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min.
  • the obtained PCR product was diluted 100-fold with double-distilled water, and 2.0 ⁇ l was used as a template, and the second round of PCR amplification was carried out using SEQ ID NO: 5 and 3, the terminal primer AUAP, and the specific steps were as follows: 50 ⁇ ⁇ Reaction system: 5 ⁇ ⁇ Buffer, 3 ⁇ 2.5 mM dNTP, 2.0 ⁇ first round of diluted PCR product, 1.0 ⁇ Ex Taq, 10 ⁇ primers SEQ ID NO: 5 and AUAP each 2.0 ⁇ l, and 35 ⁇ double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min.
  • the second PCR product (QIAquick PCR Purification Kit purified from Qiagen) was ligated to pGEM-T Easy Vector, transformed into E. coli JM109 (specifically the same as above), and 10 white colonies were randomly picked up to contain 50 ug/mL ampicillin.
  • the penicillin was cultured in LB liquid medium, cultured at 37 ° C overnight, and then glycerin was added to a final concentration of 20%, and stored at -80 ° C until use.
  • SEQ ID NO: 5 and 3' primer AUAP were used for PCR amplification (system and conditions are the same as above), and 5 positive clones were obtained, which were sent to Yingji Jieji (Shanghai) Trading Co., Ltd. for sequencing, and 3 of the cDNA of the gene was obtained. 'end.
  • GhCBFl GSP3 SEQID O: 6:
  • GhCBFl GSP4 SEQID O: 7:
  • GhCBFl GSP5 SEQID O: 8:
  • SEQ ID NO: 6 is a primer that is reverse transcribed into cDNA into mRNA.
  • the first round of PCR amplification was carried out using SEQ ID NO: 7 and 5' universal primer AAP (provided with the kit), and cDNA reverse transcription cDNA (reverse transcription primer SEQ ID NO: 6) was used as a template.
  • the specific steps are as follows: Ex Taq Purchased from TAKARA, 50 ⁇ PC Reaction system: 5 ⁇ ⁇ Buffer, 3 ⁇ 2.5 mM dNTP, 2.0 ⁇ total RNA reverse transcribed cDNA, 1.0 10 ⁇ of the primers SEQ ID NO: 7 and AAP each 2.0 ⁇ l, and 35 ⁇ of double distilled water.
  • PCR reaction conditions predenaturation at 94 °C for 5 min; 94 ⁇ denaturation for 30 s, annealing at 55 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; 72 "C extension for 10 min.
  • the obtained PCR product was diluted 100-fold with double distilled water, and then 2.0 ⁇ L was used as a template.
  • the second round of PCR amplification was carried out with SEQ ID NO: 8 and the 3' primer AUAP.
  • the specific steps were as follows: 50 l PCR reaction system: 5 ⁇ ⁇ Buffer, 3 ⁇ 2.5 mM dNTP, 2.0 ⁇ first round of diluted PCR product, 1.0 ⁇ Ex Taq, 10 ⁇ SEQ ID NO: 8 and AUAP were each 2.0 ⁇ l, and 35 ⁇ of double distilled water.
  • PCR reaction conditions predenaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min.
  • the second PCR product (QIAquick PCR Purification Kit purified from Qiagen) was ligated to pGEM-T Easy Vector, transformed into JM109 (specific method as above), and 10 white colonies were randomly picked up to contain 50 ug/mL ampicillin. Incubate in LB liquid medium, incubate at 37 °C overnight, add glycerol to a final concentration of 20%, and store at -80 °C until use.
  • SEQ ID NO: 8 and the 3' primer AUAP were used for PCR amplification (reaction system and reaction conditions as above), and 4 positive clones were obtained and sent to Guangzhou Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing. The 5' end of the cDNA.
  • the obtained 5 ' RACE product was cloned and sequenced, and spliced with the 3 ' RACE product sequencing result.
  • the full-length cDNA sequence of GhCBF1 was obtained.
  • a pair of primers were designed based on the full-length cDNA sequence of GhCBF1 as follows:
  • GhCBFIR SEQ ID NO: 10:
  • the full length of the GhCBF1 encoding gene was cloned by SEQ ID NO: 9 and B SEQ ID NO: 10.
  • PCR was performed using TaKaRa's PrimeSTAR HS DNA polymerase and cotton cDNA as a template.
  • 50 l PCR reaction system 10 1 5 X PS Buffer, 3 ⁇ 1 2.5 mM continuous P, 2.0 1 cDNA, ⁇ . ⁇ ⁇ 1 PrimeSTAR, 10 ⁇ M primer SEQ ID NO: 9 and SEQ ID NO: 10 2.0 ⁇ l, 30 ⁇ each of double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 60 s, 33 cycles; extension at 72 °C for 10 min.
  • the PCR amplification product was added with A: PCR product plus 2.5 times absolute ethanol, placed at -20 ° C for 10 minutes, centrifuged, de-cleared, air-dried, and dissolved in 21 ⁇ l of double distilled water. Add 2.5 ul 10 X Ex Buffer, 0.5 ul 5 mM dATP, 2.5 ul lO X Ex Taq. Reaction conditions: The reaction was carried out at 70 ° C for 30 minutes. A DNA fragment of about 600 bp was recovered (Omega recovery kit), cloned into pGEM T-easy vector, and transformed into JM109C method as above). Ten white colonies were randomly picked and cultured in LB liquid medium containing 50 ug/mL ampicillin.
  • SEQ ID NO: 9 and SEQ ID NO: 10 were used for bacterial liquid PCR amplification (reaction system and reaction conditions are the same as above), and 4 positive clones were obtained, which were sent to Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing, and the sequence was SEQ ID NO. : 2. Its protein expression sequence is SEQ ID NO: 1. Amino acid sequence of GhCBF1: SEQ ID NO: 1 1 MAAETAETPS SSSEEVYSLA
  • Nucleotide sequence of the GhCBF1 encoding gene SEQ ID NO: 2
  • the plant expression vector rd29A-GhCBFl-2300 was constructed as shown in Figure 1.
  • the plant binary expression vector pCAMBIA2300 (purchased from Beijing Dingguo Changsheng Biotechnology Co., Ltd.) was selected as a plant expression vector, and the Pnos promoter was used to replace the 35S promoter of the PTII gene containing the double enhancer to reduce the expression of prion protein in plants.
  • Inducible promoter rd29A and Tnos were selected as promoters of GhCBF1 gene Sub and terminator. Specific steps are as follows:
  • Pnos was amplified using the plant expression vector PBI121 (purchased from Beijing Huaxia Ocean Technology Co., Ltd.) using SEQ ID NO: 11 and SEQ ID NO: 12, using TaKaRa's PrimeSTAR HS DNA polymerase.
  • PCR reaction conditions predenaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 56 °C for 30 s, extension at 72V for 30 s, 33 cycles; extension at 72 °C for 10 min, product ligated by EcoRI, Bglll pCAMBIA2300-1 was obtained by pCAMBIA2300 (promega T4 ligase cassette).
  • Tnos was amplified using SEQ ID NO: 13 and SEQ ID NO: 14 with PBI121 as a template, using TaKaRa's PrimeSTAR HS DNA polymerase.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min; denaturation at 94 V for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 30 s, 33 cycles; extension at 72 °C for 10 min.
  • the product was cleaved by Sacl, EcoRI and ligated into pCAMBIA2300-1 to obtain pCAMBIA2300-2.
  • PCR reaction system 10 ⁇ 5 ⁇ PS Buffer, 3 ⁇ 2.5 mM dNTP, 1.0 ⁇ Arabidopsis DNA, 1.0 ⁇ PrimeSTAR 10 ⁇ primers SEQ ID NO: 15 and SEQ ID NO: 16 each 2.0 ⁇ l, and 31 ⁇ Double steamed water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72V for 30 s, 33 cycles; extension at 72 °C for 10 min, PCR products were digested by HindIII, Sail Connect to pCAMBIA2300-2 to obtain pCAMBIA2300-3.
  • the GhCBF1 gene was amplified using SEQ ID NO: 17 and SEQ ID NO: 18 (template was the pGEM T-easy recombinant vector containing the GhCBF1 gene obtained in Example 1), and TaKaRa's PrimeSTAR HS DNA polymerase was used. 50 ⁇ PCR reaction system: 10 ⁇ 5 ⁇ PS Buffer , 3 ⁇ 2.5 mM dNTP, 1.0 ⁇ GhCBF1-pGEM, 1.0 ⁇ PrimeSTAR, 10 ⁇ primers SEQ ID NO: 17 and SEQ ID NO: 18 each 2.0 ⁇ 1, and 31 ⁇ ⁇ double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min.
  • the plant expression vector, rd29A-GhCBFl-2300 was obtained by cleavage of Sall and Sacl to pCAMBIA2300-3.
  • Agrobacterium tumefaciens LBA4404 (purchased from Biovector Science Lab, Inc) Competent preparation: Agrobacterium LBA4404 was placed on LB solid medium containing 5 ( ⁇ g/ml rifampicin and 5 ( ⁇ g/ml streptomycin) 1-2d in advance. Single spotted inoculation, cultured at 28 °C for 1 to 2 days. Pick a single colony and inoculate 5 ml of LB liquid medium containing 50 ⁇ ⁇ / ⁇ 1 rifampicin and 50 ⁇ ⁇ / ⁇ 1 streptomycin, and shake overnight at 28 °C (about 12 -16h) to an OD600 value of 0.4, to form a seed bacterial solution.
  • Centrifuge at 4000g for 10min at 4°C discard the supernatant; add a certain amount of pre-cooled 10% glycerol resuspended bacteria Body, centrifuged at 4000g for 10min at 4 °C for 10min, collect the precipitate; wash 3-4 times with 10% glycerol; add the appropriate amount of ice bath pre-cooled 10% glycerol to resuspend the bacterial pellet, dispense it in 40 ⁇ 1/tube, at - Store at 70 ° C for later use.
  • Transformation of Agrobacterium The competent cells were thawed on ice, and ⁇ rd29A-GhCBF 1-2300 plasmid was added to 40 ⁇ l of competent cells, and the mixture was mixed and ice bathed for about 10 min. Transfer the mixture of competent and DNA to a pre-cooled electric shock cup with a gun and tap to bring the suspension to the bottom, taking care not to have air bubbles. Place the electric shock cup (purchased from bio-rad) on the slide of the electric shock chamber and push the slide to place the electric shock cup on the base electrode of the electric shock chamber. When using a 0.1cm electric shock cup, the program of the MicroPulser (purchased from bio-rad) is set to "Agr" and the electric shock is applied once.
  • the sterile tobacco seeds were placed in MS solid medium (18.78 mM KN0 3 , 1.25 mM KH 2 P0 4 , 20.6 mM NH4NO3, 1.5 mM MgS0 4 , 3.0 mM CaCl 2 , 50 ⁇ M KI, 100 ⁇ M H3BO3 , 100 ⁇ M MnS0 4 , 30 ⁇ M ZnS0 4 , 1 M Na 2 Mo0 4 , 0.1 u M CoCl 2 , 100 ⁇ M Na 2 EDTA, 100 u M FeSO 4 , 7.4 g/L agar, sucrose 30 g L)
  • the bacteria are germinated to prepare sterile seedlings.
  • the leaves of the sterile seedlings were cut into 5 mm X 5 mm leaf discs, and the leaf discs were inoculated with Agrobacterium containing the expression vector in the logarithmic growth phase for 10 min, and the bacterial liquid was absorbed and co-cultured for 2 days in the dark (MS medium). ).
  • the leaves were transferred to a differentiation medium (MS + 1 mg / L BA + 0.1 mg / L NAA + 50 mg / L kanamycin + 500 mg / L cephalosporin), cultured under light conditions for about 45 days, to grow buds
  • transfer to rooting medium MS+50mg/L kanamycin+500mg/L cephalosporin
  • the seedlings are transferred to only 500mg/L cephalosporin. The number was saved on the MS medium.
  • the obtained transgenic tobacco leaves were extracted, and genomic DNA was extracted (the Arabidopsis thaliana DNA extraction method in Example 3), and PCR was carried out using primers SEQ ID NO: 17 and SEQ ID NO: 18 (50 ⁇ PCR reaction system: 5 ⁇ ⁇ Buffer, 3 ⁇ 2.5 mM dNTP, 2.0 ⁇ DNA, 1.0 ⁇ Ex Taq, 10 ⁇ primers SEQ ID NO: 17 and SEQ ID NO: 18 each 2.0 ⁇ l, and 35 ⁇ double distilled water.
  • T Q generation transgenic tobacco T Seeds of J1, TJ2, TJ3, TJ4 and ToJ5 and wild-type non-transgenic control tobacco seeds were sown on vermiculite, 25 ⁇ , 10 hours light culture/14 hours dark culture cycle, and 1/2 MS medium was poured every 5 days. After culturing for 25 days, the lowest leaf was extracted, and genomic DNA was extracted (the Arabidopsis DNA extraction method in Example 3), and PCR was identified using primers SEQ ID NO: 17 and SEQ ID NO: 18 (reaction and conditions are the same as above) ), the negative plants were removed (the same leaves were taken from the control tobacco).
  • transgenic tobacco (TJ1, TJ2, TYJ3, TJ4 and TJ5 each 10 strains, numbered TJ1-1 To TJl-lC TJ2-1 to 1 ⁇ 2-10, TiJ3-lSTiJ3-10, TJ4-1 to TJ4-10 and TJ5-1 to TJ5-10), control tobacco (10 strains) were subjected to cold resistance experiments.
  • the cold resistance of the above T-transgenic plants showed that the control plants could not resume normal growth, and the growth was significantly inhibited, while the transgenic plants grew significantly higher than the control plants, showing obvious cold resistance (Fig. 3 and Table 1).
  • the selection of transgenic plants ⁇ 1-3 and a control tobacco exemplarily showed that the results of other tobaccos were similar to them.
  • Example 7 Drought-resistant simulation experiment and functional identification of transgenic tobacco overexpressing GhCBF1
  • the sterilized vermiculite was soaked in 1/2 MS medium. Will T. Generation of genetically modified tobacco T. J1, TJ2, TJ3, T. Seeds of J4 and J5 and control tobacco seeds were separately sown on vermiculite, 25 ⁇ , 10 hours light culture/14 hours dark culture cycle, 1/2 MS was poured every 5 days, and after 25 days of culture, the lowermost leaves were taken. Genomic DNA was extracted (the Arabidopsis thaliana DNA extraction method in the same manner as in Example 3), and PCR was performed using primers SEQ ID NO: 17 and SEQ ID NO: 18, and the negative plants were knocked out (the control tobacco also extracted a leaf).
  • transgenic tobacco (TJ1, TJ2, TiJ3, T!J4 and TJ5 each 10, numbered ⁇ - to ⁇ ., 1 ⁇ 2- 11 to 1 ⁇ 2-20, T!Dl l to TiJ3-20, TJ4-11 to TJ4-20 and TJ5-11 to ⁇ 5-20), and control tobacco (10 strains) were tested for drought tolerance.
  • the drought resistance of the above-mentioned transgenic plants showed that the control plants were wilting, and the transgenic plants were able to grow normally, showing significant drought resistance (Fig. 4 and Table 1).
  • the selection of the transgenic plants TJ4-15 and a control tobacco showed that the results of other tobaccos were similar.

Abstract

A DREB1 transcription factor GhCBF1 derived from cotton and a coding gene thereof are provided. An application of the transcription factor in cultivating transgenic plants with stress tolerance such as improved cold tolerance and drought resistance is further provided.

Description

棉花的一个 DREB1类转录因子及其编码基因与应用 技术领域 本发明涉及植物转录因子及其编码基因与应用, 特别是涉及一个来源于棉花的 FIELD OF THE INVENTION The present invention relates to plant transcription factors and coding genes thereof and applications thereof, and in particular to a cotton-derived
DREB1类转录因子 GhCBFl及其编码基因, 以及其在培育耐逆性提高的转基因植物中的 应用。 背景技术 非生物胁迫, 如干旱、盐渍、极端温度、化学污染和氧损伤等能够对植物的生长发育 造成严重的危害, 对作物产量造成极大损失, 其中干旱对作物产量的影响,在诸多自然逆 境中占首位, 其危害相当于其它灾害之和, 是许多地区是农业发展的瓶颈。据统计, 世界 干早、 半干早地区占陆地面积的 34%; 我国干早、 半干旱地区约占国土面积的 52%, 年受 早面积达 20〜270万公顷 , 全国灌溉区每年缺水约 30亿立方米, 因缺水而少收粮食 350〜 40亿公斤; 特别是我国主要产粮区如华北、 东北和西北, 是我国缺水最严重的地区, 春旱 频繁达到十年九遇。 The DREB1 transcription factor GhCBF1 and its coding gene, and its application in the cultivation of transgenic plants with improved tolerance. BACKGROUND OF THE INVENTION Abiotic stresses, such as drought, salting, extreme temperature, chemical pollution and oxygen damage, can cause serious damage to plant growth and development, and cause great loss to crop yield, among which drought has an impact on crop yield. It takes the first place in natural adversity, and its harm is equivalent to the sum of other disasters. It is the bottleneck of agricultural development in many areas. According to statistics, the world's dry and semi-dry areas account for 34% of the land area; China's dry and semi-arid areas account for 52% of the country's land area, and the annual area is 20 to 2.7 million hectares. About 3 billion cubic meters, less than 300-400 million kilograms of food due to lack of water; especially China's main grain-producing areas such as North China, Northeast China and Northwest China are the most severe areas in China, and the spring drought frequently reaches 10 years. .
由于植物的耐胁迫性大多属于数量性状, 现有可利用的种质资源匮乏, 采用常规育 种技术改良植物胁迫耐性的难度相当大, 培育出真正的耐胁迫品种就尤为困难。 近年来, 随着对植物抗逆分子机理研究的不断深入和分子生物学技术的迅猛发展, 抗逆研究已经 从生理水平深入到分子水平, 促进了植物抗逆基因工程的发展。当植物在受到胁迫时会产 生相应的应答反应, 来降低或消除给植株带来的危害。植物的这种应答反应是一个涉及多 基因、 多信号途径、 多基因产物的复杂过程。 这些基因及其表达产物可以分为 3 类: (1) 参与信号级联放大系统和转录控制的基因及产物; (2)直接对保护生物膜和蛋白质起作用 的基因及其表达产物; (3 ) 与水和离子的摄入和转运相关的蛋白质。 近年来, 通过转基 因技术提高植物对胁迫耐受能力的研究, 以及对胁迫具有耐受能力的农作物、旱生植物和 盐生植物的研究都取得了显著的成果, 对胁迫相关基因和信号转导系统也有了更进一步 的了解 (Liu Q.1998. Two transcrip tion facto rs,DREBl and DREB2,w ith an EREBP/AP2 DNA binding domain, separate two cellular signal transduction pathways in drought-and low temperature-responsive gene exp ression, respectively, in A rabidopsis. Plant Cell, 10: 1391-1406; KAN GJY.2002. A rabid op sis basic leucine zipper p ro teins that mediate stress2responsive abscisic acid signaling。 Plant Cell, 14: 343- 357; ABE H.2003.A rabid op sis AtMYC2 (bHLH) and AtMYB2(MYB) function as transcrip tional activato rs in abscisic acid signaling. Plant Cell, 15: 63-78. ) 。 Since the stress tolerance of plants is mostly quantitative, the available germplasm resources are scarce. It is very difficult to improve the stress tolerance of plants by conventional breeding techniques. It is especially difficult to cultivate true stress-tolerant varieties. In recent years, with the deepening of research on the molecular mechanism of plant stress resistance and the rapid development of molecular biology technology, stress resistance research has progressed from physiological level to molecular level, which promoted the development of plant stress resistance genetic engineering. When plants are stressed, they will respond accordingly to reduce or eliminate the damage to plants. This response of plants is a complex process involving multiple genes, multiple signaling pathways, and multiple gene products. These genes and their expression products can be divided into three categories: (1) genes and products involved in signal cascade amplification and transcriptional control; (2) genes and their expression products that directly contribute to the protection of biofilms and proteins; ) Proteins associated with the uptake and transport of water and ions. In recent years, studies on the ability of plants to improve stress tolerance through transgenic techniques, as well as studies on stress-tolerant crops, xerophytes and halophytes have yielded significant results for stress-related genes and signal transduction. The system has a further understanding (Liu Q.1998. Two transcrip tion facto rs, DREB1 and DREB2, w ith an EREBP/AP2 DNA binding domain, separate two cellular signal transduction pathways in drought-and low temperature-responsive gene exp ression , respectively, in A rabidopsis. Plant Cell, 10: 1391-1406; KAN GJY.2002. A rabid op sis basic leucine zipper p ro teins that mediate Stress2responsive abscisic acid signaling. Plant Cell, 14: 343-357; ABE H.2003.A rabid op sis AtMYC2 (bHLH) and AtMYB2(MYB) function as transcrip tional activato rs in abscisic acid signaling. Plant Cell, 15: 63-78.
但就目前的研究状况而言, 由于其机制十分复杂,许多植物对逆境下的生物化学和生 理学上的响应机制仍有待深入研究。 在抗逆应答基因的功能及表达调控方面的研究占多 数, 但抗逆相关的信号传递途径之间的联系以及整个信号传递网络系统的机理还有待进 一步研究。 虽然许多研究机构通过现代生物技术, 获得了各类具有一定抗逆能力的转基 因植物, 但还未达到产业化的标准。 因此在提高植物抗逆性方面, 还有许多工作需要做。  However, as far as the current research situation is concerned, due to the complexity of its mechanism, the biochemical and physiologic response mechanisms of many plants to stress remain to be further studied. Studies on the function and expression regulation of stress-responsive genes account for the majority, but the link between stress-resistance-related signaling pathways and the mechanism of the entire signaling network system remains to be further studied. Although many research institutes have acquired a variety of transgenic plants with certain resilience through modern biotechnology, they have not yet reached the standard of industrialization. Therefore, there is still much work to be done to improve plant stress resistance.
发明内容 本发明人利用 SSH与 RACE相结合的方法克隆出了棉花的一个 DREB (脱水应答元 件结合蛋白, dehydration responsive element binding protein) 类转录因子 (本文命名为 GhCBFl ) 的编码基因的 DNA序列。 并发现将其导入转基因植株后, 可明显改善转基因 植株的抗寒性和抗早性, 而且这些性状可稳定遗传。 SUMMARY OF THE INVENTION The present inventors cloned a DNA sequence encoding a DREB (dehydration responsive element binding protein) transcription factor (designated herein as GhCBFl) using a combination of SSH and RACE. It was found that the introduction of the transgenic plants significantly improved the cold resistance and early resistance of the transgenic plants, and these traits were stably inherited.
本发明第一方面提供棉花的一个 DREB类转录因子 GhCBFl,其序列为 SEQ ID NO: l o  A first aspect of the invention provides a DREB-like transcription factor GhCBF1 of cotton having the sequence SEQ ID NO: l o
本发明第二方面提供编码本发明第一方面所述的转录因子的核苷酸序列。 优选地, 所述核苷酸序列具有 SEQ ID NO: 2所示的核苷酸序列。  A second aspect of the invention provides a nucleotide sequence encoding the transcription factor of the first aspect of the invention. Preferably, the nucleotide sequence has the nucleotide sequence shown in SEQ ID NO: 2.
本发明第三方面提供一种重组表达载体, 其含有本发明第二方面所述的核苷酸序列 并且所述核苷酸序列与所述表达载体的表达控制序列可操作地连接; 优选地, 所述载体 为附图 2所示的 rd29A-GhCBF 1-2300载体。  A third aspect of the invention provides a recombinant expression vector comprising the nucleotide sequence of the second aspect of the invention and the nucleotide sequence is operably linked to an expression control sequence of the expression vector; preferably, The vector is the rd29A-GhCBF 1-2300 vector shown in Figure 2.
本发明第四方面提供一种重组细胞, 其含有本发明第二方面所述的核苷酸序列或者 本发明第三方面所述的重组表达载体; 优选地, 所述重组细胞为重组农杆菌细胞。  A fourth aspect of the present invention provides a recombinant cell comprising the nucleotide sequence of the second aspect of the present invention or the recombinant expression vector of the third aspect of the present invention; preferably, the recombinant cell is a recombinant Agrobacterium cell .
本发明第五方面一种改善植物耐寒性和 /或抗早性的方法, 包括: 将本发明第二方面 所述的核苷酸序列或者本发明第三方面所述的重组表达载体导入植物或植物组织并使所 述基因表达; 优选地, 所述植物是烟草。  A method for improving cold tolerance and/or early resistance of a plant according to the fifth aspect of the invention, comprising: introducing the nucleotide sequence of the second aspect of the invention or the recombinant expression vector of the third aspect of the invention into a plant or Plant tissue and expression of the gene; preferably, the plant is tobacco.
本发明第六方面一种制备转基因植物的方法, 包括: 在有效产生植物的条件下培养 含有本发明第二方面所述的核苷酸序列、 本发明第三方面所述的重组表达载体的植物或 植物组织; 优选地, 所述植物是烟草。  A method for producing a transgenic plant according to a sixth aspect of the present invention, comprising: cultivating a plant comprising the nucleotide sequence of the second aspect of the present invention, the recombinant expression vector of the third aspect of the present invention, under conditions effective for producing a plant Or plant tissue; preferably, the plant is tobacco.
本发明第七方面提供本发明第一方面所述的转录因子、 本发明第二方面所述的核苷 酸序列、 本发明第三方面所述的重组表达载体或者本发明第四方面所述的重组细胞用于 改善植物耐寒性和 /或抗早性以及用于植物育种的用途; 优选地, 所述植物是烟草。 A seventh aspect of the present invention provides the transcription factor of the first aspect of the present invention, the nucleoside of the second aspect of the present invention The acid sequence, the recombinant expression vector of the third aspect of the invention or the recombinant cell of the fourth aspect of the invention for improving cold tolerance and/or early resistance of the plant and for use in plant breeding; preferably, said The plant is tobacco.
附图说明 图 1是 GhCBFl的植物表达载体 (rd29A-GhCBFl-2300)的构建流程。  Brief Description of the Drawings Fig. 1 is a construction flow of a plant expression vector (rd29A-GhCBF1-2300) of GhCBF1.
图 2是 GhCBFl的植物表达载体 (rd29A-GhCBFl-2300)的质粒图。  Figure 2 is a plasmid map of the plant expression vector (rd29A-GhCBF1-2300) of GhCBF1.
图 3是转基因烟草抗寒性的实验结果。 图左为转基因植株(TJ1-3); 图右为非转基因 植株 (对照)。  Figure 3 shows the experimental results of cold resistance of transgenic tobacco. The left side of the figure is the transgenic plant (TJ1-3); the right side is the non-transgenic plant (control).
图 4是转基因烟草抗旱性的实验结果。 图左为转基因植株 (TJ4-15); 图右为非转基 因植株 (对照)。 具体实施方式 实施例 下面结合非限制性实施例对本发明进行进一步说明。  Figure 4 shows the experimental results of drought resistance of transgenic tobacco. The left side of the figure is the transgenic plants (TJ4-15); the right side is the non-transgenic plants (control). BEST MODE FOR CARRYING OUT THE INVENTION The present invention will be further illustrated by the following non-limiting examples.
下面实施例中提到的限制性内切酶均购自 New England Biolabs公司 实施例 1 冷胁迫下棉花 SSH文库构建:  The restriction enzymes mentioned in the examples below were all purchased from New England Biolabs. Example 1 Cotton SSH library construction under cold stress:
具体方法为:  The specific method is:
利用 Clontech公司的 PCR-selectTM cDNA Subtraction Kit, 按照产品说明书所示的方 法通过抑制消减杂交方法构建消减文库。在实验过程中以低温处理 6h的棉花幼苗叶片的 mRNA作为样本 (tester), 以未处理的棉花幼苗叶片的 mRNA作为对照 (drivei^ Using Clontech's PCR-select TM cDNA Subtraction Kit, according to the method shown subtractive library constructed by the product specification suppression subtractive hybridization method. The mRNA of cotton seedling leaves treated with low temperature for 6 h was used as a tester during the experiment, and the mRNA of untreated cotton seedling leaves was used as a control (drivei^
(1) 供试材料- 冀棉 14 (国家棉花中期库, 获取单位中国棉花研究所, 统一编号: ZM-30270)播种 到灭过菌的蛭石上,在 25°C、光周期 16h/8h条件下培养,每周浇 1/2MS培养基(9.39 mM KN03, 0.625 mM KH2P04, 10.3 mM NH4N03, 0.75 mM MgS04, 1.5mMCaCl2, 50 μ M KI, lOOu MH3BO3, 100uMMnSO4, 30uMZnSO4, 1 u MNa2Mo04, 0.1 u M CoCl2, 100 MNa2EDTA, 100 MFeSO4) 一次。 当苗株高达 25-30cm时用于实验。 (1) Test materials - 冀 cotton 14 (National Cotton Medium Term Bank, obtained by the China Cotton Research Institute, Uniform No.: ZM-30270) sown on sterilized vermiculite at 25 ° C, photoperiod 16 h / 8 h conditions Under the culture, 1/2 MS medium (9.39 mM KN0 3 , 0.625 mM KH 2 P0 4 , 10.3 mM NH 4 N0 3 , 0.75 mM MgS0 4 , 1.5 mM CaCl 2 , 50 μ M KI, lOOu MH3BO3, 100 uMMnSO 4 per week) , 30 uM ZnSO 4 , 1 u MNa 2 Mo0 4 , 0.1 u M CoCl 2 , 100 MNa 2 EDTA, 100 MFeSO 4 ) once. It was used for experiments when the seedlings were as high as 25-30 cm.
(2) 材料处理:  (2) Material handling:
将供试幼苗分为 2组, 每组 4盆, 每盆 1株。 第一组为对照组, 在 25°C、光照培养, 第二组为低温处理组, 在 4°C低温中处理 6h, 光照培养。 处理完毕后及时剪取两组幼苗 顶端 1/3的叶片, 用液氮迅速冷冻后, 于 -70°C冰箱中保存。 The test seedlings were divided into 2 groups, 4 pots per group and 1 pot per pot. The first group was the control group, cultured at 25 ° C, light. The second group was a low temperature treatment group, which was treated at 4 ° C for 6 hours at low temperature and cultured in light. After the treatment, the leaves of the top 1/3 of the seedlings of the two groups were cut out in time, quickly frozen with liquid nitrogen, and stored in a -70 °C refrigerator.
(3 ) 总 RNA提取:  (3) Total RNA extraction:
分别取对照和低温处理的棉花叶子 0.5g,用植物 RNA提取试剂盒(invitrogen)提取 棉花的总 RNA。 用 HITACHI公司的紫外分光光度计 U-2001测定总 RNA在 260nm和 280nm的吸光度值, OD260/OD280比值为 1.8-2.0, 表明总 RNA纯度较高, 用 1.0%的琼 脂糖凝胶电泳检测总 RNA的完整性, 28S条带的亮度约为 18S条带的 2倍, 表明 RNA 的完整性良好。 使用 Qiagen公司的 Oligotex mR A纯化试剂盒 (purification of polyA+ RNA from total RNA)分离 mRNA。  0.5 g of control and low temperature treated cotton leaves were taken, and total RNA of cotton was extracted using a plant RNA extraction kit (invitrogen). The absorbance of total RNA at 260 nm and 280 nm was measured by HITACHI's UV spectrophotometer U-2001. The OD260/OD280 ratio was 1.8-2.0, indicating that the total RNA purity was high. Total RNA was detected by 1.0% agarose gel electrophoresis. The integrity of the 28S strip is about twice that of the 18S strip, indicating good RNA integrity. mRNA was isolated using Qiagen's Oligotex mR A purification kit (purification of polyA+ RNA from total RNA).
(4) 抑制消减杂交:  (4) Inhibition subtractive hybridization:
为了增加获得 ESTXunigene)的有效性, 避免基因无酶切位点及所获得序列在非翻译 区, 本实验室使用 Clontech公司的 PCR-selectTM cDNA Subtraction Kit, 按照商品说明书 用 Rsal, Haelll分别对来自上述分离 mRNA的双链 cDNA进行消化, 做两组抑制消减杂 交, 其他步骤及方法严格按 Clontech公司的 PCR-select™ cDNA Subtraction Kit产品说明 书所示的方法进行抑制消减杂交, 最后合并两组正向消减杂交 cDNA片段的第二次 PCR 产物。  In order to increase the availability of ESTXunigene, to avoid gene-free cleavage sites and to obtain sequences in untranslated regions, our laboratory uses Clontech's PCR-selectTM cDNA Subtraction Kit, according to the manufacturer's instructions, using Rsal, Haelll, respectively. The double-stranded cDNA of the isolated mRNA was digested, and two sets of suppression subtractive hybridization were performed. The other steps and methods were carried out in strict accordance with the method shown in Clontech's PCR-selectTM cDNA Subtraction Kit product specification, and the two groups were combined with positive subtraction. The second PCR product of the hybrid cDNA fragment.
( 5 ) cDNA消减文库的构建与初步筛选、 克隆、 鉴定  (5) Construction and preliminary screening, cloning and identification of cDNA subtractive library
合并的正向消减杂交 cDNA片段的第二次 PCR产物 (QIAquick PCR Purification Kit 纯化, 购自 Qiagen) 与 pGEM-T Easy载体 (购自 Promega)连接, 依照 pGEM-T Easy试剂 盒产品说明书所示的方法,具体步骤如下:用 200ul PCR管依次加入下列成分:纯化 cDNA 片段的第二次 PCR产物 3ul, T4连接酶缓冲液 5 ul, pGEM-T Easy载体 l ul, T4 DNA连 接酶 lul, 于 4°C连接过夜。 取 ΙΟμΙ^连接反应产物, 加入到 ΙΟΟμί 感受态大肠杆菌 JM109(购自 TAKARA)中, 冰浴 30min、 热休克 60s、 冰浴 2min, 另加 250 μL LB培养液 ( 1% Tryptone购自 OXOID, 0.5% Yeast Extract购自 OXOID, 1% NaCl购自国药)置 37 °C摇床中, 225 r/min摇菌 30min,取 200 μΐ^菌液种植于含 50 ug/mL氨 青霉素、 40 ug/mL X-gal、 24 ug/mL IPTG (X-gal/IPTG购自 TAKARA) 的 LB (同上) 固体培养平板上, 37 °C培育 18 h。计数培养板中直径〉 1 mm的清晰白色及蓝色菌落数, 随机挑取 200个白色 菌落 (编号: Gh-C001至 Gh-C200)于含有 50 ug/mL氨苄青霉素的 LB 液体培养基的 96 孔 细胞培养板 (CORNING)中, 37°C培养过夜后加甘油至终浓度 20%, 于 - 80°C保存备用。以 巢式 PCR引物 Primer 1 (PCR-select™ cDNA Subtraction Kit试剂盒自带) 禾 Π Primer 2R (PCR-select™ cDNA Subtraction Kit试剂盒自带)进行菌液 PCR扩增, 得到 152个阳性 克隆, 对所有阳性克隆在送英潍捷基 (上海) 贸易有限公司测序。 The second PCR product of the combined forward subtractive hybridization cDNA fragment (QIAquick PCR Purification Kit purified from Qiagen) was ligated with pGEM-T Easy vector (purchased from Promega) according to the pGEM-T Easy kit product specification. The specific steps are as follows: the following components are sequentially added by using a 200 ul PCR tube: the second PCR product of the purified cDNA fragment is 3 ul, the T4 ligase buffer is 5 ul, the pGEM-T Easy vector is ul, the T4 DNA ligase is lul, at 4 °C overnight. The reaction product was ligated to ΙΟΟμί competent Escherichia coli JM109 (purchased from TAKARA), ice bath for 30 min, heat shock for 60 s, ice bath for 2 min, and 250 μL LB medium (1% Tryptone was purchased from OXOID, 0.5). % Yeast Extract was purchased from OXOID, 1% NaCl was purchased from Sinopharm. It was placed in a 37 °C shaker, 225 r/min was shaken for 30 min, and 200 μM solution was added to 50 μg/mL ampicillin, 40 ug/mL. X-gal, 24 ug/mL IPTG (X-gal/IPTG was purchased from TAKARA) on LB (ibid.) solid culture plates, incubated at 37 °C for 18 h. Count the number of clear white and blue colonies with a diameter > 1 mm in the culture plate, and randomly pick 200 white colonies (number: Gh-C001 to Gh-C200) in 96 LB liquid medium containing 50 ug/mL ampicillin. In a well cell culture plate (CORNING), incubated at 37 ° C overnight, glycerol was added to a final concentration of 20%, and stored at -80 ° C for later use. Nested PCR primer Primer 1 (PCR-selectTM cDNA Subtraction Kit kit) and Primer 2R (PCR-selectTM cDNA Subtraction Kit kit) were used for PCR amplification of PBS. Cloning, sequencing of all positive clones sent to Yingjie Jieji (Shanghai) Trading Co., Ltd.
( 6 ) 差异克隆的 cDNA测序分析:  (6) cDNA sequencing analysis of differential clones:
将 DNA测序结果去除载体和不明确序列及多余的 cDNA后, 共得到 112 个 EST(unigene;)。 经 BlastN发现其中 52条 unigene在 GenBank 中有同源序列 (相似 50% 以上), 25条 EST功能未知或者为假定蛋白, 另有 35条未获得同源匹配, 推测可能是处 于 3 '、 5 ' 末端非翻译区的较短序列。 实施例 2 GhCBFl编码基因的克隆  After the DNA sequencing results were removed from the vector and the ambiguous sequence and the excess cDNA, 112 ESTs (unigene;) were obtained. BlastN found that 52 unigenes have homologous sequences in GenBank (similar to more than 50%), 25 ESTs are unknown or hypothetical proteins, and 35 have not obtained homologous matches, presumably at 3 ', 5 ' A shorter sequence of terminal untranslated regions. Example 2 Cloning of the gene encoding GhCBF1
在实施例 1有同源序列的 unigene中, 克隆子 Gh-C021序列如 SEQ ID NO: 3所示:  In the unigene having the homologous sequence of Example 1, the clone Gh-C021 sequence is as shown in SEQ ID NO: 3:
序列分析表明该序列的编码的氨基酸序列属于 DREB1类蛋白,本文将该蛋白命名为 GhCBFl。 Sequence analysis indicated that the encoded amino acid sequence of the sequence belongs to the DREB1 class protein, and the protein was named GhCBF1.
( 1 ) GhCBFl的全长基因的克隆  (1) Cloning of the full-length gene of GhCBF1
根据已经获得的 GhCBF l的基因片段, 设计两条特异性引物, 作为 3 ' RACE的 5 ' 端特异性引物:  Based on the gene fragment of GhCBF 1 that has been obtained, two specific primers were designed as the 5 ' end specific primer of 3 ' RACE:
GhCBFl GSP1 : SEQ ID NO: 4:  GhCBFl GSP1 : SEQ ID NO: 4:
CCTACACCTGAAATGGCTGCACGA  CCTACACCTGAAATGGCTGCACGA
GhCBFl GSP2: SEQ ID NO: 5:  GhCBFl GSP2: SEQ ID NO: 5:
CGAGCACATGATGTTGCTGCA  CGAGCACATGATGTTGCTGCA
实验步骤按试剂盒说明书操作 ( 3 ' RACE System for Rapid Amplification of cDNA Ends试剂盒, 购自 invitrogen公司)  The experimental procedure was carried out according to the kit instructions ( 3 ' RACE System for Rapid Amplification of cDNA Ends kit, purchased from invitrogen)
用 SEQ ID NO: 4与 3 '端引物 AUAP (试剂盒自带), 以 mRNA逆转录的 cDNA为模 板进行第一轮 PCR扩增。 具体歩骤如下: Ex Taq购自 TAKARA, 50 μ1 ΡΟ 反应体系: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5mM的 dNTP, 2.0 μΐ mRNA反转录的 cDNA, 1.0 μΐ Ex Taq、 10 μΜ的引物 SEQ ID NO: 4和 AUAP各 2.0μ1,以及 35 μΐ的双蒸水。 PCR反应条件: 94 °C 预变性 5 min; 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 lmin, 33个循环; 72°C 延 伸 10 min。 The first round of PCR amplification was carried out using SEQ ID NO: 4 and the 3' primer AUAP (provided with the kit), using mRNA reverse transcribed cDNA as a template. The specific steps are as follows: Ex Taq purchased from TAKARA, 50 μ1 ΡΟ Reaction system: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5 mM dNTP, 2.0 μΐ mRNA reverse transcribed cDNA, 1.0 μΐ Ex Taq, 10 μΜ primer SEQ ID NO : 4 and AUAP each 2.0μ1, and 35 μΐ double distilled water. PCR reaction conditions: 94 °C Pre-denaturation for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min.
所得的 PCR产物用双馏水稀释 100倍后取 2.0μ1作为模板, 用 SEQ ID NO: 5与 3, 端引物 AUAP进行第二轮 PCR扩增, 具体步骤如下: 50 μΙ ΡΟΙ反应体系: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5mM的 dNTP, 2.0 μΐ第一轮稀释的 PCR产物, 1.0 μΐ Ex Taq、 10 μΜ的引 物 SEQ ID NO: 5和 AUAP各 2.0μ1, 以及 35 μΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min; 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 lmin, 33个循环; 72°C 延伸 10 min。 第二次 PCR产物(QIAquick PCR Purification Kit纯化,购自 Qiagen) 3ul连接于 pGEM-T Easy Vector, 转化到大肠杆菌 JM109(具体方法同上), 随机挑取 10个白色菌落于含有 50 ug/mL氨苄青霉素的 LB 液体培养基中培养, 37°C培养过夜后加甘油至终浓度 20%, -80°C 保存备用。 SEQ ID NO: 5与 3'端引物 AUAP进行菌液 PCR扩增(体系及条件同上), 得 到 5个阳性克隆, 送英潍捷基 (上海) 贸易有限公司测序,获得该基因的 cDNA的 3'端。  The obtained PCR product was diluted 100-fold with double-distilled water, and 2.0 μl was used as a template, and the second round of PCR amplification was carried out using SEQ ID NO: 5 and 3, the terminal primer AUAP, and the specific steps were as follows: 50 μΙ ΡΟΙ Reaction system: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5 mM dNTP, 2.0 μΐ first round of diluted PCR product, 1.0 μΐ Ex Taq, 10 μΜ primers SEQ ID NO: 5 and AUAP each 2.0 μl, and 35 μΐ double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min. The second PCR product (QIAquick PCR Purification Kit purified from Qiagen) was ligated to pGEM-T Easy Vector, transformed into E. coli JM109 (specifically the same as above), and 10 white colonies were randomly picked up to contain 50 ug/mL ampicillin. The penicillin was cultured in LB liquid medium, cultured at 37 ° C overnight, and then glycerin was added to a final concentration of 20%, and stored at -80 ° C until use. SEQ ID NO: 5 and 3' primer AUAP were used for PCR amplification (system and conditions are the same as above), and 5 positive clones were obtained, which were sent to Yingji Jieji (Shanghai) Trading Co., Ltd. for sequencing, and 3 of the cDNA of the gene was obtained. 'end.
根据已经获得的 GhCBFl的基因片段, 设计三条特异性引物, 分别作为 mRNA的反 转录引物 (SEQIDNO: 6) 和 5' RACE的 3' 端特异性引物 (SEQIDNO: 7和 8)。  Based on the gene fragment of GhCBF1 that has been obtained, three specific primers were designed as mRNA reverse transcription primers (SEQ ID NO: 6) and 5' RACE 3' terminal specific primers (SEQ ID NOS: 7 and 8).
GhCBFl GSP3: SEQID O: 6:  GhCBFl GSP3: SEQID O: 6:
GTTAACCTCGACGCCACTCG A  GTTAACCTCGACGCCACTCG A
GhCBFl GSP4: SEQID O: 7:  GhCBFl GSP4: SEQID O: 7:
CTTTTACCTCTAAACGCTAA TG  CTTTTACCTCTAAACGCTAA TG
GhCBFl GSP5: SEQID O: 8:  GhCBFl GSP5: SEQID O: 8:
TGCAGCAACATCATGTGCTC GTG  TGCAGCAACATCATGTGCTC GTG
实验步骤按试剂盒说明书操作 (5' RACE System for Rapid Amplification of cDNA Ends试剂盒,购自 invitrogen公司)。 SEQ ID NO: 6作为 mRNA反转录成 cDNA的引物。  The experimental procedure was performed according to the kit instructions (5' RACE System for Rapid Amplification of cDNA Ends kit, purchased from Invitrogen). SEQ ID NO: 6 is a primer that is reverse transcribed into cDNA into mRNA.
用 SEQIDNO: 7与 5'通用引物 AAP (试剂盒自带), 以 mRNA逆转录的 cDNA (反 转录引物 SEQ ID NO: 6) 为模板进行第一轮 PCR扩增, 具体步骤如下: Ex Taq购自 TAKARA, 50 μΐ PC 反应体系: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5mM的 dNTP, 2.0 μΐ总 RNA 反转录的 cDNA, 1.0
Figure imgf000007_0001
10 μΜ的引物 SEQ ID NO: 7和 AAP各 2.0μ1, 以及 35 μΐ 的双蒸水。 PCR反应条件: 94°C预变性 5 min; 94 Ό 变性 30 s, 55°C退火 30 s, 72 °C 延 伸 lmin, 33个循环; 72 "C 延伸 10 min。
The first round of PCR amplification was carried out using SEQ ID NO: 7 and 5' universal primer AAP (provided with the kit), and cDNA reverse transcription cDNA (reverse transcription primer SEQ ID NO: 6) was used as a template. The specific steps are as follows: Ex Taq Purchased from TAKARA, 50 μΐ PC Reaction system: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5 mM dNTP, 2.0 μΐ total RNA reverse transcribed cDNA, 1.0
Figure imgf000007_0001
10 μΜ of the primers SEQ ID NO: 7 and AAP each 2.0 μl, and 35 μΐ of double distilled water. PCR reaction conditions: predenaturation at 94 °C for 5 min; 94 变性 denaturation for 30 s, annealing at 55 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; 72 "C extension for 10 min.
所得的 PCR产物用双蒸水稀释 100倍后取 2.0 μΐ作为模板, 用 SEQ ID NO: 8与 3' 端引物 AUAP进行第二轮 PCR扩增, 具体步骤如下: 50 l PCR反应体系: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5mM的 dNTP, 2.0 μΐ第一轮稀释的 PCR产物, 1.0 μΐ Ex Taq、 10 μΜ的引 物 SEQ ID NO: 8和 AUAP各 2.0μ1, 以及 35 μΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min; 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 lmin, 33个循环; 72°C 延伸 10 min。 第二次 PCR产物(QIAquick PCR Purification Kit纯化,购自 Qiagen) 3ul连接于 pGEM-T Easy Vector, 转化到 JM109(具体方法同上),随机挑取 10个白色菌落于含有 50 ug/mL氨 苄青霉素的 LB 液体培养基中培养, 37°C培养过夜后加甘油至终浓度 20%, -80°C保存备 用。 SEQ ID NO: 8与3'端引物AUAP进行菌液PCR扩增 (反应体系及反应条件同上) , 得到 4个阳性克隆,送广州英潍捷基(上海) 贸易有限公司测序, 获得该基因的 cDNA的 5'端。 The obtained PCR product was diluted 100-fold with double distilled water, and then 2.0 μL was used as a template. The second round of PCR amplification was carried out with SEQ ID NO: 8 and the 3' primer AUAP. The specific steps were as follows: 50 l PCR reaction system: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5 mM dNTP, 2.0 μΐ first round of diluted PCR product, 1.0 μΐ Ex Taq, 10 μΜ SEQ ID NO: 8 and AUAP were each 2.0 μl, and 35 μΐ of double distilled water. PCR reaction conditions: predenaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min. The second PCR product (QIAquick PCR Purification Kit purified from Qiagen) was ligated to pGEM-T Easy Vector, transformed into JM109 (specific method as above), and 10 white colonies were randomly picked up to contain 50 ug/mL ampicillin. Incubate in LB liquid medium, incubate at 37 °C overnight, add glycerol to a final concentration of 20%, and store at -80 °C until use. SEQ ID NO: 8 and the 3' primer AUAP were used for PCR amplification (reaction system and reaction conditions as above), and 4 positive clones were obtained and sent to Guangzhou Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing. The 5' end of the cDNA.
所得的 5 ' RACE产物克隆测序后, 与 3 ' RACE产物测序结果拼接。 获得 GhCBFl 的全长 cDNA序列。 根据 GhCBFl的全长 cDNA序列设计一对引物如下:  The obtained 5 ' RACE product was cloned and sequenced, and spliced with the 3 ' RACE product sequencing result. The full-length cDNA sequence of GhCBF1 was obtained. A pair of primers were designed based on the full-length cDNA sequence of GhCBF1 as follows:
G CBFlF: SEQ ID NO: 9:  G CBFlF: SEQ ID NO: 9:
ATGGCGGCAGAAACGGCGGAGACACC  ATGGCGGCAGAAACGGCGGAGACACC
GhCBFIR: SEQ ID NO: 10:  GhCBFIR: SEQ ID NO: 10:
TCAGTAACTCCACAAGGAAACA  TCAGTAACTCCACAAGGAAACA
通过 SEQ ID NO: 9禾 B SEQ ID NO: 10来克隆 GhCBFl编码基因的全长。  The full length of the GhCBF1 encoding gene was cloned by SEQ ID NO: 9 and B SEQ ID NO: 10.
采用 TaKaRa的 PrimeSTAR HS DNA聚合酶,以棉花的 cDNA为模板进行 PCR反应。 50 l PCR反应体系: 10 1 5 X PS Buffer, 3 μ 1 2.5mM的續 P, 2.0 1 cDNA, Ι.Ο μ 1 PrimeSTAR, 10 μ M的引物 SEQ ID NO: 9禾卩 SEQ ID NO: 10各 2.0 μ 1, 30 μ ΐ的双蒸水。 PCR反应条件: 94°C预变性 5min; 94 °C 变性 30s, 58°C退火 30s, 72 °C 延伸 60s, 33 个循环; 72 °C 延伸 10min。  PCR was performed using TaKaRa's PrimeSTAR HS DNA polymerase and cotton cDNA as a template. 50 l PCR reaction system: 10 1 5 X PS Buffer, 3 μ 1 2.5 mM continuous P, 2.0 1 cDNA, Ι.Ο μ 1 PrimeSTAR, 10 μM primer SEQ ID NO: 9 and SEQ ID NO: 10 2.0 μl, 30 μΐ each of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 60 s, 33 cycles; extension at 72 °C for 10 min.
PCR扩增产物加 A: PCR产物加 2.5倍的无水乙醇, -20°C放置 10分钟, 离心, 去 上清, 晾干,用 21 μ 1双蒸水溶解。加入 2.5ul 10 X Ex Buffer, 0.5ul 5 mM的 dATP , 2.5ul lO X Ex Taq。 反应条件: 70°C反应 30分钟。 将得到约 600bp的 DNA片段回收 (Omega 回收试剂盒), 克隆至 pGEM T-easy载体上, 转化 JM109C方法同上)。 随机挑取 10个白 色菌落于含有 50 ug/mL氨苄青霉素的 LB 液体培养基中培养, 37°C培养过夜后加甘油至 终浓度 20%, -80°C保存备用。 SEQ ID NO: 9与 SEQ ID NO: 10进行菌液 PCR扩增 (反 应体系及反应条件同上), 得到 4个阳性克隆, 送英潍捷基 (上海) 贸易有限公司测序, 序列为 SEQ ID NO: 2。 其蛋白表达序列为 SEQ ID NO: 1。 GhCBFl的氨基酸序列: SEQ ID NO: 1 1 MAAETAETPS SSSEEVYSLA The PCR amplification product was added with A: PCR product plus 2.5 times absolute ethanol, placed at -20 ° C for 10 minutes, centrifuged, de-cleared, air-dried, and dissolved in 21 μl of double distilled water. Add 2.5 ul 10 X Ex Buffer, 0.5 ul 5 mM dATP, 2.5 ul lO X Ex Taq. Reaction conditions: The reaction was carried out at 70 ° C for 30 minutes. A DNA fragment of about 600 bp was recovered (Omega recovery kit), cloned into pGEM T-easy vector, and transformed into JM109C method as above). Ten white colonies were randomly picked and cultured in LB liquid medium containing 50 ug/mL ampicillin. After incubation at 37 ° C overnight, glycerol was added to a final concentration of 20%, and stored at -80 ° C until use. SEQ ID NO: 9 and SEQ ID NO: 10 were used for bacterial liquid PCR amplification (reaction system and reaction conditions are the same as above), and 4 positive clones were obtained, which were sent to Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing, and the sequence was SEQ ID NO. : 2. Its protein expression sequence is SEQ ID NO: 1. Amino acid sequence of GhCBF1: SEQ ID NO: 1 1 MAAETAETPS SSSEEVYSLA
21 TSKPKKRAGR RIFKETRRPI  21 TSKPKKRAGR RIFKETRRPI
41 FRGVRQRKV KWVCELREPN  41 FRGVRQRKV KWVCELREPN
61 KKTRIWLGTY PTPEMAARAH  61 KKTRIWLGTY PTPEMAARAH
81 DVAALAFRGK SACLNFADSA  81 DVAALAFRGK SACLNFADSA
101 WKLPLPASMD AIDIRRAAVE  101 WKLPLPASMD AIDIRRAAVE
121 AAEAFRPKES EEPLGGGGTR  121 AAEAFRPKES EEPLGGGGTR
141 QGSVEACSSG VEVNFVDEEA  141 QGSVEACSSG VEVNFVDEEA
161 MFDMPNLLAS MAEGLLLSPP  161 MFDMPNLLAS MAEGLLLSPP
181 RST RDDDDD DSDIDVSLWS  181 RST RDDDDD DSDIDVSLWS
201  201
GhCBFl编码基因的核苷酸序列: SEQ ID NO: 2 Nucleotide sequence of the GhCBF1 encoding gene: SEQ ID NO: 2
Figure imgf000009_0001
实施例 3 GhCBFl植物表达载体构建
Figure imgf000009_0001
Example 3 Construction of GhCBF1 Plant Expression Vector
植物表达载体 rd29A- GhCBFl -2300构建流程如附图 1所示。  The plant expression vector rd29A-GhCBFl-2300 was constructed as shown in Figure 1.
选择植物双元表达载体 pCAMBIA2300 (购自北京鼎国昌盛生物技术有限责任公司) 作为植物表达载体, 用 Pnos启动子替换 PTII基因含双增强子的 35S启动子, 以降低 ΡΤΠ蛋白在植物中的表达。选择诱导型启动子 rd29A及 Tnos作为 GhCBFl基因的启动 子和终止子。 具体步骤如下: The plant binary expression vector pCAMBIA2300 (purchased from Beijing Dingguo Changsheng Biotechnology Co., Ltd.) was selected as a plant expression vector, and the Pnos promoter was used to replace the 35S promoter of the PTII gene containing the double enhancer to reduce the expression of prion protein in plants. . Inducible promoter rd29A and Tnos were selected as promoters of GhCBF1 gene Sub and terminator. Specific steps are as follows:
使用 SEQ ID NO: 11和 SEQ ID NO: 12以植物表达载体 PBI121 (购自北京华夏远洋 科技有限公司)为模板扩增 Pnos,采用 TaKaRa的 PrimeSTAR HS DNA聚合酶。 50 μΐ PCR 反应体系: 10 μΐ 5 xPS Buffer, 3 μΐ 2.5mM的 dNTP, 1.0 μ1 ΡΒΙ121 , 1.0 μΐ PrimeSTAR, 10 μΜ的引物 SEQ ID NO: 11和 SEQ ID NO: 12各 2.0μ1, 以及 31 μΐ的双蒸水。 PCR反应 条件: 94°C预变性 5 min; 94 °C 变性 30 s, 56°C退火 30 s, 72V 延伸 30 s, 33个循环; 72 °C 延伸 10 min, 产物通过 EcoRI、 Bglll酶切连接到 pCAMBIA2300 (promega T4连接 酶盒)获得 pCAMBIA2300-l。  Pnos was amplified using the plant expression vector PBI121 (purchased from Beijing Huaxia Ocean Technology Co., Ltd.) using SEQ ID NO: 11 and SEQ ID NO: 12, using TaKaRa's PrimeSTAR HS DNA polymerase. 50 μΐ PCR reaction system: 10 μΐ 5 xPS Buffer, 3 μΐ 2.5 mM dNTP, 1.0 μ1 ΡΒΙ121, 1.0 μΐ PrimeSTAR, 10 μΜ primers SEQ ID NO: 11 and SEQ ID NO: 12 each 2.0 μl, and 31 μΐ Double distilled water. PCR reaction conditions: predenaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 56 °C for 30 s, extension at 72V for 30 s, 33 cycles; extension at 72 °C for 10 min, product ligated by EcoRI, Bglll pCAMBIA2300-1 was obtained by pCAMBIA2300 (promega T4 ligase cassette).
SEQ ID NO: 11 :  SEQ ID NO: 11:
GCAC GAATTC ATACAAATGGACGAACGGAT GCAC GAATTC ATACAAATGGACGAACGGAT
SEQ ID NO: 12: SEQ ID NO: 12:
ATCC AGATCT AGATCCGGTGCAGATTATTTG  ATCC AGATCT AGATCCGGTGCAGATTATTTG
使用 SEQ ID NO: 13和 SEQ ID NO : 14以 PBI121为模板扩增 Tnos, 采用 TaKaRa 的 PrimeSTAR HS DNA聚合酶。 50 μΐ PCR反应体系: 10 μΐ 5 xPS Buffer, 3 μΐ 2.5mM的 dNTP, 1.0 μ1 ΡΒΙ121 , 1 0 μΐ Prime STAR、 10 μΜ的引物 SEQ ID NO: 13和 SEQ ID NO: 14 各 2.0μ1, 以及 31 μΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min; 94V 变性 30 s, 58°C 退火 30 s, 72 °C 延伸 30 s, 33个循环; 72°C 延伸 10 min。 产物通过 Sacl、 EcoRI酶切 连接到 pCAMBIA2300-l, 获得 pCAMBIA2300-2。  Tnos was amplified using SEQ ID NO: 13 and SEQ ID NO: 14 with PBI121 as a template, using TaKaRa's PrimeSTAR HS DNA polymerase. 50 μΐ PCR reaction system: 10 μΐ 5 xPS Buffer, 3 μΐ 2.5 mM dNTP, 1.0 μ1 ΡΒΙ121, 1 0 μΐ Prime STAR, 10 μΜ primers SEQ ID NO: 13 and SEQ ID NO: 14 each 2.0 μ1, and 31 ΐ ΐ double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min; denaturation at 94 V for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 30 s, 33 cycles; extension at 72 °C for 10 min. The product was cleaved by Sacl, EcoRI and ligated into pCAMBIA2300-1 to obtain pCAMBIA2300-2.
SEQ ID O: 13:  SEQ ID O: 13:
AAGGAGCTCGAATTTCCCCGATCGTTCAAA SEQ ID O: 14:  AAGGAGCTCGAATTTCCCCGATCGTTCAAA SEQ ID O: 14:
TCAGAATTC CCAGTGAATT CCCGATCTAG TA  TCAGAATTC CCAGTGAATT CCCGATCTAG TA
使用 SEQ ID NO : 15 禾 B SEQ ID NO : 16 以拟南芥 (哥伦比亚型 , 购自 www.arabidopsis.org)基因组 DNA为模板扩增拟南芥 rd29A启动子 (参考 Zeng J., et L 2002, Preparation of total DNA from"recalcit rant plant taxa", Acta Bot. Sin., 44(6): 694-697 中的方法提取拟南芥 DNA)。 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶。 50 μΐ PCR反 应体系: 10 μΐ 5xPS Buffer, 3 μΐ 2.5mM的 dNTP, 1.0 μΐ拟南芥 DNA, 1.0 μΐ PrimeSTAR 10 μΜ的引物 SEQ ID NO: 15和 SEQ ID NO: 16各 2.0μ1, 以及 31 μΐ的双蒸水。 PCR反 应条件: 94°C预变性 5 min; 94 °C 变性 30 s, 58°C退火 30 s, 72V 延伸 30 s, 33个循 环; 72°C 延伸 10 min, PCR产物通过 HindIII、 Sail酶切连接到 pCAMBIA2300-2, 获得 pCAMBIA2300-3。 SEQ ID NO: 15: Amplification of the Arabidopsis thaliana rd29A promoter using SEQ ID NO: 15 and SEQ ID NO: 16 using Arabidopsis thaliana (Columbia type, available from www.arabidopsis.org) genomic DNA (see Zeng J., et L 2002) , Preparation of total DNA from "recalcit rant plant taxa", Acta Bot. Sin., 44(6): Method 694-697 for extracting Arabidopsis DNA). PrimeSTAR HS DNA polymerase using TaKaRa. 50 μΐ PCR reaction system: 10 μΐ 5×PS Buffer, 3 μΐ 2.5 mM dNTP, 1.0 μΐ Arabidopsis DNA, 1.0 μΐ PrimeSTAR 10 μΜ primers SEQ ID NO: 15 and SEQ ID NO: 16 each 2.0 μl, and 31 μΐ Double steamed water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72V for 30 s, 33 cycles; extension at 72 °C for 10 min, PCR products were digested by HindIII, Sail Connect to pCAMBIA2300-2 to obtain pCAMBIA2300-3. SEQ ID NO: 15:
ACTAAGCTTCCTTCTTGACATCATTCAATTTTA SEQ ID NO: 16:  ACTAAGCTTCCTTCTTGACATCATTCAATTTTA SEQ ID NO: 16:
TGAGTCGACTCCAAAGATT TTTTTCTTTC CAATAG  TGAGTCGACTCCAAAGATT TTTTTCTTTC CAATAG
使用 SEQ ID NO: 17和 SEQ ID NO: 18扩增 GhCBFl基因 (模板是实施例 1所获 得含有 GhCBFl基因的 pGEM T-easy重组载体), 采用 TaKaRa的 PrimeSTAR HS DNA 聚合酶。 50 μΐ PCR 反应体系: 10 μΐ 5xPS Buffer , 3 μΐ 2.5mM 的 dNTP, 1.0 μΐ GhCBFl -pGEM, 1.0 μΐ PrimeSTAR, 10 μΜ的引物 SEQ ID NO: 17禾 Π SEQ ID NO: 18各 2.0μ1, 以及 31 μΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min; 94 °C 变性 30 s, 58°C 退火 30 s, 72 °C 延伸 lmin, 33个循环; 72°C 延伸 10 min。 通过 Sall、 Sacl酶切连接到 pCAMBIA2300-3 , 获得植物表达载体, rd29A- GhCBFl-2300。  The GhCBF1 gene was amplified using SEQ ID NO: 17 and SEQ ID NO: 18 (template was the pGEM T-easy recombinant vector containing the GhCBF1 gene obtained in Example 1), and TaKaRa's PrimeSTAR HS DNA polymerase was used. 50 μΐ PCR reaction system: 10 μΐ 5×PS Buffer , 3 μΐ 2.5 mM dNTP, 1.0 μΐ GhCBF1-pGEM, 1.0 μΐ PrimeSTAR, 10 μΜ primers SEQ ID NO: 17 and SEQ ID NO: 18 each 2.0 μ1, and 31 ΐ ΐ double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min. The plant expression vector, rd29A-GhCBFl-2300, was obtained by cleavage of Sall and Sacl to pCAMBIA2300-3.
SEQ ID NO: 17:  SEQ ID NO: 17:
TGAGTCGAC ATGGCGGCAGAAACGGCGGAGACACC SEQ ID NO: 18:  TGAGTCGAC ATGGCGGCAGAAACGGCGGAGACACC SEQ ID NO: 18:
AAGGAGCTC TCAGTAACTC CACAAGGAAA CA 实施例 4 rd29A- GhCBFl -2300表达载体转化农杆菌  AAGGAGCTC TCAGTAACTC CACAAGGAAA CA Example 4 rd29A-GhCBFl-2300 Expression Vector Transformation Agrobacterium
农杆菌 LBA4404 (购自 Biovector Science Lab,Inc)感受态制备: 提前 l-2d将农杆菌 LBA4404在含 5(^g/ml利福平和 5(^g/ml链霉素的 LB固体培养基上划单斑接种, 28 °C培 养 1至 2d。 挑取单菌落接种于 5ml含 50μ§/ηι1利福平和 50μ§/ηι1链霉素的 LB液体培养 基中, 28Ό下摇动培养过夜 (约 12-16h)至 OD600值为 0.4, 形成种子菌液。取 5ml活化后 的菌液 (1 :20的比例) 接种于 100ml同样浓度抗生素的 LB液体培养基中, 28°C摇动培 养 2-2.5h至 OD600=0.8。 冰浴菌液 10min, 每隔 3min摇匀一次, 令细菌均匀进入休眠状 态。 于 4°C下 4000g离心 10min, 弃上清液; 加入一定量预冷 10%甘油重悬浮菌体, 4 °C下 4000g离心 10min, 收集沉淀; 用 10%甘油重复洗 3-4次; 加入适量冰浴预冷的 10%甘 油重新悬浮细菌沉淀, 以 40μ1/管将其分装, 于 -70°C保存备用。 Agrobacterium tumefaciens LBA4404 (purchased from Biovector Science Lab, Inc) Competent preparation: Agrobacterium LBA4404 was placed on LB solid medium containing 5 (^g/ml rifampicin and 5 (^g/ml streptomycin) 1-2d in advance. Single spotted inoculation, cultured at 28 °C for 1 to 2 days. Pick a single colony and inoculate 5 ml of LB liquid medium containing 50μ § /ηι1 rifampicin and 50μ § /ηι1 streptomycin, and shake overnight at 28 °C (about 12 -16h) to an OD600 value of 0.4, to form a seed bacterial solution. Take 5ml of activated bacterial solution (1:20 ratio) inoculated in 100ml of the same concentration of antibiotics in LB liquid medium, shake at 28 ° C for 2-2.5h To OD600=0.8. Ice bath liquid for 10min, shake once every 3min, so that the bacteria evenly enter the dormant state. Centrifuge at 4000g for 10min at 4°C, discard the supernatant; add a certain amount of pre-cooled 10% glycerol resuspended bacteria Body, centrifuged at 4000g for 10min at 4 °C for 10min, collect the precipitate; wash 3-4 times with 10% glycerol; add the appropriate amount of ice bath pre-cooled 10% glycerol to resuspend the bacterial pellet, dispense it in 40μ1/tube, at - Store at 70 ° C for later use.
转化农杆菌: 在冰上融化感受态细胞, 往 40μ1 的感受态细胞中加入 Ιμΐ 的 rd29A- GhCBF 1-2300质粒, 混匀后冰浴约 10 min。 将感受态和 DNA的混合物用枪转移到预冷 的电击杯中, 轻敲使悬浮液到达底部, 注意不要有气泡。 将电击杯 (购自 bio-rad)放到 电击室的滑道上, 推动滑道将电击杯放至电击室基座电极处。 使用 0.1cm的电击杯的时 候, MicroPulser (购自 bio-rad) 的程序设置为 "Agr", 电击一次 。 立即取出电击杯, 加 入 28 °C预热的 LB培养基。 快速而轻柔的用枪将细胞打匀。 将悬浮液转入 1.5ml的离心 管, 28 °C, 225rpm培养 lh。 取 100〜200μ1的菌液涂布与相应的抗性筛选培养基 (LB 固体培养基, 含 50μ§/ηι1利福平、 50μ§/ηι1链霉素、 50μ§/ηι1卡那霉素) 平板上, 28 °C培 养。 实施例 5 利用农杆菌介导的转化法获得转基因烟草 Transformation of Agrobacterium: The competent cells were thawed on ice, and Ιμΐ rd29A-GhCBF 1-2300 plasmid was added to 40 μl of competent cells, and the mixture was mixed and ice bathed for about 10 min. Transfer the mixture of competent and DNA to a pre-cooled electric shock cup with a gun and tap to bring the suspension to the bottom, taking care not to have air bubbles. Place the electric shock cup (purchased from bio-rad) on the slide of the electric shock chamber and push the slide to place the electric shock cup on the base electrode of the electric shock chamber. When using a 0.1cm electric shock cup, the program of the MicroPulser (purchased from bio-rad) is set to "Agr" and the electric shock is applied once. Take out the electric shock cup immediately, plus Pre-heated LB medium at 28 °C. Quickly and gently spread the cells with a gun. The suspension was transferred to a 1.5 ml centrifuge tube and incubated at 28 ° C, 225 rpm for 1 h. Take 100~200μ1 of bacterial solution coated with the corresponding resistance screening medium (LB solid medium, containing 50μ § / ηι1 rifampicin, 50μ § / ηι1 streptomycin, 50μ § / ηι1 kanamycin) plate On, culture at 28 °C. Example 5 Obtaining Transgenic Tobacco by Agrobacterium-mediated Transformation
用 75%酒精浸泡烟草种子 (国家烟草中期库, 获取单位中国农科院烟草所, 库编号 I5A00660) 30s, 再用 0.1%升汞浸泡 8min, 进行表面消毒。将消过毒的烟草种子置于 MS 固体培养基 (18.78 mM KN03, 1.25 mM KH2P04, 20.6 mM NH4NO3, 1.5 mM MgS04, 3.0 mM CaCl2, 50 μ M KI, 100 μ M H3BO3 , 100 μ M MnS04, 30 μ M ZnS04, 1 M Na2Mo04, 0.1 u M CoCl2, 100 μ M Na2EDTA, 100 u M FeSO4, 7.4 g/L琼脂,蔗糖 30g L) 上无菌发芽, 制备无菌苗。取无菌苗叶片剪成 5mm X 5mm大小的叶盘, 用处于对数生长 期的含表达载体的农杆菌浸染叶盘 10min, 吸干菌液, 在黑暗条件下共培养 2天(MS培 养基)。将叶片转到分化培养基 (MS+lmg/L BA+0.1mg/L NAA+50mg/L卡那霉素 +500mg/L 头孢霉素) 上, 光照条件下培养 45 天左右, 待芽长大后切下转移到生根培养基 (MS+50mg/L卡那霉素 +500mg/L头孢霉素) 中培养 30天左右, 待根系发达后将小苗转 入仅加有 500mg/L头孢霉素的 MS培养基上进行编号保存。 To soak the tobacco seeds with 75% alcohol (National Tobacco Medium Term Bank, obtain the Tobacco Institute of the Chinese Academy of Agricultural Sciences, library number I5A00660) for 30s, then soak for 10min with 0.1% liters of mercury for surface disinfection. The sterile tobacco seeds were placed in MS solid medium (18.78 mM KN0 3 , 1.25 mM KH 2 P0 4 , 20.6 mM NH4NO3, 1.5 mM MgS0 4 , 3.0 mM CaCl 2 , 50 μM KI, 100 μM H3BO3 , 100 μ M MnS0 4 , 30 μ M ZnS0 4 , 1 M Na 2 Mo0 4 , 0.1 u M CoCl 2 , 100 μ M Na 2 EDTA, 100 u M FeSO 4 , 7.4 g/L agar, sucrose 30 g L) The bacteria are germinated to prepare sterile seedlings. The leaves of the sterile seedlings were cut into 5 mm X 5 mm leaf discs, and the leaf discs were inoculated with Agrobacterium containing the expression vector in the logarithmic growth phase for 10 min, and the bacterial liquid was absorbed and co-cultured for 2 days in the dark (MS medium). ). The leaves were transferred to a differentiation medium (MS + 1 mg / L BA + 0.1 mg / L NAA + 50 mg / L kanamycin + 500 mg / L cephalosporin), cultured under light conditions for about 45 days, to grow buds After cutting, transfer to rooting medium (MS+50mg/L kanamycin+500mg/L cephalosporin) for about 30 days. After the root system is developed, the seedlings are transferred to only 500mg/L cephalosporin. The number was saved on the MS medium.
取获得的转基因烟草叶片,提取基因组 DNA(同实施例 3中拟南芥 DNA提取方法), 用引物 SEQ ID NO: 17和 SEQ ID NO: 18进行 PCR鉴定(50 μΐ PCR反应体系: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5mM的 dNTP, 2.0 μΐ DNA, 1.0 μΐ Ex Taq、 10 μΜ的引物 SEQ ID NO: 17 和 SEQ ID NO: 18各 2.0μ1,以及 35 μΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min; 94 °C 变性 30 s, 58 °C退火 30 s, 72 °C 延伸 lmin, 33个循环; 72°C 延伸 10 min), 保存阳性 植株, 分别编号为 T。J1至 T。J20。 选取 T。J1-T。J5的种子进行 实施例 6过表达 GhCBFl的转基因烟草 代的抗寒模拟实验及功能鉴定  The obtained transgenic tobacco leaves were extracted, and genomic DNA was extracted (the Arabidopsis thaliana DNA extraction method in Example 3), and PCR was carried out using primers SEQ ID NO: 17 and SEQ ID NO: 18 (50 μΐ PCR reaction system: 5 μΐ ΙΟχΕχ Buffer, 3 μΐ 2.5 mM dNTP, 2.0 μΐ DNA, 1.0 μΐ Ex Taq, 10 μΜ primers SEQ ID NO: 17 and SEQ ID NO: 18 each 2.0 μl, and 35 μΐ double distilled water. PCR reaction conditions: 94 Pre-denaturation at °C for 5 min; denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, 33 cycles; extension at 72 °C for 10 min), and storing positive plants, numbered T. J1 to T. J20. Select T. J1-T. Seeds of J5 were carried out. Example 6 Over-expression of GhCBF1 transgenic tobacco generation cold-resistant simulation experiment and functional identification
将灭过菌的蛭石用 1/2MS培养基浸透。 将 TQ代转基因烟草 T。J1、 TJ2、 TJ3、 TJ4和 ToJ5的种子以及野生型非转基因对照烟草种子分别播种在蛭石上, 25 Ό、 10小时光培养 /14 小时暗培养循环, 每 5天浇一次 1/2MS培养基, 培养 25天之后, 摘取最下端一片叶子, 提 取基因组 DNA (同实施例 3中拟南芥 DNA提取方法), 利用引物 SEQ ID NO: 17和 SEQ ID NO: 18做 PCR鉴定(反应及条件同上), 剔除阴性植株(对照烟草也同样摘取一片叶子)。 挑取大小一致的转基因烟草 (TJ1、 TJ2、 TYJ3、 TJ4和 TJ5各 10株, 编号分别是 TJ1-1 至 TJl-lC TJ2-1至 1^2-10、 TiJ3-lSTiJ3-10, TJ4-1至 TJ4-10和 TJ5-1至 TJ5-10)、 对 照烟草(10株)做耐寒实验。 转基因烟草、 对照烟草, 4°C胁迫 72小时。 再经过 14天恢复 培养。 然后取出植株对植株进行称重。 上述 T代转基因植株的抗寒性鉴定表明, 对照植 株不能恢复正常生长, 生长明显受到抑制, 而转基因植株生长明显高于对照植株, 显现 出明显的抗寒性(附图 3及表 1 )。在图 3中, 选取转基因植株^1-3和一株对照烟草示例性 显示, 其他烟草的结果与它们类似。 实施例 7过表达 GhCBFl的转基因烟草 ^代的抗旱模拟实验及功能鉴定 The sterilized vermiculite was soaked in 1/2 MS medium. T Q generation transgenic tobacco T. Seeds of J1, TJ2, TJ3, TJ4 and ToJ5 and wild-type non-transgenic control tobacco seeds were sown on vermiculite, 25 Ό, 10 hours light culture/14 hours dark culture cycle, and 1/2 MS medium was poured every 5 days. After culturing for 25 days, the lowest leaf was extracted, and genomic DNA was extracted (the Arabidopsis DNA extraction method in Example 3), and PCR was identified using primers SEQ ID NO: 17 and SEQ ID NO: 18 (reaction and conditions are the same as above) ), the negative plants were removed (the same leaves were taken from the control tobacco). Picking up the same size of transgenic tobacco (TJ1, TJ2, TYJ3, TJ4 and TJ5 each 10 strains, numbered TJ1-1 To TJl-lC TJ2-1 to 1^2-10, TiJ3-lSTiJ3-10, TJ4-1 to TJ4-10 and TJ5-1 to TJ5-10), control tobacco (10 strains) were subjected to cold resistance experiments. Transgenic tobacco, control tobacco, stressed at 4 ° C for 72 hours. The culture was resumed after another 14 days. The plants are then removed and the plants are weighed. The cold resistance of the above T-transgenic plants showed that the control plants could not resume normal growth, and the growth was significantly inhibited, while the transgenic plants grew significantly higher than the control plants, showing obvious cold resistance (Fig. 3 and Table 1). In Figure 3, the selection of transgenic plants ^ 1-3 and a control tobacco exemplarily showed that the results of other tobaccos were similar to them. Example 7 Drought-resistant simulation experiment and functional identification of transgenic tobacco overexpressing GhCBF1
灭过菌的蛭石用 1/2MS培养基浸透。将 T。代转基因烟草 T。J1、 TJ2、 TJ3、 T。J4和 J5 的种子以及对照烟草种子分别播种在蛭石上, 25 Ό、 10小时光培养 /14小时暗培养循环, 每 5天浇一次 1/2MS, 培养 25天之后, 摘取最下端一片叶子, 提取基因组 DNA (同实施例 3中拟南芥 DNA提取方法), 利用引物 SEQ ID NO: 17和 SEQ ID NO: 18做 PCR鉴定, 剔 除阴性植株(对照烟草也同样摘取一片叶子)。挑取大小一致的转基因烟草(TJ1、 TJ2、 TiJ3 , T!J4和 TJ5各 10株, 编号分别是 ^- 至^^。、 1^2- 11至 1^2-20、 T!D-l l至 TiJ3-20, TJ4-11至 TJ4-20和 TJ5-11至 Τ 5-20)、 对照烟草 (10株) 做耐旱实验。 转基因 烟草、 对照烟草干旱 14天 (不浇水), 25 V , 10小时光培养 /14小时暗培养循环。 然后取出 植株对植株进行称重。 上述 ^代转基因植株的抗旱性鉴定表明, 对照植株萎蔫严重, 而 转基因植株能够正常生长, 显示出明显的抗旱性 (附图 4及表 1 )。 图 4中, 选取转基因植 株 TJ4-15和一株对照烟草示例性显示, 其他烟草的结果与它们类似。  The sterilized vermiculite was soaked in 1/2 MS medium. Will T. Generation of genetically modified tobacco T. J1, TJ2, TJ3, T. Seeds of J4 and J5 and control tobacco seeds were separately sown on vermiculite, 25 Ό, 10 hours light culture/14 hours dark culture cycle, 1/2 MS was poured every 5 days, and after 25 days of culture, the lowermost leaves were taken. Genomic DNA was extracted (the Arabidopsis thaliana DNA extraction method in the same manner as in Example 3), and PCR was performed using primers SEQ ID NO: 17 and SEQ ID NO: 18, and the negative plants were knocked out (the control tobacco also extracted a leaf). Pick up the same size of transgenic tobacco (TJ1, TJ2, TiJ3, T!J4 and TJ5 each 10, numbered ^- to ^^., 1^2- 11 to 1^2-20, T!Dl l to TiJ3-20, TJ4-11 to TJ4-20 and TJ5-11 to Τ 5-20), and control tobacco (10 strains) were tested for drought tolerance. Transgenic tobacco, control tobacco drought for 14 days (without watering), 25 V, 10 hours light culture / 14 hours dark culture cycle. The plants are then removed and the plants are weighed. The drought resistance of the above-mentioned transgenic plants showed that the control plants were wilting, and the transgenic plants were able to grow normally, showing significant drought resistance (Fig. 4 and Table 1). In Figure 4, the selection of the transgenic plants TJ4-15 and a control tobacco showed that the results of other tobaccos were similar.
表 1 Table 1
Figure imgf000013_0001
Figure imgf000013_0001

Claims

权 利 要 求 书 Claim
1. 棉花的一个 DREB类转录因子, 其序列为 SEQ ID N0: 1。 1. A DREB-like transcription factor of cotton having the sequence SEQ ID NO: 1.
2. 编码权利要求 1所述的转录因子的核苷酸序列。  2. A nucleotide sequence encoding the transcription factor of claim 1.
3. 权利要求 2所述的核苷酸序列,其特征在于具有 SEQ ID NO: 2所示的核苷酸序列。 The nucleotide sequence according to claim 2, which has the nucleotide sequence shown by SEQ ID NO: 2.
4. 一种重组表达载体, 其含有权利要求 2或 3所述的核苷酸序列并且所述核苷酸序 列与所述表达载体的表达控制序列可操作地连接; 优选地, 所述载体为附图 2 所示的 rd29A-GhCBFl-2300载体。 A recombinant expression vector comprising the nucleotide sequence of claim 2 or 3 and operably linked to an expression control sequence of the expression vector; preferably, the vector is The rd29A-GhCBF1-2300 carrier shown in Figure 2 is shown.
5. —种重组细胞, 其含有权利要求 2或 3所述的核苷酸序列或者权利要求 4所述的 重组表达载体; 优选地, 所述重组细胞为重组农杆菌细胞。  A recombinant cell comprising the nucleotide sequence of claim 2 or 3 or the recombinant expression vector of claim 4; preferably, the recombinant cell is a recombinant Agrobacterium cell.
6. 一种改善植物耐寒性和 /或抗旱性的方法, 包括: 将权利要求 2或 3所述的核苷酸 序列或者权利要求 4所述的重组表达载体导入植物或植物组织并使所述基因表达; 优选 地, 所述植物是烟草。  A method for improving cold tolerance and/or drought resistance of a plant, comprising: introducing the nucleotide sequence of claim 2 or 3 or the recombinant expression vector of claim 4 into a plant or plant tissue and Gene expression; Preferably, the plant is tobacco.
7. 一种制备转基因植物的方法, 包括: 在有效产生植物的条件下培养含有权利要求 2或 3所述的核苷酸序列或者权利要求 4所述的重组表达载体的植物或植物组织。  A method for producing a transgenic plant, comprising: cultivating a plant or plant tissue comprising the nucleotide sequence of claim 2 or 3 or the recombinant expression vector of claim 4 under conditions effective to produce a plant.
8. 权利要求 7所述的方法, 其中所述植物是烟草。  8. The method of claim 7 wherein the plant is tobacco.
9. 权利要求 1的转录因子、 权利要求 2或 3所述的核苷酸序列、 权利要求 4所述的 重组表达载体或者权利要求 5所述的重组细胞用于改善植物耐寒性和 /或抗旱性以及用于 植物育种的用途。  9. The transcription factor of claim 1, the nucleotide sequence of claim 2 or 3, the recombinant expression vector of claim 4 or the recombinant cell of claim 5 for improving cold tolerance and/or drought resistance of plants Sexuality and use for plant breeding.
10. 权利要求 9所述的用途, 其中所述植物是烟草。  10. The use of claim 9, wherein the plant is tobacco.
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