WO2014026311A1 - Cotton protein kinase and encoded gene and use thereof - Google Patents

Cotton protein kinase and encoded gene and use thereof Download PDF

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WO2014026311A1
WO2014026311A1 PCT/CN2012/079997 CN2012079997W WO2014026311A1 WO 2014026311 A1 WO2014026311 A1 WO 2014026311A1 CN 2012079997 W CN2012079997 W CN 2012079997W WO 2014026311 A1 WO2014026311 A1 WO 2014026311A1
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plant
seq
gene
expression vector
tobacco
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PCT/CN2012/079997
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French (fr)
Chinese (zh)
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崔洪志
梁丽
王建胜
何云蔚
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创世纪转基因技术有限公司
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Priority to PCT/CN2012/079997 priority Critical patent/WO2014026311A1/en
Priority to CN201280004530.2A priority patent/CN103748224B/en
Publication of WO2014026311A1 publication Critical patent/WO2014026311A1/en

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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8271Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
    • C12N15/8273Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for drought, cold, salt resistance
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/11Protein-serine/threonine kinases (2.7.11)
    • C12Y207/11001Non-specific serine/threonine protein kinase (2.7.11.1), i.e. casein kinase or checkpoint kinase

Definitions

  • the present invention relates to protein kinases and their coding genes and applications, and more particularly to a cotton-derived cotton protein kinase GPK1 and its encoding gene, and its use in breeding transgenic plants with improved drought tolerance.
  • BACKGROUND OF THE INVENTION Abiotic stresses, such as drought, salt, extreme temperature, chemical pollution and oxygen damage, can cause serious damage to plant growth and development, and cause great losses to crop yield.
  • the impact of drought on crop yield is It takes the first place in natural adversity, and its harm is equivalent to the sum of other disasters. It is the bottleneck of agricultural development in many areas.
  • the world's dry and semi-dry areas account for 34% of the land area; China's dry and semi-arid areas account for 52% of the country's land area, and the annual area is 20 to 2.7 million hectares.
  • genes and their expression products can be divided into three categories: (1) genes and products involved in signal cascade amplification systems and transcriptional control; (2) genes and their expression products that directly contribute to the protection of biofilms and proteins; ) Proteins associated with the uptake and transport of water and ions.
  • genes and products involved in signal cascade amplification systems and transcriptional control (2) genes and their expression products that directly contribute to the protection of biofilms and proteins; ) Proteins associated with the uptake and transport of water and ions.
  • the first aspect of the present invention provides a gene encoding a protein kinase GPK1 of cotton, the sequence of which is SEQ ID NO: l o
  • a second aspect of the invention provides a recombinant expression vector comprising the gene of the first aspect of the invention, and the nucleotide sequence of the gene is operably linked to an expression control sequence of the expression vector; preferably, The vector is the rd29A-GhGPK1-2300 carrier shown in Fig. 2.
  • the third aspect of the present invention provides a recombinant cell comprising the nucleotide sequence of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention; preferably, the recombinant cell is a recombinant Agrobacterium cell .
  • a fourth aspect of the present invention provides a method for improving drought tolerance of a plant, comprising: introducing the nucleotide sequence of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention into a plant or plant tissue and The gene is expressed; preferably, the plant is tobacco.
  • a fifth aspect of the invention provides a method for producing a transgenic plant, comprising: cultivating a plant or a plant comprising the gene of the first aspect of the invention, the recombinant expression vector of the second aspect of the invention, under conditions effective to produce a plant Tissue;
  • the plant is tobacco.
  • a sixth aspect of the present invention provides the gene according to the first aspect of the present invention, the recombinant expression vector of the second aspect of the present invention or the recombinant cell of the third aspect of the present invention for improving drought tolerance of a plant and for use in plant breeding Use;
  • the plant is tobacco.
  • a seventh aspect of the present invention provides the amino acid sequence encoded by the gene of the first aspect of the invention, as shown in SEQ ID NO: 1.
  • DRAWINGS Figure 1 is a construction flow of a plant expression vector (rd29A-GhGPK1-2300) of GhGPK1.
  • Figure 2 is a plasmid map of the plant expression vector (rd29A-GhGPK1-2300) of GhGPK1.
  • Figure 3 shows the drought tolerance simulation results of GhGPK1 T1 transgenic tobacco plants (in the figure, T1R1; right, T1R3) and non-transgenic tobacco plants (left, CK) as controls.
  • Figure 4 shows the results of protein expression verification at the transcriptional level of transgenic T1 tobacco plants and non-transgenic control plants. detailed description
  • Example 1 Cotton SSH library construction under drought stress:
  • a subtractive library was constructed by inhibition subtractive hybridization using the method shown by Clontech's PCR-selectTM cDNA Subtraction Kit.
  • the mRNA of the leaves of the drought-treated cotton seedlings was used as a tester during the experiment, and the mRNA of the leaves of the untreated cotton seedlings was used as a driver.
  • the specific steps are as follows:
  • test seedlings were divided into two groups, each with 4 pots and 1 pot per pot.
  • the first group was the control group, cultured at 25 ° C, lighted, and normally watered.
  • the second group was drought treatment group, 25 °C, light culture, stop watering, treatment for 10 days. After treatment, cut the leaves of the top 1/3 of the two groups of seedlings in time, and quickly freeze with liquid nitrogen at -70 °C. Store in the refrigerator.
  • RNA extraction kit (invitrogen). Determined by HITACHI's UV spectrophotometer U-2001 Absorbance values of total RNA at 260 nm and 280 nm, 0D260/0D280 ratio of 1. 8-2 ⁇ 0, indicating high total RNA purity, total RNA integrity was detected by 1.0% agarose gel electrophoresis, The brightness of the 28S band is approximately twice that of the 18S band, indicating good RNA integrity.
  • the mRNA was isolated using Qiagen's Oligotex mRNA purification assay ( ⁇ (purification of polyA+ RNA from total RNA).
  • the gene In order to increase the availability of the Expressed sequence tag (EST) (unigene), the gene is not cleavable and the obtained sequence is in the untranslated region.
  • the laboratory uses Rsal, Hael ll to digest the double-stranded cDNA (according to the protocol described in the subtractive kit, obtained by reverse transcription of mRNA), and performs two sets of suppression subtraction. Other steps and methods are PCR-selected by Clontech. The method shown in the TM cDNA Subtraction Kit was used for suppression subtractive hybridization, and finally the second PCR product of the two groups of forward subtractive hybridization cDNA fragments was combined.
  • the second PCR product of the forward subtracted hybrid cDNA fragment (QIAquick PCR Purification Kit, purchased from Qiagen) was ligated to the pGEM-T Easy (purchased from Promega kit) vector according to the procedure of the pGEM_T Easy kit.
  • the specific steps are as follows: The following components were sequentially added using a 200 ⁇ l PCR tube: 2nd PCR product of purified forward subtractive hybridization cDNA fragment 3 ⁇ 1, ⁇ 4 ligase buffer 5 ⁇ 1, pGEM-T Easy vector 1 ⁇ 1, ⁇ 4 DNA The ligase 1 ⁇ ⁇ was ligated overnight at 4 °C. 10 ⁇ L of the ligation reaction product was added to 100 ⁇ L of competent E.
  • coli JMI09 (purchased from TAKARA), ice bath for 30 min, heat shock for 60 s, ice bath for 2 min, and 250 ⁇ L of LB medium (1 % Tryptone was purchased from 0X0ID, 0. 5% Yeast Extract was purchased from 0X0ID, 1% NaCl was purchased from Sinopharm.
  • LB medium 1 % Tryptone was purchased from 0X0ID, 0. 5% Yeast Extract was purchased from 0X0ID, 1% NaCl was purchased from Sinopharm.
  • cultured at 225 r/min for 30 min 200 ⁇ L of bacterial solution was planted in 50 LB (ibid.) /X-gal/IPTG (X-gal/IPTG purchased from TAKARA) of ⁇ g/mL ampicillin was incubated at 37 ° C for 18 h.
  • GhGPKl GSP1 SEQ ID NO : 4:
  • GhGPKl GSP2 SEQ ID NO: 5:
  • the first round of PCR amplification was carried out using SEQ ID NO: 4 and 3' primers AUAP (provided with the kit), using mRNA reverse transcribed cDNA as a template.
  • the specific steps are as follows: Ex Taq purchased from TAKARA, 50 ⁇ 1 PCR reaction system: 5 ⁇ 1 lO X Ex Buffer, 3 ⁇ 1 2. 5 mM dNTP, 2. 0 ⁇ 1 mRNA reverse transcribed cDNA, 1. 0 ⁇ 1 Ex Taq 10 ⁇ M primers SEQ ID NO: 4 and AUAP each 2.0 ⁇ l, and 35 ⁇ l of double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
  • the obtained PCR product was diluted 50-fold with double-distilled water, and then 2.0 ⁇ l was used as a template, and the second round of PCR amplification was carried out with SEQ ID NO: 5 and 3' primer AUAP, and the specific steps were as follows: 50 ⁇ 1 PCR reaction System: 5 ⁇ 1 10 X Ex Buffer, 3 ⁇ 1 2. 5 mM dNTP, 2. 0 ⁇ 1 diluted first round PCR product, 1. 0 ⁇ 1 Ex Taq 10 ⁇ ⁇ primer SEQ ID NO : 5 And AUAP each of 2. 0 ⁇ 1, and 35 ⁇ 1 of the double Steamed water.
  • PCR reaction conditions predenaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
  • the second PCR product was recovered from a fragment of approximately 1600 bp (Gel Extraction Kit from OMEGA). ligated to pGEM-T Easy Vector, transformed into E. coli JM109 (specifically as above), randomly picked 10 white colonies containing 50 ⁇ G/mL ampicillin was cultured in LB liquid medium, and cultured at 37 ° C overnight, glycerol was added to a final concentration of 20%, and stored at -80 ° C until use.
  • SEQ ID NO: 5 and the 3' primer AUAP were used for PCR amplification of the bacterial cells, and three positive clones were obtained, which were sent to Yingji Jieji (Shanghai) Trading Co., Ltd. for sequencing and sequencing, and the 3' end of the cDNA of the gene was obtained.
  • GhGPKl GSP3 SEQ ID NO: 6:
  • GhGPKl GSP4 SEQ ID NO: 7:
  • GhGPKl GSP5 SEQ ID NO: 8:
  • the experimental procedure was performed according to the kit instructions (5 'RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen).
  • the first round of PCR amplification was carried out using SEQ ID NO: 7 and 5' universal primer AAP (provided with the kit), and cDNA reverse transcription cDNA (reverse transcription primer SEQ ID NO: 6) was used as a template for the first round of PCR amplification.
  • the specific steps are as follows: Ex Taq was purchased from TAKARA, 50 ⁇ 1 PCR reaction system: 5 ⁇ 1 ⁇ ⁇ ⁇ Buffer, 3 ⁇ 1 2 ⁇ 5 mM dNTP, 2. 0 ⁇ 1 mRNA reverse transcribed cDNA, 1. 0 ⁇ 1 Ex Taq 10 ⁇ M of primers SEQ ID NO: 7 and AAP each of 2.0 ⁇ l, and 35 ⁇ l of double distilled water.
  • PCR reaction conditions predenaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 55 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
  • the obtained PCR product was diluted 50 times with double distilled water, and then 2.0 ⁇ l was used as a template, and the second round of PCR amplification was carried out with SEQ ID ⁇ 0:8 and 3' primer AUAP, and the specific steps were as follows: 50 ⁇ 1 PCR reaction System: 5 ⁇ 1 ⁇ ⁇ ⁇ Buffer, 3 ⁇ 1 2. 5 mM dNTP, 2. 0 ⁇ 1 diluted first round PCR product, 1.
  • the obtained 5 ' RACE product was cloned and sequenced, and spliced with the 3 ' RACE product sequencing result.
  • the full-length cDNA sequence of GhGPK1 was obtained as SEQ ID NO: 19.
  • GhGPKF SEQ ID NO: 9:
  • GhGPKR SEQ ID NO: 10:
  • GhGPK1 The full length of GhGPK1 was cloned by SEQ ID NO: 9 and SEQ ID NO: 10.
  • PCR reaction was carried out using TaKaRa's PrimeSTAR HS DNA polymerase and cotton cDNA as a template.
  • 50 ⁇ 1 PCR reaction system 10 ⁇ 1 5 X PS Buffer, 3 ⁇ 1 2. 5 mM dNTP, 2. 0 ⁇ 1 cDNA, 1. 0 ⁇ 1 PrimeSTAR, 10 ⁇ ⁇ primer SEQ ID NO: 9 and SEQ ID NO: 10 each of 2 ⁇ 0 ⁇ 1, and 30 ⁇ of double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
  • PCR amplification product plus A tail PCR product plus 2.5 times absolute ethanol, _20 ° C for 10 minutes, centrifuge, remove the supernatant, air dry, dissolved in 21 ⁇ ⁇ double distilled water.
  • a DNA fragment of about 1900 bp was recovered (Omega recovery kit), ligated into pGEM T-easy vector, transformed into JM109 (method as above), and 10 white colonies were randomly picked up in LB liquid containing 50 g/mL ampicillin.
  • SEQ ID NO: 9 and SEQ ID NO: 10 were subjected to bacterial cell PCR amplification (reaction system and reaction conditions are the same as above), and 4 positive clones were obtained, which were sent to Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing, and the sequence was SEQ ID. NO : 2.
  • Amino acid sequence of GPK1 protein SEQ ID NO: 1
  • Nucleotide sequence of the GhGPK1 encoding gene SEQ ID NO: 2
  • the plant binary expression vector PCAMBIA2300 (purchased from Beijing Dingguo Changsheng Biotechnology Co., Ltd.) was selected as the plant expression vector, and the 35S promoter containing the double enhancer of the ⁇ gene was replaced with the Pnos promoter to reduce the expression of prion protein in plants. .
  • the inducible promoters rd29A and Tnos were selected as promoters and terminators of the GhGPK1 gene.
  • Pnos were amplified using the plant expression vector PBI 121 (purchased from Beijing Huaxia Ocean Technology Co., Ltd.) using primers SEQ ID NO: 11 and SEQ ID NO: 12, using TaKaRa's PrimeSTAR HS DNA polymerase.
  • 50 l PCR reaction system 10 ⁇ 15 XPSBuffer, 3 ⁇ 12 ⁇ 5 mM dNTP, 1 ⁇ 0 ⁇ 1 PBI121, 1.0 ⁇ 1 PrimeSTAR, 10 ⁇ primers SEQ ID NO: 11 and SEQ ID NO: 12 each 2.0 ⁇ 1, And 31 ⁇ of double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 56 °C for 30 s, extension at 72 °C for 30 s, after 33 cycles, and extension at 72 °C for 10 min.
  • pCAMBIA2300_l was obtained by EcoRI, Bglll digestion with PCAMBIA2300 (promega, T4 ligase cassette).
  • SEQ ID NO: 13 and SEQ ID NO: 14 amplify Tnos using PBI121 as a template, using TaKaRa's PrimeSTAR HS DNA polymerase.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 30 s, after 33 cycles, extension at 72 °C for 10 min by Kpnl, EcoRI digestion Connect to pCAMBIA2300-l (promega T4 ligase cassette) to obtain pCAMBIA2300-2
  • SEQ ID NO: 15 and SEQ ID NO: 16 Amplification of the Arabidopsis thaliana rd29A promoter using Arabidopsis thaliana (Columbia type, available from www. arabidopsis.org) DNA as a template (see Zeng J., et L. 2002, Preparation) Of total DNA from "recalcit rant plant taxa", Acta Bot. Sin., 44 (6): Method 694-697 for extracting Arabidopsis DNA).
  • PrimeSTAR HS DNA polymerase from TaKaRa was used. 50 ⁇ 1 PCR reaction system: 10 ⁇ 1 5 X PS Buffer, 3 ⁇ 1 2. 5 mM dNTP, 1. 0 ⁇ 1 Arabidopsis DNA, 1.
  • SEQ ID NO: 17 and SEQ ID NO: 18 Amplified GhGPK1 (template is GhGPK1 obtained in Example 2), using TaKaRa's PrimeSTAR HS DNA polymerase. 50 ⁇ ⁇ PCR reaction system: 10 ⁇ 1 5 X PS Buffer, 3 ⁇ 1 2. 5 mM dNTP, 1. 0 ⁇ 1 GhGPKl -pGEM, 1. 0 ⁇ 1 PrimeSTAR, 10 ⁇ ⁇ primer SEQ ID NO : 17 and SEQ ID NO: 18 each of 2.0 ⁇ l, and 31 ⁇ l of double distilled water.
  • PCR reaction conditions pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
  • the plant expression vector rd29A_GhGPKl_2300 was obtained by cleavage of Kpnl and Sail (connection method as above) PCAMBIA2300-3.
  • Agrobacterium LBA4404 (available from Biovector Science Lab, Inc) Competent preparation: Agrobacterium LBA4404 was plated on LB solid medium containing 50 ⁇ g/ml rifampicin and 50 ⁇ g/ml streptomycin 1-2 days in advance Single spot inoculation, culture at 28 ° C for 1 to 2 days. Single colonies were picked and inoculated into 5 ml of LB liquid medium containing 50 ⁇ g/ml rifampicin and 50 ⁇ g/ml streptomycin, and cultured overnight (about 12-16 h) to 0D600 at 28 °C. The value is 0.4, and a seed bacterial liquid is formed.
  • Transformation of Agrobacterium Thaw competent cells on ice, add 1 ⁇ l of plasmid to 40 ⁇ l of competent cells, mix and ice bath for about 10 min. Transfer the mixture of competent and DNA to the pre-cooled electric shock cup with a gun and tap to bring the suspension to the bottom, taking care not to have air bubbles. Place the electric shock cup (purchased from bio-rad) on the slide of the shock chamber and push the slide to place the electric shock cup on the base electrode of the shock chamber. When using a 0. lcm electric shock cup, the program of MicroPulser (purchased from bio-rad) is set to "Agr" and the electric shock is once. Immediately remove the electric shock cup and add LB medium pre-warmed at 28 °C.
  • the leaves of the sterile seedlings were cut into 5 mm ⁇ 5 mm leaf discs, and the leaf discs were inoculated with Agrobacterium containing the expression vector rd29A-GhGPKl-2300 in the logarithmic growth phase for 10 min, and the bacteria were sucked up in the dark. Incubate for 2 days (MS medium).
  • the leaves were transferred to differentiation medium (MS+1 mg/L cytokinin (BA) + 0.1 mg/L naphthaleneacetic acid (face +50 mg/L kanamycin + 500 mg/L cephalosporin) After incubation for about 45 days under light conditions, the buds should be grown and transferred to rooting medium (MS+50 mg/L kanamycin + 500 mg/L cephalosporin) for about 30 days, until the root system is developed. The seedlings were then transferred to MS medium supplemented with 500 mg/L cephalosporin for number storage.
  • differentiation medium MS+1 mg/L cytokinin (BA) + 0.1 mg/L naphthaleneacetic acid (face +50 mg/L kanamycin + 500 mg/L cephalosporin)
  • rooting medium MS+50 mg/L kanamycin + 500 mg/L cephalosporin
  • the obtained transgenic tobacco leaves were extracted, and DNA (the Arabidopsis thaliana DNA extraction method in Example 3) was used, and SEQ ID NO: 9: and SEQ ID NO: 10 (50 ⁇ l PCR reaction system: 5 ⁇ 1 ⁇ ⁇ ⁇ Buffer, 3 ⁇ 1 2 ⁇ 5 mM dNTP, 2. 0 ⁇ 1 DNA, 1. 0 ⁇ 1 Ex Taq 10 ⁇ M primers SEQ ID NO: 9 and SEQ ID NO: 10 each 2. 0 ⁇ 1, and 35 ⁇ 1 double distilled water.
  • the sterilized vermiculite was soaked in 1/2 MS medium.
  • T. R1-T. R20 and control tobacco seeds were sown on vermiculite, 15 seeds per pot, 25 ° C, 10 hours light culture / 14 hours dark culture cycle, 1/2 MS every 5 days, 25 days after culture, each pot was kept 4-5 seedlings of uniform size, drought test, transgenic tobacco, control tobacco drought for 14 days (no watering), 25 ° C, 10 hours light culture / 14 hours dark culture cycle.
  • T1 transgenic plants plants grown from seeds of TO transgenic plants
  • Example 7 Verification of GPK1 protein expression at the transcriptional level
  • PCR was performed using TaKaRa's PrimeSTAR HS DNA polymerase with reverse transcribed cDNA as a template.
  • 50 ⁇ 1 PCR reaction system 10 ⁇ ⁇ 5 X PS Buffer, 3 ⁇ 1 2. 5 mM dNTP, 2. 0 ⁇ 1 cDNA, 1. 0 ⁇ 1 PrimeSTAR, 10 ⁇ ⁇ primer SEQ ID NO : 9 ⁇ SEQ ID NO: 10 each of 2.0 ⁇ l, and 30 ⁇ of double distilled water.
  • M is DNA Ladder Marker (DL2000, purchased from Shenzhen Ruizhen Biotechnology Co., Ltd.), 1-5 is control tobacco, and 6-18 is drought-tolerant transgenic tobacco T1 plant, 19-24 It is a T1 generation plant that is not tolerant to transgenic tobacco.
  • the size of the band shown in the figure is consistent with the size of the GhGPKl-1 gene. The results showed that the control tobacco did not transcribe GhGPK1 mRNA, and the T1 generation of drought-tolerant transgenic tobacco had stronger transcription of GhGPK1, and the T1 generation of the drought-tolerant transgenic tobacco had no transcription or transcription.

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Abstract

Provided are a polypeptide sequence and encoded gene of the protein kinase GPK1 originating from cotton. Also provided are the uses of the protein kinase GPK1 and the encoded gene thereof in the cultivation of a transgenic plant with improved drought tolerance.

Description

一个棉花蛋白激酶及其编码基因与应用  A cotton protein kinase and its coding gene and application
技术领域 本发明涉及蛋白激酶及其编码基因与应用,特别是涉及一个来源于棉花的棉花蛋 白激酶 GPK1及其编码基因, 以及其在培育耐旱性提高的转基因植物中的应用。 技术背景 非生物胁迫, 如干旱、 盐渍、 极端温度、 化学污染和氧损伤等能够对植物的生长 发育造成严重的危害, 对作物产量造成极大损失, 其中干旱对作物产量的影响,在诸 多自然逆境中占首位, 其危害相当于其它灾害之和, 是许多地区是农业发展的瓶颈。 据统计, 世界干早、 半干早地区占陆地面积的 34% ; 我国干早、 半干旱地区约占国土 面积的 52%, 年受早面积达 20〜270万公顷 , 全国灌溉区每年缺水约 30亿立方米, 因 缺水而少收粮食 350〜40亿公斤; 特别是我国主要产粮区如华北、 东北和西北, 是我 国缺水最严重的地区, 春旱频繁达到十年九遇。  FIELD OF THE INVENTION The present invention relates to protein kinases and their coding genes and applications, and more particularly to a cotton-derived cotton protein kinase GPK1 and its encoding gene, and its use in breeding transgenic plants with improved drought tolerance. BACKGROUND OF THE INVENTION Abiotic stresses, such as drought, salt, extreme temperature, chemical pollution and oxygen damage, can cause serious damage to plant growth and development, and cause great losses to crop yield. The impact of drought on crop yield is It takes the first place in natural adversity, and its harm is equivalent to the sum of other disasters. It is the bottleneck of agricultural development in many areas. According to statistics, the world's dry and semi-dry areas account for 34% of the land area; China's dry and semi-arid areas account for 52% of the country's land area, and the annual area is 20 to 2.7 million hectares. About 3 billion cubic meters, due to lack of water, less than 350 to 4 billion kilograms of grain; especially China's major grain-producing areas such as North China, Northeast China and Northwest China are the most severe areas in China, and the spring drought frequently reaches 10 years and nine times. .
由于植物的耐胁迫性大多属于数量性状, 现有可利用的种质资源匮乏, 采用常规 育种技术改良植物胁迫耐性的难度相当大, 培育出真正的耐胁迫品种就尤为困难。近 年来, 随着对植物抗逆分子机理研究的不断深入和分子生物学技术的迅猛发展, 抗逆 研究已经从生理水平深入到分子水平, 促进了植物抗逆基因工程的发展。 当植物在受 到胁迫时会产生相应的应答反应, 来降低或消除给植株带来的危害。植物的这种应答 反应是一个涉及多基因、 多信号途径、 多基因产物的复杂过程。这些基因及其表达产 物可以分为 3 类: (1)参与信号级联放大系统和转录控制的基因及产物; (2) 直接对保 护生物膜和蛋白质起作用的基因及其表达产物; (3 ) 与水和离子的摄入和转运相关 的蛋白质。 近年来, 通过转基因技术提高植物对胁迫耐受能力的研究, 以及对胁迫具 有耐受能力的农作物、旱生植物和盐生植物的研究都取得了显著的成果, 对胁迫相关 基因和信号转导系统也有了更进一步的了解 (Liu Q.1998.Two transcrip tion facto rs,DREBl and DREB2,w ith an EREBP/AP2 DNA binding domain, separate two cellular signal transduction pathways in drought- and low temperature -responsive gene exp ression, respectively, in A rabidopsis. Plant Cell, 10: 1391-1406; KAN GJY.2002. A rabid op sis basic leucine zipper p ro teins that mediate stress2responsive abscisic acid signaling。 Plant Cell, 14: 343- 357; ABE H.2003.A rabid op sis AtMYC2 (bHLH) and AtMYB2(MYB) function as transcrip tional activato rs in abscisic acid signaling. Plant Cell, 15: 63-78. ) 。 但就目前的研究状况而言, 由于其机制十分复杂,许多植物对逆境下的生物化 学和生理学上的响应机制仍有待深入研究。在抗逆应答基因的功能及表达调控方面 的研究占多数, 但抗逆相关的信号传递途径之间的联系以及整个信号传递网络系统 的机理还有待进一步研究。 发明内容 本发明人利用 SSH与 RACE相结合的方法克隆出了棉花的一个蛋白激酶 (本 文命名为 GPK1 ) 的编码基因的 DNA序列。 并发现将其导入转基因植株后, 可明 显改善转基因植株的耐旱性, 而且这些性状可稳定遗传。 Since the stress tolerance of plants is mostly quantitative, the available germplasm resources are scarce. It is very difficult to improve the stress tolerance of plants by conventional breeding techniques. It is especially difficult to cultivate true stress-tolerant varieties. In recent years, with the deepening of research on the molecular mechanism of plant stress resistance and the rapid development of molecular biology technology, stress resistance research has progressed from physiological level to molecular level, which promoted the development of plant stress resistance genetic engineering. When plants are stressed, they will respond accordingly to reduce or eliminate the damage to plants. This response of plants is a complex process involving multiple genes, multiple signaling pathways, and multiple gene products. These genes and their expression products can be divided into three categories: (1) genes and products involved in signal cascade amplification systems and transcriptional control; (2) genes and their expression products that directly contribute to the protection of biofilms and proteins; ) Proteins associated with the uptake and transport of water and ions. In recent years, studies on the ability of plants to improve stress tolerance through transgenic techniques, as well as studies on stress-tolerant crops, xerophytes and halophytes have yielded significant results for stress-related genes and signal transduction. The system has a further understanding (Liu Q.1998. Two transcrip tion facto rs, DREB1 and DREB2, w ith an EREBP/AP2 DNA binding domain, separate two cellular signal transduction pathways in drought- and low temperature - responsive gene exp ression Plant, 10: 1391-1406; KAN GJY.2002. A rabid op sis basic leucine zipper p ro teins that mediate stress 2responsive abscisic acid signaling. Plant Cell, 14: 343-357; ABE H. 2003.A rabid op sis AtMYC2 (bHLH) and AtMYB2(MYB) Function as transcrip tional activato rs in abscisic acid signaling. Plant Cell, 15: 63-78. However, as far as the current research situation is concerned, due to the complexity of its mechanism, the biochemical and physiological response mechanisms of many plants to stress remain to be further studied. Studies on the function and expression regulation of stress-responsive genes are dominant, but the link between stress-resistance-related signaling pathways and the mechanism of the entire signaling network system remains to be further studied. SUMMARY OF THE INVENTION The present inventors cloned a DNA sequence encoding a gene of a protein kinase (designated herein as GPK1) of cotton using a combination of SSH and RACE. It was found that the introduction of transgenic plants significantly improved the drought tolerance of transgenic plants, and these traits were stably inherited.
本发明第一方面提供棉花的一个蛋白激酶 GPK1的编码基因,其序列为 SEQ ID NO: l o  The first aspect of the present invention provides a gene encoding a protein kinase GPK1 of cotton, the sequence of which is SEQ ID NO: l o
本发明第二方面提供一种重组表达载体, 其含有本发明第一方面所述的基因并 且所述基因的核苷酸序列与所述表达载体的表达控制序列可操作地连接; 优选地, 所述载体为附图 2所示的 rd29A-GhGPKl-2300载体。  A second aspect of the invention provides a recombinant expression vector comprising the gene of the first aspect of the invention, and the nucleotide sequence of the gene is operably linked to an expression control sequence of the expression vector; preferably, The vector is the rd29A-GhGPK1-2300 carrier shown in Fig. 2.
本发明第三方面提供一种重组细胞, 其含有本发明第一方面所述的核苷酸序列 或者本发明第二方面所述的重组表达载体; 优选地, 所述重组细胞为重组农杆菌细 胞。  The third aspect of the present invention provides a recombinant cell comprising the nucleotide sequence of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention; preferably, the recombinant cell is a recombinant Agrobacterium cell .
本发明第四方面提供一种改善植物耐旱性的方法, 包括: 将本发明第一方面所 述的核苷酸序列或者本发明第二方面所述的重组表达载体导入植物或植物组织并 使所述基因表达; 优选地, 所述植物是烟草。  A fourth aspect of the present invention provides a method for improving drought tolerance of a plant, comprising: introducing the nucleotide sequence of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention into a plant or plant tissue and The gene is expressed; preferably, the plant is tobacco.
本发明第五方面提供一种制备转基因植物的方法, 包括: 在有效产生植物的条 件下培养含有本发明第一方面所述的基因、本发明第二方面所述的重组表达载体的 植物或植物组织; 优选地, 所述植物是烟草。  A fifth aspect of the invention provides a method for producing a transgenic plant, comprising: cultivating a plant or a plant comprising the gene of the first aspect of the invention, the recombinant expression vector of the second aspect of the invention, under conditions effective to produce a plant Tissue; Preferably, the plant is tobacco.
本发明第六方面提供本发明第一方面所述的基因、本发明第二方面所述的重组 表达载体或者本发明第三方面所述的重组细胞用于改善植物耐旱性以及用于植物 育种的用途; 优选地, 所述植物是烟草。  A sixth aspect of the present invention provides the gene according to the first aspect of the present invention, the recombinant expression vector of the second aspect of the present invention or the recombinant cell of the third aspect of the present invention for improving drought tolerance of a plant and for use in plant breeding Use; Preferably, the plant is tobacco.
本发明第七方面提供发明第一方面所述的基因编码的氨基酸序列, 如 SEQ ID ΝΟ:1所示。 附图说明 图 1是 GhGPKl的植物表达载体 (rd29A-GhGPKl-2300)的构建流程。 A seventh aspect of the present invention provides the amino acid sequence encoded by the gene of the first aspect of the invention, as shown in SEQ ID NO: 1. DRAWINGS Figure 1 is a construction flow of a plant expression vector (rd29A-GhGPK1-2300) of GhGPK1.
图 2是 GhGPKl的植物表达载体 (rd29A-GhGPKl-2300)的质粒图。  Figure 2 is a plasmid map of the plant expression vector (rd29A-GhGPK1-2300) of GhGPK1.
图 3是 GhGPKl T1代转基因烟草植株(图中, T1R1 ; 右, T1R3 )和作为对照 的非转基因烟草植株 (图左, CK) 的耐旱模拟实验结果。  Figure 3 shows the drought tolerance simulation results of GhGPK1 T1 transgenic tobacco plants (in the figure, T1R1; right, T1R3) and non-transgenic tobacco plants (left, CK) as controls.
图 4是转基因 T1代烟草植株和非转基因对照植株在转录水平上的蛋白表达验 证结果。 具体实施方式  Figure 4 shows the results of protein expression verification at the transcriptional level of transgenic T1 tobacco plants and non-transgenic control plants. detailed description
下面结合非限制性实施例对本发明进行进一步说明。 实施例 1、 干旱胁迫下棉花 SSH文库构建:  The invention is further illustrated by the following non-limiting examples. Example 1. Cotton SSH library construction under drought stress:
具体方法为:  The specific method is:
利用 Clontech公司的 PCR-selectTM cDNA Subtraction Kit 所示的方法通过 抑制差减杂交方法构建差减文库。 在实验过程中以干旱处理的棉花幼苗的叶子的 mRNA作为样本(tester), 以未处理的棉花幼苗的叶子的 mRNA作为对照(driver)。 具体步骤简述如下:  A subtractive library was constructed by inhibition subtractive hybridization using the method shown by Clontech's PCR-selectTM cDNA Subtraction Kit. The mRNA of the leaves of the drought-treated cotton seedlings was used as a tester during the experiment, and the mRNA of the leaves of the untreated cotton seedlings was used as a driver. The specific steps are as follows:
( 1 ) 供试材料:  (1) Test materials:
冀棉 14 (国家棉花中期库, 获取单位中国棉花研究所, 统一编号: ZM-30270) 播种到灭过菌的蛭石上, 在 25°C、 光周期 16h/8h条件下培养, 每周浇 1/2MS培养 基 (9· 39 mM KN03, 0. 625 mM KH2P04, 10. 3 mM NH4N03, 0. 75 mM MgS04, 1. 5 mM CaC12, 50 μ Μ KI , 100 μ Μ H3B03, 100 μ Μ MnS04, 30 μ M ZnS04, 1 μ Μ Na2Mo04, 0. Ι μ Μ CoC12, 100 μ M Na2EDTA, 100 μ Μ FeS04) 一次。 当苗株高达 25_30cm时用 于实验。  冀棉14 (National Cotton Medium-Term Library, obtained by the China Cotton Research Institute, Uniform No.: ZM-30270) Seeded on vermiculite vermiculite, cultured at 25 ° C, photoperiod 16 h / 8 h, poured 1 per week /2MS medium (9·39 mM KN03, 0. 625 mM KH2P04, 10. 3 mM NH4N03, 0.75 mM MgS04, 1. 5 mM CaC12, 50 μ Μ KI , 100 μ Μ H3B03, 100 μ Μ MnS04, 30 μ M ZnS04, 1 μ Μ Na2Mo04, 0. Ι μ Μ CoC12, 100 μ M Na2EDTA, 100 μ Μ FeS04) once. It was used for experiments when the seedlings were as high as 25_30 cm.
( 2 ) 材料处理:  (2) Material handling:
将供试幼苗分为 2组, 每组 4盆, 每盆 1株。 第一组为对照组, 在 25°C、 光照 培养, 正常浇灌。 第二组为干旱处理组, 25°C、 光照培养, 停止浇灌, 处理 10天, 处理完毕后及时剪取两组幼苗顶端 1/3 的叶片, 用液氮迅速冷冻后, 于 -70°C冰箱 中保存。  The test seedlings were divided into two groups, each with 4 pots and 1 pot per pot. The first group was the control group, cultured at 25 ° C, lighted, and normally watered. The second group was drought treatment group, 25 °C, light culture, stop watering, treatment for 10 days. After treatment, cut the leaves of the top 1/3 of the two groups of seedlings in time, and quickly freeze with liquid nitrogen at -70 °C. Store in the refrigerator.
( 3 ) 总 RNA提取:  (3) Total RNA extraction:
分别取对照组和干旱处理组的棉花叶子 0. 5g, 用植物 RNA 提取试剂盒 ( invitrogen)提取棉花的总 RNA。用 HITACHI公司的紫外分光光度计 U-2001测定 总 RNA在 260 nm和 280 nm的吸光度值, 0D260/0D280比值为 1. 8-2· 0, 表明总 RNA 纯度较高,用 1. 0%的琼脂糖凝胶电泳检测总 RNA的完整性, 28S条带的亮度约为 18S 条带的 2倍, 表明 RNA的完整性良好。 使用 Qiagen 公司的 Ol igotex mRNA 纯化试 齐 [^ (purification of polyA+ RNA from total RNA)分离 mRNA。 The cotton leaves of the control and drought-treated groups were taken 0.5 g, and the total RNA of cotton was extracted with a plant RNA extraction kit (invitrogen). Determined by HITACHI's UV spectrophotometer U-2001 Absorbance values of total RNA at 260 nm and 280 nm, 0D260/0D280 ratio of 1. 8-2· 0, indicating high total RNA purity, total RNA integrity was detected by 1.0% agarose gel electrophoresis, The brightness of the 28S band is approximately twice that of the 18S band, indicating good RNA integrity. The mRNA was isolated using Qiagen's Oligotex mRNA purification assay (^ (purification of polyA+ RNA from total RNA).
( 4) 抑制消减杂交:  (4) Inhibition subtractive hybridization:
为了增加获得表达序列标签 ( Expressed sequence tag, EST) (unigene)的有 效性, 避免基因无酶切位点及所获得序列在非翻译区。 本实验室用 Rsal, Hael l l 分别对双链 cDNA (按照消减试剂盒中记载的方案, 由 mRNA逆转录获得)进行消化, 做两组抑制差减, 其他步骤及方法按 Clontech 公司的 PCR-select™ cDNA Subtraction Kit试剂盒所示的方法进行抑制消减杂交, 最后合并两组两组正向消 减杂交 cDNA片段的第二次 PCR产物。  In order to increase the availability of the Expressed sequence tag (EST) (unigene), the gene is not cleavable and the obtained sequence is in the untranslated region. The laboratory uses Rsal, Hael ll to digest the double-stranded cDNA (according to the protocol described in the subtractive kit, obtained by reverse transcription of mRNA), and performs two sets of suppression subtraction. Other steps and methods are PCR-selected by Clontech. The method shown in the TM cDNA Subtraction Kit was used for suppression subtractive hybridization, and finally the second PCR product of the two groups of forward subtractive hybridization cDNA fragments was combined.
( 5 ) cDNA消减文库的构建与初步筛选、 克隆、 鉴定  (5) Construction and preliminary screening, cloning and identification of cDNA subtractive library
正向消减杂交 cDNA片段的第二次 PCR产物 (QIAquick PCR Purification Kit 纯化, 购自 Qiagen) 与 pGEM-T Easy (购自 Promega试剂盒)载体连接, 依照 pGEM_T Easy试剂盒的程序, 具体步骤如下: 用 200 μ 1 PCR管依次加入下列成分: 纯化的 正向差减杂交 cDNA片段的第二次 PCR产物 3 μ 1, Τ4连接酶缓冲液 5 μ 1, pGEM-T Easy载体 1 μ 1, Τ4 DNA连接酶 1 μ ΐ , 于 4 °C连接过夜。 取 10 μ L连接反应产 物, 加入到 100 μ L感受态大肠杆菌 JMI09 (购自 TAKARA)中, 冰浴 30 min, 热休克 60 s、 冰浴 2 min,另加 250 μ L LB培养液 (1% Tryptone购自 0X0ID, 0. 5% Yeast Extract购自 0X0ID, 1% NaCl购自国药) 置 37°C水浴中, 以 225 r/min振荡培养 30 min, 取 200 μ L菌液种植于含 50 μ g/mL氨苄青霉素的 LB (同上) /X-gal/IPTG (X-gal/IPTG购自 TAKARA) 培养板上, 37°C培育 18 h。 计数培养板中直径〉 1 mm 的清晰白色及蓝色菌落数, 随机挑取 360个白色菌落 (编号: Gh-D001至 Gh-D360)。 将所有白色克隆挑于含有 50 g/mL氨苄青霉素的 LB 液体培养基的 96 孔细胞培 养板 (CORNING)中, 37°C培养过夜后加甘油至终浓度 20%, 于 - 80°C保存备用。 以巢 式 PCR 引物 Primer 1 和 Primer 2R ( Clontech 公司的 PCR-selectTM cDNA Subtraction Kit试剂盒自带) 进行菌液 PCR扩增, 得到 292个阳性克隆, 对所有 阳性克隆在送英潍捷基 (上海) 贸易有限公司测序  The second PCR product of the forward subtracted hybrid cDNA fragment (QIAquick PCR Purification Kit, purchased from Qiagen) was ligated to the pGEM-T Easy (purchased from Promega kit) vector according to the procedure of the pGEM_T Easy kit. The specific steps are as follows: The following components were sequentially added using a 200 μl PCR tube: 2nd PCR product of purified forward subtractive hybridization cDNA fragment 3 μ 1, Τ4 ligase buffer 5 μ 1, pGEM-T Easy vector 1 μ 1, Τ4 DNA The ligase 1 μ ΐ was ligated overnight at 4 °C. 10 μL of the ligation reaction product was added to 100 μL of competent E. coli JMI09 (purchased from TAKARA), ice bath for 30 min, heat shock for 60 s, ice bath for 2 min, and 250 μL of LB medium (1 % Tryptone was purchased from 0X0ID, 0. 5% Yeast Extract was purchased from 0X0ID, 1% NaCl was purchased from Sinopharm. In a 37°C water bath, cultured at 225 r/min for 30 min, 200 μL of bacterial solution was planted in 50 LB (ibid.) /X-gal/IPTG (X-gal/IPTG purchased from TAKARA) of μ g/mL ampicillin was incubated at 37 ° C for 18 h. Count the number of clear white and blue colonies with a diameter > 1 mm in the culture plate and randomly pick 360 white colonies (number: Gh-D001 to Gh-D360). All white clones were picked in 96-well cell culture plates (CORNING) containing LB liquid medium containing 50 g/mL ampicillin, cultured overnight at 37 ° C, glycerol was added to a final concentration of 20%, and stored at -80 ° C. . The nested PCR primers Primer 1 and Primer 2R (Clontech's PCR-selectTM cDNA Subtraction Kit kit) were used to carry out PCR amplification of the broth, and 292 positive clones were obtained. All positive clones were sent to Yingjieji (Shanghai). ) Trading Co., Ltd. sequencing
( 6 ) 差异克隆的 cDNA测序分析:  (6) cDNA sequencing analysis of differential clones:
将 DNA 测序结果去除载体和不明确序列及冗余的 cDNA 后, 共得到 180 个 After removing the DNA sequencing results from the vector and the ambiguous sequence and the redundant cDNA, a total of 180 samples were obtained.
EST (unigene)。经 BlastN发现其中 102条 unigene 在 GenBank 中有同源序列(蛋 白同源性 50%以上), 33条 EST功能未知或者为假定蛋白, 另有 45条未获得同源匹 配, 推测可能是处于 3 '、 5 ' 末端非翻译区的较短序列。 实施例 2 棉花蛋白激酶类编码基因 GhGPKl的克隆 EST (unigene). It was found by BlastN that 102 unigenes have homologous sequences in GenBank (more than 50% protein homology), 33 EST functions are unknown or hypothetical proteins, and another 45 have not obtained homologous It is speculated that it may be a shorter sequence in the untranslated region at the 3 ', 5 ' end. Example 2 Cloning of cotton protein kinase gene encoding gene GhGPK1
克隆子 Gh-D193去掉冗余 DNA后, 序列为 SEQ ID No : 3, 序列分析表明该序列 的编码的氨基酸序列属于促分裂原活化蛋白激酶, 本文将克隆子 Gh-D193编码的全 长基因命名为 GhGPKl , 对应的蛋白命名为 GPK1。  After the cloned Gh-D193 was detached from the redundant DNA, the sequence was SEQ ID No: 3. Sequence analysis indicated that the encoded amino acid sequence of the sequence belonged to the mitogen-activated protein kinase. The full-length gene encoded by the clone Gh-D193 was named here. For GhGPKl, the corresponding protein was named GPK1.
SEQ ID No: 3 SEQ ID No: 3
1 ACACTAAACA ACTTTTGTTG GGACTGGAAT ATCTTCACAA AAATAGAATC GTGCATAGAG 1 ACACTAAACA ACTTTTGTTG GGACTGGAAT ATCTTCACAA AAATAGAATC GTGCATAGAG
61 ACATCAAGGG AGCAAACATT CTTGTGGATA ACAAGGGTTG TATCAAACTT GCAGACTTTG61 ACATCAAGGG AGCAAACATT CTTGTGGATA ACAAGGGTTG TATCAAACTT GCAGACTTTG
121 GTGCATCCAA AAAAGTTGTC GAGTTGGCTA CAATAAATGG AGCCAAGTCA ATGAAGGGAA 181 CTCCTTATTG GATGGCTCCT GAAGTTATTC TCCAAACTGG GCATAGCTTC TCTGCCGATA 241 TTTGGAGTGT TGGCTGT 121 GTGCATCCAA AAAAGTTGTC GAGTTGGCTA CAATAAATGG AGCCAAGTCA ATGAAGGGAA 181 CTCCTTATTG GATGGCTCCT GAAGTTATTC TCCAAACTGG GCATAGCTTC TCTGCCGATA 241 TTTGGAGTGT TGGCTGT
GhGPKl全长基因的克隆 Cloning of the full-length gene of GhGPK1
根据已经获得的 Gh-D193基因片段,设计两条特异性引物,作为 3 ' RACE的 5 ' 端特异性引物。  Based on the Gh-D193 gene fragment that has been obtained, two specific primers were designed as the 5'-end specific primer for 3' RACE.
GhGPKl GSP1 : SEQ ID NO : 4:  GhGPKl GSP1 : SEQ ID NO : 4:
ACTTTTGTTGGGACTGGAAT AT  ACTTTTGTTGGGACTGGAAT AT
GhGPKl GSP2: SEQ ID NO : 5:  GhGPKl GSP2: SEQ ID NO: 5:
CAAAAATAGAATCGTGCATAGAG  CAAAAATAGAATCGTGCATAGAG
实验步骤按试剂盒说明书操作 (3 ' RACE System for Rapid Ampl ification of cDNA Ends试剂盒购自 invitrogen公司)  The experimental procedure was carried out according to the kit instructions (3 ' RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen)
用 SEQ ID NO : 4与 3 ' 端引物 AUAP (试剂盒自带), 以 mRNA逆转录的 cDNA为 模板进行第一轮 PCR扩增。 具体步骤如下: Ex Taq 购自 TAKARA, 50 μ 1 PCR反应 体系: 5 μ 1 lO X Ex Buffer, 3 μ 1 2. 5 mM的 dNTP, 2. 0 μ 1 mRNA反转录的 cDNA, 1. 0 μ 1 Ex Taq 10 μ M的引物 SEQ ID NO : 4和 AUAP各 2. 0 μ 1, 以及 35 μ 1 的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 2 min, 33个循环后, 72°C 延伸 10 min。  The first round of PCR amplification was carried out using SEQ ID NO: 4 and 3' primers AUAP (provided with the kit), using mRNA reverse transcribed cDNA as a template. The specific steps are as follows: Ex Taq purchased from TAKARA, 50 μ 1 PCR reaction system: 5 μ 1 lO X Ex Buffer, 3 μ 1 2. 5 mM dNTP, 2. 0 μ 1 mRNA reverse transcribed cDNA, 1. 0 μ 1 Ex Taq 10 μ M primers SEQ ID NO: 4 and AUAP each 2.0 μl, and 35 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
所得的 PCR产物用双馏水稀释 50倍后取 2. 0 μ 1作为模板, 用 SEQ ID NO : 5 与 3 ' 端引物 AUAP进行第二轮 PCR扩增, 具体步骤如下: 50 μ 1 PCR反应体系: 5 μ 1 10 X Ex Buffer, 3 μ 1 2. 5 mM的 dNTP, 2. 0 μ 1稀释的第一轮 PCR产物, 1. 0 μ 1 Ex Taq 10 μ Μ的引物 SEQ ID NO : 5和 AUAP各 2. 0 μ 1, 以及 35 μ 1的双 蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 2min, 33个循环后, 72°C 延伸 10 min。第二次 PCR产物回收片段约为 1600bp 条带 (Gel Extraction Kit购自 OMEGA) 连接于 pGEM- T Easy Vector, 转化到大肠 杆菌 JM109 (具体方法同上), 随机挑取 10个白色菌落于含有 50 μ g/mL氨苄青霉素 的 LB 液体培养基中培养, 37°C培养过夜后加甘油至终浓度 20%, -80°C保存备用。 SEQ ID NO : 5与 3 ' 端引物 AUAP进行菌液 PCR扩增, 得到 3个阳性克隆, 送英潍 捷基 (上海) 贸易有限公司测序测序,获得该基因的 cDNA的 3 ' 端。 The obtained PCR product was diluted 50-fold with double-distilled water, and then 2.0 μl was used as a template, and the second round of PCR amplification was carried out with SEQ ID NO: 5 and 3' primer AUAP, and the specific steps were as follows: 50 μ 1 PCR reaction System: 5 μ 1 10 X Ex Buffer, 3 μ 1 2. 5 mM dNTP, 2. 0 μ 1 diluted first round PCR product, 1. 0 μ 1 Ex Taq 10 μ Μ primer SEQ ID NO : 5 And AUAP each of 2. 0 μ 1, and 35 μ 1 of the double Steamed water. PCR reaction conditions: predenaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min. The second PCR product was recovered from a fragment of approximately 1600 bp (Gel Extraction Kit from OMEGA). ligated to pGEM-T Easy Vector, transformed into E. coli JM109 (specifically as above), randomly picked 10 white colonies containing 50 μ G/mL ampicillin was cultured in LB liquid medium, and cultured at 37 ° C overnight, glycerol was added to a final concentration of 20%, and stored at -80 ° C until use. SEQ ID NO: 5 and the 3' primer AUAP were used for PCR amplification of the bacterial cells, and three positive clones were obtained, which were sent to Yingji Jieji (Shanghai) Trading Co., Ltd. for sequencing and sequencing, and the 3' end of the cDNA of the gene was obtained.
根据已经获得的 GhGPKl基因片段, 设计三条特异性引物, 作为 5 ' RACE的 3 ' 端特异性引物。  Based on the GhGPK1 gene fragment that has been obtained, three specific primers were designed as the 3'-end specific primer for 5' RACE.
GhGPKl GSP3: SEQ ID NO : 6:  GhGPKl GSP3: SEQ ID NO: 6:
TATCGGCAGAGAAGCTATGC  TATCGGCAGAGAAGCTATGC
GhGPKl GSP4: SEQ ID NO : 7:  GhGPKl GSP4: SEQ ID NO: 7:
GAATAACTTCAGGAGCCATCC  GAATAACTTCAGGAGCCATCC
GhGPKl GSP5: SEQ ID NO : 8:  GhGPKl GSP5: SEQ ID NO: 8:
TTCCCTTCATTGACTTGGCTCC  TTCCCTTCATTGACTTGGCTCC
实验步骤按试剂盒说明书操作 (5 ' RACE System for Rapid Ampl ification of cDNA Ends试剂盒购自 invitrogen公司)。  The experimental procedure was performed according to the kit instructions (5 'RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen).
用 SEQ ID NO: 7与 5 ' 通用引物 AAP (试剂盒自带), 以 mRNA逆转录的 cDNA (反转录引物 SEQ ID NO : 6 ) 为模板进行第一轮 PCR扩增, 具体步骤如下: Ex Taq 购自 TAKARA, 50 μ 1 PCR反应体系: 5 μ 1 ΙΟ Χ Εχ Buffer, 3 μ 1 2· 5 mM的 dNTP, 2. 0 μ 1 mRNA反转录的 cDNA, 1. 0 μ 1 Ex Taq 10 μ M的引物 SEQ ID NO : 7和 AAP各 2. 0 μ 1, 以及 35 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变 性 30 s, 55°C退火 30 s, 72 °C 延伸 2min, 33个循环后, 72°C 延伸 10 min。 所 得的 PCR产物用双蒸水稀释 50倍后取 2. 0 μ 1作为模板, 用 SEQ ID Ν0 : 8与 3 ' 端引物 AUAP进行第二轮 PCR扩增,具体步骤如下:50 μ 1 PCR反应体系:5 μ 1 ΙΟ Χ Εχ Buffer, 3 μ 1 2. 5 mM的 dNTP, 2. 0 μ 1稀释的第一轮 PCR产物, 1. 0 μ 1 Ex Taq 10 μ Μ的引物 SEQ ID NO : 8和 AUAP各 2. 0 μ 1, 以及 35 μ 1的双蒸水。 PCR反应 条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 2 min, 33个循环后, 72°C 延伸 10 mino 第二次 PCR产物回收片段约为 800bp条带 (Gel Extraction Kit购自 OMEGA) 连接于 pGEM- T Easy Vector, 转化到 JM109 (具体方 法同上), 随机挑取 10个白色菌落于含有 50 μ g/mL氨苄青霉素的 LB 液体培养基 中培养, 37°C培养过夜后加甘油至终浓度 20%, -80°C保存备用。 SEQ ID N0 : 8与 3 ' 端引物 AUAP进行菌液 PCR扩增(反应体系及反应条件同上), 得到 4个阳性克隆, 送英潍捷基 (上海) 贸易有限公司测序测序,获得该基因的 cDNA的 5 ' 端。 The first round of PCR amplification was carried out using SEQ ID NO: 7 and 5' universal primer AAP (provided with the kit), and cDNA reverse transcription cDNA (reverse transcription primer SEQ ID NO: 6) was used as a template for the first round of PCR amplification. The specific steps are as follows: Ex Taq was purchased from TAKARA, 50 μ 1 PCR reaction system: 5 μ 1 ΙΟ Χ Εχ Buffer, 3 μ 1 2 · 5 mM dNTP, 2. 0 μ 1 mRNA reverse transcribed cDNA, 1. 0 μ 1 Ex Taq 10 μM of primers SEQ ID NO: 7 and AAP each of 2.0 μl, and 35 μl of double distilled water. PCR reaction conditions: predenaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 55 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min. The obtained PCR product was diluted 50 times with double distilled water, and then 2.0 μl was used as a template, and the second round of PCR amplification was carried out with SEQ ID Ν0:8 and 3' primer AUAP, and the specific steps were as follows: 50 μ 1 PCR reaction System: 5 μ 1 ΙΟ Χ Εχ Buffer, 3 μ 1 2. 5 mM dNTP, 2. 0 μ 1 diluted first round PCR product, 1. 0 μ 1 Ex Taq 10 μ Μ primer SEQ ID NO : 8 And AUAP each of 2.0 μl, and 35 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 mino, second PCR product recovery The fragment is approximately 800 bp (Gel Extraction Kit from OMEGA) attached to pGEM-T Easy Vector, transformed to JM109 (as described above), and randomly picked 10 white colonies in LB liquid containing 50 μg/mL ampicillin The medium was cultured, cultured at 37 ° C overnight, and glycerin was added to a final concentration of 20%, and stored at -80 ° C until use. SEQ ID N0: 8 and 3 ' The primer AUAP was used for PCR amplification (reaction system and reaction conditions as above), and four positive clones were obtained, which were sent to Yingji Jieji (Shanghai) Trading Co., Ltd. for sequencing and sequencing, and the 5' end of the cDNA of the gene was obtained.
所得的 5 ' RACE产物克隆测序后, 与 3 ' RACE产物测序结果拼接。获得 GhGPKl 全长 cDNA序列 SEQ ID NO : 19。  The obtained 5 ' RACE product was cloned and sequenced, and spliced with the 3 ' RACE product sequencing result. The full-length cDNA sequence of GhGPK1 was obtained as SEQ ID NO: 19.
SEQ ID NO : 19: SEQ ID NO: 19:
1 ACCTCCAAAT CTTTAAGCAA ACGGATCTGA AGAAAGAAGA TTTTTGTACT CTAAATGCAG 1 ACCTCCAAAT CTTTAAGCAA ACGGATCTGA AGAAAGAAGA TTTTTGTACT CTAAATGCAG
61 GAGCTTGTTG GATCGGTTCG CCGGTCCTTT GTCTTTAGGT CTTCAACCTC CAGCGACGAT61 GAGCTTGTTG GATCGGTTCG CCGGTCCTTT GTCTTTAGGT CTTCAACCTC CAGCGACGAT
121 GCCGGTGGAG GACTTGGAGG CTTTGTTGAG AAGATCGGCG CCAGCATTCG CAGATCGCGA121 GCCGGTGGAG GACTTGGAGG CTTTGTTGAG AAGATCGGCG CCAGCATTCG CAGATCGCGA
181 ATCGGCTTGT TCGCTAAGCC ACCTGCTCCA CCCGCTCTTC CTTCTGTTAA GAAAAGGGAC181 ATCGGCTTGT TCGCTAAGCC ACCTGCTCCA CCCGCTCTTC CTTCTGTTAA GAAAAGGGAC
241 GCTACGATCC GGTGGCGGAA GGGCGAGTTG ATTGGTTGTG GCGCCTTTGG TCGGGTTTAC241 GCTACGATCC GGTGGCGGAA GGGCGAGTTG ATTGGTTGTG GCGCCTTTGG TCGGGTTTAC
301 ATGGGGATGA ATCTTGACTC CGGCGAGTTA CTAGCTGTTA AACAGGTTTT GATAGCGGCA301 ATGGGGATGA ATCTTGACTC CGGCGAGTTA CTAGCTGTTA AACAGGTTTT GATAGCGGCA
361 AATGCTTCAA AGGAGAAAAC ACAGGCTCAT ATTAGAGAGC TCGAAGAAGA AGTGAAGCTT361 AATGCTTCAA AGGAGAAAAC ACAGGCTCAT ATTAGAGAGC TCGAAGAAGA AGTGAAGCTT
421 CTACAGAATC TGTCACATCC AAACATTGTT AGATATTTGG GCACCGCAAG AGAGGACGAT421 CTACAGAATC TGTCACATCC AAACATTGTT AGATATTTGG GCACCGCAAG AGAGGACGAT
481 TCGTTGAATA TTCTATTGGA GTTTGTACCA GGTGGATCCA TTTCCTCACT TTTGGGGAAG481 TCGTTGAATA TTCTATTGGA GTTTGTACCA GGTGGATCCA TTTCCTCACT TTTGGGGAAG
541 TTTGGATCTT TCCCCGAATC TGTTATAAGA ATGTACACTA AACAACTTTT GTTGGGACTG541 TTTGGATCTT TCCCCGAATC TGTTATAAGA ATGTACACTA AACAACTTTT GTTGGGACTG
601 GAATATCTTC ACAAAAATAG AATCGTGCAT AG AG AC AT C A AGGGAGCAAA CATTCTTGTG601 GAATATCTTC ACAAAAATAG AATCGTGCAT AG AG AC AT C A AGGGAGCAAA CATTCTTGTG
661 GATAACAAGG GTTGTATCAA ACTTGCAGAC TTTGGTGCAT CCAAAAAAGT TGTCGAGTTG661 GATAACAAGG GTTGTATCAA ACTTGCAGAC TTTGGTGCAT CCAAAAAAGT TGTCGAGTTG
721 GCTACAATAA ATGGAGCCAA GTCAATGAAG GGAACTCCTT ATTGGATGGC TCCTGAAGTT721 GCTACAATAA ATGGAGCCAA GTCAATGAAG GGAACTCCTT ATTGGATGGC TCCTGAAGTT
781 ATTCTCCAAA CTGGGCATAG CTTCTCTGCC GATATTTGGA GTGTTGGCTG TACTGTGATT781 ATTCTCCAAA CTGGGCATAG CTTCTCTGCC GATATTTGGA GTGTTGGCTG TACTGTGATT
841 GAGATGGCTA CTGGAAAGCC CCCTTGGAGC CAACAGTATC AGGAGGTTGC TGCTCTCTTT841 GAGATGGCTA CTGGAAAGCC CCCTTGGAGC CAACAGTATC AGGAGGTTGC TGCTCTCTTT
901 CATATTGGGA CAACTAAATC TCATCCACCC ATCCCTGAGC ATCTCTCCCC TGAGGCTAAA901 CATATTGGGA CAACTAAATC TCATCCACCC ATCCCTGAGC ATCTCTCCCC TGAGGCTAAA
961 GACCTTTTGT TAAAATGCCT ACAGAAGGAA CCAGGACTGA GACCTAGTGC ATCAGACTTG961 GACCTTTTGT TAAAATGCCT ACAGAAGGAA CCAGGACTGA GACCTAGTGC ATCAGACTTG
1021 CTTCAGCACC CTTTTGTCAC TGGGGACTAT CAGGAACCTC ATGCGGTGCT TCGTAGATCA1021 CTTCAGCACC CTTTTGTCAC TGGGGACTAT CAGGAACCTC ATGCGGTGCT TCGTAGATCA
1081 ATTAGGGAAC CTGAAAATCT GGAGATGGCA TCTGGGGTGA ACCTGAGAAG CTCAATAAAT1081 ATTAGGGAAC CTGAAAATCT GGAGATGGCA TCTGGGGTGA ACCTGAGAAG CTCAATAAAT
1141 TCGGAGATCA GGTCAACCTG CACGGGTTTA AAGGACGTTT GTGAAATGGG TAGTGTGAGT1141 TCGGAGATCA GGTCAACCTG CACGGGTTTA AAGGACGTTT GTGAAATGGG TAGTGTGAGT
1201 TGCTCTACAG CATTTCTTGG GAAATTCTCA GAACCAGGAG CCTATTGGAG GGGAAGCAAT1201 TGCTCTACAG CATTTCTTGG GAAATTCTCA GAACCAGGAG CCTATTGGAG GGGAAGCAAT
1261 TGTGACAATA GCATGTGTGA G AT AG AT G AC AAAGATGATC TAGAATTTAA TTATTCTGTA1261 TGTGACAATA GCATGTGTGA G AT AG AT G AC AAAGATGATC TAGAATTTAA TTATTCTGTA
1321 AAGTTCTCCT CTGTTTTATC ATCTGCTGAC TTGAATAAAA GTTTCAATCC CATGTGTGAA1321 AAGTTCTCCT CTGTTTTATC ATCTGCTGAC TTGAATAAAA GTTTCAATCC CATGTGTGAA
1381 CCCACTGAAG ACTGGCCACC CAAATTAGAT CAAAGTTCTG AGCTAAGCCG AAGTGGAGTA1381 CCCACTGAAG ACTGGCCACC CAAATTAGAT CAAAGTTCTG AGCTAAGCCG AAGTGGAGTA
1441 AACTTGTCTT TGGATGAAAC AATGGAAGCT GCTAGCACTC CTGGAATGTC TGGTAAGGAG1441 AACTTGTCTT TGGATGAAAC AATGGAAGCT GCTAGCACTC CTGGAATGTC TGGTAAGGAG
1501 GAGAATGGCT TCACTTTTCT CTGCGGACCT CCAACAGGTG AT GAT GAT G A AGAAGTTACA1501 GAGAATGGCT TCACTTTTCT CTGCGGACCT CCAACAGGTG AT GAT GAT G A AGAAGTTACA
1561 GAGTCAAAAA TTAGAGCCTT CCTGGATGAA AAGGCTCTGG AACTGAAGAA GCTGCAATCT 1621 CCTCTGTATG AACAGTTCTA CAACACATTG AATGGTAGTC TTCCACCTTC TGTTGGAACT 1681 GCAAATGGTG AAAATATTTT GAGCTTACCT CCTAAAAGTA GGTCACCTAA GTGGCTGCCT 1741 AGCAGAAGAC TCTCAGCAGT TGCTGATGCT GCCAACATGG TTAGCTCAAA GAGTCGTATG 1801 AATCATTTGT CAAATACTGC AGTTGTTCAT GACCGGACTT TACAAGAAAT TCAGCCACCG 1861 TCTGTTGAGG AATGGAAAGG GCAGGATATA ATTAGTCCGA GCATGAGCTT TTCTGAGAGA 1921 CAAAGGAGAT GGAAGGAAGA GCTTGACCAA GAGCTTGAGA GAAAGCGAGA GATGCTGCGG 1981 AAGACATCAT CTCCAAAGGA TAAGTTTCTA TTTGGACAAA GAGAACAAAT ACGGTCTCCA 2041 TTTCCTGGCA AGTAAATGTA GTATCCAACT TTACCTCTTT TGATGTTCCA TTGGGACTGT 2101 TCATTTCTGT ATTCTATTTT TGGTGAGAAT GGTGCCCAAT AATGTTACTC GGGCTTTATT 2161 TATGAGTGTC AGATACGAAT ATGTATTTGA TATGAGTATA TTTAATTTTT TTTCTTTTTT 2221 TTTTTTGCTT GTATAAAGTT CTTTCATATT TGTGGAAGAT ATTTGGGAGA GCCAAAAAAA 2281 AAAAAAAAAA AAA 根据 GhGPKl全长 cDNA序列设计一对引物如下: 1561 GAGTCAAAAA TTAGAGCCTT CCTGGATGAA AAGGCTCTGG AACTGAAGAA GCTGCAATCT 1621 CCTCTGTATG AACAGTTCTA CAACACATTG AATGGTAGTC TTCCACCTTC TGTTGGAACT 1681 GCAAATGGTG AAAATATTTT GAGCTTACCT CCTAAAAGTA GGTCACCTAA GTGGCTGCCT 1741 AGCAGAAGAC TCTCAGCAGT TGCTGATGCT GCCAACATGG TTAGCTCAAA GAGTCGTATG 1801 AATCATTTGT CAAATACTGC AGTTGTTCAT GACCGGACTT TACAAGAAAT TCAGCCACCG 1861 TCTGTTGAGG AATGGAAAGG GCAGGATATA ATTAGTCCGA GCATGAGCTT TTCTGAGAGA 1921 CAAAGGAGAT GGAAGGAAGA GCTTGACCAA GAGCTTGAGA GAAAGCGAGA GATGCTGCGG 1981 AAGACATCAT CTCCAAAGGA TAAGTTTCTA TTTGGACAAA GAGAACAAAT ACGGTCTCCA 2041 TTTCCTGGCA AGTAAATGTA GTATCCAACT TTACCTCTTT TGATGTTCCA TTGGGACTGT 2101 TCATTTCTGT ATTCTATTTT TGGTGAGAAT GGTGCCCAAT AATGTTACTC GGGCTTTATT 2161 TATGAGTGTC AGATACGAAT ATGTATTTGA TATGAGTATA TTTAATTTTT TTTCTTTTTT 2221 TTTTTTGCTT GTATAAAGTT CTTTCATATT TGTGGAAGAT ATTTGGGAGA GCCAAAAAAA 2281 AAAAAAAAAA AAA designed according GhGPKl full length cDNA a pair of primers as follows:
GhGPKF: SEQ ID NO : 9:  GhGPKF: SEQ ID NO: 9:
ATGCAGGAGCTTGTTGGATCGG  ATGCAGGAGCTTGTTGGATCGG
GhGPKR: SEQ ID NO : 10:  GhGPKR: SEQ ID NO: 10:
TTACTTGCCA GGAAATGGAG ACCG  TTACTTGCCA GGAAATGGAG ACCG
通过 SEQ ID NO : 9和 SEQ ID NO : 10来克隆 GhGPKl全长。  The full length of GhGPK1 was cloned by SEQ ID NO: 9 and SEQ ID NO: 10.
采用 TaKaRa的 PrimeSTAR HS DNA聚合酶, 以棉花的 cDNA为模板进行 PCR反 应。 50 μ 1 PCR反应体系: 10 μ 1 5 X PS Buffer, 3 μ 1 2. 5 mM的 dNTP, 2. 0 μ 1 cDNA, 1. 0 μ 1 PrimeSTAR、 10 μ Μ的引物 SEQ ID NO : 9和 SEQ ID NO : 10各 2· 0 μ 1, 以及 30 μ ΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72°C 延伸 2min, 33个循环后, 72°C 延伸 10 min。  PCR reaction was carried out using TaKaRa's PrimeSTAR HS DNA polymerase and cotton cDNA as a template. 50 μ 1 PCR reaction system: 10 μ 1 5 X PS Buffer, 3 μ 1 2. 5 mM dNTP, 2. 0 μ 1 cDNA, 1. 0 μ 1 PrimeSTAR, 10 μ Μ primer SEQ ID NO: 9 and SEQ ID NO: 10 each of 2·0 μ 1, and 30 μΐ of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min.
PCR扩增产物加 A尾: PCR产物加 2. 5倍的无水乙醇, _20°C放置 10分钟, 离 心, 去上清, 晾干, 用 21 μ ΐ双蒸水溶解。 加入 2. 5 μ ΐ 10 X Ex Buffer, 0. 5 μ 1 5 mM的 dATP , 2. 5 μ ΐ ΙΟ Χ Εχ Taq0 反应条件: 70°C反应 30分钟。 将得到约 1900 bp的 DNA片段回收(Omega回收试剂盒),连接至 pGEM T-easy载体上,转化 JM109 (方 法同上), 随机挑取 10个白色菌落于含有 50 g/mL氨苄青霉素的 LB 液体培养基 中培养, 37°C培养过夜后加甘油至终浓度 20%, _80°C保存备用。 SEQ ID NO : 9与 SEQ ID NO : 10进行菌液 PCR扩增 (反应体系及反应条件同上) , 得到 4个阳性克 隆,送至英潍捷基 (上海) 贸易有限公司测序,序列为 SEQ ID NO : 2。 GPKl蛋白的氨基酸序列: SEQ ID NO: 1PCR amplification product plus A tail: PCR product plus 2.5 times absolute ethanol, _20 ° C for 10 minutes, centrifuge, remove the supernatant, air dry, dissolved in 21 μ ΐ double distilled water. Add 2. 5 μ ΐ 10 X Ex Buffer, 0. 5 μ 1 5 mM dATP, 2. 5 μ ΐ ΙΟ Χ Εχ Taq 0 Reaction conditions: 70 ° C reaction for 30 minutes. A DNA fragment of about 1900 bp was recovered (Omega recovery kit), ligated into pGEM T-easy vector, transformed into JM109 (method as above), and 10 white colonies were randomly picked up in LB liquid containing 50 g/mL ampicillin. The medium was cultured, cultured at 37 ° C overnight, and glycerin was added to a final concentration of 20%, and stored at _80 ° C for use. SEQ ID NO: 9 and SEQ ID NO: 10 were subjected to bacterial cell PCR amplification (reaction system and reaction conditions are the same as above), and 4 positive clones were obtained, which were sent to Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing, and the sequence was SEQ ID. NO : 2. Amino acid sequence of GPK1 protein: SEQ ID NO: 1
1 MQELVGSVRR SFVFRSSTSS1 MQELVGSVRR SFVFRSSTSS
21 DDAGGGLGGF VEKIGASIRR21 DDAGGGLGGF VEKIGASIRR
41 SRIGLFAKPP APPALPSVKK41 SRIGLFAKPP APPALPSVKK
61 RDATIRWRKG ELIGCGAFGR61 RDATIRWRKG ELIGCGAFGR
81 VYMGMNLDSG ELLAVKGVL工81 VYMGMNLDSG ELLAVKGVL
101 AANASKEKTQ AHIRELEEEV101 AANASKEKTQ AHIRELEEEV
121 KLLQNLSHPN 工 VRYLGTARE121 KLLQNLSHPN VRYLGTARE
141 DDSLNILLEF VPGGSISSLL141 DDSLNILLEF VPGGSISSLL
161 GKFGSFPESV 工 RMYTKGLLL161 GKFGSFPESV work RMYTKGLLL
181 GLEYLHKNRI VHRDIKGANI181 GLEYLHKNRI VHRDIKGANI
201 lA/DNKGCIKL ADFGASKKW201 lA/DNKGCIKL ADFGASKKW
221 ELATINGAKS MKGTPYWMAP221 ELATINGAKS MKGTPYWMAP
241 EVILQTGHSF SADIWSVGCT241 EVILQTGHSF SADIWSVGCT
261 VIEMATGKPP WSQQYQEVAA261 VIEMATGKPP WSQQYQEVAA
281 LFHIGTTKSH PPIPEHLSPE281 LFHIGTTKSH PPIPEHLSPE
301 AKDLLLKCLQ KEPGLRPSAS301 AKDLLLKCLQ KEPGLRPSAS
321 DLLQHPFVTG DYQEPHAVLR321 DLLQHPFVTG DYQEPHAVLR
341 RSIREPENLE MASGVNLRSS341 RSIREPENLE MASGVNLRSS
361 工 NSEIRSTCT GLKDVCEMGS361 NSEIRSTCT GLKDVCEMGS
381 VSCSTAFLGK FSEPGAYWRG381 VSCSTAFLGK FSEPGAYWRG
401 SNCDNSMCEI DDKDDLEFNY401 SNCDNSMCEI DDKDDLEFNY
421 SVKFSSVLSS ADLNKSFNPM421 SVKFSSVLSS ADLNKSFNPM
441 CEPTEDWPPK LDQSSELSRS441 CEPTEDWPPK LDQSSELSRS
461 GVNLSLDETM EAASTPGMSG461 GVNLSLDETM EAASTPGMSG
481 KEENGFTFLC GPPTGDDDEE481 KEENGFTFLC GPPTGDDDEE
501 VTESKIRAFL DEKALELKKL501 VTESKIRAFL DEKALELKKL
521 QSPLYEQFYN TLNGSLPPSV521 QSPLYEQFYN TLNGSLPPSV
541 GTANGEN工: LS LPPKSRSPKW541 GTANGEN worker: LS LPPKSRSPKW
561 LPSRRLSAVA DAANMVSSKS561 LPSRRLSAVA DAANMVSSKS
581 RMNHLSNTAV VHDRTLQEIQ581 RMNHLSNTAV VHDRTLQEIQ
601 PPSVEEWKGQ DIISPSMSFS 621 ERQRRWKEEL DQELERKREM 601 PPSVEEWKGQ DIISPSMSFS 621 ERQRRWKEEL DQELERKREM
641 LRKTS SPKDK F LFGQREQIR  641 LRKTS SPKDK F LFGQREQIR
661 SPFPGK*  661 SPFPGK*
GhGPKl编码基因的核苷酸序列: SEQ ID NO: 2  Nucleotide sequence of the GhGPK1 encoding gene: SEQ ID NO: 2
1 ATGCAGGAGC TTGTTGGATC GGTTCGCCGG TCCTTTGTCT TTAGGTCTTC AACCTCCAGC 1 ATGCAGGAGC TTGTTGGATC GGTTCGCCGG TCCTTTGTCT TTAGGTCTTC AACCTCCAGC
61 GACGATGCCG GTGGAGGACT TGGAGGCTTT GTTGAGAAGA TCGGCGCCAG CATTCGCAGA61 GACGATGCCG GTGGAGGACT TGGAGGCTTT GTTGAGAAGA TCGGCGCCAG CATTCGCAGA
121 TCGCGAATCG GCTTGTTCGC TAAGCCACCT GCTCCACCCG CTCTTCCTTC TGTTAAGAAA121 TCGCGAATCG GCTTGTTCGC TAAGCCACCT GCTCCACCCG CTCTTCCTTC TGTTAAGAAA
181 AGGGACGCTA CGATCCGGTG GCGGAAGGGC GAGTTGATTG GTTGTGGCGC CTTTGGTCGG181 AGGGACGCTA CGATCCGGTG GCGGAAGGGC GAGTTGATTG GTTGTGGCGC CTTTGGTCGG
241 GTTTACATGG GGATGAATCT TGACTCCGGC GAG TT AC TAG CTGTTAAACA GGTTTTGATA241 GTTTACATGG GGATGAATCT TGACTCCGGC GAG TT AC TAG CTGTTAAACA GGTTTTGATA
301 GCGGCAAATG CTTCAAAGGA GAAAACACAG GCTCATATTA GAGAGCTCGA AGAAGAAGTG301 GCGGCAAATG CTTCAAAGGA GAAAACACAG GCTCATATTA GAGAGCTCGA AGAAGAAGTG
361 AAGCTTCTAC AGAATCTGTC ACATCCAAAC ATTGTTAGAT ATTTGGGCAC CGCAAGAGAG361 AAGCTTCTAC AGAATCTGTC ACATCCAAAC ATTGTTAGAT ATTTGGGCAC CGCAAGAGAG
421 GACGATTCGT TGAATATTCT ATTGGAGTTT GTACCAGGTG GATCCATTTC CTCACTTTTG421 GACGATTCGT TGAATATTCT ATTGGAGTTT GTACCAGGTG GATCCATTTC CTCACTTTTG
481 GGGAAGTTTG GATCTTTCCC CGAATCTGTT ATAAGAATGT ACACTAAACA ACTTTTGTTG481 GGGAAGTTTG GATCTTTCCC CGAATCTGTT ATAAGAATGT ACACTAAACA ACTTTTGTTG
541 GGACTGGAAT ATCTTCACAA AAATAGAATC GTGCATAGAG ACATCAAGGG AGCAAACATT541 GGACTGGAAT ATCTTCACAA AAATAGAATC GTGCATAGAG ACATCAAGGG AGCAAACATT
601 CTTGTGGATA ACAAGGGTTG TATCAAACTT GCAGACTTTG GTGCATCCAA AAAAGTTGTC601 CTTGTGGATA ACAAGGGTTG TATCAAACTT GCAGACTTTG GTGCATCCAA AAAAGTTGTC
661 GAGTTGGCTA CAATAAATGG AGCCAAGTCA ATGAAGGGAA CTCCTTATTG GATGGCTCCT661 GAGTTGGCTA CAATAAATGG AGCCAAGTCA ATGAAGGGAA CTCCTTATTG GATGGCTCCT
721 GAAGTTATTC TCCAAACTGG GCATAGCTTC TCTGCCGATA TTTGGAGTGT TGGCTGTACT721 GAAGTTATTC TCCAAACTGG GCATAGCTTC TCTGCCGATA TTTGGAGTGT TGGCTGTACT
781 GTGATTGAGA TGGCTACTGG AAAGCCCCCT TGGAGCCAAC AGTATCAGGA GGTTGCTGCT781 GTGATTGAGA TGGCTACTGG AAAGCCCCCT TGGAGCCAAC AGTATCAGGA GGTTGCTGCT
841 CTCTTTCATA TTGGGACAAC TAAATCTCAT CCACCCATCC CTGAGCATCT CTCCCCTGAG841 CTCTTTCATA TTGGGACAAC TAAATCTCAT CCACCCATCC CTGAGCATCT CTCCCCTGAG
901 GCTAAAGACC TTTTGTTAAA ATGCCTACAG AAGGAACCAG GACTGAGACC TAGTGCATCA901 GCTAAAGACC TTTTGTTAAA ATGCCTACAG AAGGAACCAG GACTGAGACC TAGTGCATCA
961 GACTTGCTTC AGCACCCTTT TGTCACTGGG GACTATCAGG AACCTCATGC GGTGCTTCGT961 GACTTGCTTC AGCACCCTTT TGTCACTGGG GACTATCAGG AACCTCATGC GGTGCTTCGT
1021 AGATCAATTA GGGAACCTGA AAATCTGGAG ATGGCATCTG GGGTGAACCT GAGAAGCTCA1021 AGATCAATTA GGGAACCTGA AAATCTGGAG ATGGCATCTG GGGTGAACCT GAGAAGCTCA
1081 ATAAATTCGG AGATCAGGTC AACCTGCACG GGTTTAAAGG ACGTTTGTGA AATGGGTAGT1081 ATAAATTCGG AGATCAGGTC AACCTGCACG GGTTTAAAGG ACGTTTGTGA AATGGGTAGT
1141 GTGAGTTGCT CTACAGCATT TCTTGGGAAA TTCTCAGAAC CAGGAGCCTA TTGGAGGGGA1141 GTGAGTTGCT CTACAGCATT TCTTGGGAAA TTCTCAGAAC CAGGAGCCTA TTGGAGGGGA
1201 AGCAATTGTG ACAATAGCAT GTGTGAGATA GATGACAAAG AT GAT C TAG A ATTTAATTAT1201 AGCAATTGTG ACAATAGCAT GTGTGAGATA GATGACAAAG AT GAT C TAG A ATTTAATTAT
1261 TCTGTAAAGT TCTCCTCTGT TTTATCATCT GCTGACTTGA ATAAAAGTTT CAATCCCATG1261 TCTGTAAAGT TCTCCTCTGT TTTATCATCT GCTGACTTGA ATAAAAGTTT CAATCCCATG
1321 TGTGAACCCA CTGAAGACTG GCCACCCAAA TTAGATCAAA GTTCTGAGCT AAGCCGAAGT1321 TGTGAACCCA CTGAAGACTG GCCACCCAAA TTAGATCAAA GTTCTGAGCT AAGCCGAAGT
1381 GGAGTAAACT TGTCTTTGGA TGAAACAATG GAAGCTGCTA GCACTCCTGG AATGTCTGGT1381 GGAGTAAACT TGTCTTTGGA TGAAACAATG GAAGCTGCTA GCACTCCTGG AATGTCTGGT
1441 AAGGAGGAGA ATGGCTTCAC TTTTCTCTGC GGACCTCCAA CAGGTGATGA TGATGAAGAA1441 AAGGAGGAGA ATGGCTTCAC TTTTCTCTGC GGACCTCCAA CAGGTGATGA TGATGAAGAA
1501 GTTACAGAGT CAAAAATTAG AGCCTTCCTG GATGAAAAGG CTCTGGAACT GAAGAAGCTG1501 GTTACAGAGT CAAAAATTAG AGCCTTCCTG GATGAAAAGG CTCTGGAACT GAAGAAGCTG
1561 CAATCTCCTC TGTATGAACA GTTCTACAAC ACATTGAATG GTAGTCTTCC ACCTTCTGTT1561 CAATCTCCTC TGTATGAACA GTTCTACAAC ACATTGAATG GTAGTCTTCC ACCTTCTGTT
1621 GGAACTGCAA ATGGTGAAAA TATTTTGAGC TTACCTCCTA AAAGTAGGTC ACCTAAGTGG 1681 CTGCCTAGCA GAAGACTCTC AGCAGTTGCT GATGCTGCCA ACATGGTTAG CTCAAAGAGT1621 GGAACTGCAA ATGGTGAAAA TATTTTGAGC TTACCTCCTA AAAGTAGGTC ACCTAAGTGG 1681 CTGCCTAGCA GAAGACTCTC AGCAGTTGCT GATGCTGCCA ACATGGTTAG CTCAAAGAGT
1741 CGTATGAATC ATTTGTCAAA TACTGCAGTT GTTCATGACC GGACTTTACA AGAAATTCAG1741 CGTATGAATC ATTTGTCAAA TACTGCAGTT GTTCATGACC GGACTTTACA AGAAATTCAG
1801 CCACCGTCTG TTGAGGAATG GAAAGGGCAG GATATAATTA GTCCGAGCAT GAGCTTTTCT1801 CCACCGTCTG TTGAGGAATG GAAAGGGCAG GATATAATTA GTCCGAGCAT GAGCTTTTCT
1861 GAGAGACAAA GGAGATGGAA GGAAGAGCTT GACCAAGAGC TTGAGAGAAA GCGAGAGATG1861 GAGAGACAAA GGAGATGGAA GGAAGAGCTT GACCAAGAGC TTGAGAGAAA GCGAGAGATG
1921 CTGCGGAAGA CATCATCTCC AAAGGATAAG TTTCTATTTG GACAAAGAGA ACAAATACGG1921 CTGCGGAAGA CATCATCTCC AAAGGATAAG TTTCTATTTG GACAAAGAGA ACAAATACGG
1981 TCTCCATTTC CTGGCAAGTA A 实施例 3 GhGPKl基因植物表达载体构建 1981 TCTCCATTTC CTGGCAAGTA A Example 3 Construction of GhGPK1 gene expression vector
选择植物双元表达载体 PCAMBIA2300 (购自北京鼎国昌盛生物技术有限责任公 司)作为植物表达载体, 用 Pnos启动子替换 ΝΡΤΠ基因含双增强子的 35S启动子, 以降低 ΝΡΤΠ蛋白在植物中的表达。 选择诱导型启动子 rd29A及 Tnos作为 GhGPKl 基因的启动子和终止子。  The plant binary expression vector PCAMBIA2300 (purchased from Beijing Dingguo Changsheng Biotechnology Co., Ltd.) was selected as the plant expression vector, and the 35S promoter containing the double enhancer of the ΝΡΤΠ gene was replaced with the Pnos promoter to reduce the expression of prion protein in plants. . The inducible promoters rd29A and Tnos were selected as promoters and terminators of the GhGPK1 gene.
用引物 SEQ ID NO: 11和 SEQ ID NO: 12以植物表达载体 PBI 121 (购自北京华 夏远洋科技有限公司)为模板扩增 Pnos, 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶。 50 lPCR反应体系: 10 μ 15XPSBuffer, 3 μ 12· 5 mM的 dNTP, 1· 0 μ 1 PBI121, 1.0 μ 1 PrimeSTAR, 10 μΜ的引物 SEQ ID NO: 11和 SEQ ID NO: 12各 2.0 μ 1, 以及 31 μΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变性 30 s, 56 °C 退火 30 s, 72 °C 延伸 30s, 33个循环后, 72°C 延伸 10min。 通过 EcoRI、 Bglll 酶切连接到 PCAMBIA2300 (promega, T4 连接酶盒)获得 pCAMBIA2300_l。  Pnos were amplified using the plant expression vector PBI 121 (purchased from Beijing Huaxia Ocean Technology Co., Ltd.) using primers SEQ ID NO: 11 and SEQ ID NO: 12, using TaKaRa's PrimeSTAR HS DNA polymerase. 50 l PCR reaction system: 10 μ 15 XPSBuffer, 3 μ 12· 5 mM dNTP, 1· 0 μ 1 PBI121, 1.0 μ 1 PrimeSTAR, 10 μΜ primers SEQ ID NO: 11 and SEQ ID NO: 12 each 2.0 μ 1, And 31 μΐ of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 56 °C for 30 s, extension at 72 °C for 30 s, after 33 cycles, and extension at 72 °C for 10 min. pCAMBIA2300_l was obtained by EcoRI, Bglll digestion with PCAMBIA2300 (promega, T4 ligase cassette).
SEQ ID NO: 11 :  SEQ ID NO: 11:
GCACGAATTCATACAAATGGACGAACGGAT SEQ ID NO: 12:  GCACGAATTCATACAAATGGACGAACGGAT SEQ ID NO: 12:
ATCCAGATCTAGATCCGGTGCAGATTATTTG ATCCAGATCTAGATCCGGTGCAGATTATTTG
SEQ ID NO: 13和 SEQ ID NO: 14以 PBI121为模板扩增 Tnos, 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶。 50 μ 1 PCR反应体系: 10 μ 15XPS Buffer, 3 μ 12.5 mM的 dNTP, 1.0 μ 1 PBI121, 1.0 μ 1 PrimeSTAR, 10 μΜ的引物 SEQ ID NO: 13 和 SEQ ID NO: 14各 2.0 μ 1, 以及 31 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 30 s, 33个循环后, 72°C 延 伸 10 mine 通过 Kpnl、 EcoRI酶切连接到 pCAMBIA2300-l (promega T4 连接酶盒) 获得 pCAMBIA2300-2 SEQ ID NO: 13 and SEQ ID NO: 14 amplify Tnos using PBI121 as a template, using TaKaRa's PrimeSTAR HS DNA polymerase. 50 μ 1 PCR reaction system: 10 μ 15×PS Buffer, 3 μ 12.5 mM dNTP, 1.0 μ 1 PBI121, 1.0 μ 1 PrimeSTAR, 10 μΜ primers SEQ ID NO: 13 and SEQ ID NO: 14 each 2.0 μ 1, and 31 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 30 s, after 33 cycles, extension at 72 °C for 10 min by Kpnl, EcoRI digestion Connect to pCAMBIA2300-l (promega T4 ligase cassette) to obtain pCAMBIA2300-2
SEQ ID NO: 13:  SEQ ID NO: 13:
AAG ^7¾i76GAATTTCCCCGATCGTTCAAA SEQ ID NO : 14: AAG ^73⁄4i76GAATTTCCCCGATCGTTCAAA SEQ ID NO: 14:
TCA GAA mCCAGTGAATTCCCGATCTAGTA  TCA GAA mCCAGTGAATTCCCGATCTAGTA
SEQ ID NO : 15 和 SEQ ID NO : 16 以拟南芥 (哥伦比亚型 , 购自 www. arabidopsis. org) DNA为模板扩增拟南芥 rd29A启动子 (参考 Zeng J. , et L. 2002, Preparation of total DNA from "recalcit rant plant taxa" , Acta Bot. Sin. , 44 (6): 694-697 中的方法提取拟南芥 DNA)。采用 TaKaRa的 PrimeSTAR HS DNA 聚合酶。 50 μ 1 PCR反应体系: 10 μ 1 5 X PS Buffer, 3 μ 1 2. 5 mM的 dNTP, 1. 0 μ 1 拟南芥 DNA, 1. 0 μ 1 PrimeSTAR, 10 μ Μ的引物 SEQ ID NO : 15和 SEQ ID NO : 16各 2. 0 μ 1, 以及 31 μ ΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变 性 30 s, 58°C退火 30 s, 72 °C 延伸 30 s, 33个循环后, 72°C 延伸 10 min。 通 过 HindIII、 Sail酶切连接到(连接方法同上) pCAMBIA2300-2获得 pCAMBIA2300_3 SEQ ID NO: 15 and SEQ ID NO: 16 Amplification of the Arabidopsis thaliana rd29A promoter using Arabidopsis thaliana (Columbia type, available from www. arabidopsis.org) DNA as a template (see Zeng J., et L. 2002, Preparation) Of total DNA from "recalcit rant plant taxa", Acta Bot. Sin., 44 (6): Method 694-697 for extracting Arabidopsis DNA). PrimeSTAR HS DNA polymerase from TaKaRa was used. 50 μ 1 PCR reaction system: 10 μ 1 5 X PS Buffer, 3 μ 1 2. 5 mM dNTP, 1. 0 μ 1 Arabidopsis DNA, 1. 0 μ 1 PrimeSTAR, 10 μ Μ primer SEQ ID NO : 15 and SEQ ID NO: 16 each of 2.0 μl, and 31 μΐ of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 30 s, after 33 cycles, extension at 72 °C for 10 min. By HindIII, Sail digestion and ligation (connection method is the same as above) pCAMBIA2300-2 obtained pCAMBIA2300_3
SEQ ID NO : 15: SEQ ID NO: 15:
ACTAAGCTTCCTTCTTGACATCATTCAATTTTA ACTAAGCTTCCTTCTTGACATCATTCAATTTTA
SEQ ID NO : 16: SEQ ID NO : 16:
TGAi7 O¾CTCCAAAGATTTTTTTCTTTCCAATAG  TGAi7 O3⁄4CTCCAAAGATTTTTTTCTTTCCAATAG
SEQ ID NO : 17禾口 SEQ ID NO : 18扩增 GhGPKl (模板是实施例 2所获得 GhGPKl ), 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶。50 μ ΐ PCR反应体系:10 μ 1 5 X PS Buffer, 3 μ 1 2. 5 mM的 dNTP, 1. 0 μ 1 GhGPKl -pGEM, 1. 0 μ 1 PrimeSTAR、 10 μ Μ的引 物 SEQ ID NO : 17和 SEQ ID NO : 18各 2. 0 μ 1, 以及 31 μ 1的双蒸水。 PCR反应 条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 2min, 33 个循环后, 72 °C 延伸 10 min。 通过 Kpnl、 Sail 酶切连接到 (连接方法同上) PCAMBIA2300-3, 获得植物表达载体 rd29A_ GhGPKl_2300。  SEQ ID NO: 17 and SEQ ID NO: 18 Amplified GhGPK1 (template is GhGPK1 obtained in Example 2), using TaKaRa's PrimeSTAR HS DNA polymerase. 50 μ ΐ PCR reaction system: 10 μ 1 5 X PS Buffer, 3 μ 1 2. 5 mM dNTP, 1. 0 μ 1 GhGPKl -pGEM, 1. 0 μ 1 PrimeSTAR, 10 μ Μ primer SEQ ID NO : 17 and SEQ ID NO: 18 each of 2.0 μl, and 31 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, extension at 72 °C for 10 min. The plant expression vector rd29A_GhGPKl_2300 was obtained by cleavage of Kpnl and Sail (connection method as above) PCAMBIA2300-3.
SEQ ID NO : 17:  SEQ ID NO: 17:
TGA i^nATGCAGGAGCTTGTTGGATCGG  TGA i^nATGCAGGAGCTTGTTGGATCGG
SEQ ID NO : 18:  SEQ ID NO: 18:
AAG i O¾CTTACTTGCCAGGAAATGGAGACCG 实施例 4 rd29A- GhGPKl-2300表达载体转化农杆菌  AAG i O3⁄4CTTACTTGCCAGGAAATGGAGACCG Example 4 rd29A-GhGPKl-2300 expression vector for transformation of Agrobacterium
农杆菌 LBA4404 (购自 Biovector Science Lab, Inc) 感受态制备: 提前 1-2 天将农杆菌 LBA4404在含 50 μ g/ml利福平和 50 μ g/ml链霉素的 LB固体培养基 上划单斑接种, 28°C培养 1至 2天。 挑取单菌落接种于 5 ml含 50 μ g/ml利福平 和 50 μ g/ml链霉素的 LB液体培养基中,28°C下摇动培养过夜(约 12-16 h)至 0D600 值为 0. 4, 形成种子菌液。 取 5 ml活化后的菌液 (1 : 20的比例) 接种于 100 ml同 样浓度抗生素的 LB液体培养基中, 28°C摇动培养 2-2. 5 h至 0D6。。=0. 8。 冰浴菌液 10 min, 每隔 3 min摇匀一次, 令细菌均匀进入休眠状态。 于 4°C下 4000 g离心 10 min, 弃上清液; 加入一定量预冷 10%甘油重悬浮菌体, 4°C下 4000 g离心 10 min, 收集沉淀; 用 10%甘油重复洗 3-4次; 加入适量冰浴预冷的 10%甘油重新悬浮细菌 沉淀, 以 40 μ ΐ/管将其分装, 于 -70°C保存备用。 Agrobacterium LBA4404 (available from Biovector Science Lab, Inc) Competent preparation: Agrobacterium LBA4404 was plated on LB solid medium containing 50 μg/ml rifampicin and 50 μg/ml streptomycin 1-2 days in advance Single spot inoculation, culture at 28 ° C for 1 to 2 days. Single colonies were picked and inoculated into 5 ml of LB liquid medium containing 50 μg/ml rifampicin and 50 μg/ml streptomycin, and cultured overnight (about 12-16 h) to 0D600 at 28 °C. The value is 0.4, and a seed bacterial liquid is formed. 5小时至0D 6。 Take 5 ml of activated bacterial solution (1: 20 ratio) inoculated in 100 ml of the same concentration of antibiotics in LB liquid medium, shaking at 2 ° C. 2 h. . =0. 8. The ice bath solution was shaken for 10 min every 3 min to allow the bacteria to enter the dormant state evenly. Centrifuge at 4000 g for 10 min at 4 °C, discard the supernatant; add a certain amount of pre-cooled 10% glycerol to resuspend the cells, centrifuge at 4000 g for 10 min at 4 °C, collect the precipitate; repeat washing with 10% glycerol3- 4 times; add the appropriate amount of ice bath pre-cooled 10% glycerol to resuspend the bacterial pellet, dispense it in 40 μM/tube, and store at -70 °C for later use.
转化农杆菌: 在冰上融化感受态细胞, 往 40 μ 1 的感受态细胞中加入 1 μ 1 的质粒, 混匀后冰浴约 10 min。 将感受态和 DNA的混合物用枪转移到预冷的电击杯 中, 轻敲使悬浮液到达底部, 注意不要有气泡。 将电击杯 (购自 bio-rad) 放到电 击室的滑道上, 推动滑道将电击杯放至电击室基座电极处。 使用 0. lcm的电击杯的 时候, MicroPulser (购自 bio-rad) 的程序设置为 "Agr" , 电击一次 。 立即取出 电击杯, 加入 28°C预热的 LB培养基。 快速而轻柔的用枪将细胞打匀。 将悬浮液转 入 1. 5 ml的离心管, 28°C, 225 rpm培养 1 h。 取 100〜200 μ 1的菌液涂布与相 应的抗性筛选培养基平板上 (LB固体培养基, 含 50 μ g/ml利福平、 50 μ g/ml链 霉素、 50 μ g/ml卡那霉素), 28°C培养。 实施例 5 利用农杆菌介导的转化法获得转基因烟草  Transformation of Agrobacterium: Thaw competent cells on ice, add 1 μl of plasmid to 40 μl of competent cells, mix and ice bath for about 10 min. Transfer the mixture of competent and DNA to the pre-cooled electric shock cup with a gun and tap to bring the suspension to the bottom, taking care not to have air bubbles. Place the electric shock cup (purchased from bio-rad) on the slide of the shock chamber and push the slide to place the electric shock cup on the base electrode of the shock chamber. When using a 0. lcm electric shock cup, the program of MicroPulser (purchased from bio-rad) is set to "Agr" and the electric shock is once. Immediately remove the electric shock cup and add LB medium pre-warmed at 28 °C. Quickly and gently spread the cells with a gun. The suspension was transferred to a 1.5 ml centrifuge tube and incubated at 28 ° C, 225 rpm for 1 h. Take 100~200 μl of the bacterial solution and plate on the corresponding resistant screening medium (LB solid medium containing 50 μg/ml rifampicin, 50 μg/ml streptomycin, 50 μg/ Ml Kanamycin), cultured at 28 °C. Example 5 Obtaining Transgenic Tobacco by Agrobacterium-mediated Transformation
用 75%酒精浸泡烟草种子 (国家烟草中期库, 获取单位: 中国农科院烟草所, 库编号 I5A00660) 30 s, 用灭菌双蒸水洗两次。 再用 0. 1%升汞浸泡 8 min, 用灭菌 双蒸水洗两次, 完成表面灭菌。 将表面灭菌的烟草种子置于 MS ( 18. 78 mM KN03, 1. 25 mM KH2P04, 20. 6 mM NH4N03, 1. 5 mM MgS04, 3. 0 mM CaCl2, 50 μ M KI , 100 μ M H3BO3 , 100 M MnS04 , 30 μ M ZnS04, 1 μ M Na2Mo04, 0. 1 μ M CoCl2, 100 μ M N¾EDTA, 100 μ Μ FeS04, 7. 4 g/L琼脂, 蔗糖 30 g/L) 上于无菌条件下发芽, 制备无菌苗。 取无菌苗叶片剪成 5 mmX 5 mm 大小的叶盘, 用处于对数生长期的含表达载体 rd29A-GhGPKl-2300的农杆菌浸染叶盘 10 min, 吸干菌液, 在黑暗条件下共培养 2 天 (MS培养基)。 将叶片转到分化培养基 (MS+1 mg/L细胞分裂素 (BA) +0. 1 mg/L 萘乙酸 (麵 +50 mg/L卡那霉素 +500 mg/L头孢霉素) 上, 光照条件下培养 45天 左右, 待芽长大后切下转移到生根培养基 (MS+50 mg/L卡那霉素 +500 mg/L头孢霉 素) 中培养 30天左右, 待根系发达后将小苗转入仅加有 500 mg/L头孢霉素的 MS 培养基上进行编号保存。 To soak tobacco seeds with 75% alcohol (National Tobacco Medium Term Bank, obtained by: Institute of Tobacco, Chinese Academy of Agricultural Sciences, Library No. I5A00660) 30 s, washed twice with sterile double distilled water. Then, it was immersed in 0.1% liter of mercury for 8 min, and washed twice with sterilized double distilled water to complete surface sterilization. The surface-sterilized tobacco seeds were placed in MS ( 18.78 mM KN0 3 , 1. 25 mM KH 2 P0 4 , 20. 6 mM NH 4 N0 3 , 1.5 mM MgS0 4 , 3. 0 mM CaCl 2 , 50 μ M KI , 100 μ M H3BO3 , 100 M MnS0 4 , 30 μ M ZnS0 4 , 1 μ M Na 2 Mo0 4 , 0.1 μM CoCl 2 , 100 μ M N3⁄4EDTA, 100 μ Μ FeS0 4 , 7. 4 g/L agar, sucrose 30 g/L) was germinated under sterile conditions to prepare sterile seedlings. The leaves of the sterile seedlings were cut into 5 mm×5 mm leaf discs, and the leaf discs were inoculated with Agrobacterium containing the expression vector rd29A-GhGPKl-2300 in the logarithmic growth phase for 10 min, and the bacteria were sucked up in the dark. Incubate for 2 days (MS medium). The leaves were transferred to differentiation medium (MS+1 mg/L cytokinin (BA) + 0.1 mg/L naphthaleneacetic acid (face +50 mg/L kanamycin + 500 mg/L cephalosporin) After incubation for about 45 days under light conditions, the buds should be grown and transferred to rooting medium (MS+50 mg/L kanamycin + 500 mg/L cephalosporin) for about 30 days, until the root system is developed. The seedlings were then transferred to MS medium supplemented with 500 mg/L cephalosporin for number storage.
取获得的转基因烟草叶片, 提取 DNA (同实施例 3中拟南芥 DNA提取方法), 用 SEQ ID NO : 9: 和 SEQ ID NO : 10 ( 50 μ 1 PCR反应体系: 5 μ 1 ΙΟ Χ Εχ Buffer, 3 μ 1 2· 5 mM的 dNTP, 2. 0 μ 1 DNA, 1. 0 μ 1 Ex Taq 10 μ M的引物 SEQ ID NO : 9和 SEQ ID NO : 10各 2. 0 μ 1, 以及 35 μ 1的双蒸水。 PCR反应条件: 94°C预变 性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 2 min, 33个循环后, 72 V 延伸 10 min), PCR鉴定, 保存阳性植株进行编号 T。R1_T。R20。 实施例 6 过表达 GhGPKl转基因烟草 T1的耐旱模拟实验及功能鉴定 The obtained transgenic tobacco leaves were extracted, and DNA (the Arabidopsis thaliana DNA extraction method in Example 3) was used, and SEQ ID NO: 9: and SEQ ID NO: 10 (50 μl PCR reaction system: 5 μ 1 ΙΟ Χ Εχ Buffer, 3 μ 1 2 · 5 mM dNTP, 2. 0 μ 1 DNA, 1. 0 μ 1 Ex Taq 10 μ M primers SEQ ID NO: 9 and SEQ ID NO: 10 each 2. 0 μ 1, and 35 μ 1 double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 2 min, after 33 cycles, 72 V extension for 10 min), PCR identification, positive preservation The plant is numbered T. R1_T. R20. Example 6 Drought Tolerance Simulation Experiment and Functional Identification of GhGPK1 Transgenic Tobacco T1
灭过菌的蛭石用 1/2MS培养基浸透。 T。R1-T。R20及对照烟草种子分别播种在蛭 石上, 每盆播种 15颗种子, 25°C、 10小时光培养 /14小时暗培养循环, 每 5天浇 一次 1/2MS, 培养 25天之后, 每盆保留大小较一致的 4-5棵苗, 做干旱实验, 转基 因烟草、 对照烟草干旱 14天 (不浇水), 25°C、 10小时光培养 /14小时暗培养循环。 T1 代转基因植株 (TO代转基因植株的种子长成的植株) 的抗旱性鉴定表明, 对照 植株都萎蔫严重, 而 1\R1、 1\R3、 1\R5、 1\R8、 1\R11、 1\R13、 TJ 6七个株系共 34 棵烟草中有 22棵能够正常生长, 表现出明显的耐旱性(参见图 3, 以 1\R1、 1\R3为 例, 1 R5、 1 R8、 1 R11、 1 R13、 TJ 6的结果与 1 R1、 1 R3类似, 在此未示出)。 实施例 7 在转录水平上验证 GPK1蛋白表达  The sterilized vermiculite was soaked in 1/2 MS medium. T. R1-T. R20 and control tobacco seeds were sown on vermiculite, 15 seeds per pot, 25 ° C, 10 hours light culture / 14 hours dark culture cycle, 1/2 MS every 5 days, 25 days after culture, each pot was kept 4-5 seedlings of uniform size, drought test, transgenic tobacco, control tobacco drought for 14 days (no watering), 25 ° C, 10 hours light culture / 14 hours dark culture cycle. The drought resistance of T1 transgenic plants (plants grown from seeds of TO transgenic plants) showed that the control plants were wilting, and 1\R1, 1\R3, 1\R5, 1\R8, 1\R11, 1 Twenty-five of the 34 tobacco lines of \R13 and TJ 6 were able to grow normally and showed obvious drought tolerance (see Figure 3, taking 1\R1, 1\R3 as an example, 1 R5, 1 R8, The results of 1 R11, 1 R13, TJ 6 are similar to 1 R1, 1 R3, not shown here). Example 7 Verification of GPK1 protein expression at the transcriptional level
分别取对照烟草、不耐旱转基因烟草 T1代植株、耐旱转基因烟草 T1代植株(生 长状况良好)干旱 14天叶子 0. 05g, 用植物 RNA提取试剂盒(invitrogen)提取的 总 RNAo 用 HITACHI公司的紫外分光光度计 U- 2001测定总 RNA在 260 nm和 280 nm 的吸光度值, 计算各个 RNA浓度。 依照 invitrogen反转录试剂盒 Superscript I I I Reverse Transcriptase所示方法进行反转录 (2 μ g总 RNA作为模板, 反转录引物 SEQ ID NO : 10)。 通过 SEQ ID N0 : 9和 SEQ ID NO : 10扩增 GhGPKl , 检测 GPK1蛋白 相对表达情况。 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶, 以反转录的 cDNA为模 板进行 PCR反应。 50 μ 1 PCR反应体系: 10 μ ΐ 5 X PS Buffer, 3 μ 1 2. 5 mM的 dNTP, 2. 0 μ 1 cDNA, 1. 0 μ 1 PrimeSTAR, 10 μ Μ的引物 SEQ ID NO : 9禾卩 SEQ ID NO : 10各 2. 0 μ 1, 以及 30 μ ΐ的双蒸水。 PCR反应条件: 94°C预变性 5 min, 94 °C 变性 30 s, 58°C退火 30 s, 72 °C 延伸 lmin, 29个循环后, 72°C 延伸 10 min。 产物电泳结果如图 4所示: M为 DNA Ladder Marker (DL2000,购自深圳瑞真生物技 术有限公司), 1-5为对照烟草, 6-18为耐旱转基因烟草 T1代植株, 19-24为不耐 旱转基因烟草 T1代植株。 图中所示条带大小与 GhGPKl-1基因的大小一致。 结果表 明对照烟草没有转录 GhGPKl的 mRNA, 耐旱转基因烟草 T1代植株对 GhGPKl的转录 较强, 不耐旱转基因烟草 T1代植株没有转录或转录很弱。  Control tobacco, drought-tolerant transgenic tobacco T1 plants, drought-tolerant transgenic tobacco T1 plants (good growth) drought 14 days leaves 0. 05g, total RNAo extracted with plant RNA extraction kit (invitrogen) with HITACHI The UV spectrophotometer U-2001 measures the absorbance of total RNA at 260 nm and 280 nm and calculates the individual RNA concentrations. Reverse transcription was carried out according to the method shown by the invitrogen reverse transcription kit Superscript I I I Reverse Transcriptase (2 μg total RNA as a template, reverse transcription primer SEQ ID NO: 10). The relative expression of GPK1 protein was detected by amplifying GhGPK1 by SEQ ID NO: 9 and SEQ ID NO: 10. PCR was performed using TaKaRa's PrimeSTAR HS DNA polymerase with reverse transcribed cDNA as a template. 50 μ 1 PCR reaction system: 10 μ ΐ 5 X PS Buffer, 3 μ 1 2. 5 mM dNTP, 2. 0 μ 1 cDNA, 1. 0 μ 1 PrimeSTAR, 10 μ Μ primer SEQ ID NO : 9卩 SEQ ID NO: 10 each of 2.0 μl, and 30 μΐ of double distilled water. PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min, after 29 cycles, extension at 72 °C for 10 min. The electrophoresis results of the product are shown in Figure 4: M is DNA Ladder Marker (DL2000, purchased from Shenzhen Ruizhen Biotechnology Co., Ltd.), 1-5 is control tobacco, and 6-18 is drought-tolerant transgenic tobacco T1 plant, 19-24 It is a T1 generation plant that is not tolerant to transgenic tobacco. The size of the band shown in the figure is consistent with the size of the GhGPKl-1 gene. The results showed that the control tobacco did not transcribe GhGPK1 mRNA, and the T1 generation of drought-tolerant transgenic tobacco had stronger transcription of GhGPK1, and the T1 generation of the drought-tolerant transgenic tobacco had no transcription or transcription.

Claims

权 利 要 求 书 Claim
1. 棉花的一个蛋白激酶编码基因, 其序列为 SEQ ID NO: 2。 A cotton protein encoding gene having a sequence of SEQ ID NO: 2.
2. 一种重组表达载体,其含有权利要求 1所述基因的核苷酸序列并且所述核苷 酸序列与所述表达载体的表达控制序列可操作地连接。  2. A recombinant expression vector comprising the nucleotide sequence of the gene of claim 1 and operably linked to the expression control sequence of the expression vector.
3. 权利要求 2所述的载体, 其为附图 2所示的 rd29A-GhGPKl-2300载体。 3. The vector of claim 2 which is the rd29A-GhGPK1-2300 carrier shown in Figure 2.
4. 一种重组细胞,其含有权利要求 1所述基因的核苷酸序列或者权利要求 2或 3所述的重组表达载体; 优选地, 所述重组细胞为重组农杆菌细胞。 A recombinant cell comprising the nucleotide sequence of the gene of claim 1 or the recombinant expression vector of claim 2 or 3; preferably, the recombinant cell is a recombinant Agrobacterium cell.
5. 一种改善植物耐旱性的方法, 包括: 将权利要求 1所述基因的核苷酸序列或 者权利要求 2或 3所述的重组表达载体导入植物或植物组织并使所述基因表达; 优 选地, 所述植物是烟草。  A method for improving drought tolerance of a plant, comprising: introducing a nucleotide sequence of the gene of claim 1 or the recombinant expression vector of claim 2 or 3 into a plant or plant tissue and expressing the gene; Preferably, the plant is tobacco.
6. 一种制备转基因植物的方法, 包括: 在有效产生植物的条件下培养含有权利 要求 1所述基因的核苷酸序列或者权利要求 2或 3所述的重组表达载体的植物或植 物组织。  A method for producing a transgenic plant, comprising: cultivating a plant or plant tissue comprising the nucleotide sequence of the gene of claim 1 or the recombinant expression vector of claim 2 or 3 under conditions effective to produce a plant.
7. 权利要求 6所述的方法, 其中所述植物是烟草。  7. The method of claim 6 wherein the plant is tobacco.
8. 权利要求 1所述的基因、权利要求 2或 3所述的重组表达载体或者权利要求 4所述的重组细胞用于改善植物耐旱性以及用于植物育种的用途。  The gene of claim 1, the recombinant expression vector of claim 2 or 3, or the recombinant cell of claim 4 for use in improving drought tolerance of a plant and for use in plant breeding.
9. 权利要求 8所述的用途, 其中所述植物是烟草。  9. The use of claim 8 wherein the plant is tobacco.
10. 权利要求 1所述的基因编码的蛋白, 如 SEQ ID NO: 1所示。  10. The gene-encoded protein of claim 1, as set forth in SEQ ID NO: 1.
PCT/CN2012/079997 2012-08-13 2012-08-13 Cotton protein kinase and encoded gene and use thereof WO2014026311A1 (en)

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