WO2001051659A3 - Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders - Google Patents

Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders Download PDF

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Publication number
WO2001051659A3
WO2001051659A3 PCT/IB2001/000116 IB0100116W WO0151659A3 WO 2001051659 A3 WO2001051659 A3 WO 2001051659A3 IB 0100116 W IB0100116 W IB 0100116W WO 0151659 A3 WO0151659 A3 WO 0151659A3
Authority
WO
WIPO (PCT)
Prior art keywords
biallelic markers
genes involved
genomic regions
nervous system
central nervous
Prior art date
Application number
PCT/IB2001/000116
Other languages
French (fr)
Other versions
WO2001051659A2 (en
Inventor
Tom Chu
Marta Blumenfeld
Daniel Cohen
Original Assignee
Genset Sa
Tom Chu
Marta Blumenfeld
Daniel Cohen
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Genset Sa, Tom Chu, Marta Blumenfeld, Daniel Cohen filed Critical Genset Sa
Priority to CA002395240A priority Critical patent/CA2395240A1/en
Priority to EP01901330A priority patent/EP1285088A2/en
Priority to AU26999/01A priority patent/AU2699901A/en
Publication of WO2001051659A2 publication Critical patent/WO2001051659A2/en
Publication of WO2001051659A3 publication Critical patent/WO2001051659A3/en

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/106—Pharmacogenomics, i.e. genetic variability in individual responses to drugs and drug metabolism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/172—Haplotypes

Abstract

The invention provides polynucleotides including biallelic markers derived from genes involved in CNS disorders and from genomic regions flanking those genes. Primers hybridizing to regions flanking these biallelic markers are also provided. This invention also provides polynucleotides and methods suitable for genotyping a nucleic acid containing sample for one or more biallelic markers of the invention. Further, the invention provides methods to detect a statistical correlation between a biallelic marker allele and a phenotype and/or between a biallelic marker haplotype and a phenotype.
PCT/IB2001/000116 2000-01-13 2001-01-11 Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders WO2001051659A2 (en)

Priority Applications (3)

Application Number Priority Date Filing Date Title
CA002395240A CA2395240A1 (en) 2000-01-13 2001-01-11 Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders
EP01901330A EP1285088A2 (en) 2000-01-13 2001-01-11 Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders
AU26999/01A AU2699901A (en) 2000-01-13 2001-01-11 Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US17585400P 2000-01-13 2000-01-13
US60/175,854 2000-01-13

Publications (2)

Publication Number Publication Date
WO2001051659A2 WO2001051659A2 (en) 2001-07-19
WO2001051659A3 true WO2001051659A3 (en) 2002-12-05

Family

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Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/IB2001/000116 WO2001051659A2 (en) 2000-01-13 2001-01-11 Biallelic markers derived from genomic regions carrying genes involved in central nervous system disorders

Country Status (4)

Country Link
EP (1) EP1285088A2 (en)
AU (1) AU2699901A (en)
CA (1) CA2395240A1 (en)
WO (1) WO2001051659A2 (en)

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Publication number Priority date Publication date Assignee Title
CA2401749A1 (en) 2000-03-23 2001-09-27 Elan Pharmaceuticals, Inc. Compounds and methods to treat alzheimer's disease
US20060088835A1 (en) * 2002-04-05 2006-04-27 Pickard Benjamin S Schizophrenia associated genes
AU2003243151A1 (en) 2002-08-16 2004-03-03 Agensys, Inc. Nucleic acid and corresponding protein entitled 251p5g2 useful in treatment and detection of cancer
US7927840B2 (en) 2006-09-11 2011-04-19 Gen Probe Incorporated Method for detecting West Nile Virus nucleic acids in the 3′ non-coding region
EP2977470B1 (en) 2002-10-16 2018-01-03 Gen-Probe Incorporated Compositions and methods for detecting west nile virus
US20090291432A1 (en) * 2004-06-01 2009-11-26 Queensland University Of Technology Genetic profiles associated with the 957C>T polymorphism in the DRD2 gene
AU2006246116A1 (en) * 2005-05-11 2006-11-16 Aarhus Universitet Method for diagnosis and treatment of a mental disease
KR100818275B1 (en) * 2006-09-26 2008-03-31 삼성전자주식회사 Primer set for amplifying target sequences of Norovirus probe set specifically hybridizable with the target sequences of Norovirus microarray having the immobilized probe set and method for detecting the presence of Norovirus using the probe set
WO2008086579A1 (en) * 2007-01-19 2008-07-24 Queensland University Of Technology Diagnostic methods and agents
EP2897608B1 (en) * 2013-04-22 2018-08-22 InnoBioscience, LLC Treatment of alzheimer's and cognitive impairment with andrographolides
ES2917181T3 (en) * 2015-07-10 2022-07-07 Ionis Pharmaceuticals Inc Diacylglycerol acyltransferase 2 (DGAT2) modulators

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1999054500A2 (en) * 1998-04-21 1999-10-28 Genset Biallelic markers for use in constructing a high density disequilibrium map of the human genome

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1999054500A2 (en) * 1998-04-21 1999-10-28 Genset Biallelic markers for use in constructing a high density disequilibrium map of the human genome

Non-Patent Citations (7)

* Cited by examiner, † Cited by third party
Title
CHEN Y S ET AL.: "A single nucleotide polymorphism map of a bipolar disorder candidate region on chromosome 18q21.3-22.1", THE AMERICAN JOURNAL OF HUMAN GENETICS, vol. 65, no. 4, October 1999 (1999-10-01), pages A245, XP008001465 *
DATABASE EMBL european molecular biology laboratory; 15 March 1999 (1999-03-15), ZHAO S ET AL.: "Use of BAC end sequences from library RPCI-11 for sequence-ready map building", XP002193666 *
HONG C-J ET AL.: "Association analysis of the 5-HT6 receptor polymorphism (C267T) in mood disorders", AMERICAN JOURNAL OF MEDICAL GENETICS (NEUROPSYCHIATRIC GENETICS), vol. 88, 15 December 1999 (1999-12-15), pages 601 - 602, XP008001533 *
KRUGLYAK L: "THE USE OF A GENETIC MAP OF BIALLELIC MARKERS IN LINKAGE STUDIES", NATURE GENETICS, NEW YORK, NY, US, vol. 17, 1997, pages 21 - 24, XP000920766, ISSN: 1061-4036 *
SHINKAI T ET AL.: "Association study of the 5-HT6 receptor gene in Schizophrenia", AMERICAN JOURNAL OF MEDICAL GENETICS (NEUROPSYCHIATRIC GENETICS), vol. 88, 16 April 1999 (1999-04-16), pages 120 - 122, XP008001467 *
SYVÄNEN A-CH ET AL: "IDENTIFICATION OF INDIVIDUALS BY ANALYSIS OF BIALLELIC DNA MARKERS,USING PCR AND SOLID-PHASE MINISEQUENCING", AMERICAN JOURNAL OF HUMAN GENETICS, UNIVERSITY OF CHICAGO PRESS, CHICAGO,, US, vol. 52, no. 1, 1993, pages 46 - 59, XP002050638, ISSN: 0002-9297 *
TSAI S-J ET AL.: "Association analysis of the 5-HT6 receptor polymorphism C267T in Alzheimer's disease", NEUROSCIENCE LETTERS, vol. 276, 1999, pages 138 - 139, XP001066217 *

Also Published As

Publication number Publication date
WO2001051659A2 (en) 2001-07-19
CA2395240A1 (en) 2001-07-19
EP1285088A2 (en) 2003-02-26
AU2699901A (en) 2001-07-24

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