WO2001073013A1 - A novel polypeptide, a human ribosome s7 protein 16 and the polynucleotide encoding the polypeptide - Google Patents

A novel polypeptide, a human ribosome s7 protein 16 and the polynucleotide encoding the polypeptide Download PDF

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Publication number
WO2001073013A1
WO2001073013A1 PCT/CN2001/000528 CN0100528W WO0173013A1 WO 2001073013 A1 WO2001073013 A1 WO 2001073013A1 CN 0100528 W CN0100528 W CN 0100528W WO 0173013 A1 WO0173013 A1 WO 0173013A1
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protein
polypeptide
polynucleotide
human
sequence
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PCT/CN2001/000528
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French (fr)
Chinese (zh)
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Yumin Mao
Yi Xie
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Biowindow Gene Development Inc. Shanghai
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Priority to AU73781/01A priority Critical patent/AU7378101A/en
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide—a human ribosomal S7 protein 16, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and polypeptide. Background technique
  • the correct translation of proteins is very important for all bacteria and higher organisms.
  • the research on the regulation mechanism of protein translation is obtained from E. coli.
  • the protein translation process is mainly completed by various aminoacyl-tRNA synthetases, various tRNAs, and ribosomes.
  • the ribosome and other cofactors together provide the full enzymatic activity of the translation process. Ribosomes are only available if the entire crust is intact. Therefore, the ribosome and its constituent subunits act synergistically in the body and play an important physiological function.
  • Ribosomes are organelles that synthesize proteins. Their sole function is to synthesize polypeptide chains from amino acids in accordance with the instructions of mRNA. It is called ribosome, and is simply called ribosome or ribosome. Ribosomes are found in almost all cells, whether in prokaryotic or eukaryotic cells, there are a large number of ribosomes. The ribosome is a granular structure without a membrane. Its diameter is 25 nm. The main components are protein and RNA. Ribosomal RNA is called rRNA. The protein content is about 40% and RM is about 60%.
  • Protein molecules are mainly distributed on the surface of the ribosome, while rRNA is located inside, and the two are bound together by non-covalent bonds.
  • Cell Biology Szhonghe Higher Education Press PP122-129 The function of ribosomes has focused on the ribosome R'A. There are many rRNA functional domains that determine different functions of the ribosome. (Annu Rev Biochem 1991; 60 191-227)
  • ribosomes There are two basic types of ribosomes in biological organism cells: one is a 70S (S is the Sverdberg sedimentation coefficient unit) ribosome, and all prokaryotic cells are 70S ribosomes in eukaryotic cells. Approximately 70S. The other is 80S ribosomes. The ribosomes of eukaryotic cells (except for mitochondria and chloroplast ribose) are 80S. Ribosomes, whether 70S or 80S, are composed of two subunits of different sizes.
  • the ribosome size subunits are often free in the cytoplasmic matrix within the cell. Only when the small subunits are combined with mRNA do the large subunits bind to the small subunits to form a complete ribosome. After the peptide synthesis is terminated, the large and small subunits dissociate and then exist freely in the cytoplasmic matrix.
  • S7 is one of the small subunits of ribosomal binding protein, and it exists in most prokaryotic cells with homologous proteins Biological and eukaryotic cells.
  • All ribosomal eggs contain a conserved region at the N-terminus of S7, which contains the following consensus sequence fragments: [DENSK]-X- [LIVMET] — X (3) [LIVMFT] (2) - ⁇ (6 ) -G--[KR] - ⁇ (5)-[LIVMF]-[LIVMFC] -x (2)-[STA].
  • This sequence fragment is contained in ribosomal protein S7 in many different organisms.
  • This conserved structural motif is of great significance for the binding process of ribosomal protein S7 and ribosomal RNA, and this fragment may play a normal role in ribosomes. Physiological functions play an important regulatory role.
  • ribosomal protein S7 can directly bind to the 3 'end of 16S ribosomal RNA.
  • Ribosomal protein S7 plays an important role in the translation process of proteins. If it is deleted or chemically modified, or the gene encoding it is mutated, it will affect the function of ribosomes and reduce the activity of peptide synthesis. Although the research on the function of ribosomal protein S7 is not thorough enough, according to various research results, it can be proved that the functions of ribosomal protein S7 include: (1) It is very important for rRNA to fold into a functional three-dimensional structure; (2 ) In protein synthesis, the spatial conformation of the ribosome undergoes a series of changes, and ribosomal white may play a "fine-tuning" role in the conformation of the ribosome; (3) it may even play a catalytic role in the ribosome binding site, Ribosome proteins work together with rRNA.
  • ribosomal protein S7 Based on the sequence similarity of ribosomal protein S7, it is considered to belong to the ribosomal protein family. Deletion of this protein will slow down cell growth [] ⁇ Stephen Gantt, Michael D. Thompson, 1990, J. Biol. Chem., 265: 2763-2767] 0 Therefore, ribosomal protein S7 is transcribed and translated from DNA It plays an extremely important role in cell proliferation. Its abnormal expression will cause the growth rate of the tissue to slow down, which will cause various developmental disorders, such as stunting.
  • the expression profile of the present invention is very similar to the expression profile of human ribosomal S7 protein 9, and the two functions may be similar.
  • the invention is named human ribosomal S7 protein 16.
  • the human nuclear S7 protein 16 protein plays an important role in regulating important functions of the body such as cell division and fetal development, and it is believed that a large number of proteins are involved in these regulatory processes, so more needs to be identified in the field.
  • the human ribosomal S7 protein 16 protein involved in these processes especially the identification of the amino acid sequence of this protein.
  • the isolation of the new human ribosome S7 protein 16 protein encoding gene also provides a basis for studying the role of this protein in health and disease states. . This protein may form the basis for the development of diagnostic and / or therapeutic agents for the disease. 21 It is important to isolate its coding DNA. Disclosure of invention
  • the present invention also provides a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding a human nucleosome S7 protein 16.
  • Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding a human ribosome S7 protein 16.
  • Another object of the present invention is to provide a method for producing human ribosomal S7 protein 16.
  • Another object of the present invention is to provide an antibody against the polypeptide-human ribosomal S7 protein 16 of the present invention.
  • Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors of the polytitanium-human ribosomal S7 protein 16 of the present invention.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of human ribosomal S7 protein 16.
  • the invention includes a step and an isolated polypeptide, the polypeptide is human: it includes: a polypeptide having the amino acid sequence of SEQ ID No. 2 or a conservative variant, biologically active fragment or derivative thereof.
  • the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence of SEQ ID NO: 1 with a sequence of 80 and 122 ⁇ M ⁇ ?; and (b) a sequence with SEQ ID NO: i- A sequence of 1-2533 bits;
  • the present invention further relates to a vector, particularly an expression vector, containing the polynucleoside 3 ⁇ 4 of the present invention; a host cell engineered with the vector, including a transformed, transduced or transfected host cell; The method for preparing the main cell and recovering the expressed product is described.
  • the present invention relates to an antibody capable of specifically binding to the polypeptide of the present invention.
  • the present invention relates to a screening method for mimicking, activating, anti-or inhibiting or inhibiting the activity of the human ribosome S7 protein 16 protein, which includes the use of the present invention.
  • the invention also relates to compounds obtained by this method.
  • the present invention also relates to a method for in vitro detection of diseases or susceptibility to diseases associated with abnormal expression of human ribosomal S 7 protein 16 protein, comprising detecting mutations in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample. Or Detecting the amount or biological activity of the polypeptide of the present invention in a biological product.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • the present invention also relates to the use of the polyamidine and / or polynucleotide of the present invention in the preparation of a medicament for treating cancer, developmental disease or immune disease or other diseases caused by abnormal expression of human ribosomal S 7 protein 16.
  • Nucleic acid sequence refers to an oligonucleotide, a nucleotide, or a polynucleotide and a fragment or part thereof, and may also refer to the genome Or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof.
  • amino acid sequence in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide” or “protein” does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
  • a protein or polynucleotide “variant” refers to an amino acid sequence or a polynucleotide sequence that has one or more amino acids or nucleotide changes.
  • the changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide string.
  • the X-body may have "conservative" changes, in which the substituted amino acid has similar structural or chemical properties as the original amino acid, such as replacing isoleucine with leucine.
  • Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • “Deletion” means the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence
  • Insertion means that a change in the amino acid sequence or nucleotide sequence results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule.
  • Replacement refers to the replacement of one or more A amino acids or nucleotides by different amino acids or nucleotides.
  • Bioactivity refers to proteins that have the structure, regulation, or biochemical function of natural molecules.
  • immunological activity refers to the ability of natural, recombinant, or synthetic white matter and fragments thereof to induce a specific immune response in appropriate animals or cells and to bind to specific antibodies.
  • Agitated 'r' means when bound to '16 Glycoprotein S 7 protein. One can cause changes in this protein A molecule that regulates the activity of the protein.
  • An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind to human ribosomal S7 protein 16.
  • Antagonist refers to a molecule that, when combined with human ribosome S7 protein 16, can block or regulate the biological or immunological activity of human ribosome S7 protein 16.
  • Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that binds human ribosomal S7 protein 16.
  • Regular refers to a change in the function of human ribosome S7 protein 16, including an increase or decrease in protein activity, a change in binding characteristics, and any other biological, functional, or immune properties of human ribosome S7 protein 16.
  • substantially pure ' means substantially free of other proteins, lipids, sugars or other substances with which it is naturally associated.
  • Those skilled in the art can purify human ribosomal S7 protein 16 using standard protein purification techniques. Basically Pure human ribosomal S7 protein 16 can generate a single main band on a non-reducing polyacrylamide gel. The purity of human ribosomal S7 protein 16 polypeptide can be analyzed by amino acid sequence.
  • Complementary refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature.
  • sequence C-T-G-A
  • complementary sequence G-A-C-T.
  • the complementarity between two single-stranded molecules may be partial or complete.
  • the degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Northern imprinting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require the binding of two sequences to each other as a specific or selective interaction.
  • Percent identity refers to the percentage of sequences that are the same or similar in the comparison of two or more amino acid or nucleic acid sequences. The percentage of identity can be determined electronically, such as through the MEGALIGN program (Lasergene software package, DNASTAR, Inc., Mad Son). Wis.) ; MEGALIGN program can compare two or more sequences according to different methods such as Cluster method (Higgins, DG and PM Sharp (1988) Gene 73: 237-244) 0 Cluster method checks the distance between all pairs The groups of sequences are arranged into clusters. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: Number of residues A matching between sequence A and sequence B
  • the percent identity between nucleic acid sequences can also be determined by the Cluster method or by well-known methods such as Jotun Hein (Hein J., (1990) Methods in emzumology 183: 625-645).
  • Similarity refers to the degree of amino acid sequence: the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment.
  • Amino acids used for conservative substitutions for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino carboxyls may include lysine and arginine; have uncharged head groups
  • Amino acids with similar hydrophilicity include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
  • Antisense refers to a nucleotide sequence that is complementary to a particular DNA or RNA ⁇ 'j.
  • Antisense strand refers to a nucleic acid strand that is complementary to a “sense strand.”
  • Derivative means HFP or a chemical modification that encodes it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa, F (ab ') 2 and Fv, which can specifically bind to the antigenic determination of human ribosomal S 7 protein 16.
  • Humanized antibody means non-antigen binding :! The amino acid sequence of the domain has been replaced to become more similar to a human antibody, but still retains the original binding activity.
  • isolated refers to the removal of matter from its environment (for example, its natural environment if it occurs naturally).
  • naturally occurring polynucleotides or polypeptides are not isolated in the presence of two living animals, but Tongxiang polyglycosides or peptides are separated from some or all of the substances that coexist in the natural system. of.
  • the polynucleotide of the zenith may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment: such as polynucleotides and polypeptides in their natural state in living cells are It is not isolated and purified, but the same polynucleotide or polypeptide is separated from other substances existing in its natural state. It is isolated and pure.
  • isolated human ribose ⁇ S7 protein 16 means that human ribosomal S7 white 16 basically contains other proteins, class 3 ⁇ 4, class 3 ⁇ 4, or other substances naturally associated with it. Skilled person Humans can purify human ribosomal S7 protein 16 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the human ribosomal S7 protein 16 polypeptide can be analyzed by amino acid sequence.
  • the present invention provides a new polypeptide-human ribosomal S7 protein 16, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide.
  • the polypeptides of the invention may be naturally purified products, or chemically synthesized products, or produced using recombinant techniques from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells). Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
  • the invention also includes fragments, derivatives and analogs of the human ribosome S7 protein 16.
  • the terms ",” “derivatives” and “analogs” refer to polypeptides that substantially retain the same biological function or activity of the human ribosome S7 protein 16 of the invention.
  • the analog or analog may be: (I) a type in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substituted amino acid may or may not be Encoded by the genetic codon; or (II) such a type in which a group on one or more amino acid residues is replaced by another group to include a substituent; or (in) this type, wherein the mature polypeptide Fusion with another compound (such as a compound that prolongs the half-life of a polypeptide, such as polyethylene glycol); or (IV) a polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide, J 'J (as in the leading column Or secreted sequences or sequences used to purify this polypeptide or protease sequences) As explained herein, these fragments, derivatives and similar It is considered within the knowledge of those skilled in the art.
  • the present invention provides an isolated nucleic acid (polynucleotide). It consists essentially of a polynucleotide encoding a polynucleotide having the amino acid sequence of SEQ ID NO: 2.
  • the polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a full-length polynucleotide sequence of 2533 bases, and its open reading frame 801-1229 encodes 142 amino acids.
  • this polypeptide has a similar expression profile with human ribosomal S7 protein 9, and it can be deduced that the human ribosomal S7 protein 16 has similar functions to human ribosomal S7 protein 9.
  • the polynucleotide of the present invention may be in the form of DNA or RNA.
  • DNA forms include cDNA, genomic DNA, or synthetic DNA.
  • DNA can be single-stranded or double-stranded.
  • the DNA may be a coding or non-coding strand.
  • the coding region sequence of a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or it may be a variant.
  • “Degenerate variant" in the present invention refers to a protein or polypeptide prepared by SEQ ID NO: 2, ":" blue and the coding sequence shown in SEQ ID NO: 1 Differentiated nucleic acid sequences are listed.
  • the polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the mature coding sequence and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences) And non-coding sequences.
  • polynucleotide encoding a polypeptide refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
  • the present invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the present invention.
  • Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide, which may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially alter the polypeptides it encodes.
  • the present invention also relates to a polynucleoside carboxylate that hybridizes to the sequence described above (having at least 50. preferably 70% identity between the two sequences).
  • the present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions.
  • “strict conditions” means: (1) hybridization and elution at lower ion strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) during hybridization Add denaturants, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% Ficoll, 42'C, etc .; or (3) the identity between the two sequences is at least 95 % Or more, more preferably 97. /. Only when the above hybridization occurs.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological energy and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • nucleic acid fragments that hybridize to the sequences described above.
  • nucleic acid fragments can also be amplified by nucleic acid amplification technology (such as PCR) to determine and / or isolate the polynucleotide encoding human ribosomal S7 protein 16.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • the specific polynucleotide sequence encoding human ribosomal S7 protein 16 can be obtained by various methods.
  • Example "5. Isolate polynucleotides using hybridization techniques well known in the art. These techniques include but are not limited to: 1) hybridizing a probe to a genomic or cDNA library to detect homologous polynucleotide sequences, and 2) The antibodies of the expression library are screened to detect cloned polynucleotide fragments having common structural characteristics.
  • the DNA fragment sequence of the present invention can also be obtained by the following methods: 1) separating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide :
  • genomic DNA is the least commonly used: direct chemical synthesis of DNA sequences Is the method of choice.
  • the more commonly used method is the isolation of cDNA sequences.
  • the standard method for isolating cDNA of interest is to isolate mRM from donor cells that overexpress this group 3 and perform reverse transcription to form a plasmid or phage cDNA library.
  • the construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Labora tory Manua 1, Cold Spring Harbor Laboratory. New York, 1989).
  • Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction is used in combination, even very small expression products can be cloned.
  • genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of a marker gene function; (3) determination of the transcript of human ribosomal S7 protein 16; (4) ) Detecting protein products of gene expression by immunological techniques or measuring biological activity-The above methods can be used alone or in combination.
  • the probe for heterozygous hearing is homologous to any part of the polynucleotide of the present invention, and has a length of at least 10 nucleosides, preferably at least 30 nucleotides, more Fortunately, at least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2,000 nucleotides, preferably 1,000 nucleotides.
  • the probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The gene itself or a fragment thereof can of course be used as a probe. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
  • the detection of: '' the protein product of human ribosomal S7 protein 16 gene expression can be used immunological techniques such as Western blotting, radioimmunoprecipitation, enzyme-linked immunosorbent assay (ELISA), etc. .
  • the RACE method RACE-Rapid Amplification of cDNA Ends
  • the primers used for PCR can be disclosed according to the present disclosure ⁇ :
  • the polynucleotide sequence of the present invention The information is appropriately selected and synthesized using conventional methods. Isolation and purification of amplified DNA / RNA fragments can be performed by conventional methods: '5 ⁇ by gel electrophoresis.
  • Polynucleotide sequences of the gene of the present invention obtained as described above, or various DNA fragments, etc. can be determined by conventional methods such as dideoxy chain termination: 3 ⁇ 4 (Sanger et al. PNAS, 1977, 74: 5463-5467). Such assays also commercially polynucleotide sequences:: the Sequencing Kit and the like. In order to obtain the full-length cDNA sequence, sequencing must be repeated. Sometimes the cDNA sequence of multiple A clones is needed to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using the human ribosomal S7 protein 16 silk sequence, and the recombinant technology to produce the polypeptide described in the present invention.
  • Party: ' ⁇ In the present invention, a polynucleotide sequence encoding a human ribosomal S7 protein lb may be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Rosenberg, et al. Gene, 1987, 56: 125) expressed in bacteria; pMSXND expression vectors expressed in mammalian cells ( Lee and Nathans, J Bio Chem. 263: 3521, 1988) and baculovirus-derived vectors expressed in insect cells.
  • any plasmid and vector can be used to construct recombinant expression vectors.
  • An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
  • the expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DN'A expression, usually about 10 to 300 base pairs, and act on promoters to enhance gene transcription. Examples of Gong include the SV40 enhancer of 100 to 270 base pairs at the late stage of the origin of replication, the polyoma enhancer and the adenovirus enhancer at the late side of the origin of replication.
  • the expression vector preferably contains one A or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase for eukaryotic cell culture, neomycin resistance, and Green fluorescent protein (GFP), or tetracycline or ampicillin against Enterobacteriaceae.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase for eukaryotic cell culture, neomycin resistance, and Green fluorescent protein (GFP), or tetracycline or ampicillin against Enterobacteriaceae.
  • a polynucleotide encoding a human ribosome S7 protein 16 or a recombinant vector containing the polynucleoside can transform or transduce a host cell into a base-engineered host cell containing the polynucleotide or the recombinant vector.
  • the term "primary cell” refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell: or a higher eukaryotic cell.
  • Streptomyces bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as fly flies S2 or Sf9; animal cells such as CH0, COS or Bowes melanoma cells.
  • 3 ⁇ 4 Transformation of a host cell by the DNA sequence of the present invention or a recombinant vector containing the DNA sequence can be performed by conventional techniques well known to those skilled in the art.
  • the host is a prokaryote, such as E. coli
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with the Ca 2 method. The steps used are well known in the art. Alternatively, MgCl 2 is used. If necessary, transformation can also be performed by electroporation.
  • the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
  • the polynucleotide sequence of the present invention can be used to express or produce recombinant 3 ⁇ 4 human ribosome S7 protein 16 (Science, 1984; 224: 1431). Generally there are the following steps:
  • the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • a suitable method such as temperature conversion or chemical induction
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted into a cell: if necessary, its physical and chemical properties may be used to isolate and purify the recombinant by various separation methods Of protein.
  • these methods include but are not limited to: conventional renaturation treatment, protein precipitant treatment (3 ⁇ 4 analysis method), centrifugation, osmotic bacteria treatment, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography , Ion exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (3 ⁇ 4 analysis method)
  • centrifugation osmotic bacteria treatment
  • ultrasonic treatment ultracentrifugation
  • molecular sieve chromatography gel filtration
  • adsorption chromatography Ion exchange chromatography
  • HPLC high performance liquid chromatography
  • 21 is a comparison diagram of gene chip expression profiles of the present human ribosomal S 7 protein 16 and human ribosomal S 7 protein 9.
  • the second figure is the expression profile of the human ribosome S7 protein 16.
  • the figure is the expression profile of the human ribosome S7 protein 9.
  • 1 indicates fetal kidney
  • 2 indicates fetal size ⁇ .
  • 3 indicates ⁇ small intestine
  • 4 indicates fetal muscle
  • 5 indicates brain.
  • 63 ⁇ 4 indicates fetal bladder
  • 7 indicates non-starved L02
  • As 9 indicates ECV304 PMA-.
  • 10 means ECV304 PMA +
  • 11 means fetal liver
  • 12 means normal liver
  • 13 means thyroid
  • 14 means skin
  • 16 means lung
  • 17 means lung cancer
  • 18 means fetal spleen
  • 19 means spleen
  • 20 means prostate
  • 21 is the fetal heart
  • 22 is the heart
  • 23 is the muscle
  • 24 is the testis
  • 25 is the fetal thymus
  • 26 is the thymus.
  • S 2 is a polyacrylamide gel electrophoresis image (SDS-PAGE) of isolated human nuclear sperm S7 protein 16.
  • 16kDa is the molecular weight of the protein.
  • the arrow indicates the isolated protein band.
  • the determined c DNA sequence was compared with the public DNA word 'f' and 'Database' (Genebank). As a result, one of the clones 0138 a 0 ⁇ c DN A word 'was found: a new sequence of 1
  • the cloned c DN A fragment was cloned for orientation determination.
  • the 0138a06 clone contains a full-length cDNA of 2533bp (as shown in Seq ID NO: 1). There is a 428bp open reading frame (0RF) from 801bp to 1229bp. It encodes a new protein (such as Seq ID NO: 2).
  • This clone pBS-0138a06 was named the encoded protein.
  • Heliosome S7 protein 16 Implemented column 2: RT-PCR method was used to expand the base encoding human ribosomal S7 protein 16
  • RNA of brain cells was used as a template, and oligo-dT was used as a primer to perform reverse transcription reaction to synthesize cDNA. After purification with Qiagene kit, the primers were used for PCR amplification:
  • Primerl 5'- GACAACAGAAATTTCAGTTATTAT -3 "(SEQ ID N0: 3)
  • Primer2 f- TATGTATAAGGTAAAGTATATTTA _3 ⁇ (SEQ ID NO: 4)
  • Primerl is a forward sequence starting from the 1st lbp at the 5 ′ end of SEQ ID NO: 1;
  • Primer2 is the 3 'end reverse sequence in SEQ ID NO: 1.
  • Conditions for the amplification reaction 50 mmol / L t (Cl, 10 cryptool / L Tris-CI, (pH 8.5), 1.5 mmol / L MgCI 2 , 200 ⁇ mol / L dNTP in a reaction volume of 50 ⁇ 1 , lOpmol primer, 1U of Taq DNA polymerase (product of Clomech).
  • the reaction was performed on a PE9600 DNA thermal cycler (Perkin-Eimer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min. Set ⁇ -act in as a positive control and template blank as a negative control at the same time during RT-PCR.
  • This method involves acid guanidinium thiocyanate phenol-chloroform extraction. That is, the tissue is homogenized with 4 guanidine cyanocyanate-25m sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1) are added. ) And centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water.
  • RNA was synthesized by electrophoresis on a 1.2% agarose gel containing 20 mM 3- (N-morpholino) propanesulfonic acid (pH 7. Q)-5 mM sodium acetate-1 miM EDTA-2.2 M formaldehyde. It was then transferred to a nitrocellulose membrane.
  • the DNA probe used was the sequence of the human ribosome S7 protein 16 coding region (801bp to 1229bp) amplified by PCR shown in FIG. 1.
  • a 32P-labeled probe (approximately 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 (> C overnight in a solution containing 50 3 ⁇ 4 formamide-25 m ⁇ , ⁇ ( ⁇ 7.4) -5 SSC-5 Denhardt's solution and 200 yg / ml salmon sperm DNA. After hybridization, the filter was washed in 1 x SSC-0.13 ⁇ 4SDS for 30 min. Then, it was analyzed and quantified by Phosphor Imager.
  • Example 4 In vitro expression, isolation and purification of recombinant human ribosomal S7 protein 16
  • Primer3 5 *-CATGCTAGCATGACTAGAACTAAAACAGTAAAT -3 '(Seq ID No: 5)
  • Primer4 5'- CATGGATCCCTATTGTAACGTTGTTAGTAGTTC -3 "(Seq ID No: 6)
  • the 5' ends of these two primers contain Nhel and BamHI restriction sites, respectively. 5 'end of target gene
  • Nhe I and BamH I were used to double digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase.
  • the ligation product was transformed into coliform bacteria DH5 CC using the calcium chloride method. After being cultured overnight on LB plates containing kanamycin (final concentration 30 g / ml), positive clones were selected by colony PCR method and sequenced. A positive clone (pET-0138a06) with the correct sequence was selected, and the recombinant plasmid was transformed into E.
  • coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method.
  • host strain BL21 P ET-0138a06
  • IPTG was added to a final concentration of lmmol / L , Continue to cultivate for 5 hours.
  • the bacteria were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. Chromatography was performed using an affinity chromatography column His. Bind Quick Cartridge! Novagen company product capable of binding to 6 histidines (6His-Tag).
  • a purified g protein of human ribosomal S7 protein 16 was obtained. After SDS-PAGE electrophoresis, a single band was obtained at 16 kDa (Fig. 2). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by Edams hydrolysis method. The N-terminal 15 amino acid residues shown in NO: 2 are identical.
  • Example 5 Production of anti-human ribosomal S7 protein 16 antibodies
  • a peptide synthesizer (product of PE company) was used to combine the peptides specific for the human nucleus S7 protein 16: NH2-Me t-Thr-Arg-Thr-Ly s-Thr-Va 1-Asn-Leu-As p -Asn-11 e-Lys-Pro-G 1 n- C00H (SEQ ID NO: 7).
  • the polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively.
  • the suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways.
  • the probes can be used to hybridize to genomic or cDNA libraries from different tissues of royal or pathological tissues. and s columns identified polynucleotide sequences homologous to the polynucleotide carrier detected if it contains the present invention, further into a ho This probe is used to detect whether the polynucleotide sequence of the present invention or its homologous polynucleotide sequence is abnormally expressed in cells of normal tissue or pathological tissue.
  • the purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method.
  • Filter hybridization methods include dot blotting, Southern imprinting, Northern blotting, and copying methods. They all use the same steps to immobilize the polynucleotide sample to be tested on the filter.
  • the sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer.
  • the pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid.
  • the unhybridized probes are removed by a series of membrane washing steps.
  • This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals.
  • the probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention
  • the polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment.
  • the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
  • the probe is large :: preferably 18-50 nucleotides
  • preliminary selection probes Those that meet the above conditions can be used as preliminary selection probes, and then further computer sequence analysis, including the preliminary selection ⁇ its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and Compare the homology of the regions with each other. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used generally
  • Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41 t):
  • probe2 which belongs to the second class of probes, and belongs to the gene fragment of SEQ ID NO: 1 Or its complementary mutant substitution sequence (41Nt):
  • PBS phosphate buffered saline
  • step 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
  • NC membrane nitric acid membrane
  • Pre-hybridization Place the sample in a plastic bag, add eight 3-1 Omg pre-hybridization solution (lOxDenhardf s; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).), Seal the bag, and shake at 68 ° C in a water bath 2 hours.
  • 3-1 Omg pre-hybridization solution lOxDenhardf s; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).
  • probe 1 can be used to qualitatively and quantitatively analyze the presence and differential expression of the polynucleotide of the present invention in different tissues.
  • Gene microarrays or DNA microarrays are new technologies currently being developed by many national laboratories and large pharmaceutical companies. They refer to the orderly and high-density arrangement of a large number of target gene fragments in a glass. And tritium, and then use fluorescence detection and computer software to compare and analyze the data, so as to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information.
  • the polynucleotide of the present invention can be used as a target DNA two-gene chip technology to study the function of new genes with two high-throughputs: find and screen for tissue specificity New genes, especially those related to diseases such as tumors; Diagnosis of diseases, such as hereditary diseases. The specific method steps have been reported in the literature.
  • a total of 4,000 polynucleotide sequences of various full-length cDNAs are used as target DNA, including the polynucleotides of the present invention. They were respectively amplified by PCR. After purification, the concentration of the amplified product was adjusted to about 500 ng / ul, and spotted on a sloped glass medium using a Cartesian 7500 spotter (purchased from Cartesian, USA) between the points. The distance is 280 ⁇ ⁇ ⁇ . The spotted slides were hydrated, dried, and cross-linked in a UV cross-linker. After elution, the slides were fixed to fix the DNA on the glass slides to prepare chips. The specific method steps have been variously reported in the literature. The post-spot processing steps of this embodiment are:
  • niRNA was extracted from human tissues and specific tissues (or stimulated cell lines) in one step, and mRNA was purified using Oligotex mRNA Midi Kit (purchased from QiaGen).
  • Cy3dUTP (5-Amino-propargy 1-2 '-deoxyur id ine 5 -triphate coupled to Cy3 fluorescent dye, purchased from Amersham Phamacia Biotech) was used to label the niRNA of human mixed tissue, and the fluorescent reagent CySdUTP (5-Amino-propargy 1- 2- -deoxyur id ine 5'-tr iphate coupled to Cy5 fluorescent dye, from Amersham Phamacia Biotech company) marker specific tissue (or stimulated cell line) niRNA, and probes were prepared after purification.
  • Cy3dUTP (5-Amino-propargy 1-2 '-deoxyur id ine 5 -triphate coupled to Cy3 fluorescent dye, purchased from Amersham Phamacia Bio
  • the above specific tissues are thymus, testis, muscle, spleen, lung, skin, thyroid, liver, PMA + Ecv304 cell line, PMA-Ecv304 cell line, non-starved L02 cell line, L02 cell line stimulated by arsenic for 1 hour, L02 cell line stimulated by arsenic for 6 hours prostate, heart, lung cancer, fetal bladder, fetal small intestine, fetal large intestine, thymus, fetal muscle, fetal liver, fetal kidney, fetal spleen, fetal brain Fetal lung and fetal heart.
  • polypeptides of the present invention can be directly used in the treatment of diseases, for example, they can treat malignant tumors, adrenal deficiency, skin diseases, various types of inflammation, HIV infection, and immune diseases.
  • Ribosomal protein S7 is one of the proteins in the small subunit of the ribosome: it plays a very important role in the correct tRNA selection in the initial stages of protein synthesis. The S7 protein can select the correct tRNA to bind to small ribosomal subunits to avoid mismatches, which is directly related to the stability of the passage of the organism. And the loss of ribosomal protein will slow down the growth of cells.
  • the abnormal expression of the specific S7 family protein motif will cause the dysfunction of the polypeptide containing the S7 family protein mot if of the present invention, resulting in the mistranslation of mRNA and the generation of related diseases such as tumors, embryonic development disorders, Growth and development disorders.
  • the abnormal expression of the human ribosomal S7 protein 16 of the present invention will produce various diseases, especially embryonic developmental disorders, growth and development disorders, various tumors, and inflammations. These diseases include, but are not limited to:
  • Embryonic developmental disorders congenital 'mainstream births, cleft palate, facial oblique fissures, limb absentness, limb differentiation disorders, gastrointestinal atresia or stenosis, diarrhea, atelectasis, polycystic kidney, ectopic kidney, double ureter, Recessive, congenital inguinal hernia, double uterus, vaginal atresia, hypospadias, hermaphroditism, atrial septal defect, ventricular septal defect, arterial stenosis, arterial duct occlusion, neural tube defect, congenital hydrocephalus, iris Defects, congenital cataract, congenital glaucoma or cataract, congenital deafness
  • Growth and development disorders mental retardation, cerebral palsy, brain development disorders, mental retardation, familial cerebral nucleus development syndrome, strabismus, skin, fat, and muscular dysplasia disorders such as congenital skin relaxation, ⁇ Oldness, congenital keratosis, various metabolic defects such as various amino acid metabolic defects, stunting, dwarfism, sexual retardation
  • Tumors of various tissues gastric cancer, liver cancer, lung cancer, esophageal cancer, breast cancer, leukemia, lymphoma, thyroid tumor, uterine fibroids, neuroblastoma, astrocytoma, ependymoma, glioblastoma, Colon cancer, malignant histiocytosis, bladder cancer, bone cancer, osteosarcoma, myeloma, bone marrow cancer, brain cancer, uterine cancer, endometrial cancer, cholecystoma, colon cancer, thymic tumor, nasal cavity and sinus tumor, nose Pharyngeal cancer, Laryngeal cancer, Tracheal tumor, Pleural mesothelioma, Fibroid, Fibrosarcoma, Lipoma, Liposarcoma, Leiomyoma
  • the abnormal expression of the human ribosomal S7 protein 16 of the present invention will also produce certain hereditary, hematological and immune system diseases.
  • the invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) human ribosomal S7 protein 16.
  • Agonists increase human ribosomal S7 protein 16 to stimulate biological functions such as cell proliferation, while antagonists block 11 to treat disorders related to excessive cell proliferation, such as various cancers.
  • mammalian cells or formulations expressing human ribosomal S7 protein 16 are cultured with labeled human ribosome S7 protein 16. The ability of a given drug to increase or block this interaction is then determined.
  • Antagonists of human ribosomal S7 protein 16 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human ribosomal protein 16 can bind to human ribosomal S7 protein 16 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot perform biological functions.
  • human ribosomal S7 protein 16 When screening compounds as antagonists, human ribosomal S7 protein 16 can be added to bioanalytical assays. Whether a compound is an antagonist can be determined by measuring the effect of the compound on the interaction between human ribosome S7 protein 16 and its receptor . In the same manner as described above for screening compounds, analogues of receptor deletions that act as antagonists can be screened. Polynucleotides capable of binding to human ribosomal S7 protein 16 can be obtained by screening random peptides composed of various possible amino acids bound to solids. Generally, human nuclear ⁇ S7 protein 16 should be screened.
  • the present invention provides a method for producing an antibody using a polypeptide, a fragment, a derivative, an analog thereof, or a cell thereof as an antigen.
  • These antibodies can be polyclonal or monoclonal antibodies.
  • the invention also provides antibodies against the human ribosomal S7 protein 16 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
  • Polyclonal antibodies can be produced by injecting human ribosomal S7 protein 16 directly into immunized animals (such as rabbits, mice, rats, etc.).
  • immunized animals such as rabbits, mice, rats, etc.
  • a variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's adjuvant. Wait.
  • Techniques for preparing monoclonal antibodies to human ribosomal S7 protein 16 include, but are not limited to, hybridoma technology (Kohler and Milstein. Nature, 1975, 256: 495-497), triple tumor technology, human B-cell hybridoma technology, EBV -Hybridoma technology, etc.
  • Chimeric antibodies that bind human constant regions to non-human variable regions can be produced using existing techniques (Morrison et ai, PNAS, 1985, 81: 6851). 0 Existing techniques for producing single-chain antibodies (US Pat No. .4946778). Single-chain antibodies against human ribosomal S7 protein 16 can be produced using two.
  • Antibodies against human ribosomal S7 protein 16 can be used in immunohistochemical techniques to detect human ribosomal S7 protein 16 in biopsy specimens.
  • Monoclonals that bind to human ribosomal S7 protein 16 can also be labeled with radioisotopes and injected into the body to track their location and distribution.
  • This radioactive: bio-labeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
  • Antibodies can also be used to design immunotoxins that target a particular but in situ body.
  • human ribosomal S7 protein 16 high-affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.).
  • a common method is an S thiol crosslinker such as SPDP, which attacks the amino group of an antibody and binds the toxin to the antibody through the exchange of disulfide bonds.
  • SPDP S thiol crosslinker
  • This hybrid antibody can be used to kill human ribosome S7 protein 16 positive cells .
  • the antibodies in the present invention can be used to treat or predict diseases related to human ribosomal S7 protein 16.
  • Administration of an appropriate dose of antibody can stimulate or block the production or activity of human ribosomal S7 protein 16.
  • the invention also relates to a diagnostic test method for quantitative and localized detection of human sugar S7 protein 16 levels. These tests are well known in the art and include FISH: determination and radioimmunoassay.
  • FISH determination and radioimmunoassay.
  • the level of human ribosomal S7 protein 16 detected in the test can be used to explain the importance of human ribosome S7 protein 16 in various diseases and to diagnose human ribosome S7 protein 16 and other diseases.
  • the peptides of the present invention can also be used as spectral spectra.
  • Mi-- Polypeptides can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, preferably mass spectrometry analysis.
  • the polynucleotide encoding human ribosomal S7 protein 16 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of human ribosomal S7 protein 16.
  • Recombinant gene therapy vectors can be designed to express mutated human ribosome S7 protein 16 to inhibit endogenous human ribosome S7 protein 16 activity.
  • a variant human ribosome S7 protein 16 may be a shortened human ribosome S7 protein 16 that lacks a signaling domain. Although it can bind to downstream substrates, it lacks signaling activity. Therefore, the recombinant gene therapy vector can be used to treat diseases caused by abnormal expression or activity of human ribosomal S7 protein 16.
  • Virus-derived expression vectors 1 ⁇ 2 retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc.
  • a recombinant polynucleotide encoding human ribosomal S7 protein 16 can be packaged into liposomes and transferred into cells.
  • Methods for introducing polynucleotides into tissues or cells include: directly injecting the polynucleotides into tissues in vivo; or introducing the polynucleotides into cells in vitro through a vector (such as a virus, phage, or plasmid), and then introducing the cells Transplanted into the body, etc.
  • a vector such as a virus, phage, or plasmid
  • Oligonucleotides including antisense RNA and DNA
  • ribozymes that inhibit human ribosomal S7 protein 16 mRNA are also within the scope of the present invention.
  • a ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation.
  • Antisense RNA, DNA, and ribozymes can be obtained using any existing RNA or DNA synthesis technology, such as the solid-phase phosphoramidite chemical synthesis method for oligonucleotide synthesis.
  • Antisense RNA molecules can be transcribed outside or in vivo by DNA sequences encoding the RNA.
  • This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter.
  • it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphorothioate or peptide bonds instead of phosphodiester bonds.
  • Polynucleosides encoding human ribosomal S7 protein 16 can be used for the diagnosis of diseases related to human ribosome S7 protein 16.
  • the polynucleotide encoding human ribosomal S7 protein 16 can be used to detect the expression of human ribosome S7 protein 16 or the abnormal expression of human ribosome S7 protein 16 in a disease state.
  • the DNA sequence encoding human ribosomal S7 protein 16 can be used to hybridize biopsy specimens to determine the expression status of human ribosome S7 protein 16.
  • Hybridization techniques include Southern blotting, Northern blotting, in situ hybridization, and so on. These techniques and methods are publicly available and mature, and related kits are commercially available.
  • a part or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray (Microarray) or a DNA core (also known as a "base S core"). Differential expression of genes in tissues can be analyzed by tritium analysis and gene diagnosis .
  • Human ribosomal S7 protein 16 specific primers can be used for RNA-polymerase chain reaction (RT-PCR) in vitro amplification to detect human ribosomal S7 protein 16 transcription products.
  • Detection of mutations in the human ribosomal S7 protein 16 gene can also be used to diagnose human ribosome S7 protein 16-related diseases.
  • Human ribosome S7 protein 16 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human ribosome S7 protein 16 DNA sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR, and in situ hybridization. In addition, mutations may affect the expression of proteins, so Northern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
  • the sequences of the invention are also valuable for chromosome identification.
  • the sequence specifically targets a specific position on a human chromosome and can hybridize to it.
  • specific sites for each gene on the chromosome need to be identified.
  • only a few chromosome markers based on actual sequence data are available for marking chromosome positions. According to this article, in order to associate these sequences with disease-related genes, the important first step is to locate these DNA sequences on the chromosome.
  • PCR primers (preferably 15-35bp) can be used to prepare sequences based on cDNA, which can be used to locate sequences on chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes.
  • oligonucleotide primers of the present invention in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
  • the c D N A clone was subjected to fluorescence in situ hybridization (F I S H) with the metaphase chromosome.
  • F I S H fluorescence in situ hybridization
  • the chromosome localization can be accurately performed in a step A.
  • the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendel ian Inheritance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
  • the differences in cDNA or genomic sequence between the affected and unaffected individuals need to be determined. If a mutation is observed in some or some patients, and the mutation is not observed in any normal eight body, then the mutation may be a disease of the disease: 1K is more diseased and not diseased, usually, : 'Step and first look for staining Structural changes in the body, such as deletions or translocations that are visible from the chromosomal level or detectable with c DNA sequence-based PCR.
  • the cDNA accurately mapped to the disease-related chromosomal region can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase Figure resolution and each 20kb corresponds to a gene).
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • these containers there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell.
  • the polypeptides of the invention can be used in combination with other therapeutic compounds.
  • the pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration.
  • Human ribosomal S 7 protein 16 is administered in an amount effective to treat and / or prevent a specific indication.
  • the amount and range of human ribosomal S 7 protein 16 to be administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician

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Abstract

The present invention discloses a novel polypeptide, a human ribosome S7 protein 16, the polynucleotide encoding the polypeptide and the method for producing the polypeptide by DNA recombinant technology. The invention also discloses the uses of the polypeptide in methods for treating various diseases, such as malignant tumour, hemopathy, HIV infection, immunological disease, and various inflammations, etc. The invention also discloses the agonists against the polypeptide and the therapeutic action thereof. The invention also discloses the uses of the polynucleotide encoding the novel human ribosome S7 protein 16.

Description

一种新的多肽一一人核糖体 S7蛋白 16和编码这种多肽的多核苷酸 技术领域  A new polypeptide-human ribosomal S7 protein 16 and a polynucleotide encoding the polypeptide TECHNICAL FIELD
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽一一人 核糖体 S7 蛋白 16, 以及编码此多肽的多核苷酸序列。 本发明还涉及此多核苷 酸和多肽的制备方法和应用。 背景技术  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide—a human ribosomal S7 protein 16, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and polypeptide. Background technique
蛋白的正确翻译对所有细菌及高等生物都是非常重要的, 对蛋白翻译调控 机制的研究是从大肠杆菌中得到的。 蛋白的翻译过程主要由各种氨酰基 -tRNA 合成酶、 各种 tRNA 及核糖体共同作用来完成, 其中核糖体和其他辅助因子在 一起提供了 译过程的全 ^酶活性, 这些酶活性只有在核糖体整体结抅完整的 情况下才会具备。 因而, 核糖体及其组成的各亚单位在生物体内协同作用, 起 着重要的生理学功能。  The correct translation of proteins is very important for all bacteria and higher organisms. The research on the regulation mechanism of protein translation is obtained from E. coli. The protein translation process is mainly completed by various aminoacyl-tRNA synthetases, various tRNAs, and ribosomes. The ribosome and other cofactors together provide the full enzymatic activity of the translation process. Ribosomes are only available if the entire crust is intact. Therefore, the ribosome and its constituent subunits act synergistically in the body and play an important physiological function.
核糖体是合成蛋白质的细胞器, 其唯一功能是按照 mRNA 的指令由氨基酸 合成多肽链, 它被称为核糖核蛋白体, 简称为核蛋白体或核糖体。 核糖体几乎 存在于一切细胞内, 无论原核还是真核细胞, 均有大量的核糖体存在。 核糖体 是一种颗粒状结构, 没有膜包裹, 其直径为 25nm, 主要成分为蛋白质和 RNA, 核糖体 RNA称为 rRNA, 蛋白质含量约占 40%, RM约占 60%。 蛋白质分子主要分 布在核糖体的表面, 而 rRNA 则位于内部, 两者靠非共价键结合在一起。 (细 胞生物学 S中和 高等教育出版社 PP122-129 ) 核糖体的功能研究将焦点 放到了核糖体 R 'A上,有很多 rRNA功能域决定着核糖体的不同功能。( Annu Rev Biochem 1991; 60 191-227 )  Ribosomes are organelles that synthesize proteins. Their sole function is to synthesize polypeptide chains from amino acids in accordance with the instructions of mRNA. It is called ribosome, and is simply called ribosome or ribosome. Ribosomes are found in almost all cells, whether in prokaryotic or eukaryotic cells, there are a large number of ribosomes. The ribosome is a granular structure without a membrane. Its diameter is 25 nm. The main components are protein and RNA. Ribosomal RNA is called rRNA. The protein content is about 40% and RM is about 60%. Protein molecules are mainly distributed on the surface of the ribosome, while rRNA is located inside, and the two are bound together by non-covalent bonds. (Cell Biology Szhonghe Higher Education Press PP122-129) The function of ribosomes has focused on the ribosome R'A. There are many rRNA functional domains that determine different functions of the ribosome. (Annu Rev Biochem 1991; 60 191-227)
生物有机体细胞内有两种基本类型的核糖体: 一种是 70S ( S 为 Sverdberg 沉降系数单位) 的核糖体, 所有的原核细胞的核糖体均为 70S 真核细胞线粒体 与叶绿体内的核糖体也近似于 70S。 另一种是 80S 核糖体, 真核细胞的核糖体 (除线粒体与叶绿体核糖体外) 均为 80S。 不论 70S 或 80S 的核糖体, 均由大 小不同的两个亚单位构成。  There are two basic types of ribosomes in biological organism cells: one is a 70S (S is the Sverdberg sedimentation coefficient unit) ribosome, and all prokaryotic cells are 70S ribosomes in eukaryotic cells. Approximately 70S. The other is 80S ribosomes. The ribosomes of eukaryotic cells (except for mitochondria and chloroplast ribose) are 80S. Ribosomes, whether 70S or 80S, are composed of two subunits of different sizes.
核糖体大小亚单位在细胞内常常游离于细胞质基质中, 只有当小亚单位与 mRNA 结合后大亚单位才与小亚单位结合形成完整的核糖体。 肽链合成终止后, 大小亚单位解离, 又游离存在于细胞质基质中。  The ribosome size subunits are often free in the cytoplasmic matrix within the cell. Only when the small subunits are combined with mRNA do the large subunits bind to the small subunits to form a complete ribosome. After the peptide synthesis is terminated, the large and small subunits dissociate and then exist freely in the cytoplasmic matrix.
S7 是核糖体小亚单位的结合蛋白之一, 它和同源蛋白存在于绝大多数原核 生物和真核生物细胞内。 S7 is one of the small subunits of ribosomal binding protein, and it exists in most prokaryotic cells with homologous proteins Biological and eukaryotic cells.
所有的核糖体蛋曰 S7的 N末端均含有一保守的区域, 该区域含有以下一致 的序 列 片 段: [DENSK]- X- [LIVMET]— X (3) [LIVMFT] (2) -χ (6) -G- - [KR] -χ (5)- [LIVMF]-[LIVMFC]-x(2)-[STA]。 在众多不同生物的核糖体蛋白 S 7中均含有这一 序列片段, 这一保守的结构基序对于核糖体蛋白 S7与核糖体 RNA的结合过程有 重要的意义, 该片段可能对核糖体发挥正常生理学功能起重要的调控作用。  All ribosomal eggs contain a conserved region at the N-terminus of S7, which contains the following consensus sequence fragments: [DENSK]-X- [LIVMET] — X (3) [LIVMFT] (2) -χ (6 ) -G--[KR] -χ (5)-[LIVMF]-[LIVMFC] -x (2)-[STA]. This sequence fragment is contained in ribosomal protein S7 in many different organisms. This conserved structural motif is of great significance for the binding process of ribosomal protein S7 and ribosomal RNA, and this fragment may play a normal role in ribosomes. Physiological functions play an important regulatory role.
根据对大肠杆菌核糖体蛋白 S7 的研究, 证明核糖体蛋白 S7 可以直接结合 于 16S核糖体 RNA的 3' 末端。  According to the study of E. coli ribosomal protein S7, it was proved that ribosomal protein S7 can directly bind to the 3 'end of 16S ribosomal RNA.
核糖体蛋白 S7 对于蛋白质的翻译过程有着重要的作用, 如果缺失或对其 进行化学修饰, 或编码它的基因发生突变, 都会影响核糖体的功能, 降低多肽 合成的活性。 虽然, 对核糖体蛋白 S7 的功能研究还不够透彻, 但根据种种研 究结果, 可以证明, 核糖体蛋白 S7 的功能包括: ( 1 ) 对 rRNA 折叠成有功能 的三维结构是十分重要的; ( 2 ) 在蛋白质合成中, 核糖体的空间构象发生一 系列的变化, 核糖体 白可能对核糖本的构象起 "微调" 作用; ( 3 ) 在核糖 体的结合位点上甚至可能在催化作用中, 核糖体蛋白与 rRNA共同行使功能。  Ribosomal protein S7 plays an important role in the translation process of proteins. If it is deleted or chemically modified, or the gene encoding it is mutated, it will affect the function of ribosomes and reduce the activity of peptide synthesis. Although the research on the function of ribosomal protein S7 is not thorough enough, according to various research results, it can be proved that the functions of ribosomal protein S7 include: (1) It is very important for rRNA to fold into a functional three-dimensional structure; (2 ) In protein synthesis, the spatial conformation of the ribosome undergoes a series of changes, and ribosomal white may play a "fine-tuning" role in the conformation of the ribosome; (3) it may even play a catalytic role in the ribosome binding site, Ribosome proteins work together with rRNA.
根据核糖体蛋白 S7 的序列相似性, 认为其属于核糖体蛋白家族。 该蛋白 缺失将导致细胞生长速度减慢 [】■ Stephen Gantt, Michael D. Thompson, 1990, J. Biol. Chem. , 265: 2763-2767] 0 因而, 核糖体蛋白 S7在由 DNA 转录、 翻译 的细胞增殖过程中起着极为重要的作用。 其表达异常将导致组织的生长速度减 慢, 从而引发各种发育紊乱性疾病, 如发育迟缓等。 Based on the sequence similarity of ribosomal protein S7, it is considered to belong to the ribosomal protein family. Deletion of this protein will slow down cell growth [] ■ Stephen Gantt, Michael D. Thompson, 1990, J. Biol. Chem., 265: 2763-2767] 0 Therefore, ribosomal protein S7 is transcribed and translated from DNA It plays an extremely important role in cell proliferation. Its abnormal expression will cause the growth rate of the tissue to slow down, which will cause various developmental disorders, such as stunting.
通过基因芯片的分^发现, 在胸腺、 睾丸、 肌肉、 脾脏、 肺、 皮肤、 田状 腺、 盱、 PMA+的 Ecv304细胞株、 PMA -的 Ecv304细胞株、 未饥饿的 L02细胞株、 砷刺激 1 小时的 L02 细胞株、 砷刺激 6小时的 L02 细胞株前列腺、 心、 肺癌、 胎膀胱、 胎小肠、 胎大肠、 胎胸腺、 ½肌、 胎肝、 胎肾、 胎脾、 胎脑、 胎肺以 及胎心中, 本发明的多 ¾的表达谱与人核糖体 S7 蛋白 9 的表达谱非常近似, S此二者功能也可能类似。 本发明被命名为人核糖体 S7蛋白 16。  According to the analysis of the gene chip, it was found that in the thymus, testis, muscle, spleen, lung, skin, gonad, salamander, PMA + Ecv304 cell line, PMA-Ecv304 cell line, non-starved L02 cell line, arsenic stimulation 1 L02 cell line for 6 hours, L02 cell line stimulated for 6 hours for prostate, heart, lung cancer, fetal bladder, fetal small intestine, fetal large intestine, fetal thymus, ½ muscle, fetal liver, fetal kidney, fetal spleen, fetal brain, fetal lung, and In the fetal heart, the expression profile of the present invention is very similar to the expression profile of human ribosomal S7 protein 9, and the two functions may be similar. The invention is named human ribosomal S7 protein 16.
由于如上所述人核 '晋体 S7 蛋白 16 蛋白在调节细胞分裂和, 胎发育等机体 重要功能中起重要作用, 而且相信这些调节过程中涉及大量的蛋白, 因而本领 域中一直需要鉴定更多参与这些过程的人核糖体 S7 蛋白 16 蛋白, 特别是鉴定 这种蛋白的氨基酸序列 新人核糖体 S7 蛋白 16 蛋白编码基因的分离也为研究 5 定该蛋白在健康和疾病状态下的作用提供了基础。 这种蛋白可能构戍开发疾 1 病诊断和 /或治疗药的基础. 21此分离其编码 DNA是非常重要的。 发明的公开 As mentioned above, the human nuclear S7 protein 16 protein plays an important role in regulating important functions of the body such as cell division and fetal development, and it is believed that a large number of proteins are involved in these regulatory processes, so more needs to be identified in the field. The human ribosomal S7 protein 16 protein involved in these processes, especially the identification of the amino acid sequence of this protein. The isolation of the new human ribosome S7 protein 16 protein encoding gene also provides a basis for studying the role of this protein in health and disease states. . This protein may form the basis for the development of diagnostic and / or therapeutic agents for the disease. 21 It is important to isolate its coding DNA. Disclosure of invention
本发明的一个目的是提供分离的新的多肽一一人核糖体 S7 蛋白 16 以及其 片段、 类似物和衍生物。  It is an object of the present invention to provide isolated new polypeptides-human ribosomal S7 protein 16 and fragments, analogs and derivatives thereof.
本^明 έ÷另一个目的是提供编码该多肽的多核苷酸。  The present invention also provides a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码人核 体 S7 蛋白 16 的多核苷酸的重 组载体。  Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding a human nucleosome S7 protein 16.
本发明的另一个目的是提供含有编码人核糖体 S7 蛋白 16 的多核苷酸的基 因工程化宿主细胞。  Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding a human ribosome S7 protein 16.
本发明的另一个目的是提供生产人核糖体 S7蛋白 16的方法。  Another object of the present invention is to provide a method for producing human ribosomal S7 protein 16.
本发明的另一个目的是提供针对本发明的多肽一一人核糖体 S7 蛋白 16 的 抗体。  Another object of the present invention is to provide an antibody against the polypeptide-human ribosomal S7 protein 16 of the present invention.
本^明 ^另一个目的是提供了针对本发明多钛一一人核糖体 S7蛋白 16的模 拟化合物、 抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors of the polytitanium-human ribosomal S7 protein 16 of the present invention.
本发明 另一个目的是提供诊断治疗与人核糖体 S7 蛋白 16 异常相关的疾 病的方法。  Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of human ribosomal S7 protein 16.
本发明;步及一种分离的多肽, 该多肽是人: 的, 它包含: 具有 SEQ ID No. 2 氨基酸序列^多肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该多 肽是具有 SEQ ID NO: 2氨基酸序列的多肽。  The invention includes a step and an isolated polypeptide, the polypeptide is human: it includes: a polypeptide having the amino acid sequence of SEQ ID No. 2 or a conservative variant, biologically active fragment or derivative thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或 其变体:  The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编 ί÷具有 SEQ ID No. 2氨基酸序列的多 ¾的多核苷酸; (a ) a polynucleotide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸;  (b) a polynucleotide complementary to polynucleotide (a);
(c)与( a )或(b)的多核苷酸序列具有至少 70 相同性的多核苷酸。  (c) A polynucleotide having at least 70 identity to a polynucleotide sequence of (a) or (b).
更佳地. 该多核苷酸的序列是选自 " ^组^一种: (a)具有 SEQ ID NO: 1 中 80卜 122<ΜΞΞ?序列; 禾口(b)具有 SEQ ID NO: i - 1-2533位的序列;  More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence of SEQ ID NO: 1 with a sequence of 80 and 122 <MΞΞ ?; and (b) a sequence with SEQ ID NO: i- A sequence of 1-2533 bits;
本发 另外涉及一种含有本发明多核苷¾的载体, 特别是表达载体; 一种 用该载体遗^工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包 括培养所述 主细胞和回收表达产物的制备 ^明多肽的方法。  The present invention further relates to a vector, particularly an expression vector, containing the polynucleoside ¾ of the present invention; a host cell engineered with the vector, including a transformed, transduced or transfected host cell; The method for preparing the main cell and recovering the expressed product is described.
本发 ^ 涉及一种能与本^明多肽特异 结合的抗体。  The present invention relates to an antibody capable of specifically binding to the polypeptide of the present invention.
本发^ ^涉及一种筛选的模拟、 激活、 抗或抑制人核糖体 S7蛋白 16蛋白 活性的化合 的方法, 其包括利用本 ^ 的多 。 本发明还涉及用该方法获得 的化合物。 本发明还涉及一神体外检测与人核糖体 S 7蛋白 1 6蛋白异常表达相关的疾病 或疾病易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸序列中的 突变. 或者检测生物祥品中本发明多肽的量或生物活性。 The present invention relates to a screening method for mimicking, activating, anti-or inhibiting or inhibiting the activity of the human ribosome S7 protein 16 protein, which includes the use of the present invention. The invention also relates to compounds obtained by this method. The present invention also relates to a method for in vitro detection of diseases or susceptibility to diseases associated with abnormal expression of human ribosomal S 7 protein 16 protein, comprising detecting mutations in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample. Or Detecting the amount or biological activity of the polypeptide of the present invention in a biological product.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮 抗剂或抑制剂以及药学上可接受的载体。  The invention also relates to a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多呔和/或多核苷酸在制备用于治疗癌症、 发育性 疾病或免疫性疾病或其它由于人核糖体 S 7 蛋白 1 6 表达异常所引起疾病的药物 的用途。  The present invention also relates to the use of the polyamidine and / or polynucleotide of the present invention in the preparation of a medicament for treating cancer, developmental disease or immune disease or other diseases caused by abnormal expression of human ribosomal S 7 protein 16.
本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而 易见的。 本说^;书和权利要求书中使用的下列术语除非特别说明具有如下的含义: "核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以 指基因组或合成的 DNA或 RNA, 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部 分。 当本发明中的 "氨基酸序列" 涉及一种天然存在的蛋白质分子的氨基酸序 列时, 这种 "多肽" 或 "蛋白质" 不意味着将氨基酸序列限制为与所述蛋白质 分子相关的完整的天然氨基酸。  Other aspects of the invention will be apparent to those skilled in the art from the disclosure of the techniques herein. The following terms used in this book; and in the claims, unless specifically stated otherwise, have the following meanings: "Nucleic acid sequence" refers to an oligonucleotide, a nucleotide, or a polynucleotide and a fragment or part thereof, and may also refer to the genome Or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide" or "protein" does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变 的氨基酸序列或编 ί 它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸 字列中氨基酸或核苷酸的缺失、 插入或替换。 X体可具有 "保守性" 改变, 其 中替换的氨基酸具有与原氨基酸相类似的结构或化学性质, 如用亮氨酸替换异 亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。  A protein or polynucleotide "variant" refers to an amino acid sequence or a polynucleotide sequence that has one or more amino acids or nucleotide changes. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide string. The X-body may have "conservative" changes, in which the substituted amino acid has similar structural or chemical properties as the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
"缺失" 是指在氨基酸序列或核苷酸序列中一 或多个氨基酸或核苷酸的 缺失  "Deletion" means the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence
"插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存在 的分子相比, 一 或多个氨基酸或核苷酸的增加。 "替换 " 是指由不同的氨基酸或 核苷酸替换一 Α或多 Α氨基酸或核苷酸。  "Insertion" or "addition" means that a change in the amino acid sequence or nucleotide sequence results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more A amino acids or nucleotides by different amino acids or nucleotides.
"生物活 " 是指具有天然分子的结构、 调控或生物化学功能的蛋白质。 类似 地, 术语 "免疫学活 ':·生" 是指天然的、 重组的或合成 白质及其片段在合适的动 物或细胞中诱导特定免疫反应以及与特异性抗体结合的能力。  "Biological activity" refers to proteins that have the structure, regulation, or biochemical function of natural molecules. Similarly, the term "immunological activity :: sheng" refers to the ability of natural, recombinant, or synthetic white matter and fragments thereof to induce a specific immune response in appropriate animals or cells and to bind to specific antibodies.
"激动 'r' 是指当与 ' 亥糖体 S 7蛋白 1 6结 时. 一种可引起该蛋白质改变 从而调节该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水化合物或 任何其它可结合人核糖体 S7蛋白 16的分子。 "Agitated 'r' means when bound to '16 Glycoprotein S 7 protein. One can cause changes in this protein A molecule that regulates the activity of the protein. An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind to human ribosomal S7 protein 16.
"拮抗剂" 或 "抑制物" 是指当与人核糖体 S7蛋白 16结合时, 一种可封闭 或调节人核糖体 S7蛋白 16的生物学活性或免疫学活性的分子。 拮抗剂和抑制物 可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人核糖体 S7蛋白 16的分 子。  An "antagonist" or "inhibitor" refers to a molecule that, when combined with human ribosome S7 protein 16, can block or regulate the biological or immunological activity of human ribosome S7 protein 16. Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that binds human ribosomal S7 protein 16.
"调节" 是指人核糖体 S7蛋白 16的功能发生改变, 包括蛋白质活性的升高 或降低、 结合特性的改变及人核糖体 S7蛋白 16的任何其它生物学性质、 功能或 免疫性质的改变。  "Regulation" refers to a change in the function of human ribosome S7 protein 16, including an increase or decrease in protein activity, a change in binding characteristics, and any other biological, functional, or immune properties of human ribosome S7 protein 16.
"基本上纯' '是指基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域的技术人员能用标准的蛋白质纯化技术纯化人核糖体 S7蛋白 16。 基本上纯 的人核糖体 S7蛋白 16在非还原性聚丙烯酰胺凝胶上能产生单一的主带。 人核糖体 S7蛋白 16多肽的纯度可用氨基酸序列分析。  "Substantially pure '" means substantially free of other proteins, lipids, sugars or other substances with which it is naturally associated. Those skilled in the art can purify human ribosomal S7 protein 16 using standard protein purification techniques. Basically Pure human ribosomal S7 protein 16 can generate a single main band on a non-reducing polyacrylamide gel. The purity of human ribosomal S7 protein 16 polypeptide can be analyzed by amino acid sequence.
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的 多核苷酸天然结合。 例如, 序列 "C-T-G- A" 可与互补的序列 "G- A- C-T" 结合。 两个单链分子之间的互补可以是部分的或全部的。 核酸链之间的互补程度对于 核酸链之间杂交的效率及强度有明显影响。  "Complementary" or "complementary" refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "C-T-G-A" can be combined with the complementary sequence "G-A-C-T". The complementarity between two single-stranded molecules may be partial or complete. The degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指一种部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂 交。 这种杂交的抑制可通过在严格性程度降低的条件下进行杂交 ( Southern印 迹或 Northern^迹等:) 来检测。 基本上同源的序列或杂交探针可竟争和抑制完 全同源的序列与靶序列在的严格性程度降低的条件下的结合。 这并 意味严格 性程度降低的条件允许非特异性结合, 因为严格性程度降低的条件要求两条序 列相互的结合为特异性或选择性相互作用。  "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Northern imprinting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require the binding of two sequences to each other as a specific or selective interaction.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或 相似的百分率 可用 电子方法测定相同性百分率, 如通过 MEGALIGN程序 ( Lasergene software package, DNASTAR, Inc. , Mad i son Wis. ) ; MEGALIGN 程序可根据不同的方法如 Cluster法比较两种或多种序列(Higgins, D. G. 和 P.M. Sharp (1988) Gene 73: 237-244) 0 Cluster法通过检査所有配对之间的距 离将各组序列排列成簇。 然后将各簇以成对或成组分配。 两个氨基酸序列如序 列 A和序列 B之间的相同性百分率通过下式计算: 序列 A与序列 B之间匹 一的残基 A数 "Percent identity" refers to the percentage of sequences that are the same or similar in the comparison of two or more amino acid or nucleic acid sequences. The percentage of identity can be determined electronically, such as through the MEGALIGN program (Lasergene software package, DNASTAR, Inc., Mad Son). Wis.) ; MEGALIGN program can compare two or more sequences according to different methods such as Cluster method (Higgins, DG and PM Sharp (1988) Gene 73: 237-244) 0 Cluster method checks the distance between all pairs The groups of sequences are arranged into clusters. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: Number of residues A matching between sequence A and sequence B
100  100
序列 A的残基数一序列 A中间隔残基数一序列 B中间隔残基数  Number of residues in sequence A-number of interval residues in sequence A-number of interval residues in sequence B
也可以通过 Cluster法或用本领 ¾周知的方法如 Jotun Hein 测定核酸序列 之间的相同性百分率(Hein J. , (1990) Methods in emzumology 183: 625-645)„ The percent identity between nucleic acid sequences can also be determined by the Cluster method or by well-known methods such as Jotun Hein (Hein J., (1990) Methods in emzumology 183: 625-645).
"相似性 " 是指氨基酸序列之: 排列对比时相应位置氨基酸残基的相同或 保守性取代的程度。 用于保守性取代的氨基酸例如, 带负电荷的氨基酸可包括 天冬氨酸和谷氨酸; 带正电荷的氨基羧可包括赖氨酸和精氨酸; 具有不带电荷 的头部基团有相似亲水性的氨基酸 包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨酸 和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨酸和苏氨酸; 苯丙氨酸和酪氨酸。 "Similarity" refers to the degree of amino acid sequence: the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment. Amino acids used for conservative substitutions, for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino carboxyls may include lysine and arginine; have uncharged head groups Amino acids with similar hydrophilicity include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DNA或 RNA^^'j互补的核苷酸序列。 "反义链" 是指 与 "有义链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DNA or RNA ^^ 'j. "Antisense strand" refers to a nucleic acid strand that is complementary to a "sense strand."
"衍生物" 是指 HFP或编码其的 褻的化学修饰物。 这种化学修饰物可以是 用烷基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物 学特性的多肽。  "Derivative" means HFP or a chemical modification that encodes it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 F (ab') 2及 Fv, 其能特异 性结合人核糖体 S 7蛋白 16的抗原决定 。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa, F (ab ') 2 and Fv, which can specifically bind to the antigenic determination of human ribosomal S 7 protein 16.
"人源化抗体" 是指非抗原结会:!域的氨基酸序列被替换变得与人抗体更 为相似, 但仍保留原始结合活性的 体。  "Humanized antibody" means non-antigen binding :! The amino acid sequence of the domain has been replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它 '、¾的环境 (例如, 若是自然产生的就指其 天然环境) 之中移出。 比如说. 一八自然产生的多核苷酸或多肽存在二活动物 中就是没有被分离出来, 但同祥的多¾苷酸或多肽同一些或全部在自然系统中 与之共存的物质分开就是分离的。 ϋ禅的多核苷酸可能是某一载体的一部分, 也可能这样的多核苷酸或多肽是某一组合物的一部分。 既然载体或组合物不是 它天然环境的成分, 它们仍然是分离的。 如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天 然的物质, 原始环境即是天然环境 : 如活体细胞内的天然状态下的多聚核苷 酸和多肽是没有分离纯化的, 但同 的多聚核苷酸或多肽如从天然状态中同存 在的其他物质中分开. 则为分离纯 约。  The term "isolated" refers to the removal of matter from its environment (for example, its natural environment if it occurs naturally). For example, naturally occurring polynucleotides or polypeptides are not isolated in the presence of two living animals, but Tongxiang polyglycosides or peptides are separated from some or all of the substances that coexist in the natural system. of. The polynucleotide of the zenith may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated. As used in the present invention, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment: such as polynucleotides and polypeptides in their natural state in living cells are It is not isolated and purified, but the same polynucleotide or polypeptide is separated from other substances existing in its natural state. It is isolated and pure.
如本文所用, "分离的人核糖^ S7 蛋白 16" 是指人核糖体 S7 白 16 基 本上 ^含天然与其相关的其它蛋白、 ¾类、 ¾类或其它物质。 本领¾的技 人 员能用标准的蛋白质纯化技术纯化人核糖体 S7 蛋白 16。 基本上纯的多肽在非 还原聚丙烯酰胺凝胶上能产生单一的主带。 人核糖体 S7 蛋白 16 多肽的纯度能 用氨基酸序歹 分析。 As used herein, "isolated human ribose ^ S7 protein 16" means that human ribosomal S7 white 16 basically contains other proteins, class ¾, class ¾, or other substances naturally associated with it. Skilled person Humans can purify human ribosomal S7 protein 16 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the human ribosomal S7 protein 16 polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽一一人核糖体 S7蛋白 16, 其基本上是由 SEQ ID N0:2所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多肽、 合成 多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学合成的产 物, 或使用重组技术从原核或真核宿主(例如, 细菌、 酵母、 高等植物、 昆虫和哺 乳动物细胞)中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以是糖基化 的, 或可以是非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫氨酸残基。  The present invention provides a new polypeptide-human ribosomal S7 protein 16, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide. The polypeptides of the invention may be naturally purified products, or chemically synthesized products, or produced using recombinant techniques from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells). Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
本发明还包括人核糖体 S7 蛋白 16 的片段、 衍生物和类似物。 如本发明所 用, 术语 段" 、 "衍生物" 和 "类似物" 是指基本上保持本发明的人核糖 体 S7 蛋白 16 相同的生物学功能或活性的多肤。 本发明多肽的片段、 衍生物或 类似物可以是: ( I ) 这样一种, 其中一个或多个氨基酸残基被保守或非保守 氨基酸残基 (优选的是保守氨基酸残基) 取代, 并且取代的氨基酸可以是也可 以不是由遗传密码子编码的; 或者 ( II ) 这样一种, 其中一个或多个氨基酸残 基上的某个基团被其它基团取代包含取代基; 或者 ( in ) 这祥一种, 其中成 熟多肽与另一种化合物 (比如延长多肽半衰期的化合物, 例如聚乙二醇) 融合; 或者 ( IV) 这样一种, 其中附加的氨基酸序列融合进成熟多肽而形成的多肽序 歹' J (如前导 列或分泌序列或用来纯化此多肽的序列或蛋白原序列) 通过本文 的阐述, 这 ^的片段、 衍生物和类似物被认为在本领域技术人员的知识范围之 内。  The invention also includes fragments, derivatives and analogs of the human ribosome S7 protein 16. As used herein, the terms "," "derivatives" and "analogs" refer to polypeptides that substantially retain the same biological function or activity of the human ribosome S7 protein 16 of the invention. Fragments, derivations of polypeptides of the invention The analog or analog may be: (I) a type in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substituted amino acid may or may not be Encoded by the genetic codon; or (II) such a type in which a group on one or more amino acid residues is replaced by another group to include a substituent; or (in) this type, wherein the mature polypeptide Fusion with another compound (such as a compound that prolongs the half-life of a polypeptide, such as polyethylene glycol); or (IV) a polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide, J 'J (as in the leading column Or secreted sequences or sequences used to purify this polypeptide or protease sequences) As explained herein, these fragments, derivatives and similar It is considered within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸) . 基本由编码具有 SEQ ID NO: 2 氨 基酸序列的多 的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID NO: 1 的 核苷酸序 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包 含的多核苷酸序列全长为 2533个碱基, 其开放读框 801-1229 编码了 142 个氨 基酸。 根据基因芯片表达谱比较发现, 此多肽与人核糖体 S7 蛋白 9 有相似的 表达谱, 可推 出该人核糖体 S7蛋白 16具有人核糖体 S7蛋白 9相似的功能。  The present invention provides an isolated nucleic acid (polynucleotide). It consists essentially of a polynucleotide encoding a polynucleotide having the amino acid sequence of SEQ ID NO: 2. The polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1 The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a full-length polynucleotide sequence of 2533 bases, and its open reading frame 801-1229 encodes 142 amino acids. According to the comparison of gene chip expression profiles, it was found that this polypeptide has a similar expression profile with human ribosomal S7 protein 9, and it can be deduced that the human ribosomal S7 protein 16 has similar functions to human ribosomal S7 protein 9.
本发明的多核苷酸可以是 DNA 形式或是 RNA 形式。 DNA 形式包括 cDNA、 基 因组 DN A或人工合成的 DN A。 DNA可以是单链的或是双链的。 DNA可以是编码链 或非编码链 ¾码成熟多肽的编码区序列可以与 SEQ ID NO: 1 所示的编码区序 列相同或者是 ^并的变异体。 如本发明所用. "简并的变异体" 在本发明中是 指编 具 SEQ ID NO: 2 的蛋白质或多肽, ':'兰与 SEQ ID NO: 1 所示的编码区序 列有差别的核酸序列。 The polynucleotide of the present invention may be in the form of DNA or RNA. DNA forms include cDNA, genomic DNA, or synthetic DNA. DNA can be single-stranded or double-stranded. The DNA may be a coding or non-coding strand. The coding region sequence of a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or it may be a variant. As used in the present invention. "Degenerate variant" in the present invention refers to a protein or polypeptide prepared by SEQ ID NO: 2, ":" blue and the coding sequence shown in SEQ ID NO: 1 Differentiated nucleic acid sequences are listed.
编码 SEQ ID NO: 2 的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多 ¾的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附 加编码字列) 以及非编码序列。  The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the mature coding sequence and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences) And non-coding sequences.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加 编码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
本^明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基 酸序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天 然发生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异 体、 缺失变异体和插入变异体。 如本领域所知的, 等位变异体是一 多核苷酸 的替换形式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质 上改变其编码的多肽的功能。  The present invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the present invention. Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide, which may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially alter the polypeptides it encodes. Features.
本发明还涉及与以上所描述的序列杂交的多核苷羧 (两个序列之间具有至 少 50 . 优选具有 70%的相同性) 。 本发明特别涉及在严格条件下与本发明所 述多核苷酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: (1)在较低 离子强 ¾和较高温度下的杂交和洗脱, 如 0.2xSSC, 0.1%SDS, 60°C;或(2)杂交 时加用变性剂, 如 50%(v/v)甲酰胺, 0.1%小牛血清 /0. l%Ficoll, 42'C等; 或(3) 仅在两条序列之间的相同性至少在 95%以上,更好是 97。/。以上时才发生杂交。 并 且, 可杂交的多核苷酸编码的多肽与 SEQ ID NO: 2 所示的成熟多肽有相同的 生物学 能和活性。  The present invention also relates to a polynucleoside carboxylate that hybridizes to the sequence described above (having at least 50. preferably 70% identity between the two sequences). The present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions. In the present invention, "strict conditions" means: (1) hybridization and elution at lower ion strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) during hybridization Add denaturants, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% Ficoll, 42'C, etc .; or (3) the identity between the two sequences is at least 95 % Or more, more preferably 97. /. Only when the above hybridization occurs. In addition, the polypeptide encoded by the hybridizable polynucleotide has the same biological energy and activity as the mature polypeptide shown in SEQ ID NO: 2.
本^明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核 酸片段 ' 长度至少含 10 核苷酸, 较好是至少 20-30 个核苷酸, 更好是至少 50-60 A核苷酸, 最好是至少 100 A核苷酸以上。 核酸片段也可用亍核酸的扩 增技术(如 PCR)以确定和 /或分离编码人核糖体 S7蛋白 16的多核苷酸。  The present invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used in the present invention, a "nucleic acid fragment 'contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 A nucleotides, most preferably at least 100 A nucleotides Above, nucleic acid fragments can also be amplified by nucleic acid amplification technology (such as PCR) to determine and / or isolate the polynucleotide encoding human ribosomal S7 protein 16.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。 本 ^明的编码人核糖体 S7 蛋白 16 的特异的多核苷酸序列能用多种方法获 得。 例 "5口. 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但不局限于: 1)用探针与基因组或 cDNA 文库杂交以检出同源的多核苷酸序列, 和 2)表达文 库的抗体筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity. The specific polynucleotide sequence encoding human ribosomal S7 protein 16 can be obtained by various methods. Example "5. Isolate polynucleotides using hybridization techniques well known in the art. These techniques include but are not limited to: 1) hybridizing a probe to a genomic or cDNA library to detect homologous polynucleotide sequences, and 2) The antibodies of the expression library are screened to detect cloned polynucleotide fragments having common structural characteristics.
本 明的 DNA 片段序列也能用 列方法获得: 1 )从基因组 DNA分离双链 DNA 序列; 2 )化学合成 D N A序列以茯得所述多肽的双链 D N A : The DNA fragment sequence of the present invention can also be obtained by the following methods: 1) separating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide :
上^提到的方法中, 离基因组 DNA 最不常用: DNA 序列的直接化学合成 是经常选用的方法。 更经常选用的方法是 cDNA序列的分离。 分离感兴趣的 cDNA 的标准方法是从高表达该基 3的供体细胞分离 mRM并进行逆转录, 形成质粒或 噬菌体 cDNA 文库。 提取 mRNA 的方法已有多种成熟的技术, 试剂盒也可从商业 途径获得(Qiagene)。 而构建 cDNA 文库也是通常的方法(Sambrook, et al. , Molecular Cloning, A Labora tory Manua 1, Cold Spring Harbor Laboratory. New York, 1989)。 还可得到商业供应的 cDNA 文库, 如 Clontech 公司的不同 cDNA 文库。 当结合使用聚合酶反 ϋ技术时, 即使极少的表达产物也能克隆。 Of the methods mentioned above, genomic DNA is the least commonly used: direct chemical synthesis of DNA sequences Is the method of choice. The more commonly used method is the isolation of cDNA sequences. The standard method for isolating cDNA of interest is to isolate mRM from donor cells that overexpress this group 3 and perform reverse transcription to form a plasmid or phage cDNA library. There are many mature techniques for extracting mRNA, and kits are also commercially available (Qiagene). The construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Labora tory Manua 1, Cold Spring Harbor Laboratory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDNA 文库中筛选本发明的基因。 这些方法包括(但不 限于): (l)DNA - DNA或 DNA-RNA杂交; (2)标志基因功能的出现或丧失; (3)测定 人核糖体 S7 蛋白 16 的转录本的水 ; (4)通过免疫学技术或测定生物学活性, 来检测基因表达的蛋白产物-. 上述方法可单用, 也可多种方法联合应用。  The genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of a marker gene function; (3) determination of the transcript of human ribosomal S7 protein 16; (4) ) Detecting protein products of gene expression by immunological techniques or measuring biological activity-The above methods can be used alone or in combination.
在第(1)种方法中, 杂^听用的探针是与本发明的多核苷酸的任何一部分同 源, 其长度至少 10个核苷褻. 较好是至少 30个核苷酸, 更好是至少 50个核苷 酸, 最好是至少 100个核苷致。 此外, 探针的长度通常在 2000个核苷酸之内, 较佳的为 1000 个核苷酸之^。 此处所用的探针通常是在本发明的基因序列信息 的基础上化学合成的 DNA序列。 本^明的基因本身或者片段当然可以用作探针。 DNA探针的标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。  In the method (1), the probe for heterozygous hearing is homologous to any part of the polynucleotide of the present invention, and has a length of at least 10 nucleosides, preferably at least 30 nucleotides, more Fortunately, at least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2,000 nucleotides, preferably 1,000 nucleotides. The probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The gene itself or a fragment thereof can of course be used as a probe. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
在第(4)种方法中, 检:' ':人核糖体 S7蛋白 16基因表达的蛋白产物可用免疫 学技术如 Western 印迹法, ^射免 ¾沉淀法, 酶联免疫吸附法(ELISA)等。 In the (4) method, the detection of: '' : the protein product of human ribosomal S7 protein 16 gene expression can be used immunological techniques such as Western blotting, radioimmunoprecipitation, enzyme-linked immunosorbent assay (ELISA), etc. .
应 用 PCR 技 术 扩 ; # D A/RNA 的 方 法 (Saiki, et al. Science Application of PCR technology; # D A / RNA method (Saiki, et al. Science
1985; 230: 1350-1354)被优^用于^得本发明的基因。 特别是很难从文库中得到 全长的 cDNA 时, 可优选使 ^ RACE 法(RACE - cDNA 末端快速扩增法), 用于 PCR 的引物可根据本文所公开^:本发明的多核苷酸序列信息适当地选择, 并可用常 规方法合成。 可用常规方: '5^通过凝胶电泳分离和纯化扩增的 DNA/RNA片段。 1985; 230: 1350-1354) were used to obtain the genes of the present invention. Especially when it is difficult to obtain the full-length cDNA from the library, the RACE method (RACE-Rapid Amplification of cDNA Ends) can be preferably used, and the primers used for PCR can be disclosed according to the present disclosure ^: The polynucleotide sequence of the present invention The information is appropriately selected and synthesized using conventional methods. Isolation and purification of amplified DNA / RNA fragments can be performed by conventional methods: '5 ^ by gel electrophoresis.
如上所述得到的本发 约基因. 或者各种 DNA 片段等的多核苷酸序列可用 常规方法如双脱氧链终止: ¾ (Sanger et al. PNAS, 1977, 74: 5463-5467)测定。 这类多核苷酸序列测定也 商业: :则序试剂盒等。为了获得全长的 cDNA序列, 测 序需反复进行。 有时需要: 多 A克隆的 cDNA 序列, 才能拼接成全长的 cDNA 序列。 Polynucleotide sequences of the gene of the present invention obtained as described above, or various DNA fragments, etc. can be determined by conventional methods such as dideoxy chain termination: ¾ (Sanger et al. PNAS, 1977, 74: 5463-5467). Such assays also commercially polynucleotide sequences:: the Sequencing Kit and the like. In order to obtain the full-length cDNA sequence, sequencing must be repeated. Sometimes the cDNA sequence of multiple A clones is needed to splice into a full-length cDNA sequence.
本发明也涉及包含本 ^ 的多核苷酸的载体, 以及用本发明的载体或直接 用人核糖体 S7 蛋白 16 绢 序列经基因工程产生的宿主细胞, 以及经重组技术 产生本 ^明所述多肽钓方:'^ 本发明中, 编码人核糖体 S7 蛋白 lb 的多核苷酸序列可插入到载体中, 以 构成含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟知的细菌 质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病毒、 逆转 录病毒或其它载体。 在本发明中适用的载体包括但不限于: 在细菌中表达的基 于 T7 启动子的表达载体(Rosenberg, et al. Gene, 1987, 56: 125); 在哺乳动 物细胞中表达的 pMSXND表达载体(Lee and Nathans, J Bio Chem. 263: 3521, 1988) 和在昆虫细胞中表达的来源于杆状病毒的载体。 总之, 只要能在宿主体内复制 和稳定, 任何质粒和载体都可以用二构建重组表达载体。 表达载体的一 A重要 特征是通常含有复制起始点、 启动子、 标记基因和翻译调控元件。 The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using the human ribosomal S7 protein 16 silk sequence, and the recombinant technology to produce the polypeptide described in the present invention. Party: '^ In the present invention, a polynucleotide sequence encoding a human ribosomal S7 protein lb may be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Rosenberg, et al. Gene, 1987, 56: 125) expressed in bacteria; pMSXND expression vectors expressed in mammalian cells ( Lee and Nathans, J Bio Chem. 263: 3521, 1988) and baculovirus-derived vectors expressed in insect cells. In short, as long as it can be replicated and stabilized in the host, any plasmid and vector can be used to construct recombinant expression vectors. An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
本领域的技术人员熟知的方法能用于构建含编码人核糖体 S 7蛋白 16的 D N A 序列和合适的转录 /翻译调控元件的表达载体。 这些方法包括体外重组 DNA 技 术、 DNA合成技术、 ;本内重组技术等(Sanibroook, et al. Molecular Cloning, a Labor a tor y Manual, cold Spring Harbor Laboratory. New York, 1989)。 所 述的 DNA序列可有效连接到表达载体中的适当启动子上, 以指导 mRNA合成。 这 些启动子的代表性例子有: 大肠杆菌的 lac或 trp启动子; λ噬菌体的 PL启动 子;真核启动子包括 CMV立即早期启动子、 HSV胸苷激酶启动子、早期和晚期 SV40 启动子、 反转录病毒的 LTRs 和其它一些已知的可控制基因在原核细胞或真核细 胞或其病毒中表达的启动子。 表达载体还包括翻译起始用的核糖体结合位点和 转录终止子等。 在载体中插入增强子序列将会使其在高等真核细胞中的转录得 到增强。 增强子是 DN'A表达的顺式作用因子, 通常大约有 10到 300个 基对, 作用于启动子以增强基因的转录。 ^"恭的例子包括在复制起始点晚期一^的 100 到 270个碱基对的 SV40增强子、 在复制起始点晚期一侧的多瘤增强子 及腺病 毒增强子等。 Methods known to those skilled in the art can be used to construct expression vectors containing a DNA sequence encoding human ribosomal S 7 protein 16 and appropriate transcription / translation regulatory elements. These methods include in vitro recombinant DNA technology, DNA synthesis technology, and internal recombination technology (Sanibroook, et al. Molecular Cloning, a Labor Manual, Cold Spring Harbor Laboratory. New York, 1989). The DNA sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the lac or trp promoter of E. coli; the PL promoter of lambda phage; eukaryotic promoters include the CMV immediate early promoter, the HSV thymidine kinase promoter, and the early and late SV40 promoters , Retroviral LTRs and other known promoters that control the expression of genes in prokaryotic or eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DN'A expression, usually about 10 to 300 base pairs, and act on promoters to enhance gene transcription. Examples of Gong include the SV40 enhancer of 100 to 270 base pairs at the late stage of the origin of replication, the polyoma enhancer and the adenovirus enhancer at the late side of the origin of replication.
此外, 表达载体优选地包含一 A或多个选择性标记基因, 以提供用于选择 转化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗 性以及绿色荧光蛋白(GFP) , 或用二 肠杆菌的四环素或氨苄青霉素抗'「生等。  In addition, the expression vector preferably contains one A or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase for eukaryotic cell culture, neomycin resistance, and Green fluorescent protein (GFP), or tetracycline or ampicillin against Enterobacteriaceae.
本领域一般技求人员都清楚如何选择适当的载体 /转录调控元件 (如启动 子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码人核糖体 S7 蛋白 16 的多核苷酸或含有该多核苷亵的重组 载体可转化或转导 宿主细胞, 柃成含有该多核苷酸或重组载体的基 3工程 化宿主细胞。 术语 " 主细胞" 指原核细胞, 如细菌细胞; 或是低等真核细胞, 如酵母细胞: 或是高等真核细胞. ^哺乳动物细胞。 代表性例子有: ¾杆菌.  In the present invention, a polynucleotide encoding a human ribosome S7 protein 16 or a recombinant vector containing the polynucleoside can transform or transduce a host cell into a base-engineered host cell containing the polynucleotide or the recombinant vector. The term "primary cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell: or a higher eukaryotic cell. ^ Mammalian cells. Representative examples are: ¾ Bacillus.
】0 链霉菌属; 细菌细胞如鼠伤寒沙门氏菌; 真菌细胞如酵母; 植物细胞; 昆虫细 胞如杲蝇 S2或 Sf9; 动物细胞如 CH0、 COS或 Bowes黑素瘤细胞等。 ] 0 Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as fly flies S2 or Sf9; animal cells such as CH0, COS or Bowes melanoma cells.
¾本发明所述的 DNA 序列或含有所述 DNA 序列的重组载体转化宿主细胞可 用本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能 吸收 DNA 的感受态细胞可在指数生长期后收获, 用 Ca 2法处理, 所用的步骤 在本领域众所周知。 可供选择的是用 MgCl2。 如果需要, 转化也可用电穿孔的方 法进行。 当宿主是真核生物, 可选用如下的 DNA 转染方法: 磷酸钙共沉淀法, 或者常规机械方法如显微注射、 电穿孔、 脂质体包装等。 ¾ Transformation of a host cell by the DNA sequence of the present invention or a recombinant vector containing the DNA sequence can be performed by conventional techniques well known to those skilled in the art. When the host is a prokaryote, such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with the Ca 2 method. The steps used are well known in the art. Alternatively, MgCl 2 is used. If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
選过常规的重组 DNA 技术, 利用本发明的多核苷酸序列可用来表达或生产 重组¾人核糖体 S7蛋白 16 (Science, 1984; 224: 1431)。 一般来说有以下步骤: After selecting conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used to express or produce recombinant ¾ human ribosome S7 protein 16 (Science, 1984; 224: 1431). Generally there are the following steps:
(1) .用本发明的编码人 人核糖体 S7蛋白 16 的多核苷酸(或变异体), 或用 含有-: ΐ多核苷酸的重组表达载体转化或转导合适 宿主细胞; (1) using the polynucleotide (or variant) encoding human human ribosome S7 protein 16 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing a-:: polynucleotide;
(2) .在合适的培养基中培养宿主细胞;  (2) culturing host cells in a suitable medium;
(3) .从培养基或细胞中分离、 纯化蛋白质。  (3) Isolate and purify protein from culture medium or cells.
在步骤 ( 2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种 常规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当 的细胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将 细胞再培养一段时间。  In step (2), depending on the host cell used, the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步骤 ( 3 ) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌到 细胞 : 如杲需要, 可利用其物理的、 化学^ 其它特性通过各种分离方法分 离和纯化重组的蛋白。 这些方法是本领域技 ^人员所熟知的。 这些方法包括但 并不^于: 常规的复性处理、 蛋白沉淀剂处理(¾析方法)、 离心、 渗透破菌、 超声汶处理、 超离心、 分子筛层析(凝胶过滤)、 吸附层析、 离子交换层析、 高 效液^]层析(HPLC)和其它各种液相层析技术及这些方法的结合。 。 附图的简要说明  In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted into a cell: if necessary, its physical and chemical properties may be used to isolate and purify the recombinant by various separation methods Of protein. These methods are well known to those skilled in the art. These methods include but are not limited to: conventional renaturation treatment, protein precipitant treatment (¾ analysis method), centrifugation, osmotic bacteria treatment, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography , Ion exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods. . Brief description of the drawings
列附 Ε用于说明本发明的具体实施方案, 而不用于限定由权利要求书所 界定 本发 范围。  The list E is used to describe specific embodiments of the present invention, but not to limit the scope of the invention defined by the claims.
21是本^明人核糖体 S 7蛋白 16禾口人核糖体 S 7蛋白 9的基因芯片表达谱比较 图。 二图是人核糖体 S7蛋白 16的表达谱折方 S. 图是人核糖体 S7蛋白 9的表 达谱 方图。 其中, 1表示胎肾, 2表示胎大^ . 3表示骀小肠, 4表示胎肌, 5 表示 脑. 6¾示胎膀, 7表示未饥饿 L02, S表 L02+. 1 hr, As 9表示 ECV304 PMA- . 10表示 ECV304 PMA+, 11表示胎肝, 12表示正常肝, 13表示甲状腺, 14 表示皮 15表示胎肺, 16表示肺, 17表示肺癌, 18表示胎脾, 19表示脾脏, 20表示前列腺, 21表示胎心, 22表示心脏, 23表示肌肉, 24表示睾丸, 25表示 胎胸腺. 26表示胸腺。 21 is a comparison diagram of gene chip expression profiles of the present human ribosomal S 7 protein 16 and human ribosomal S 7 protein 9. The second figure is the expression profile of the human ribosome S7 protein 16. The figure is the expression profile of the human ribosome S7 protein 9. Among them, 1 indicates fetal kidney, 2 indicates fetal size ^. 3 indicates 骀 small intestine, 4 indicates fetal muscle, 5 indicates brain. 6¾ indicates fetal bladder, 7 indicates non-starved L02, S table L02 +. 1 hr, As 9 indicates ECV304 PMA-. 10 means ECV304 PMA +, 11 means fetal liver, 12 means normal liver, 13 means thyroid, 14 means skin 15, fetal lung, 16 means lung, 17 means lung cancer, 18 means fetal spleen, 19 means spleen, 20 means prostate , 21 is the fetal heart, 22 is the heart, 23 is the muscle, 24 is the testis, 25 is the fetal thymus, and 26 is the thymus.
S 2 为分离的人核精体 S7蛋白 16的聚丙烯酰胺凝胶电泳图 ( SDS- PAGE ) 。 S 2 is a polyacrylamide gel electrophoresis image (SDS-PAGE) of isolated human nuclear sperm S7 protein 16.
16kDa 为蛋白质的分子量 箭头所指为分离出的蛋白条带。 实现本发明的最佳方式 16kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说 明本发 而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方 法,通常按照常规条件如 Sambrook等人, 分子克隆:实验室手册(New York: Cold Spring Harbor Laboratory Press, 1989)中所述的条 , 或按照制造厂商所建 议的条 ^。  The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and are not used to limit the scope of the present invention. In the following examples, the experimental methods without specific conditions are generally performed according to conventional conditions such as those described in Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Cold Spring Harbor Laboratory Press, 1989), or according to the manufacturer Suggested Article ^.
实施 1: 人核糖体 S7蛋白 16的克隆  Implementation 1: Cloning of human ribosomal S7 protein 16
用异硫氰酸胍 /酚 /氯〈方一步法提取人胎脑总 RNA。 用 Quik mRNA Isolation Kit Human fetal brain total RNA was extracted by a one-step method with guanidine isothiocyanate / phenol / chlorine. Using Quik mRNA Isolation Kit
( Qiegene 公司产品) 从总 RM中分离 poly (A) mRNAc 2ug poly(A) mRNA经逆转录 形成 c DN A。用 Sma r t c DM克隆试剂盒(购自 Π on t e ch )将 c DNA片段定向插入到 pBSK (+) 载体(Clontech公司产品)约多克隆位点上, 转化 DH5 a, 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequencing ki t (Perkin-Elmer公司产品) 和 ABI 377自 动测字 ·' Pe r k i n-E 1 me r t司)测定所有克隆的 5 '和 3 '末端的序列。 将测定的 c DNA序 列与已 f的公共 DNA字歹'、'数据库 ( Genebank ) 进行比较. 结果发现其中一个克隆 0138 a 0 ό c DN A字歹':为新 通过合成一系列 1物对该克隆所含的插入 c DN A片段 进行^向测定。 结果表 . 0138a06克隆所含的全长 cDNA为 2533bp (如 Seq ID NO: 1 所示) . 从第 801bp至 1229bp有一个 428bp的开放阅读框突 ( 0RF ) . 编码一个新的 蛋白贡 (如 Seq ID NO: 2所示) 。 我们将此克隆命名为 pBS-0138a06 , 编码的蛋白质 命名 . 亥糖体 S7蛋白 16; 实施 ί列 2: 用 RT-PCR方法 隆编码人核糖体 S7蛋白 16的基 (Qiegene company product) Poly (A) mRNA c 2ug poly (A) mRNA was isolated from total RM by reverse transcription to form c DN A. Using the Sma rtc DM cloning kit (purchased from Π on te ch), the c DNA fragment was inserted into a pBSK (+) vector (product of Clontech) at about multiple cloning sites to transform DH5a, and the bacteria formed a cDNA library. The sequences at the 5 'and 3' ends of all clones were determined using Dye terminate cycle react ion sequencing kit (Perkin-Elmer) and ABI 377 automatic word-detection. 'Pe rki nE 1 mert Division). The determined c DNA sequence was compared with the public DNA word 'f' and 'Database' (Genebank). As a result, one of the clones 0138 a 0 ό c DN A word 'was found: a new sequence of 1 The cloned c DN A fragment was cloned for orientation determination. The results table. The 0138a06 clone contains a full-length cDNA of 2533bp (as shown in Seq ID NO: 1). There is a 428bp open reading frame (0RF) from 801bp to 1229bp. It encodes a new protein (such as Seq ID NO: 2). We named this clone pBS-0138a06, and named the encoded protein. Heliosome S7 protein 16 ; Implemented column 2: RT-PCR method was used to expand the base encoding human ribosomal S7 protein 16
闬 脑细胞总 RNA为模板, 以 oligo - dT为引物进行逆转录反应合成 cDNA,用 Qiagene 试剂盒纯化后, 下 引物进行 PCR扩增:  闬 The total RNA of brain cells was used as a template, and oligo-dT was used as a primer to perform reverse transcription reaction to synthesize cDNA. After purification with Qiagene kit, the primers were used for PCR amplification:
Primerl: 5'- GACAACAGAAATTTCAGTTATTAT -3" (SEQ ID N0: 3)  Primerl: 5'- GACAACAGAAATTTCAGTTATTAT -3 "(SEQ ID N0: 3)
Primer2: f- TATGTATAAGGTAAAGTATATTTA _3· (SEQ ID NO: 4) Primerl为位于 SEQ ID NO: 1的 5'端的第 lbp开始的正向序列; Primer2: f- TATGTATAAGGTAAAGTATATTTA _3 · (SEQ ID NO: 4) Primerl is a forward sequence starting from the 1st lbp at the 5 ′ end of SEQ ID NO: 1;
Primer2为 SEQ ID NO: 1的中的 3'端反向序列。  Primer2 is the 3 'end reverse sequence in SEQ ID NO: 1.
扩增反应的条件: 在 50 μ 1的反应体积中含有 50mmol/L t(Cl, 10隱 ol/L Tris- CI, (pH8.5) , 1.5mmol/L MgCI2, 200 μ mol/L dNTP, lOpmol引物, 1U的 Taq DNA聚合酶 (Clomech公司产品)。 在 PE9600型 DNA热循环仪(Perkin-Eimer公司)上按下列条件 反应 25个周期: 94。C 30sec; 55°C 30sec; 72°C 2min。 在 RT- PCR时同时设 β - act in 为阳性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA克 隆试剂盒连接到 PCR载体上 ( InvUrogen公司产品) 。 DNA序列分析结果表明 PCR产 物的 DNA序列与 SEQ ID NO: 1所示的 1- 2533bp完全相同。 实施例 3: Northern 印迹法分析人核糖体 S7蛋白 16基因的表达: Conditions for the amplification reaction: 50 mmol / L t (Cl, 10 cryptool / L Tris-CI, (pH 8.5), 1.5 mmol / L MgCI 2 , 200 μ mol / L dNTP in a reaction volume of 50 μ 1 , lOpmol primer, 1U of Taq DNA polymerase (product of Clomech). The reaction was performed on a PE9600 DNA thermal cycler (Perkin-Eimer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min. Set β-act in as a positive control and template blank as a negative control at the same time during RT-PCR. The amplification products were purified using a QIAGEN kit, and connected to a PCR vector using a TA cloning kit (InvUrogen). DNA sequence analysis results show that the DNA sequence of the PCR product is exactly the same as the 1-2533bp shown in SEQ ID NO: 1. Example 3: Northern blot analysis of human ribosomal S7 protein 16 gene expression:
用一步法提取总 RNA[Anal. Biochem 1987, 162, 156-159]。 该法包括酸性硫氰 酸胍苯酚 -氯仿抽提。 即用 4 异¾氰酸胍 - 25m 柠檬酸钠, 0.2M乙酸钠 ( pH4.0 ) 对 组织进行匀浆, 加入 1倍体积的苯酚和 1/5体积的氯仿-异戊醇 (49: 1 ) , 混合后离 心。 吸出水相层, 加入异丙醇 ( 0.8体积) 并将混合物离心得到 RNA沉淀。 将得到的 RNA沉淀用 70%乙醇洗涤, 干燥并溶于水中。 用 20 g RNA, 在含 20mM 3- ( N-吗啉代) 丙磺酸 ( pH7. Q ) - 5mM乙酸钠 -lmiM EDTA - 2.2M甲醛的 1.2%琼脂糖凝胶上进行电泳。 然后转移至硝酸纤维素膜上。 用 a- 32P dATP通过随机引物法制备 32P-标记的 DNA探 针。 所用的 DNA探针为图 1所示的 PCR扩增的人核糖体 S7蛋白 16编码区序列(801bp至 1229bp)。 将 32P-标记的探针 (约 2 χ 106cpm/ml ) 与转移了 RNA的硝酸纤维素膜在一 溶液中于 42(>C杂交过夜, 该溶¾包含 50¾甲酰胺 - 25m ΚΗ,ΡΟ, ( ρΗ7.4 ) -5 SSC-5 Denhardt's溶液和 200 yg/ml鲑精 DNA。 杂交之后, 将滤膜在 1 x SSC— 0.1¾SDS中于 洗 30min。 然后, 用 Phosphor Imager进行分析和定量。 实施例 4: 重组人核糖体 S7蛋白 16的体外表达、 分离和纯化 Total RNA was extracted in one step [Anal. Biochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction. That is, the tissue is homogenized with 4 guanidine cyanocyanate-25m sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1) are added. ) And centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. Using 20 g of RNA, electrophoresis was performed on a 1.2% agarose gel containing 20 mM 3- (N-morpholino) propanesulfonic acid (pH 7. Q)-5 mM sodium acetate-1 miM EDTA-2.2 M formaldehyde. It was then transferred to a nitrocellulose membrane. Preparation 32 P- DNA probe labeled with a- 32 P dATP by random priming method. The DNA probe used was the sequence of the human ribosome S7 protein 16 coding region (801bp to 1229bp) amplified by PCR shown in FIG. 1. A 32P-labeled probe (approximately 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 (> C overnight in a solution containing 50 ¾ formamide-25 m κ, ΡΟ (ρΗ7.4) -5 SSC-5 Denhardt's solution and 200 yg / ml salmon sperm DNA. After hybridization, the filter was washed in 1 x SSC-0.1¾SDS for 30 min. Then, it was analyzed and quantified by Phosphor Imager. Example 4: In vitro expression, isolation and purification of recombinant human ribosomal S7 protein 16
根据 SEQ ID NO: 1和图 1所示的编码区序列, 设计出一对特异性扩增引物, 序 列如下:  Based on SEQ ID NO: 1 and the coding region sequence shown in Figure 1, a pair of specific amplification primers were designed, the sequence is as follows:
Primer3: 5*- CATGCTAGCATGACTAGAACTAAAACAGTAAAT -3' ( Seq ID No: 5 ) Primer4: 5'- CATGGATCCCTATTGTAACGTTGTTAGTAGTTC -3" ( Seq ID No: 6 ) 此两段引物的 5'端分别含有 Nhel和 BamHI酶切位点, 其后分别为目的基因 5'端 Primer3: 5 *-CATGCTAGCATGACTAGAACTAAAACAGTAAAT -3 '(Seq ID No: 5) Primer4: 5'- CATGGATCCCTATTGTAACGTTGTTAGTAGTTC -3 "(Seq ID No: 6) The 5' ends of these two primers contain Nhel and BamHI restriction sites, respectively. 5 'end of target gene
¾ 3 '端的编码序列, N'he I和 BamH I酶切位点相应于表达载体质粒 pET- 28 b (+) (No va gen ^司产品, Cat. No. ()9865.3)上的选择性内切酶位点 乂含有全长目 基因的 pBS- 0138a06质粒为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50 μ 1中含 pBS-0138a06 质粒 10pg、 引物 P mer- 3和 Pr inier - 4分另1 J为 1 Opmoi、 Advantage polymerase Mix ( Clomech公司产品) 1 μ 1。 循环参数: 94。C 20s, 60°C 30s, 68°C 2 niin,共 25个 循环。 用 Nhe I和 BamH I分别对扩增产物和质粒 pET- 28 (+)进行双酶切,分别回收大片 段,并用 T4连接酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5 CC,在含卡那霉素 (终浓度 30 g/ml ) 的 LB平板培养过夜后, 用菌落 PCR方法筛选阳性克隆, 并进行 测序。 挑选序列正确的阳性克隆 ( pET- 0138a06 ) 用氯化钙法将重组质粒转化大肠 杆菌 BL21 (DE3)plySs (Novagen公司产品)。 在含卡那霉素 (终浓度 30 μ g/ml ) 的 LB 液体培养基中, 宿主菌 BL21 ( PET-0138a06 ) 在 37°C培养至对数生长期, 加入 IPTG 至终浓度 lmmol/L, 继续培养 5小时。 离心收集菌体, 经超声波破菌,离心收集上清, 用能与 6个组氨酸( 6His- Tag )结合的亲和层析柱 His. Bind Quick Cartridge! Novagen 公司产品)进行层析, 得到了纯化的 g的蛋白人核糖体 S7蛋白 16。 经 SDS - PAGE电泳, 在 16kDa处得到一单一的条带 (图 2 ) , 将该条带转移至 PVDF膜上用 Edams水解法进 行 N-端氨基酸序列分析, 结果 N-端 15 氨基酸与 SEQ ID NO: 2所示的 N-端 15个氨基 酸残基完全相同。 实施例 5 抗人核糖体 S7蛋白 16抗体的产生 ¾ 3 'coding sequence, N'he I and BamH I restriction sites corresponding to the selectivity on the expression vector plasmid pET-28 b (+) (No va gen product, Cat. No. () 9865.3) Endonuclease site 乂 pBS- The 0138a06 plasmid was used as a template for the PCR reaction. The PCR reaction conditions were: a total volume of 50 μl containing 10 pg of pBS-0138a06 plasmid, primers P mer-3 and Pr inier-4 points, and 1 J was 1 Opmoi, Advantage polymerase Mix (Clomech) 1 μ1. Cycle parameters: 94. C 20s, 60 ° C 30s, 68 ° C 2 niin, a total of 25 cycles. Nhe I and BamH I were used to double digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase. The ligation product was transformed into coliform bacteria DH5 CC using the calcium chloride method. After being cultured overnight on LB plates containing kanamycin (final concentration 30 g / ml), positive clones were selected by colony PCR method and sequenced. A positive clone (pET-0138a06) with the correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method. In containing kanamycin (final concentration of 30 μ g / ml) of LB liquid medium, host strain BL21 (P ET-0138a06) incubated at 37 ° C to logarithmic phase, IPTG was added to a final concentration of lmmol / L , Continue to cultivate for 5 hours. The bacteria were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. Chromatography was performed using an affinity chromatography column His. Bind Quick Cartridge! Novagen company product capable of binding to 6 histidines (6His-Tag). A purified g protein of human ribosomal S7 protein 16 was obtained. After SDS-PAGE electrophoresis, a single band was obtained at 16 kDa (Fig. 2). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by Edams hydrolysis method. The N-terminal 15 amino acid residues shown in NO: 2 are identical. Example 5 Production of anti-human ribosomal S7 protein 16 antibodies
用多肽合成仪 (PE公司产品) 合戍下迚人核榷体 S7蛋白 16特异性的多肽: NH2-Me t-Thr-Arg-Thr-Ly s-Thr-Va 1-Asn-Leu-As p-Asn-11 e-Lys-Pro-G 1 n- C00H(SEQ ID NO: 7)。 将该多肽分别与血蓝蛋白和牛血清白蛋白耦合形成复合, 方法参见: Avrameas, et al. Immunochem i s t ry, 1969; 6: 43。 用 4mg上述血蓝蛋 白多肽复合物加上完全弗氏佐剂免 ¾家兔. 15天后再用血蓝蛋白多肽复合物加 不完全弗氏佐剂加强免疫一次。 釆用经 15 μ g/ml牛血清白蛋白多肽复合物包被 的滴定板做 E L I S A测定兔血清中抗体的滴度。 用蛋白 A- S e p ha r 0 s e从抗体阳性的 家免血清中分离总 IgG。 将多肽结合 ÷溴化氰活化的 Sepharose4B柱上, 用亲和 层析法从总〗 gG中分离抗多肽抗体。 免疫沉淀法证明纯化的抗体可特异性地与 人核糖体 S7蛋白 16结合。 实施例 6: 本发明的多核苷酸片段用作杂交探针的应用  A peptide synthesizer (product of PE company) was used to combine the peptides specific for the human nucleus S7 protein 16: NH2-Me t-Thr-Arg-Thr-Ly s-Thr-Va 1-Asn-Leu-As p -Asn-11 e-Lys-Pro-G 1 n- C00H (SEQ ID NO: 7). The polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively. For the method, see: Avrameas, et al. Immunochem istry, 1969; 6: 43. Immunize rabbits with 4mg of the above hemocyanin peptide complex plus complete Freund's adjuvant. After 15 days, use the hemocyanin peptide complex plus incomplete Freund's adjuvant to boost immunity once. E Use a 15 μg / ml bovine serum albumin peptide complex-coated titer plate to make E L I S A to determine the antibody titer in rabbit serum. Total protein IgG was isolated from antibody-positive home-immunized serum using protein A-Sephar 0se. The peptide was bound to a Sepharose 4B column activated by cyanogen bromide, and the anti-peptide antibody was separated from the total gG by affinity chromatography. Immunoprecipitation demonstrated that the purified antibody specifically binds to human ribosomal S7 protein 16. Example 6: Application of the polynucleotide fragment of the present invention as a hybridization probe
从本发明的多核苷酸中挑选出合适的寡核苷酸片段用作杂交探针有多方面的 用途, 如用该探针可与不同来源的王堂组织或病理组织的基因组或 cDNA文库杂交 以鉴定其是否含有本发明的多核苷载 s列和检出同源的多核苷酸序列,进一歩还可 用该探针检 ¾本发明的多核苷酸序列或其同源的多核苷酸序列在正常组织或病理 组织细胞中的表达是否异常。 The suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways. For example, the probes can be used to hybridize to genomic or cDNA libraries from different tissues of royal or pathological tissues. and s columns identified polynucleotide sequences homologous to the polynucleotide carrier detected if it contains the present invention, further into a ho This probe is used to detect whether the polynucleotide sequence of the present invention or its homologous polynucleotide sequence is abnormally expressed in cells of normal tissue or pathological tissue.
本实施例的目的是从本发明的多核苷酸 SEQ ID NO: 1 中挑选出合适的寡核苷 酸片段用作杂交探针, 并用滤膜杂交方法鉴定一些组织中是否含有本发明的多核 苷酸序列或其同源的多核苷酸序列。 滤膜杂交方法包括斑点印迹法、 Southern 印 迹法、 Northern 印迹法和复印方法等, 它们都是将待测的多核苷酸样品固定在滤 膜上后使用基本相同的步骤杂交。 这些相同的步骤是: 固定了样品的滤膜首先用 不含探针的杂交缓冲液进行预杂交, 以使滤膜上样品的非特异性的结合部位被载 体和合成的多聚物所饱和。 然后预杂交液被含有标记探针的杂交缓冲液替换, 并 保温使探针与靶核酸杂交。 杂交步骤之后, 未杂交上的探针被一系列洗膜步骤除 掉。 本实施例利用较高强度的洗膜条件 (如较低盐浓度和较高的温度), 以使杂交 背景降低且只保留特异性强的信号。 本实施例选用的探针包括两类: 第一类探针 是完全与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段; 第二类探 针是部分与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段。 本实施 例选用斑点印迹法将样品固定在滤膜上, 在较高强度的的洗膜条件下, 第一类探 针与样品的杂交特异性最强而得以保留。  The purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method. Acid sequence or a homologous polynucleotide sequence thereof. Filter hybridization methods include dot blotting, Southern imprinting, Northern blotting, and copying methods. They all use the same steps to immobilize the polynucleotide sample to be tested on the filter. These same steps are as follows: The sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer. The pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid. After the hybridization step, the unhybridized probes are removed by a series of membrane washing steps. This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals. The probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention The polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment. In this example, the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
一、 探针的选用 First, the selection of the probe
从本发明的多核苷酸 SEQ ID NO: 1 中选择寡核苷酸片段用作杂交探针, 应遵 循以下原则 需要考虑的 个方面:  The selection of oligonucleotide fragments from the polynucleotide SEQ ID NO: 1 of the present invention as hybridization probes should follow the following principles to consider:
1, 探针大 ':、优选 围为 18-50个核苷酸; 1. The probe is large :: preferably 18-50 nucleotides;
2, GC合量为 3( - 70%, 超过则非特异性杂交增加: 2, GC combined amount is 3 (-70%, non-specific hybridization increases:
3, 探针内¾应无互补区域; 3, there should be no complementary regions in the probe;
4, 符合以上条件的可作为初选探针, 然后进一步作计算机序列分折, 包括将该 初选探 ^别^其来源序列区域 (即 SEQ ID NO: 1 ) 和其它已知的基因组序列 及其互^、区进行同源性比较, 若与非靶分子区域的同源性大于 85%或者有超过 15个连续碱基完全相同, 则该初选探针一般就不应该使用;  4. Those that meet the above conditions can be used as preliminary selection probes, and then further computer sequence analysis, including the preliminary selection ^ its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and Compare the homology of the regions with each other. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used generally
5, 初选探针是否最终选定为有实际应用价值的探针还应进一步由实验确定。 5. Whether the preliminary selection probe is finally selected as a probe with practical application value should be further determined by experiments.
完成以上各方面的分析后挑选并合成以下二 A探针:  After completing the above analysis, select and synthesize the following two A probes:
探针 1 ( probel ), 属于第一类探针, 与 SEQ ID NO: 1 的基因片段完全 同源或互补 ( 41 t ):  Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41 t):
2 ( probe2 ), 属于^二类探针, ¾当于 SEQ ID NO: 1 的基因片段 或其互补 段的替换突变序列 (41Nt ): 2 (probe2), which belongs to the second class of probes, and belongs to the gene fragment of SEQ ID NO: 1 Or its complementary mutant substitution sequence (41Nt):
5'- TGACTAGAACTAAAACAGTACATTTGGACAATATTAAGCCT -3' ( SEQ ID NO: 9 ) 与以下具体实验步骤有关的其它未列出的常用试剂及其配制方法请参考文 献: DNA PROBES G. H. el ler; M. M. Manak; Stockton Press, 1989 (USA)以及更常用 的分子克隆实验手册书籍如 《分子克隆实验指南》 ( 1998 年第二版) [美]萨姆布 鲁克等著, 科学出版社。  5'- TGACTAGAACTAAAACAGTACATTTGGACAATATTAAGCCT -3 '(SEQ ID NO: 9) For other commonly used reagents and their preparation methods not related to the following specific experimental procedures, please refer to the literature: DNA PROBES GH el ler; MM Manak; Stockton Press, 1989 ( USA) and more commonly used manuals of molecular cloning experiments such as "Molecular Cloning Experiment Guide" (Second Edition 1998) [US] Sambrook et al., Science Press.
样品制备:  Sample Preparation:
1, 从新鲜或冰冻组织中提取 DNA 1. Extract DNA from fresh or frozen tissue
步骤: 1 ) 将新鲜或新鲜解冻的正常肝组织放入浸在冰上并盛有磷酸盐缓冲液 (PBS) 的平皿中。 用剪刀或手术刀将组织切成小块。 搡作中应保持组织湿润。 2 ) 以 lOOOg 离心切碎组织 10分钟。 3) 用冷匀浆缓冲液 ( 0.25mol/L蔗糖; 25麵 ol/L Tris-HCl, pH7.5; 25画 ol/LnaCl: 25隱 ol/L MgCl2 ) 悬浮沉淀 (大约 10nil/g )0 4 ) 在 4UC 用电动匀浆器以全速匀浆组织悬液, 直至组织被宪全破碎。 5 ) lOOOg 离心 10分钟。 6 ) 用重悬细胞沉淀 (每 0. lg最初组织样品加 l-5ml ), 再以 lOOOg离心 10分钟。 7 ) 用裂解缓冲液重悬沉淀 (每 0. lg最初组织^品加 lml ), 然后接以下 的苯酚抽提法。 Steps: 1) Place fresh or freshly thawed normal liver tissue in a plate immersed in ice and filled with phosphate buffered saline (PBS). Cut the tissue into small pieces with scissors or a scalpel. Tissue should be kept moist during operation. 2) Centrifuge the tissue at 1,000 g for 10 minutes. 3) Use cold homogenization buffer (0.25mol / L sucrose; 25 sides ol / L Tris-HCl, pH7.5; 25 points ol / LnaCl: 25 hidden ol / L MgCl 2 ) Suspend the precipitate (about 10nil / g) 0 4) Homogenize the tissue suspension at 4 U C at full speed with an electric homogenizer until the tissue is completely broken. 5) Centrifuge at 1000g for 10 minutes. 6) Resuspend the cell pellet (l-5 ml per 0.1 g of the initial tissue sample), and centrifuge at 1,000 g for 10 minutes. 7) Resuspend the pellet with lysis buffer (add 1 ml per 0.1 g of the original tissue), and then follow the phenol extraction method below.
2, DNA的苯酚抽提法  2, DNA phenol extraction method
步骤: 1 ) 用 1- 10ml 冷 PBS洗细胞, 1000g离心 10分钟。 2 ) 用冷细胞裂解液 重悬浮沉淀的细胞 ( 1 X 108细胞 /ml ) 最少应用 lOOul ¾解缓冲液。 3) 加 SDS 至 终浓度为 1/。, 如果在重悬细胞之前将 SDS 直接加入到^ ¾沉淀中, 细胞可能会形 成大的团块而难以破碎. 并降低的总产率。 这一点在抽 ¾>107细胞时特别严重。 4 ) 加蛋白酶 K至终浓度 200ug/ml。 5 ) 50°C保温反应 1小 E 或在 37°C轻轻拫摇过夜。 6) 用等体积苯酚: 氯仿: 异戊醇 ( 25: 24: 1 ) 抽提, ΐ小离心机管中离心 10分 钟。 两相应清楚分离, 否则重新进行离心 7 ) 将水相 移至新管。 8) 用等体积 氯仿: 异戊醇 (24: 1 ) 抽提, 离心 10分钟。 9) 将含 DN'A的水相转移至新管。 然 后进行 DNA的纯化和乙醇沉淀。 Steps: 1) Wash cells with 1-10 ml of cold PBS and centrifuge at 1000g for 10 minutes. 2) with cold cell lysate pelleted cells were resuspended (1 X 10 8 cells / ml) Minimum application lOOul ¾ buffer solution. 3) Add SDS to a final concentration of 1 /. If SDS is added directly to the ^ ¾ pellet before resuspending the cells, the cells may form large clumps that are difficult to break. And reduce the overall yield. This is particularly serious when pumping ¾> 10 7 cells. 4) Add proteinase K to a final concentration of 200ug / ml. 5) Incubate the reaction at 50 ° C for 1 hour or shake gently at 37 ° C overnight. 6) Extract with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge in a small centrifuge tube for 10 minutes. The two should be clearly separated, otherwise centrifuge again. 7) Move the water phase to a new tube. 8) Extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 9) Transfer the aqueous phase containing DN'A to a new tube. The DNA was then purified and ethanol precipitated.
3, DNA的纯化和乙醇沉';定  3, DNA purification and ethanol precipitation;
步骤: 1 )将 1/10体积 2mo 1/L醋酸钠 ¾ 2 ί咅体积冷:00%乙醇加到 DNA溶液中, 混匀。 在 -20"C放置 1小时或至过夜。 2 ) 离心 10分钟。 3 ) 小心吸出或 ί到出乙醇。 4 )用 70¾冷乙醇 500ui 洗涤沉淀, 离心 5分钟。 5 小心 ¾出或 ί到出乙醇。 用 500ul 冷乙醇洗涤沉淀, 离心 5分钟。 6 ) 小心吸出或倒出乙醇. 然后在吸水纸上倒置使 残余乙醇流尽. 空气干 '桑 10-1 分钟, ^使表面乙醇 ¾。 :'王意不要使沉淀完全 干燥, 否则较难重新溶解。 7 ) 以小体积 TE 或水重悬 DN'A 沉淀。 低速涡旋振荡或 用滴管吹吸, 同时逐渐增加 TE, 混合至 DNA充分溶解, 每 1-5 X 106细胞所提取的 大约加 lul。 Steps: 1) Add 1/10 volume of 2mo 1 / L sodium acetate ¾ 2 volume cold: 00% ethanol to the DNA solution and mix well. Leave at -20 "C for 1 hour or overnight. 2) Centrifuge for 10 minutes. 3) Carefully aspirate or lift out the ethanol. 4) Wash the pellet with 70¾ cold ethanol 500ui, and centrifuge for 5 minutes. 5 Carefully lift or lift out Ethanol. Wash the pellet with 500ul of cold ethanol and centrifuge for 5 minutes. 6) Carefully aspirate or pour out the ethanol. Then invert on the absorbent paper to drain the residual ethanol. Air dry the mulberry for 10-1 minutes, and make the surface ethanol ¾ .: 'Wang Yi, don't make the precipitation completely Dry, otherwise it will be more difficult to re-dissolve. 7) Resuspend the DN'A pellet with a small volume of TE or water. Low-speed vortexing or pipetting, with a dropper, while gradually increasing the TE, mixed until fully dissolved DNA, every 1-5 X 10 6 cells extracted about plus lul.
以下第 8-13步骤仅用于必须除去污染时, 否则可直接进行第 14步骤。  The following steps 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
8 ) 将 RNA酶 A加到 DNA溶液中, 终浓度为 100ug/ml, 37°C保温 30分钟。 9 ) 加 入 SDS 和蛋白酶 K, 终浓度分别为 0.5%和 100ug/ml。 37。C保温 30分钟。 10 ) 用 等体积的苯酚: 氯仿: 异戊醇 ( 25: 24: 1 ) 抽提反应液, 离心 10 分钟。 11 ) 小 心移出水相, 用等体积的氯仿: 异戊醇 (24: 1 ) 重新抽提, 离心 10 分钟。 12 ) 小心移出水相, 加 1/10体积 2mol/L醋酸钠和 2.5体积冷乙醇, 混匀置 -20。C 1小 时。 13 ) 用 70%乙醇及 100%乙醇洗涤沉淀, 空气干燥, 重悬核酸, 过程同第 3 - 6 步骤。 14 ) 测定 Α26ϋ和 A28()以检测 DNA的纯度及产率。 15 ) 分装后存放于 -20°C。 样膜的制备: 8) Add RNase A to the DNA solution to a final concentration of 100 μg / ml, and incubate at 37 ° C for 30 minutes. 9) Add SDS and proteinase K to the final concentration of 0.5% and 100ug / ml. 37. C was held for 30 minutes. 10) Extract the reaction solution with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge for 10 minutes. 11) Carefully remove the aqueous phase and re-extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 12) Carefully remove the water phase, add 1/10 volume of 2mol / L sodium acetate and 2.5 volumes of cold ethanol, mix well and set to -20. C for 1 hour. 13) Wash the pellet with 70% ethanol and 100% ethanol, air dry, and resuspend the nucleic acid. The process is the same as steps 3-6. 14) A26ϋ and A28 () were measured to detect the purity and yield of DNA. 15) Store at -20 ° C after dispensing. Preparation of sample film:
1 ) 取 4 x 2 张适当大小的硝酸 维素膜 (NC 膜), 用铅笔在其上轻轻标出点样 位置及样号, 每一探针需两张 NC , 以便在后面的实验步骤中分别用高强度条件 和强度条件洗膜 。  1) Take 4 x 2 sheets of appropriate size nitric acid membrane (NC membrane), and mark the spotting position and sample number on it with a pencil. Two NCs are needed for each probe, so that it can be used in the following experimental steps. The film was washed with high-strength conditions and strength conditions, respectively.
2 ) 吸取及对照各 15微升, 点于祥膜上, 在室温中晾干。  2) Aspirate and control 15 microliters each, place on the film, and dry at room temperature.
3 ) 置于浸润有 0, Imol/LNaOH, 1.5mol/LNaCl 的滤纸上 5分钟 (两次), 晾干置 于浸润有 0.5mol/L Tris-HCl ( pH7.0 ), 3mol/LNaCl 的滤纸上 5分钟 (两次), 晾 干。  3) Place on filter paper impregnated with 0, Imol / LNaOH, 1.5mol / L NaCl for 5 minutes (twice), dry and place on filter paper impregnated with 0.5mol / L Tris-HCl (pH7.0), 3mol / L NaCl Allow to dry for 5 minutes (twice).
4 ) 夹于干净滤纸中, 以铝箔包好. 60-80。C真空干燥 2小时。  4) Clamp in clean filter paper and wrap with aluminum foil. 60-80. C was dried under vacuum for 2 hours.
探针的标记  Labeling of probes
1 ) 3 μ IProbe ( 0. lOD/10 μ 1 刀口入 2 μ IKinase缓冲液, 8-10 uCi v-? P-dATP+2U Kinase, 以补加至终体积 20 μ 1。 1) 3 μ IProbe (0.1 OD / 10 μ 1 knife edge into 2 μ IKinase buffer, 8-10 uCi v- ? P-dATP + 2U Kinase, to make up to a final volume of 20 μ 1.
2 ) 37 °C 保温 2小时。  2) Incubate at 37 ° C for 2 hours.
3 ) 加 1/5体积的溴酚蓝指示剂 ( BPB )。  3) Add 1/5 volume of bromophenol blue indicator (BPB).
4 ) 过 Sephadex G- 50柱。  4) Pass Sephadex G-50 column.
5 ) 至有 32P- Probe洗出前开始收集第一峰 (可用 Monitor监测)。 5) Before the 32 P-Probe is washed out, start collecting the first peak (can be monitored by Monitor).
6 ) 5滴 /管, 收集 10-15管。  6) 5 drops / tube, collect 10-15 tubes.
7 ) 用液体闪烁仪监测同位素量  7) Monitor the amount of isotope with a liquid scintillator
8 ) 会并第一峰的收集液后印 ^所需制备的 3:P- Probe (第二峰为游离 γ- - dATP )。 8) After the collection solution of the first peak is merged, 3: P-Probe (the second peak is free γ--dATP) is prepared.
预杂交 将样 置于塑料袋中,加八 3-1 Omg预杂交液( lOxDenhardf s; 6xSSC, 0. lmg/ml CT DNA (小牛胸腺 DNA)。), 封好袋口后, 68°C水浴摇 2小时。 Pre-hybridization Place the sample in a plastic bag, add eight 3-1 Omg pre-hybridization solution (lOxDenhardf s; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).), Seal the bag, and shake at 68 ° C in a water bath 2 hours.
杂交  Cross
将塑 袋剪去一角, 加入制备好的探针, 封好袋口后, 42°C水浴摇过夜。 洗膜:  Cut a corner of the plastic bag, add the prepared probe, seal the bag, and shake it at 42 ° C in a water bath overnight. Wash film:
高强度洗膜:  High-intensity washing film:
1 ) 取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1%SDS中, 40UC洗 15分钟 ( 2次)。 2) 2xSSC, 0.1% SDS, 40 U C for 15 minutes (twice).
3 ) 0. IxSSC, 0.1%SDS中 , 40°C洗 15分钟 ( 2次)。  3) 0. IxSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (twice).
4 ) 0. IxSSC, 0.1%SDS中, 55°C洗 30分钟 ( 2次), 室温晾干。 低强度洗镇:  4) 0. IxSSC, 0.1% SDS, wash at 55 ° C for 30 minutes (twice), and dry at room temperature. Low intensity washdown:
1 ) 出已杂交好的样膜:  1) Out of the hybridized membrane:
2 ) 2xSSC, 0.1½SDS中 , 37。C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1½ SDS, 37. C Wash for 15 minutes (twice).
3 ) 0. IxSSC, 0.1%SDS中, 37。C洗 15分钟 ( 2次)。  3) 0. IxSSC, 0.1% SDS, 37. C Wash for 15 minutes (twice).
4 ) 0. IxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 1次), 室温晾干  4) 0. IxSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (1 time), and dry at room temperature
X -光自显影: X-ray autoradiography:
-70°C, X-光自显影 (压片时间根据杂交斑放射性强弱而定)。  -70 ° C, X-ray autoradiography (pressing time depends on the radioactivity of the hybrid spot).
实验结杲:  Experimental results:
采用^强度洗膜条件所进行的杂交实验. 上两个探针杂交斑放射 强弱没 有明显区 ; 而采用高强度洗蔟条件所进行的杂交实验, 探针 1 的杂交斑放射性 强度明显2虽于另一个探针杂交斑的放射性强度。 因而可用探针 1 定性和定量地分 析本发明 多核苷酸在不同组织中的存在和差异表达。 Hybridization experiments using ^ intensity membrane washing conditions. The radiation intensity of the hybrid spots on the last two probes has no obvious area; while hybridization experiments using high intensity washing conditions, the radioactive intensity of hybrid spots on probe 1 is significantly 2 To the radioactive intensity of the hybridization spot of another probe. Therefore, probe 1 can be used to qualitatively and quantitatively analyze the presence and differential expression of the polynucleotide of the present invention in different tissues.
实施例 7 D A Microarray Example 7 D A Microarray
基因芯片或基因微矩阵 ( DNA Microarray ) 是目前许多国家实验室 ¾大制药 公司都在着手研制和开发的新技术, 它是指将大量的靶基因片段有序地、 高密度 地排列在 ¾璃、 珪等载体上, 然后用荧光检测和计算机软件进行数据的比较和分 析, 以达到快速、 高效、 高通量地分析生物信息的目的。 本发明的多核苷酸可作 为靶 DNA 二基因芯片技术用二高通量研究新基因功能: 寻找和筛选组织特异性 新基因特别是肿瘤等疾病相关新基因; 疾病的诊断, 如遗传性疾病。 其具体方法 步骤在文献中已有多种报道, 如可参阅文献 DeRisi, J. L. ,Lyer, V. &Brown, P.0. (1997)Science278, 680—686.及文献 Helle, R. A., Schema, M. , Chai, A., Shalom, D., (1997) PNAS 94: 2150-2155. Gene microarrays or DNA microarrays are new technologies currently being developed by many national laboratories and large pharmaceutical companies. They refer to the orderly and high-density arrangement of a large number of target gene fragments in a glass. And tritium, and then use fluorescence detection and computer software to compare and analyze the data, so as to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information. The polynucleotide of the present invention can be used as a target DNA two-gene chip technology to study the function of new genes with two high-throughputs: find and screen for tissue specificity New genes, especially those related to diseases such as tumors; Diagnosis of diseases, such as hereditary diseases. The specific method steps have been reported in the literature. For example, see the literature DeRisi, JL, Lyer, V. & Brown, P.0. (1997) Science 278, 680-686. And the literature Helle, RA, Schema, M. , Chai, A., Shalom, D., (1997) PNAS 94: 2150-2155.
(一) 点样  (A) spotting
各种不同的全长 cDNA共计 4000条多核苷酸序列作为靶 DNA,其中包括本发明 的多核苷酸。 将它们分别通过 PCR 进行扩增, 纯化所得扩增产物后将其浓度调到 500ng/ul左右, 用 Cartesian 7500点样仪(购自美国 Cartesian公司)点于坡璃介 质上, 点与点之间的距离为 280 μΠι。 将点样后的玻片进行水合、 干燥、 置于紫外 交联仪中交联, 洗脱后干燥使 DNA 固定在玻璃片上制备成芯片。 其具体方法步骤 在文献中已有多种报道, 本实施例的点样后处理步骤是: A total of 4,000 polynucleotide sequences of various full-length cDNAs are used as target DNA, including the polynucleotides of the present invention. They were respectively amplified by PCR. After purification, the concentration of the amplified product was adjusted to about 500 ng / ul, and spotted on a sloped glass medium using a Cartesian 7500 spotter (purchased from Cartesian, USA) between the points. The distance is 280 μ Π ι. The spotted slides were hydrated, dried, and cross-linked in a UV cross-linker. After elution, the slides were fixed to fix the DNA on the glass slides to prepare chips. The specific method steps have been variously reported in the literature. The post-spot processing steps of this embodiment are:
1. 潮湿环境中水合 4小时;  1. Hydration in a humid environment for 4 hours;
2. 0.2%SDS洗涤 1分钟;  2. 0.2% SDS was washed for 1 minute;
3. ddH.O洗涤两次, 每次 1分钟;  3. ddH.O wash twice, 1 minute each time;
4. NaBH4封闭 5分钟; 4. NaBH 4 is blocked for 5 minutes;
5. 95°C水中 2分钟;  5. 95 ° C water for 2 minutes;
6. 0.2%SDS洗涤 1分钟;  6. Wash with 0.2% SDS for 1 minute;
7. ddH20冲洗两次; 7. Rinse twice with ddH 2 0;
8. : 干, 25°C储存于暗处备用。  8.: Dry, store at 25 ° C in the dark for future use.
(二) 探针标记  (2) Probe marking
用一步法分别从人体混合组织与机体特定 织 (或经过刺激的细胞株) 中抽 提总 niRNA, 并用 Oligotex mRNA Midi Kit (购自 QiaGen公司)纯化 mRNA,通过反转 录分别 焚光试齐l Cy3dUTP (5-Amino-propargy 1-2' -deoxyur id ine 5 -triphate coupled to Cy3 fluorescent dye, 购自 Amersham Phamacia Biotech 公司)标记 人体混合组织的 niRNA, 用荧光试剂 CySdUTP (5-Amino-propargy 1-2- -deoxyur id ine 5'-tr iphate coupled to Cy5 fluorescent dye , 自 Amersham Phamacia Biotech 公司)标记 体特定组织 (或经过刺激的细胞株) niRNA, 经纯化后制备出探针。 具 体步骤参照及方法见:  Total niRNA was extracted from human tissues and specific tissues (or stimulated cell lines) in one step, and mRNA was purified using Oligotex mRNA Midi Kit (purchased from QiaGen). Cy3dUTP (5-Amino-propargy 1-2 '-deoxyur id ine 5 -triphate coupled to Cy3 fluorescent dye, purchased from Amersham Phamacia Biotech) was used to label the niRNA of human mixed tissue, and the fluorescent reagent CySdUTP (5-Amino-propargy 1- 2- -deoxyur id ine 5'-tr iphate coupled to Cy5 fluorescent dye, from Amersham Phamacia Biotech company) marker specific tissue (or stimulated cell line) niRNA, and probes were prepared after purification. For specific steps and methods, see:
Schena, M. , Shalon, D., Hel ler, R. (1996) Proc. N tl. Acad. Sci. USA. Vol.93: 10614- 10619. Schena, M. , Shalon, Dari. , Davis, R. W. (1995) Science.270. (20): 467-480. Schena, M., Shalon, D., Heller, R. (1996) Proc. N tl. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M., Shalon, Dari., Davis, RW (1995) Science. 270. (20): 467-480.
(三) 杂交 (Three) cross
^ ^来自 以上两种组织的探针与芯 一起在 L'niHyb™ Hybridization Solution (购自 TeleChem 公司)杂交液中进行杂交 16 小时, 室温用洗涤液 ( 1 χ SSC, 0.2%SDS ) 洗涤后用 ScanArray 3000扫描仪 (购自美国 General Scanning公 司) 进行扫描, 扫描的图象用 Imagene软件 (美国 Biodiscovery公司 ) 进行数据 分析处理, 算出每个点的 Cy3/Cy5 比值。 ^ ^ Probes from both tissues and cores are used in L'niHyb ™ Hybridization Solution (purchased from TeleChem) was used for hybridization for 16 hours, and washed with a washing solution (1 x SSC, 0.2% SDS) at room temperature, and then scanned with a ScanArray 3000 scanner (purchased from General Scanning, USA). The scanned image Imagene software (Biodiscovery, USA) was used for data analysis and processing to calculate the Cy3 / Cy5 ratio of each point.
以上机体特定组织 (或经过刺激的细胞株) 分别为胸腺、 睾丸、 肌肉、 脾脏、 肺、 皮肤、 甲状腺、 肝、 PMA+的 Ecv304细胞株、 PMA -的 Ecv304细胞株、 未饥饿的 L02 细胞株、 砷刺激 1小时的 L02细胞株、 砷刺激 6小时的 L02细胞株前列腺、 心、 肺癌、 胎膀胱、 胎小肠、 胎大肠、 ,¾胸腺、 胎肌、 胎肝、 胎肾、 胎脾、 胎脑、 胎肺以及 胎心。 根据这 26个 Cy3/Cy5比值绘出折方图。 (图 1 ) 。 由图可见本发明所述的人核 糖体 S7蛋白 16和人核糖体 S7蛋白 9表达谱很相似。 工业实用性  The above specific tissues (or stimulated cell lines) are thymus, testis, muscle, spleen, lung, skin, thyroid, liver, PMA + Ecv304 cell line, PMA-Ecv304 cell line, non-starved L02 cell line, L02 cell line stimulated by arsenic for 1 hour, L02 cell line stimulated by arsenic for 6 hours prostate, heart, lung cancer, fetal bladder, fetal small intestine, fetal large intestine, thymus, fetal muscle, fetal liver, fetal kidney, fetal spleen, fetal brain Fetal lung and fetal heart. Draw a graph based on these 26 Cy3 / Cy5 ratios. (figure 1 ) . It can be seen from the figure that the expression profile of human ribosomal S7 protein 16 and human ribosomal S7 protein 9 according to the present invention are very similar. Industrial applicability
本发明的多肽以及该多呔的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗恶性肿瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV 感染和免疫 性疾病等。  The polypeptides of the present invention, as well as the multipeptone antagonists, agonists and inhibitors, can be directly used in the treatment of diseases, for example, they can treat malignant tumors, adrenal deficiency, skin diseases, various types of inflammation, HIV infection, and immune diseases.
蛋白的正确翻译需要各 氨酰基 -tRNA 合成酶、 各种 tRNA 及核糖体共同作 用来完成, 其中核糖体和其他辅助因子在一起提供了翻译过程的全部酶活性, 这些酶活性只有在核糖体整体结构完整的情况下才会具备。 核糖体蛋白 S7 是 核糖体小亚基中的蛋白之一: 对于蛋白质合成起始阶段中正确的 tRNA 选择起 非常重要的作用。 S7 蛋白能够选择正确的 tRNA, 使之与核糖体小亚基结合, 避免错配情况的发生, 直接关系到生物体传代的稳定 。 并且核糖体蛋白缺失 将导致细胞生长速度减慢  The correct translation of proteins requires the cooperation of various aminoacyl-tRNA synthetases, various tRNAs, and ribosomes. Ribosomes and other cofactors together provide the entire enzymatic activity of the translation process. These enzyme activities are only in the entire ribosome Only when the structure is complete. Ribosomal protein S7 is one of the proteins in the small subunit of the ribosome: it plays a very important role in the correct tRNA selection in the initial stages of protein synthesis. The S7 protein can select the correct tRNA to bind to small ribosomal subunits to avoid mismatches, which is directly related to the stability of the passage of the organism. And the loss of ribosomal protein will slow down the growth of cells.
由此可见, 特异的 S7家族蛋白 motif 的表达异常, 将致使本发明的含 S7家 族蛋白 mot if 的多肽的功能失常, 从而导致 mRNA 的错误翻译, 并产生相关的 疾病如肿瘤、 胚胎发育紊乱、 生长发育障碍等。  It can be seen that the abnormal expression of the specific S7 family protein motif will cause the dysfunction of the polypeptide containing the S7 family protein mot if of the present invention, resulting in the mistranslation of mRNA and the generation of related diseases such as tumors, embryonic development disorders, Growth and development disorders.
由此可见, 本发明的人核糖体 S7蛋白 16的表达异常将产生各种疾病尤其是 胚胎发育紊乱症、 生长发育障碍性疾病、 各种肿瘤、 炎症, 这些疾病包括但不 限于:  It can be seen that the abnormal expression of the human ribosomal S7 protein 16 of the present invention will produce various diseases, especially embryonic developmental disorders, growth and development disorders, various tumors, and inflammations. These diseases include, but are not limited to:
胚胎发育紊乱症: 先天 '主流产、 腭裂、 面斜裂、 肢体缺如、 肢体分化障碍、 消化管闭锁或狹窄、 透^ ¾病、 肺膨胀不全、 多囊肾、 异位肾、 双输尿管、 隐 、 先天性腹股沟疝、 双子宫、 阴道闭锁、 尿道下裂、 两性畸形、 房间隔缺损、 室间隔缺损、 ^动脉狭窄、 动脉导管未闭、 神经管缺陷、 先天性脑积水、 虹膜 缺损、 先天性白内障、 先天性青光眼或白内障、 先天性耳聋 Embryonic developmental disorders: congenital 'mainstream births, cleft palate, facial oblique fissures, limb absentness, limb differentiation disorders, gastrointestinal atresia or stenosis, diarrhea, atelectasis, polycystic kidney, ectopic kidney, double ureter, Recessive, congenital inguinal hernia, double uterus, vaginal atresia, hypospadias, hermaphroditism, atrial septal defect, ventricular septal defect, arterial stenosis, arterial duct occlusion, neural tube defect, congenital hydrocephalus, iris Defects, congenital cataract, congenital glaucoma or cataract, congenital deafness
生长发育障碍性疾病: 精神发育迟缓, 脑性瘫痪, 脑发育障碍, 智力障碍, 家族性脑神经核发育 ^全综合症, 斜视, 皮肤、 脂肪和肌肉发育不良性疾病如 先天性皮肤松弛症、 ^老症、 先天性角化不良, 各种代谢缺陷病如各种氨基酸 代谢缺陷症, 呆小症, 侏儒症, 性发育迟缓症  Growth and development disorders: mental retardation, cerebral palsy, brain development disorders, mental retardation, familial cerebral nucleus development syndrome, strabismus, skin, fat, and muscular dysplasia disorders such as congenital skin relaxation, ^ Oldness, congenital keratosis, various metabolic defects such as various amino acid metabolic defects, stunting, dwarfism, sexual retardation
各种组织的肿瘤: 胃癌、 肝癌、 肺癌、 食管癌、 乳腺癌、 白血病、 淋巴瘤、 甲状腺肿瘤、 子宫肌瘤、 成神经细胞瘤、 星形细胞瘤、 室管膜瘤、 胶质细胞瘤、 结肠癌、 恶性组织细胞病、 膀胱癌、 骨癌、 骨肉瘤、 骨髓瘤、 骨髓癌、 脑癌、 子宫癌、 子宫内膜癌、 阻囊癌、 结肠癌、 胸腺肿瘤、 鼻腔及鼻窦肿瘤、 鼻咽癌、 喉癌、 气管肿瘤、 胸膜间皮瘤、 纤维瘤、 纤维肉瘤、 脂肪瘤、 脂肪肉瘤、 平滑 肌瘤  Tumors of various tissues: gastric cancer, liver cancer, lung cancer, esophageal cancer, breast cancer, leukemia, lymphoma, thyroid tumor, uterine fibroids, neuroblastoma, astrocytoma, ependymoma, glioblastoma, Colon cancer, malignant histiocytosis, bladder cancer, bone cancer, osteosarcoma, myeloma, bone marrow cancer, brain cancer, uterine cancer, endometrial cancer, cholecystoma, colon cancer, thymic tumor, nasal cavity and sinus tumor, nose Pharyngeal cancer, Laryngeal cancer, Tracheal tumor, Pleural mesothelioma, Fibroid, Fibrosarcoma, Lipoma, Liposarcoma, Leiomyoma
各种炎症: 应^ 应、 成人呼吸窘迫综合症、 肺嗜酸粒细胞增多症、 风 湿祥关节炎、 类风湿样关节炎、 骨关节炎、 胆囊炎、 肾小球性肾炎、 皮肤肌炎、 多肌炎、 阿狄森氏病、 毛细血管扩张性共济失调症  Various inflammations: stress, adult respiratory distress syndrome, pulmonary eosinophilia, rheumatoid arthritis, rheumatoid arthritis, osteoarthritis, cholecystitis, glomerulonephritis, dermatomyositis, Polymyositis, Addison's disease, telangiectasia
本发明的人核糖体 S7蛋白 16 的表达异常还将产生某些遗传性, 血液性疾病及 免疫系统疾病等。  The abnormal expression of the human ribosomal S7 protein 16 of the present invention will also produce certain hereditary, hematological and immune system diseases.
本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)人核糖体 S7 蛋白 16 的药剂的方法。 激动剂提高人核糖体 S7 蛋白 16 刺激细胞增殖等生 物功能, 而拮抗剂阻 11 治疗与细胞过度增殖有关的紊乱如各种癌症。 例如, 在药物的存在下, ^哺乳动物细胞或表达人核糖体 S7 蛋白 16 的嘆制剂与标 记的人核糖体 S7 蛋白 16 —起培养。 然后 ¾定药物提高或阻遏此相互作用的能 力。  The invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) human ribosomal S7 protein 16. Agonists increase human ribosomal S7 protein 16 to stimulate biological functions such as cell proliferation, while antagonists block 11 to treat disorders related to excessive cell proliferation, such as various cancers. For example, in the presence of a drug, mammalian cells or formulations expressing human ribosomal S7 protein 16 are cultured with labeled human ribosome S7 protein 16. The ability of a given drug to increase or block this interaction is then determined.
人核糖体 S7 蛋白 16 的拮抗剂包括筛选出的抗体、 化合物、 受体缺失物和 类似物等。 人核糖体 蛋白 16 的拮抗剂可以与人核糖体 S7 蛋白 16 结合并消 除其功能, 或是抑制该多肽的产生, 或是与该多肽的活性位点结合使该多肽不 能发挥生物学功能。  Antagonists of human ribosomal S7 protein 16 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human ribosomal protein 16 can bind to human ribosomal S7 protein 16 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot perform biological functions.
在筛选作为拮抗剂的化合物时, 可以将人核糖体 S7 蛋白 16 加入生物分析 测定中 . 通过测定化合物对人核糖体 S7 蛋白 16 和其受体之间相互作用的影响 来确定化合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可以筛选出起拮 抗剂作用的受体缺失物相类似物。 能与人核糖体 S7 蛋白 16 结合的多呔分子可 通过筛选由各种可能 ^合的氨基酸结合于固¾物组成的随机多肽厗^茯得 筛 选时. 一般应对人核 ^ S7蛋白 16 子进行标记 ' 本发明提供了用多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原 以生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供 了针对人核糖体 S7 蛋白 16 抗原决定簇的抗体。 这些抗体包括(但不限于): 多 克隆抗体、 单克隆抗体、 嵌合抗体、 单链抗体、 Fab 片段和 Fab 表达文库产生 的片段。 When screening compounds as antagonists, human ribosomal S7 protein 16 can be added to bioanalytical assays. Whether a compound is an antagonist can be determined by measuring the effect of the compound on the interaction between human ribosome S7 protein 16 and its receptor . In the same manner as described above for screening compounds, analogues of receptor deletions that act as antagonists can be screened. Polynucleotides capable of binding to human ribosomal S7 protein 16 can be obtained by screening random peptides composed of various possible amino acids bound to solids. Generally, human nuclear ^ S7 protein 16 should be screened. mark' The present invention provides a method for producing an antibody using a polypeptide, a fragment, a derivative, an analog thereof, or a cell thereof as an antigen. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies against the human ribosomal S7 protein 16 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
多克隆抗体的生产可用人核糖体 S7 蛋白 16 直接注射免疫动物 (如家兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不限于弗 氏佐剂等。 制备人核糖体 S7 蛋白 16 的单克隆抗体的技术包括但不限于杂交瘤 技术(Kohler and Mi lstein. Nature, 1975, 256: 495-497) , 三瘤技术, 人 B -细 胞杂交瘤技术, EBV-杂交瘤技术等。 将人恒定区和非人源的可变区结合的嵌合 抗体可用已有的技术生产(Morrison et ai , PNAS, 1985, 81: 6851) 0 而已有的生 产单链抗体的技术(U. S. Pat No.4946778)·^可用二生产抗人核糖体 S7 蛋白 16 的单链抗体。 Polyclonal antibodies can be produced by injecting human ribosomal S7 protein 16 directly into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's adjuvant. Wait. Techniques for preparing monoclonal antibodies to human ribosomal S7 protein 16 include, but are not limited to, hybridoma technology (Kohler and Milstein. Nature, 1975, 256: 495-497), triple tumor technology, human B-cell hybridoma technology, EBV -Hybridoma technology, etc. Chimeric antibodies that bind human constant regions to non-human variable regions can be produced using existing techniques (Morrison et ai, PNAS, 1985, 81: 6851). 0 Existing techniques for producing single-chain antibodies (US Pat No. .4946778). Single-chain antibodies against human ribosomal S7 protein 16 can be produced using two.
抗人核糖体 S7 蛋白 16 的抗体可用于免疫组织化学技术中, 检测活检标本 中的人核糖体 S7蛋白 16。  Antibodies against human ribosomal S7 protein 16 can be used in immunohistochemical techniques to detect human ribosomal S7 protein 16 in biopsy specimens.
与人核糖体 S7 蛋白 16 结合的单克隆 体也可用放射性同位素标记, 注入 体内可跟踪其位置和分布。 这种放射':、生标记的抗体可作为一种非创伤性诊断方 法用于肿瘤细胞的定位和判断是否有转移。  Monoclonals that bind to human ribosomal S7 protein 16 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radioactive: bio-labeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
抗体还可用于设计针对体内某一特殊却位的免疫毒素。 如人核糖体 S7蛋白 16 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋白, 红豆 碱等)共价结合。 一种通常的方法是 S巯基交联剂如 SPDP, 攻击抗体的氨基, 通过二硫键的交换, 将毒素结合于抗 上. 这种杂交抗体可用于杀灭人核糖体 S7蛋白 16阳性的细胞。  Antibodies can also be used to design immunotoxins that target a particular but in situ body. For example, human ribosomal S7 protein 16 high-affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.). A common method is an S thiol crosslinker such as SPDP, which attacks the amino group of an antibody and binds the toxin to the antibody through the exchange of disulfide bonds. This hybrid antibody can be used to kill human ribosome S7 protein 16 positive cells .
本发明中的抗体可用于治疗或预^与人核糖体 S7 蛋白 16 相关的疾病。 给 予适当剂量的抗体可以刺激或阻断人核糖体 S7蛋白 16的产生或活性。  The antibodies in the present invention can be used to treat or predict diseases related to human ribosomal S7 protein 16. Administration of an appropriate dose of antibody can stimulate or block the production or activity of human ribosomal S7 protein 16.
本发明还涉及定量和定位检测人 糖 S7 蛋白 16 水平的诊断试验方法。 这些试验是本领域所熟知的, 且包括 FISH : 定和放射免疫测定。 试验中所检测 的人核糖体 S7 蛋白 16 水平, 可以用 解释人核糖体 S7 蛋白 16 在各种疾病中 的重要性和用于诊断人核糖体 S7蛋白 16起 0用的疾病。  The invention also relates to a diagnostic test method for quantitative and localized detection of human sugar S7 protein 16 levels. These tests are well known in the art and include FISH: determination and radioimmunoassay. The level of human ribosomal S7 protein 16 detected in the test can be used to explain the importance of human ribosome S7 protein 16 in various diseases and to diagnose human ribosome S7 protein 16 and other diseases.
本发明的多肽还可用作呔谱分 . m i-- 多肽可用物理的、 化学或酶进行 特异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质谱分 析。 编码人核糖体 S7 蛋白 16 的多核苷酸也可用于多种治疗目的。 基因治疗技 术可用于治疗由于人核糖体 S7蛋白 16 的无表达或异常 /无活性表达所致的细胞 增殖、 发育或代谢异常。 重组的基因治疗载体(如病毒载体)可设计用于表达变 异的人核糖体 S7 蛋白 16, 以抑制内源性的人核糖体 S7 蛋白 16 活性。 例如, 一种变异的人核糖体 S7 蛋白 16 可以是缩短的、 缺失了信号传导功能域的人核 糖体 S7 蛋白 16, 虽可与下游的底物结合, 但缺乏信号传导活性。 因此重组的 基因治疗载体可用于治疗人核糖体 S7 蛋白 16 表达或活性异常所致的疾病。 来 源于病毒的表达载体 ½逆转录病毒、 腺病毒、 腺病毒相关病毒、 单纯疱疹病毒、 细小病毒等可用于将编码人核糖体 S7 蛋白 16 的多核苷酸转移至细胞内。 构建 携带编码人核糖体 S7 蛋白 16 的多核苷酸的重组病毒载体的方法可见于已有文 献(Sambrook, et al. )。 另外重组编码人核糖体 S7 蛋白 16 的多核苷酸可包装到 脂质体中转移至细胞内。 The peptides of the present invention can also be used as spectral spectra. Mi-- Polypeptides can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, preferably mass spectrometry analysis. The polynucleotide encoding human ribosomal S7 protein 16 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of human ribosomal S7 protein 16. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human ribosome S7 protein 16 to inhibit endogenous human ribosome S7 protein 16 activity. For example, a variant human ribosome S7 protein 16 may be a shortened human ribosome S7 protein 16 that lacks a signaling domain. Although it can bind to downstream substrates, it lacks signaling activity. Therefore, the recombinant gene therapy vector can be used to treat diseases caused by abnormal expression or activity of human ribosomal S7 protein 16. Virus-derived expression vectors ½ retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer a polynucleotide encoding human ribosomal S7 protein 16 into cells. Methods for constructing recombinant viral vectors carrying a polynucleotide encoding the human ribosomal S7 protein 16 can be found in existing literature (Sambrook, et al.). In addition, a recombinant polynucleotide encoding human ribosomal S7 protein 16 can be packaged into liposomes and transferred into cells.
多核苷酸导八组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织 中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细胞移植到体内等。  Methods for introducing polynucleotides into tissues or cells include: directly injecting the polynucleotides into tissues in vivo; or introducing the polynucleotides into cells in vitro through a vector (such as a virus, phage, or plasmid), and then introducing the cells Transplanted into the body, etc.
抑制人核糖体 S7 蛋白 16 mRNA的寡核苷酸(包括反义 RNA和 DNA)以及核酶 也在本发明的范围之内。 核酶是一种能特异性分解特定 RNA 的酶样 RNA 分子, 其作用机制是核酶分子与互补的靶 RNA 特异性杂交后进行核酸内切作用。 反义 的 RNA 和 DNA及核酶可用已有的任何 RNA或 DNA合成技术获得, 如固相磷酸酰 胺化学合成法合成寡核苷酸的技术已广泛应用。 反义 RNA分子可通过编码该 RNA 的 DNA 序列在 i 外或体内转录茯得。 这种 DNA 序列已整合到载体的 RNA 聚合酶 启动子的下游。 为了增加核酸分子的稳定性, 可用多种方法对其进行修饰, 如 增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非磷酸二 酯键。  Oligonucleotides (including antisense RNA and DNA) and ribozymes that inhibit human ribosomal S7 protein 16 mRNA are also within the scope of the present invention. A ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation. Antisense RNA, DNA, and ribozymes can be obtained using any existing RNA or DNA synthesis technology, such as the solid-phase phosphoramidite chemical synthesis method for oligonucleotide synthesis. Antisense RNA molecules can be transcribed outside or in vivo by DNA sequences encoding the RNA. This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of the nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphorothioate or peptide bonds instead of phosphodiester bonds.
编码人核糖体 S7 蛋白 16 的多核苷鲮可用于与人核糖体 S7 蛋白 16 的相关 疾病的诊断。 编码人核糖体 S7蛋白 16 的多核苷酸可用于检测人核糖体 S7蛋白 16 的表达与否或在疾病状态下人核糖体 S7 蛋白 16 的异常表达。 如编码人核糖 体 S7蛋白 16的 DNA序列可用于对活检标本进行杂交以判断人核糖体 S7蛋白 16 的表达状况。 杂交技 包括 Southern 印迹法, Northern 印迹法、 原位杂交等。 这些技术方法都是公开的成熟技术, 相关的试剂盒都可从商业途径得到。 本发 明的多核苷酸的一部分或全部可作为探针固定在微阵列(Microarray)或 DNA 芯 (又称为 "基 S芯 " )上. 用亍分析组织中基因的差异表达分析禾口基因诊断。 用人核糖体 S7 蛋白 16 特异的引物进行 RNA-聚合酶链反应(RT - PCR)体外扩增也 可检测人核糖体 S7蛋白 16的转录产物。 Polynucleosides encoding human ribosomal S7 protein 16 can be used for the diagnosis of diseases related to human ribosome S7 protein 16. The polynucleotide encoding human ribosomal S7 protein 16 can be used to detect the expression of human ribosome S7 protein 16 or the abnormal expression of human ribosome S7 protein 16 in a disease state. For example, the DNA sequence encoding human ribosomal S7 protein 16 can be used to hybridize biopsy specimens to determine the expression status of human ribosome S7 protein 16. Hybridization techniques include Southern blotting, Northern blotting, in situ hybridization, and so on. These techniques and methods are publicly available and mature, and related kits are commercially available. A part or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray (Microarray) or a DNA core (also known as a "base S core"). Differential expression of genes in tissues can be analyzed by tritium analysis and gene diagnosis . Human ribosomal S7 protein 16 specific primers can be used for RNA-polymerase chain reaction (RT-PCR) in vitro amplification to detect human ribosomal S7 protein 16 transcription products.
检测人核糖体 S7 蛋白 16基因的突变也可用于诊断人核糖体 S7蛋白 16相 关的疾病。 人核糖体 S7蛋白 16 突变的形式包括与正常野生型人核糖体 S7蛋白 16 DNA 序列相比的点突变、 易位、 缺失、 重组和其它任何异常等。 可用已有的 技术如 Southern 印迹法、 DNA 序列分析、 PCR 和原位杂交检测突变。 另外, 突 变有可能影响蛋白的表达, 因此用 Northern 印迹法、 Western 印迹法可间接判 断基因有无突变。  Detection of mutations in the human ribosomal S7 protein 16 gene can also be used to diagnose human ribosome S7 protein 16-related diseases. Human ribosome S7 protein 16 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human ribosome S7 protein 16 DNA sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR, and in situ hybridization. In addition, mutations may affect the expression of proteins, so Northern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人 染色体具体位置且并可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体 位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用 于标记染色体位置。 根据本 ^明. 为了将这些序列与疾病相关基因相关联, 其 重要的第一步就是将这些 DNA序列定位于染色体上。  The sequences of the invention are also valuable for chromosome identification. The sequence specifically targets a specific position on a human chromosome and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for marking chromosome positions. According to this article, in order to associate these sequences with disease-related genes, the important first step is to locate these DNA sequences on the chromosome.
简而言之, 拫据 cDNA制备 PCR引物(优选 15- 35bp), 可以将序列定位于染色 体上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只 有那些含有相应于引物的人基因的杂合细胞会产生扩增的片段。  In short, PCR primers (preferably 15-35bp) can be used to prepare sequences based on cDNA, which can be used to locate sequences on chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DNA定位到具体染色体的快捷方法。 使 用本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段 或大量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位 杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。  PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes. Using the oligonucleotide primers of the present invention, in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
将 c D N A克隆与中期染色体进行荧光原位杂交( F I S H ) . 可以在一 A步骤中精 确地进行染色体定位。 此技术的综述, 参见 Verma等, Human Chromosomes: a Manual of Basic Techniques, Pergamon Press, New York (1988)。  The c D N A clone was subjected to fluorescence in situ hybridization (F I S H) with the metaphase chromosome. The chromosome localization can be accurately performed in a step A. For a review of this technique, see Verma et al., Human Chromosomes: a Manual of Basic Techniques, Pergamon Press, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可 以与基因图数据相关联。 这些数据可见亍例如, V. Mckusick, Mendel ian Inheritance in Man (可通过与 Johns Hopkins University Welch Medical Library联机获得)。 然后可通过连锁分析, 确定基因与业已定位到染色体区域 上的疾病之间的关系。  Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendel ian Inheritance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
接着, 需要测定患病 未患病个体间的 cDNA或基因组序^差异。 如果在一 些或^有的患病 体中观察到某突变. 而该突变在任何正常八体中未观察到, 则该 变可能是疾病的病: 1K 较患病和未患病 、体, 通常: '步及首先寻找染色 体中结构的变化, 如从染色体水平可见的或用基于 c DNA序列的 PCR可检测的缺 失或易位。 根据目前的物理作图和基 定位技术的分辨能力, 被精确定位至与 疾病有关的染色体区域的 cDNA , 可以是 5 0至 5 00个潜在致病基因间之一种(假定 1兆碱基作图分辨能力和每 2 0kb对应于一个基因)。 Next, the differences in cDNA or genomic sequence between the affected and unaffected individuals need to be determined. If a mutation is observed in some or some patients, and the mutation is not observed in any normal eight body, then the mutation may be a disease of the disease: 1K is more diseased and not diseased, usually, : 'Step and first look for staining Structural changes in the body, such as deletions or translocations that are visible from the chromosomal level or detectable with c DNA sequence-based PCR. According to the resolution capabilities of current physical mapping and base mapping technology, the cDNA accurately mapped to the disease-related chromosomal region can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase Figure resolution and each 20kb corresponds to a gene).
可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与 合适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲 液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响 药物效果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多 种本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药 品或生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用 或销售的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它 的治疗化合物结合使用。  The invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell. In addition, the polypeptides of the invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药. 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻 内或皮内的给药途径。 人核糖体 S 7蛋白 1 6以有效地治疗和 /或预防具体的适应症的量 来给药。 施用于患者的人核糖体 S 7蛋白 1 6的量和剂量范围将取决于许多因素, 如给药 方式、 待治疗者的健康条件和诊断医生的判断 The pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration. Human ribosomal S 7 protein 16 is administered in an amount effective to treat and / or prevent a specific indication. The amount and range of human ribosomal S 7 protein 16 to be administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician

Claims

权 利 要 求 书 Claim
1、 一种分离的多肽 -人核糖体 S7蛋白 16, 其特征在于它包含有: SEQ ID N0: 2 所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生物。 1. An isolated polypeptide-human ribosomal S7 protein 16, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2 or an active fragment, analog or derivative thereof.
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的氨基 酸序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。 2. The polypeptide according to claim 1, characterized in that the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如权利要求 2所述的多肽, 其特征在于它包含具有 SEQ ID N0: 2所示的氨基 酸序列的多钛。  3. The polypeptide according to claim 2, characterized in that it comprises a polytitanium having the amino acid sequence shown in SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一种: (a) 编码具有 SEQ ID NO: 2 所示氨基酸序列的多肽或其片段、 类似物、 衍生 物的多核苷酸;  4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of: (a) encoding a polypeptide having the amino acid sequence shown in SEQ ID NO: 2 or a fragment thereof, or an analog thereof; Polynucleotides of derivatives;
(b) 与多 ¾苷酸 ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to a polyglycolic acid; or
(c) 与 ( a ) 或 ( b) 有至少 70%相同性的多核苷酸。  (c) A polynucleotide that is at least 70% identical to (a) or (b).
5、 如权利要求 4 所述的多核苷酸, 其特征在于所述多核苷酸包含编码具有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2.
6、如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸的序列包含有 SEQ ID NO: 1 中 801-1229位的序列或 SEQ ID NO: 1 中 1-2533位的序列。  6. The polynucleotide according to claim 4, characterized in that the sequence of the polynucleotide comprises the sequence of positions 801-2229 in SEQ ID NO: 1 or the sequence of positions 1-2533 in SEQ ID NO: 1 .
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4-6 中的 任一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重组载 体。  7. A recombination vector containing an exogenous polynucleotide, characterized in that it is a recombination constructed by the polynucleotide according to any one of claims 4-6 and a plasmid, virus or a carrier expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选 §于 列一种宿主 S3胞:  8. A genetically engineered host cell containing an exogenous polynucleotide, which is characterized in that it is selected from a host S3 cell:
(a) 用权利要求 7所述的重组载体转化或转导的宿主细胞; 或  (a) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用权利要求 4-6 中的任一权利要求所述多核苷酸转化或转导的宿主 胞。  (b) a host cell transformed or transduced with a polynucleotide according to any one of claims 4-6.
9、 一种具有人核糖体 S7 蛋白 16 活性的多肽的制备方法, 其特征在于所述方 法包括:  9. A method for preparing a polypeptide having human ribosomal S7 protein 16 activity, characterized in that the method includes:
(a) 在表辻人核糖体 S7 蛋白 16 条件下, 培养权利要求 8 所述的工程化宿主 细胞;  (a) culturing the engineered host cell according to claim 8 under the conditions of epidermal human ribosome S7 protein 16;
(b) 从培养物中分离出具有人核糖体 S7蛋白 16活性的多肽。  (b) Isolating a polypeptide having human ribosomal S7 protein 16 activity from the culture.
10、 一种能与多肽结合的抗体,其特征在于所述抗体是能与人核糖体 S7 蛋白 16 10. An antibody capable of binding to a polypeptide, characterized in that the antibody is capable of binding to human ribosomal S7 protein 16
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制人核糖体 S7蛋白 16的活性的化合物。 11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of human ribosomal S7 protein 16.
12、 如权利要求 11所述的化合物, 其特征在于它是 SEQ ID NO: 1 所示的多核苷 酸序列或其片段的反义序列。  12. The compound according to claim 11, characterized in that it is an antisense sequence of a polynucleotide sequence or a fragment thereof as shown in SEQ ID NO: 1.
13、 一种权利要求 11 所述化合物的应用, 其特征在于所述化合物用于调节人 核糖体 S7蛋白 16在体内、 体外活性的方法。 13. Use of a compound according to claim 11, characterized in that the compound is used for a method for regulating the activity of human ribosomal S7 protein 16 in vivo and in vitro.
14、 一种检测与权利要求 1-3 中的任一权利要求所述多肽相关的疾病或疾病易 感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多肽的 活性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变异。  14. A method for detecting a disease or susceptibility to a disease associated with a polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the activity of the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如权利要求 1-3 中的任一权利要求所述多肽的应用, 其特征在于它应用于 筛选人核糖体 S7 蛋白 16 的模拟物、 激动剂, 拮抗剂或抑制剂; 或者用于肽指 紋图谱鉴定。 15. Use of a polypeptide according to any one of claims 1-3, characterized in that it is used for screening mimetics, agonists, antagonists or inhibitors of human ribosomal S7 protein 16; or for peptides Fingerprint identification.
16、 如权利要求 4-6 中的任一权利要求所述的核酸分子的应用, 其特征在于它 作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造基因 芯片或微阵列。  16. The use of a nucleic acid molecule according to any one of claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing a gene chip Or microarray.
17、 如权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物 的应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂或抑 制剂以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与人核糖体 S7 蛋白 16异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or mimetic, agonist, antagonist is used Or the inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with human ribosomal S7 protein 16 abnormality.
18、 权利要求 1-6 及 11 中的任一权利要求所述的多钛、 多核苷酸或化合物的 应用, 其特征在于用所述多肽、 多核苷酸或化合物 备用于治疗如恶性肿瘤, 血液病, HIV感染和免疫性疾病和各类炎症的药物。 18. Use of a polytitanium, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that said polypeptide, polynucleotide or compound is prepared for use in treating malignant tumors, blood, etc. Disease, HIV infection and immune diseases and drugs of various inflammations.
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