WO1998021341B1 - Method for the recombinant production of 1,3-propanediol - Google Patents
Method for the recombinant production of 1,3-propanediolInfo
- Publication number
- WO1998021341B1 WO1998021341B1 PCT/US1997/020873 US9720873W WO9821341B1 WO 1998021341 B1 WO1998021341 B1 WO 1998021341B1 US 9720873 W US9720873 W US 9720873W WO 9821341 B1 WO9821341 B1 WO 9821341B1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- protein
- nucleic acid
- acid encoding
- microorganism
- seq
- Prior art date
Links
- YPFDHNVEDLHUCE-UHFFFAOYSA-N 1,3-Propanediol Chemical compound OCCCO YPFDHNVEDLHUCE-UHFFFAOYSA-N 0.000 title claims abstract 22
- 229920000166 polytrimethylene carbonate Polymers 0.000 title claims abstract 11
- 108090000623 proteins and genes Proteins 0.000 claims abstract 24
- 102000004169 proteins and genes Human genes 0.000 claims abstract 24
- 101710044921 A1G_03605 Proteins 0.000 claims abstract 16
- 101710016786 P/C Proteins 0.000 claims abstract 16
- 101700068398 PABT Proteins 0.000 claims abstract 16
- 101710045114 PX Proteins 0.000 claims abstract 16
- 101700028070 VPX Proteins 0.000 claims abstract 16
- 101700085341 YTSF Proteins 0.000 claims abstract 16
- 108010065027 Propanediol Dehydratase Proteins 0.000 claims abstract 7
- 108010025885 glycerol dehydratase Proteins 0.000 claims abstract 7
- OKTJSMMVPCPJKN-UHFFFAOYSA-N carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims abstract 6
- 229910052799 carbon Inorganic materials 0.000 claims abstract 6
- 244000005700 microbiome Species 0.000 claims 29
- 108020004707 nucleic acids Proteins 0.000 claims 24
- 150000007523 nucleic acids Chemical class 0.000 claims 24
- 229940035437 1,3-propanediol Drugs 0.000 claims 8
- 241000222120 Candida <Saccharomycetales> Species 0.000 claims 6
- 241000193403 Clostridium Species 0.000 claims 6
- 241000235648 Pichia Species 0.000 claims 6
- 241000607142 Salmonella Species 0.000 claims 6
- 206010039447 Salmonellosis Diseases 0.000 claims 6
- 241000228212 Aspergillus Species 0.000 claims 3
- 241000193830 Bacillus <bacterium> Species 0.000 claims 3
- 241000588923 Citrobacter Species 0.000 claims 3
- 241000235035 Debaryomyces Species 0.000 claims 3
- 241000588914 Enterobacter Species 0.000 claims 3
- 241000588722 Escherichia Species 0.000 claims 3
- 241000235649 Kluyveromyces Species 0.000 claims 3
- 241000186660 Lactobacillus Species 0.000 claims 3
- 229940039696 Lactobacillus Drugs 0.000 claims 3
- 241000589350 Methylobacter Species 0.000 claims 3
- 241000235395 Mucor Species 0.000 claims 3
- 241000589516 Pseudomonas Species 0.000 claims 3
- 241000235070 Saccharomyces Species 0.000 claims 3
- 241000235346 Schizosaccharomyces Species 0.000 claims 3
- 241000187747 Streptomyces Species 0.000 claims 3
- 241000235017 Zygosaccharomyces Species 0.000 claims 3
- WQZGKKKJIJFFOK-GASJEMHNSA-N D-Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 claims 1
- 241000588724 Escherichia coli Species 0.000 claims 1
- 230000036499 Half live Effects 0.000 claims 1
- 239000008103 glucose Substances 0.000 claims 1
- 125000002791 glucosyl group Chemical group C1([C@H](O)[C@@H](O)[C@H](O)[C@H](O1)CO)* 0.000 claims 1
- 150000004676 glycans Polymers 0.000 claims 1
- 150000002772 monosaccharides Chemical class 0.000 claims 1
- 229920001542 oligosaccharide Polymers 0.000 claims 1
- 150000002482 oligosaccharides Polymers 0.000 claims 1
- 229920001282 polysaccharide Polymers 0.000 claims 1
- 239000005017 polysaccharide Substances 0.000 claims 1
- 150000004804 polysaccharides Polymers 0.000 claims 1
- 239000000758 substrate Substances 0.000 claims 1
- 229920003013 deoxyribonucleic acid Polymers 0.000 abstract 1
Abstract
The present invention provides an improved method for the production of 1,3-propanediol from a variety of carbon sources is an organism comprising DNA encoding protein X of a dehydratase or protein X in combination with at least one of protein 1, protein 2 and protein 3. The protein X may be isolated from a diol dehydratase or a glycerol dehydratase. The present invention also provides host cells comprising protein X that are capable of increased production of 1,3-propanediol.
Claims
1. An improved method for the production of 1 ,3-propanediol from a microorganism comprising the steps of: a) obtaining a recombinant microorganism capable of producing 1 ,3- propanediol, said microorganism comprising at least one nucleic acid encoding a dehydratase activity and a nucleic acid encoding protein X; and b) culturing the recombinant microorganism in the presence of at least one carbon source capable of being converted to 1 ,3 propanediol in said transformed microorganism and under conditions suitable for the production of 1 ,3 propanediol wherein the carbon source is selected from the group consisting of monosaccharides, oligosaccharides, polysaccharides, and a one carbon substrate.
2. The method of Claim 1 wherein said recombinant microorganism comprises at least one nucleic acid encoding a protein selected from the group consisting of protein 1 , protein 2 and protein 3.
3. The method of Claim 1 further comprising the step of recovering the 1 ,3 propanediol.
4. The method of Claim 1 wherein the nucleic acid encoding protein X is isolated from a glycerol dehydratase gene cluster.
5. The method of Claim 1 wherein the nucleic acid encoding protein X is isolated from a diol dehydratase gene cluster.
6. The method of Claim 4 wherein the glycerol dehydratase gene cluster is from an organism selected from the genera consisting of Kiebsiella and Citrobactor.
7. The method of Claim 5 wherein the diol dehydratase gene cluster is from an organism selected from the genera consisting of Kiebsiella, Clostridium and Salmonella.
8. The method of Claim 1 wherein the nucleic acid encoding a dehydratase activity is heterologous to the organism.
9. The method of Claim 1 wherein the nucleic acid encoding a dehydratase activity is homologous to the organism. ΓÇö 106 ΓÇö
10. The method of Claim 1 wherein the recombinant microorganism is selected from the group of genera consisting of Citrobacter, Enterobacter, Clostridium, Kiebsiella, Aerobacter, Lactobacillus, Aspergillus, Saccharomyces, Schizosaccharomyces, Zygo saccharomyces, Pichia, Kluyveromyces, Candida, Hansenula, Debaryomyces, Mucor, Torulopsis, Methylobacter, Escherichia, Salmonella, Bacillus, Streptomyces and Pseudomonas.
11. The method of Claim 10 wherein the microorganism is selected from the group consisting of E.coli and Kiebsiella spp.
12. The method of Claim 1 wherein the nucleic acid encoding protein X is stably maintained in the host genome.
13. The method of Claim 2 wherein at least one nucleic acid encoding a protein selected from protein 1 , protein 2 and protein 3 is stably maintained in the host genome.
14. The method of Claim 1 wherein the carbon source is glucose.
15. The method of Claim 1 wherein the nucleic acid encoding protein X has the sequence as shown in SEQ ID NO: 59.
16. The method of Claim 2 wherein protein 1 has the sequence as shown in SEQ ID NO: 60 or SEQ ID NO: 61.
17. The method of Claim 2 wherein protein 2 has the sequence as shown in SEQ ID NO: 62 or SEQ ID NO: 63.
18. The method of Claim 2 wherein protein 3 has the sequence as shown in SEQ ID NO:64 or SEQ ID NO: 65.
19. A recombinant microorganism capable of producing 1 ,3-propanediol from a carbon source said recombinant microorganism comprising a) at least one nucleic acid encoding a dehydratase activity; b) at least one nucleic acid encoding a glycerol-3-phosphatase; and c) at least one nucleic acid encoding protein X.
20. The recombinant microorganism of Claim 19 further comprising d) at least one nucleic acid encoding a protein selected from the group consisting of protein 1 , protein 2 and protein 3. ΓÇö 107 ΓÇö
21. The recombinant microorganism of Claim 19 selected from the group consisting of Citrobacter, Enterobacter, Clostridium, Kiebsiella, Aerobacter, Lactobacillus, Aspergillus, Saccharomyces, Schizosaccharomyces, Zygosaccharomyces, Pichia, Kluyveromyces, Candida, Hansenula, Debaryomyces, Mucor, Torulopsis, Methylobacter, Escherichia, Salmonella, Bacillus, Streptomyces and Pseudomonas.
22. The recombinant microorganism of Claim 19 wherein the nucleic acid encoding protein X is isolated from a glycerol dehydratase gene cluster.
23. The recombinant microorganism of Claim 19 wherein the nucleic acid encoding protein X is isolated from a diol dehydratase gene cluster.
24. The recombinant microorganism of Claim 22 wherein the glycerol dehydratase gene cluster is from an organism selected from the genera consisting of Kiebsiella and Citrobactor.
25. The recombinant microorganism of Claim 23 wherein the diol dehydratase gene cluster is from an organism selected from the genera consisting of Kiebsiella, Clostridium and Salmonella.
26. The recombinant microorganism of Claim 19 wherein said dehydratase activity is heterologous to said microorganism.
27. The recombinant microorganism of Claim 19 wherein said dehydratase activity is homologous to said microorganism.
28. The recombinant microorganism of Claim 19 wherein the nucleic acid encoding protein X has the sequence as shown in SEQ ID NO: 59.
29. The recombinant microorganism of Claim 20 wherein protein 1 has the sequence as shown in SEQ ID NO: 60 or SEQ ID NO: 61.
30. The recombinant microorganism of Claim 20 wherein protein 2 has the sequence as shown in SEQ ID NO: 62 or SEQ ID NO: 63. ΓÇö 108 ΓÇö
31. The recombinant of Claim 20 wherein protein 3 has the sequence as shown in SEQ ID: 64 or SEQ ID NO: 65.
32. A method for extending the half-life of dehydratase activity in a transformed microorganism capable of producing 1 ,3-propanediol and containing at least one nucleic acid encoding a dehydratase activity, comprising the step of introducing a nucleic acid encoding protein X into said microorganism and culturing under conditions suitable for production of 1 ,3- propanediol.
33. The method of Claim 32 wherein the nucleic acid encoding the dehydratase activity is heterologous to said microorganism.
34. The method of Claim 32 wherein the nucleic acid encoding the dehydratase activity is homologous to said microorganism.
35. The method of Claim 32 wherein the nucleic acid encoding protein X is isolated from a glycerol dehydratase gene cluster.
36. The method of Claim 32 wherein the nucleic acid encoding protein X is isolated from a diol dehydratase gene cluster.
37. The method of Claim 35 wherein the glycerol dehydratase gene cluster is from an organism selected from the genera consisting of Kiebsiella and Citrobactor.
38. The method of Claim 34 wherein the diol dehydratase gene cluster is from an organism selected from the genera consisting of Kiebsiella, Clostridium and Salmonella.
39. The method of Claim 32 wherein the microorganism is selected from the group consisting of Citrobacter, Enterobacter, Clostridium, Kiebsiella, Aerobacter, Lactobacillus, Aspergillus, Saccharomyces, Schizosaccharomyces, Zygosaccharomyces, Pichia, Kluyveromyces, Candida, Hansenula, Debaryomyces, Mucor, Torulopsis, Methylobacter, Escherichia, Salmonella, Bacillus, Streptomyces and Pseudomonas.
40. The method of Claim 32 further comprising the step of introducing at least one nucleic acid encoding protein 1 , protein 2 or protein 3 into said microorganism.
Priority Applications (9)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
BRPI9714313-8A BR9714313B1 (en) | 1996-11-13 | 1997-11-13 | METHOD FOR THE PRODUCTION OF 1,3-PROPANODIOL RECOMBINANTS |
NZ335392A NZ335392A (en) | 1996-11-13 | 1997-11-13 | Method for the recombinant production of 1,3-propanediol |
AU55076/98A AU735080B2 (en) | 1996-11-13 | 1997-11-13 | Method for the recombinant production of 1,3-propanediol |
DE69736070T DE69736070T2 (en) | 1996-11-13 | 1997-11-13 | Recombinant method of preparation of 1,3-propanediol |
JP52287098A JP2001503636A (en) | 1996-11-13 | 1997-11-13 | Method for recombinant production of 1,3-propanediol |
DK97951433T DK0946732T3 (en) | 1996-11-13 | 1997-11-13 | Process for the Recombinant Preparation of 1,3-Propanediol |
US09/308,207 US6953684B2 (en) | 1996-11-13 | 1997-11-13 | Method for the recombinant production of 1,3-propanediol |
CA002270906A CA2270906A1 (en) | 1996-11-13 | 1997-11-13 | Method for the recombinant production of 1,3-propanediol |
EP97951433A EP0946732B1 (en) | 1996-11-13 | 1997-11-13 | Method for the recombinant production of 1,3-propanediol |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US3060196P | 1996-11-13 | 1996-11-13 | |
US60/030,601 | 1996-11-13 |
Publications (3)
Publication Number | Publication Date |
---|---|
WO1998021341A2 WO1998021341A2 (en) | 1998-05-22 |
WO1998021341A3 WO1998021341A3 (en) | 1998-06-25 |
WO1998021341B1 true WO1998021341B1 (en) | 1998-07-30 |
Family
ID=21854996
Family Applications (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US1997/020292 WO1998021339A1 (en) | 1996-11-13 | 1997-11-10 | Method for the production of 1,3-propanediol by recombinant organisms |
PCT/US1997/020873 WO1998021341A2 (en) | 1996-11-13 | 1997-11-13 | Method for the recombinant production of 1,3-propanediol |
Family Applications Before (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US1997/020292 WO1998021339A1 (en) | 1996-11-13 | 1997-11-10 | Method for the production of 1,3-propanediol by recombinant organisms |
Country Status (18)
Country | Link |
---|---|
US (3) | US6013494A (en) |
EP (2) | EP0942989B1 (en) |
JP (2) | JP4327909B2 (en) |
KR (1) | KR100509310B1 (en) |
CN (2) | CN1236063C (en) |
AT (2) | ATE452979T1 (en) |
AU (2) | AU733534B2 (en) |
BR (2) | BR9712761B1 (en) |
CA (2) | CA2269088C (en) |
DE (2) | DE69739715D1 (en) |
DK (1) | DK0946732T3 (en) |
ES (1) | ES2336858T3 (en) |
ID (1) | ID21487A (en) |
IL (2) | IL129722A0 (en) |
MY (1) | MY131754A (en) |
NZ (1) | NZ335392A (en) |
WO (2) | WO1998021339A1 (en) |
ZA (1) | ZA9710194B (en) |
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