WO2007030020A1 - System for spore detection - Google Patents
System for spore detection Download PDFInfo
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- WO2007030020A1 WO2007030020A1 PCT/NZ2006/000230 NZ2006000230W WO2007030020A1 WO 2007030020 A1 WO2007030020 A1 WO 2007030020A1 NZ 2006000230 W NZ2006000230 W NZ 2006000230W WO 2007030020 A1 WO2007030020 A1 WO 2007030020A1
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- WIPO (PCT)
- Prior art keywords
- sample
- fluorescence
- detector
- radiation
- spores
- Prior art date
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- 238000001514 detection method Methods 0.000 title claims description 22
- 238000000034 method Methods 0.000 claims abstract description 65
- 210000004215 spore Anatomy 0.000 claims abstract description 64
- 230000005855 radiation Effects 0.000 claims abstract description 51
- 210000004666 bacterial spore Anatomy 0.000 claims abstract description 35
- 238000005259 measurement Methods 0.000 claims description 16
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- 241000894006 Bacteria Species 0.000 claims description 3
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- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 6
- 241000193830 Bacillus <bacterium> Species 0.000 description 5
- 241000193738 Bacillus anthracis Species 0.000 description 5
- 235000014469 Bacillus subtilis Nutrition 0.000 description 5
- 239000010432 diamond Substances 0.000 description 5
- 229910052724 xenon Inorganic materials 0.000 description 5
- FHNFHKCVQCLJFQ-UHFFFAOYSA-N xenon atom Chemical compound [Xe] FHNFHKCVQCLJFQ-UHFFFAOYSA-N 0.000 description 5
- 244000063299 Bacillus subtilis Species 0.000 description 4
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- 241000193155 Clostridium botulinum Species 0.000 description 2
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- JKLNROLANBRABU-UHFFFAOYSA-N pyridine-2-carboxylic acid;pyridine-2,6-dicarboxylic acid Chemical compound OC(=O)C1=CC=CC=N1.OC(=O)C1=CC=CC=N1.OC(=O)C1=CC=CC(C(O)=O)=N1 JKLNROLANBRABU-UHFFFAOYSA-N 0.000 description 2
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- 241000120283 Allotinus major Species 0.000 description 1
- 208000003508 Botulism Diseases 0.000 description 1
- BHPQYMZQTOCNFJ-UHFFFAOYSA-N Calcium cation Chemical compound [Ca+2] BHPQYMZQTOCNFJ-UHFFFAOYSA-N 0.000 description 1
- 241000193403 Clostridium Species 0.000 description 1
- 241000700605 Viruses Species 0.000 description 1
- 241000607479 Yersinia pestis Species 0.000 description 1
- 238000007664 blowing Methods 0.000 description 1
- 229910001424 calcium ion Inorganic materials 0.000 description 1
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Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
- G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
- G01N21/64—Fluorescence; Phosphorescence
- G01N21/6486—Measuring fluorescence of biological material, e.g. DNA, RNA, cells
Definitions
- the present invention relates to a system for the detection of bacterial spores.
- a biological weapon incorporates an organism (bacteria, virus or other disease-causing organism) or toxin found in nature as a weapon of war.
- Biological warfare agents of critical concern include bacterial spores such as Bacillus anthra ⁇ s (anthrax), Clostridium tetani (tetanusj, and Clostridium Botulinum (botulism). Particularly Bacillus bacteria and Clostridium bacteria form bacterial spores.
- Dipicolinic acid (pyridine 2,6 dicarboxylic acid) (DPA) is a. major component of bacterial spores and it is unique in that it has only been found in spores. Up to 15% of a spore's dry weight may consist of DPA complexed with calcium ions (CaDPA).
- US patents 5,701,012 and 5,895,922 disclose a process for detecting the existence of biological particles such as spores whereby fluorescence of the particle is measured and compared against predetermined fluorescence levels.
- Bronk et al in Chemical and Biological Sensing disclose observing an increase in fluorescence intensity following heating spores in a water suspension to cause release of DPA by the spores into the water and then exposing the water to UV light.
- a method for detecting bacterial spores in a sample comprising non-destructively to the spores carrying out the steps of assessing the fluorescence of the sample, subjecting the sample to UV radiation, and reassessing the fluorescence of the sample to detect for the presence of spores.
- the physical state of the sample such as particulate, liquid, a suspension, or airborne for example, is not altered within the steps of the method.
- the method utilises an initial assessment of the fluorescence of the sample followed by irradiation with UV radiation and then a reassessment of the fluorescence of the sample for an increase in the amount of fluorescence between the two assessments.
- fluorescence increase or enhancement is indicative of the presence of spores.
- the actual fluorescence, or simply a change in fluorescence between the two measurements, may be determined.
- the fluorescence does not have to be spectrally resolved in order to detect a fluorescence increase but may optionally be spectrally resolved.
- the steps of assessing and reassessing the fluorescence include causing the fluorescence to pass through a filter oriented to pass substantially only horizontally polarised light, and assessing and reassessing the fluorescence by reference to the horizontally polarised fluorescent light.
- the excitation light is vertically polarised.
- the excitation light may be unpolarised light.
- Optimal wavelengths are generally in the range 200 to 300 nm, more preferably 250 to 300 nm, and optionally about 280 nm for the UV exposure between the assessment and reassessment of fluorescence.
- the exposure time for optimal enhancement depends upon the intensity of the UV radiation source and the number of spores that may be present in the sample.
- the enhancement exposure time is less than 20 minutes, more preferably less than 10 minutes, and most preferably less than 5 minutes.
- the sample may be subjected to a pulse of UV radiation, which may be shorter than 10 ns, and the fluorescence is reassessed after a time period, which may be between 0.1 — 10 ns.
- the time period of time corresponds to the fluorescence lifetime of the DPA fluorescence.
- the sample may be subjected to a modulated UV signal, and the fluorescence is reassessed for a modulated response.
- the reassessment is after a period of time substantially corresponding to the fluorescence lifetime of the DPA fluorescence.
- the sample may be immobilised on a support and the step of subjecting the sample to UV radiation occurs by irradiating the sample on the support with UV radiation.
- sample in an alternative embodiment in the sample may be airborne and the step of subjecting the sample to UV radiation occurs by causing the sample to pass through a beam of UV radiation.
- the sample may be a solution or a suspension, and the solution or suspension may be irradiated.
- a detector for detecting bacterial spores in a sample comprising a UV source, a detection zone within which the sample may be placed or may pass, means for fluorescence analysis arranged to assess for the presence of spores by reference to an increase in fluorescence following exposure of the sample to a UV source between assessments, without altering the structure of any spore.
- the detector is arranged to make an initial measurement of the fluorescence of the sample, followed by irradiation with UV radiation and then a re- measurement of the fluorescence of the sample.
- the results of the measurements may be output as actual fluorescence measurements, or as a reading of the change in fluorescence between the two measurements.
- the detector is arranged to subject the sample to UV radiation of wavelength in the range 200 to 300 nm, more preferably in the range 250 to 300 nm, and most preferably at about 280 nm.
- the detector is arranged to assess and reassess the fluorescence by reference substantially only to horizontally polarised fluorescent light.
- the excitation light is vertically polarised, but may alternatively be unpolarised.
- a preferred form of the detector in this embodiment includes a vertically polarising filter to polarise the UV radiation from the UV source and a horizontally polarising filter enabling detection of the horizontally polarised fluorescence.
- the detector may be arranged to subject the sample to a pulse of UV radiation and to reassess the fluorescence of the sample after a period of time, between 0.1 — 10ns, has expired.
- the period of time corresponds to the fluorescence lifetime of the DPA fluorescence.
- the detector may be arranged to assess the fluorescence of the sample, to subject the sample to a modulated UV signal and to reassess the fluorescence of the sample for a modulated response.
- the reassessment is after a period of time substantially corresponding to the fluorescence lifetime of the DPA fluorescence.
- a method of detecting bacterial spores in a sample comprising the steps of providing a detector as described above, positioning the detector so that the sample is in the detection zone, and analysing the spore content of the sample, wherein the step of analysis of the spore content includes measuring the fluorescence of the sample; exposing the sample to UV radiation and then re-measuring the fluorescence of the sample wherein the structure of any spore remains unaltered throughout the steps of the method.
- a method of ascertaining whether a sample, due to its content of bacterial spores, presents a threat to a mammal comprising the steps of providing a detector as described above, setting the sensitivity of the detector at a predetermined threshold above which a threat would be considered to be present, positioning the detector so that the sample is in the detection zone, reading or interpreting the output of the detector as either: a. above the threshold and thus the sample presents a threat, or b. below the threshold and thus the sample does not present a threat, wherein the structure of any spore remains unaltered throughout the steps of the method.
- Bacterial spores which may be detected by the invention include spores of Bacillus anthra ⁇ s, Clostridium tetani, and Clostridium Botulinum.
- the threat may be of biological warfare.
- the threat may be of bacterial contamination of a material.
- the material may be a foodstuff such as flour or milk powder and bacterial spores may include Bacillus spore.
- bacterial spore means an endospore produced within a bacterium.
- fluorescence means the emission of light of a longer wavelength by a source caused by exposure to light of a shorter wavelength from an external source.
- fluorescence lifetime refers to how long the fluorescence process exists after the sample is excited.
- sample means any sample of whatever form including particulate, on a surface or airborne, in solution or suspension including cloudy liquids such as milk.
- si ⁇ pori* means some form of substrate, slide or other surface upon which the sample may be immobilised even if only temporarily.
- unaltered* with reference to the spore structure means that the spore is not is not broken down to release the DPA or CaDPA. The DPA and CaDPA remain within the spore structure.
- unaltered* with reference to the physical state of the sample means that the sample is not subjected to any dissolution, suspension, phase change or other process.
- the surface may be the surface of the molecule, or a solid phase; it is relative to the direction of the light and of the species which is responsible for light reflection and/ or absorption.
- Figuie 1 is a generalised flow diagram of the method of the invention.
- Figure 2 is a plot of the spectral response for the enhancement of the DPA fluorescence.
- Figure 3 is a schematic of an embodiment of a detector in accordance with the invention.
- Figure 4 is a schematic of an alternative embodiment of a detector in accordance with the invention.
- Figure 5 is a schematic of an alternative embodiment of a detector in accordance with the invention.
- Figure 6 is plot of fluorescence intensity against emission wavelengdi showing the effect of using polarised light on the signal to noise , ratio.
- Figure 7 is a plot of intensity against wavelength of fluorescence before and after irradiation with UV radiation as discussed in Example 1.
- Figure 8 is a plot of intensity against wavelength of fluorescence before and after irradiation with UV radiation as discussed in Example 2.
- Figure 9 is a plot of intensity against wavelength of fluorescence before and after irradiation with UV radiation as discussed in Example 3.
- Figure 10 is a plot of intensity against wavelength of fluorescence before and after irradiation with UV radiation as discussed in Example 4.
- Figure 11 is a plot of intensity against wavelength of fluorescence before and after irradiation with UV radiation as discussed in Example 5.
- Figure 12 is a plot of intensity against wavelength of fluorescence before and after irradiation with UV radiation employing polarised light as discussed in Example 6.
- the invention comprises non-destructively to the spores: assessing the fluorescence of a sample (such as but not limited to dust, powder or a solution) which is suspected of containing bacterial spores, - exposing the sample to ultraviolet radiation, reassessing the fluorescence of the sample, and determining the presence of a sample (such as but not limited to dust, powder or a solution) which is suspected of containing bacterial spores, - exposing the sample to ultraviolet radiation, reassessing the fluorescence of the sample, and determining the presence
- a sample such as but not limited to dust, powder or a solution
- Figure 2 shows the spectral response curve for the enhancement of the DPA fluorescence.
- the full range of enhancement runs from about 230 nm to 330 nm. However the peak enhancement occurs on exposure to UV light of about
- the squares show measured intensities.
- the line is a least squares fit of a Gaussian profile to the measured data. As the maximum enhancement is observed at or near 280 nm this is an ideal region of the spectrum for assessing fluorescence enhancement.
- the sample is preferably exposed to UV in the wavelength range 300-400 nm and fluorescence is detected in the wavelength range 300-500 nm.
- the invention provides a method for detection of spores which can be carried out non-destructively without requiring heating of spores in a wet environment.
- the method may be implemented, for example, on a desktop, or an envelope by a handheld detectot, via a detector incorporated in a roller in a mail sorting machine, or for airborne spores.
- Operational modes may include continuously blowing an air sample through a detector or taking a sample of a suspect powder by picking it up on tape or using an electrostatic screen or taking a sample of a liquid specimen.
- FIG. 3 illustrates one embodiment of a detector in accordance with the invention.
- the Figure illustrates the sample 1, which may be a dry or a wet sample, a broad band UV lamp 2 as the UV source, and a diode detector 3.
- the UV radiation is focussed onto the sample by means of a lens 6, and the light passes through a long wavelength UV filter 4 (such as a 350nm filter).
- the fluorescence passes through a further filter 5 (such as a 450nm filter) to block the light that is simply reflected from the sample and to make certain that only the fluorescence will be detected before being focused by means of a lens 7, and detected by the detector 3.
- the amount of light detected for the purposes of this discussion will be called measurement #1.
- the long wavelength UV filter 4 can then be rotated out of the optical path and the sample is irradiated with all wavelengths of light from the lamp, including the short and mid wavelength UV light. The detector is not used during this time. Finally, the long wavelength UV filter 4 is rotated back into the optical path. The fluorescence passes through filter 5 and lens 7 to detector 3. If the intensity of the fluorescence at detector 3 has increased over measurement #1, then the sample contains bacterial spores. The amount of increase is proportional to the number of spores.
- FIG 4 illustrates a form of a detector and method of the invention that uses no moving parts (like the rotating filter used in Figure 2).
- the Figure illustrates the sample 10, which may be a dry or a wet sample, a UV lamp 12, which may be a UV light emitting diode or a diode laser as the UV source, and a diode detector 11.
- the UV radiation can pass through a long wavelength UV filter 13 (such as a 350nm filter) if the light from UV source is broadband. If a UV light emitting diode or UV diode laser is used the filter will not be necessary.
- the light might be further focussed on the sample with a lens.
- the fluorescence can be collected by a second lens and passes through a filter 14 (such as a 450nm filter) to block the light that is simply reflected from the sample and to make certain that only the fluorescence will be detected by the detector 11.
- the amount of light detected for the purposes of this discussion will be called measurement #1.
- the sample is irradiated with a second UV lamp 15, with 250 to 300 nm UV light. This lamp does not need to be filtered, but can be focussed onto the sample by a lens.
- the detector 11 is not used during this time.
- the sample is again irradiated with the UV lamp 12 and the fluorescence is collected by a lens and passes through the filter 14 (such as a 450nm filter) to block the light that is simply reflected from the sample and to make certain that only the fluorescence will be detected by the detector 11. If the intensity of the fluorescence at detector 11 has increased over measurement #1, then the sample contains bacterial spores. The amount of increase is proportional to the number of spores.
- Figure 5 illustrates a form of a detector and method of the invention that uses no moving parts but permits one to measure a moving sample, such as milk powder moving on a conveyer belt or envelopes moving through a postal sorter.
- the Figure illustrates the sample 20, which may be a dry or a wet sample moving at a constant speed as shown by the arrow, a UV lamp 24, which may be a UV light emitting diode or a diode laser as the UV source, and a diode detector 21.
- the UV radiation can pass through a long wavelength UV filter — not shown (such as a 350nm filter) if the light from UV source is broadband. If a UV light emitting diode or UV diode laser is a used the filter will not be necessary.
- the light may be further focussed on the sample with a lens.
- the fluorescence can be collected by a second lens (not shown) and passes through a filter 22 (such as a 450nm filter) to block the light that is simply reflected from the sample and to ensure that only the fluorescence will be detected by the detector 21.
- the amount of light detected for the purposes of this discussion will be called measurement #1.
- the sample is irradiated by a second UV lamp 23, with 250 to 300 nm UV light. This lamp does not need to be filtered, but can be focussed onto the sample (no lens shown).
- the sample is again irradiated with the UV lamp 25, which might be a UV light emitting diode or a diode laser as the UV source, and a diode detector 26.
- the UV radiation can pass through a long wavelength UV filter — not shown (such as a 350nm filter) if the light from UV source is broadband. If a UV light emitting diode or UV diode laser is a used the filter will not be necessary.
- the light might be further focussed on the sample with a lens.
- the fluorescence can be collected by a second lens (not shown) and passes through a filter 27 (such as a 450nm filter) to block the light that is simply reflected from the sample and to make certain that only the fluorescence will be detected by the detector 26.
- the sample contains bacterial spores.
- the amount of increase is proportional to the number of spores.
- the measurements between detectors 21 and 26 must be delayed by the time required for the sample to move between the two detectors.
- UV light sources include lamps (including fluorescent lamps, gas lamps, tungsten filament lamps, quartz lamps, halogen lamps, arc lamps, and pulsed discharge lamps, for example), and UV light emitting diodes, laser diodes, laser of any type capable of producing UV radiation (such as gas, dye or solid state) and two-photon techniques where two separate photons of differing wavelength as used to provide the required excitation wavelength.
- lamps including fluorescent lamps, gas lamps, tungsten filament lamps, quartz lamps, halogen lamps, arc lamps, and pulsed discharge lamps, for example
- UV light emitting diodes laser diodes, laser of any type capable of producing UV radiation (such as gas, dye or solid state) and two-photon techniques where two separate photons of differing wavelength as used to provide the required excitation wavelength.
- a 280nm light necessary to bring about fluorescence enhancement can be achieved from a high intensity of 560nm light. Two photons of 560nm could be simultaneously absorbed to create the same effect and. response as one 280nm
- the detector may be any photodetectors for the detection of light. These may include, but are not limited to, photodiodes, phototransisitors, photoresistors, photomultipliers, pyroelectric detectors, and chemical detectors, such as photographic plates.
- the detector can be a single element detector like a photodiode that measures all light incident on the detector window, or it could be a image detector, like a silver halide emulsion on a photographic plate or a CCD photodiode array.
- the detector needs to be sensitive to the range of wavelengths of light emitted from the fluorescing spores.
- a detection system of the invention may include means for analysis of the fluorescence.
- Such means may include computer processing apparatus which, for example records fluorescence recorded or detected before irradiation and compares it with that recorded or detected after, identifies any fluorescence enhancement indicating the presence of spores.
- the analysis means may determine actual fluorescence measurements or it may simply determine the difference between the first and subsequent recording, and determine if an enhancement has been observed.
- the analysis means may record and store the outputs or it may simply trigger an alarm for example, if bacterial spores (or spores greater than a threshold limit) are detected.
- An alternative form of the invention incorporates the detection of polarised light.
- the detection of polarised light provides a means to improve tibe ratio of the fluorescence signal to the background signal.
- FIG. 6 is a plot of intensity against wavelength showing fluorescence from spores observed for the arrangements of no polarisation; vertical-vertical polarisation (ie vertical incoming light; vertical detected fluorescence) and vertical — horizontal ((ie vertical incoming light; horizontal detected fluorescence). This shows an improvement of signal to noise for the vertical-horizontal arrangement as discussed previously. This is particularly true at the lower wavelengths.
- Suitable apparatus for this embodiment can be arranged by incorporation of polarising filters into the previously described apparatus. At least a horizontally polarising filter before the detector, and a vertically polarising filter may also be employed with the UV source.
- the enhanced fluorescence observed in the methods of all embodiments of the invention is always due to the existence of DPA.
- the wavelengths of fluorescence may be different depending upon the environment of the DPA.
- a simple detector may be used to observe only enhancement and thus indicate whether or not spores are present.
- the shape of the fluorescence can be analysed to determine what class of bacterial spores are present in a sample.
- Some embodiments of the invention may take advantage of the phenomenon that fluorescence has a distinct lifetime. This lifetime is relative to that of the scattered light, which has a zero lifetime. Specifically, after light is absorbed by the spore it takes a short amount of time for the fluorescence to occur. This is usually between 0.1-10 ns. Thus in general terms if following a short pulsed excitation, emitted light having a zero lifetime is ignored and other emitted light detected, the contribution to the emission by scattering is reduced and thus the signal to noise ratio improved.
- An alternative means of taking advantage of this phenomenon involves modulating the intensity of the light, for example in a sinusoidal fashion.
- the fluorescence of the DPA follows the modulation of the exciting light, delayed by the fluorescence lifetime of the enhanced DPA.
- a modulated fluorescence signal is detected (again for example a sine wave type signal, if the exciting light was modulated accordingly) delayed by the fluorescence lifetime.
- the sensitivity of the detector can be set to ignore the few bacterial spores that occur naturally.
- Biological weaponry such as andirax requires approximately 10,000 anthrax spores to lethally infect a person with a 50% probability.
- the detection limit may be set at for example 100 spores. This is well above the background level for spores, and 1000 times lower than the level needed to lethally infect individuals.
- many bacterial spores are relative harmless to humans, others cause gastrointestinal problems and others (like anthrax) are deadly.
- the levels of bacterial spores should almost always be quite low in the environment thus the detection of bacterial spores above a given threshold level would more than likely signal bioterrorism.
- the invention has importance in the bioterrorism field however there are many other applications as would be known to one skilled in the art. Examples include (but are not limited to) the situation in New Zealand where MAF has sprayed certain areas with Bacillus bacterial spores as an insecticide against unwanted pests.
- the method of the invention and a detector of the invention could be employed to detect levels of exposure which would be severely detrimental to the public or such susceptible persons, or to show which regions are safe for such susceptible persons to occupy during spraying.
- a further important application of the method and detector of the invention is identifying and quantifying bacterial spores in dried products such as foodstuffs.
- One particular application is identification and quantification of Baci/lus bacterial spores in milk powder.
- the method of the invention may also be used for detecting spores in a water supply or an air supply, in various medical applications, and in fuels, for example.
- the method helps to separate the bacterial spore fluorescence from the fluorescence of other materials for example those found in dust. Thus this enhances discrimination to a point of nearly eliminating false positives.
- Nd: YAG laser it is common to frequency double, triple and quadruple the light from a Nd: YAG laser. With use of the tripled (355 nm) and the quadrupled (266 nm) light from a Nd: YAG laser, the resolution is such that single spores may be detected by the method of the invention. Lasers other than the Nd:YAG could also be used, such as diode lasers.
- Figure 7 presents the results of an experiment whereby a sample Bacillus subtilis, a bacterial spore related to anthrax and commonly used as an anthrax simulant, was irradiated with UV light of wavelength 350nm.
- the open diamonds show the fluorescence before irradiation and the solid squares show the fluorescence after being treated with UV light. The enhancement of fluorescence is considerable.
- the fluorescence is measured and plotted as arbitrary units (a.u.) on the figure.
- the B. subtilis sample was a dilute water suspension of the spores. The suspension measured 0.1 OD at 600 nm in a 1 cm cuvette.
- the fluorescence was measured using 4 nm bandwidth light at 350 nm and detecting the fluorescence of 375 to 675 nm in 1 nm step with a 4 nm bandwidth.
- the sample was irradiated with a 150 W xenon arc lamp (unfocussed and 40 cm away from the sample) for 15 minutes.
- Example 4 The same commercial milk powder as used in Example 2 was dissolved in water to make a dilute sample of milk (the sample measured approximately 1.0 O.D. at 600 nm in a spectrophotometer). With reference to Figure 9, the fluorescence was measured before (white diamonds) and after (solid squares) irradiation with a 150 W xenon arc lam (unfocussed and 40 cm away from the sample) for 15 minutes. The fluorescence was measured at 350 nm excitation.
- Example 4 The same commercial milk powder as used in Example 2 was dissolved in water to make a dilute sample of milk (the sample measured approximately 1.0 O.D. at 600 nm in a spectrophotometer). With reference to Figure 9, the fluorescence was measured before (white diamonds) and after (solid squares) irradiation with a 150 W xenon arc lam (unfocussed and 40 cm away from the sample) for 15 minutes. The fluorescence was measured at 350 nm excitation.
- Example 4
- Example 5 A dilute suspension of Bacillus globigii spores were suspended in water (the sample measured approximately 0.1 OD at 600 nm in a spectrophotometer). With reference to Figure 11 the fluorescence was measured before (white diamonds) and after (solid squares) irradiation with a 150 W xenon arc lamp (unfocussed and 40 cm away from the sample) for 15 minutes. The fluorescence was measured at 350 nm excitation.
- FIG. 12 This Figure is a plot of the difference in fluorescence intensity (after minus before enhancement) against wavelength for the different polarization configurations. The total amount of light measured was normalized to account for any intensity fluctuations. It is evident from the Figure that the vertical-horizontal arrangement shows improved signal to noise output.
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- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- General Physics & Mathematics (AREA)
- Immunology (AREA)
- Pathology (AREA)
- Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Abstract
Description
Claims
Priority Applications (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
GB0805032A GB2445488B (en) | 2005-09-05 | 2006-09-05 | System for spore detection |
AU2006288014A AU2006288014B2 (en) | 2005-09-05 | 2006-09-05 | System for spore detection |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
NZ542230 | 2005-09-05 | ||
NZ542230A NZ542230A (en) | 2005-09-05 | 2005-09-05 | System for spore detection |
Publications (1)
Publication Number | Publication Date |
---|---|
WO2007030020A1 true WO2007030020A1 (en) | 2007-03-15 |
Family
ID=37836073
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/NZ2006/000230 WO2007030020A1 (en) | 2005-09-05 | 2006-09-05 | System for spore detection |
Country Status (4)
Country | Link |
---|---|
AU (1) | AU2006288014B2 (en) |
GB (1) | GB2445488B (en) |
NZ (1) | NZ542230A (en) |
WO (1) | WO2007030020A1 (en) |
Cited By (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2008030113A1 (en) * | 2006-09-05 | 2008-03-13 | Veritide Limited | Method for detection or identification of bacteria or bacterial spores |
WO2008147227A1 (en) * | 2007-05-31 | 2008-12-04 | Veritide Limited | Method for spore detection |
WO2010072895A1 (en) * | 2008-12-23 | 2010-07-01 | Mp-Microbe Oy | Method and device for detecting micro-organisms from fluid |
US8512975B2 (en) | 2008-07-24 | 2013-08-20 | Biomerieux, Inc. | Method for detection and characterization of a microorganism in a sample using time dependent spectroscopic measurements |
US8647835B2 (en) | 2008-10-31 | 2014-02-11 | BIO MéRIEUX, INC. | Methods for separation, characterization and/or identification of microorganisms using spectroscopy |
US8652800B2 (en) | 2008-10-31 | 2014-02-18 | Biomerieux, Inc. | Method for separation, characterization and/or identification of microorganisms using spectroscopy |
US8748122B2 (en) | 2008-12-16 | 2014-06-10 | BIO MéRIEUX, INC. | Methods for the characterization of microorganisms on solid or semi-solid media |
US9128058B2 (en) | 2008-10-31 | 2015-09-08 | Biomerieux, Inc. | Method for separation and characterization of microorganisms using identifier agents |
US9790534B2 (en) | 2008-10-31 | 2017-10-17 | Biomerieux, Inc. | Methods for separation, characterization and/or identification of microorganisms using spectroscopy |
US10059975B2 (en) | 2008-10-31 | 2018-08-28 | Biomerieux, Inc. | Methods for the isolation and identification of microorganisms |
US10167494B2 (en) | 2008-10-31 | 2019-01-01 | Biomerieux, Inc. | Method for detection, characterization and/or identification of microorganisms in a sealed container |
US10316347B2 (en) | 2014-06-26 | 2019-06-11 | Ecolab Usa Inc. | Endospore detection using hydrophobic collection material |
CN115963074A (en) * | 2023-02-23 | 2023-04-14 | 中国人民解放军国防科技大学 | Rapid detection method and system for spore and hypha ratio of microbial material |
Citations (6)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002029388A2 (en) * | 2000-10-04 | 2002-04-11 | Genvec, Inc. | Fluorescence detection |
US6498041B1 (en) * | 2000-08-18 | 2002-12-24 | Echo Technologies, Inc. | Optical sensors for rapid, sensitive detection and quantitation of bacterial spores |
US6617591B1 (en) * | 2001-12-03 | 2003-09-09 | Sandia Corporation | Method for remote detection of trace contaminants |
WO2003089661A1 (en) * | 2002-04-16 | 2003-10-30 | The Johns Hopkins University | Method and apparatus for detection of bioaerosols |
WO2004015421A1 (en) * | 2002-08-07 | 2004-02-19 | Cyflo Oy | Method and device for identifying micro organisms |
WO2004048947A1 (en) * | 2002-11-21 | 2004-06-10 | Cdex, Inc. | Methods and appartus for molecular species detection, inspection and classification using ultraviolet fluorescence |
Family Cites Families (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20040072356A1 (en) * | 2002-02-20 | 2004-04-15 | Guillermo Senisterra | Methods and apparatuses for characterizing stability of biological molecules |
US7587236B2 (en) * | 2004-01-08 | 2009-09-08 | Lawrence Livermore National Security, Llc | Optical spectroscopy for the detection of ischemic tissue injury |
-
2005
- 2005-09-05 NZ NZ542230A patent/NZ542230A/en not_active IP Right Cessation
-
2006
- 2006-09-05 GB GB0805032A patent/GB2445488B/en not_active Expired - Fee Related
- 2006-09-05 AU AU2006288014A patent/AU2006288014B2/en not_active Ceased
- 2006-09-05 WO PCT/NZ2006/000230 patent/WO2007030020A1/en active Application Filing
Patent Citations (6)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6498041B1 (en) * | 2000-08-18 | 2002-12-24 | Echo Technologies, Inc. | Optical sensors for rapid, sensitive detection and quantitation of bacterial spores |
WO2002029388A2 (en) * | 2000-10-04 | 2002-04-11 | Genvec, Inc. | Fluorescence detection |
US6617591B1 (en) * | 2001-12-03 | 2003-09-09 | Sandia Corporation | Method for remote detection of trace contaminants |
WO2003089661A1 (en) * | 2002-04-16 | 2003-10-30 | The Johns Hopkins University | Method and apparatus for detection of bioaerosols |
WO2004015421A1 (en) * | 2002-08-07 | 2004-02-19 | Cyflo Oy | Method and device for identifying micro organisms |
WO2004048947A1 (en) * | 2002-11-21 | 2004-06-10 | Cdex, Inc. | Methods and appartus for molecular species detection, inspection and classification using ultraviolet fluorescence |
Cited By (17)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2008030113A1 (en) * | 2006-09-05 | 2008-03-13 | Veritide Limited | Method for detection or identification of bacteria or bacterial spores |
WO2008147227A1 (en) * | 2007-05-31 | 2008-12-04 | Veritide Limited | Method for spore detection |
US8709748B2 (en) | 2008-07-24 | 2014-04-29 | Biomerieux, Inc. | Method for detection and characterization of a microorganism in a sample using time-dependent intrinsic fluorescence measurements |
US10435733B2 (en) | 2008-07-24 | 2019-10-08 | Biomerieux, Inc. | Method and system for detection and/or characterization of a biological particle in a sample |
US8512975B2 (en) | 2008-07-24 | 2013-08-20 | Biomerieux, Inc. | Method for detection and characterization of a microorganism in a sample using time dependent spectroscopic measurements |
US10059975B2 (en) | 2008-10-31 | 2018-08-28 | Biomerieux, Inc. | Methods for the isolation and identification of microorganisms |
US8652800B2 (en) | 2008-10-31 | 2014-02-18 | Biomerieux, Inc. | Method for separation, characterization and/or identification of microorganisms using spectroscopy |
US9128058B2 (en) | 2008-10-31 | 2015-09-08 | Biomerieux, Inc. | Method for separation and characterization of microorganisms using identifier agents |
US9790534B2 (en) | 2008-10-31 | 2017-10-17 | Biomerieux, Inc. | Methods for separation, characterization and/or identification of microorganisms using spectroscopy |
US8647835B2 (en) | 2008-10-31 | 2014-02-11 | BIO MéRIEUX, INC. | Methods for separation, characterization and/or identification of microorganisms using spectroscopy |
US10167494B2 (en) | 2008-10-31 | 2019-01-01 | Biomerieux, Inc. | Method for detection, characterization and/or identification of microorganisms in a sealed container |
US8748122B2 (en) | 2008-12-16 | 2014-06-10 | BIO MéRIEUX, INC. | Methods for the characterization of microorganisms on solid or semi-solid media |
US8795983B2 (en) | 2008-12-16 | 2014-08-05 | Biomerieux, Inc. | Methods for the characterization of microorganisms on solid or semi-solid media |
US9822389B2 (en) | 2008-12-16 | 2017-11-21 | bioMerièux, Inc | Method for the characterization of microorganisms on solid or semi-solid media |
WO2010072895A1 (en) * | 2008-12-23 | 2010-07-01 | Mp-Microbe Oy | Method and device for detecting micro-organisms from fluid |
US10316347B2 (en) | 2014-06-26 | 2019-06-11 | Ecolab Usa Inc. | Endospore detection using hydrophobic collection material |
CN115963074A (en) * | 2023-02-23 | 2023-04-14 | 中国人民解放军国防科技大学 | Rapid detection method and system for spore and hypha ratio of microbial material |
Also Published As
Publication number | Publication date |
---|---|
AU2006288014B2 (en) | 2012-12-06 |
GB0805032D0 (en) | 2008-04-30 |
NZ542230A (en) | 2008-05-30 |
GB2445488B (en) | 2010-10-06 |
AU2006288014A1 (en) | 2007-03-15 |
GB2445488A (en) | 2008-07-09 |
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