WO1992010496A1 - NUCLEOSIDES DE β-L-(-)-1,3-OXATHIOLANE ENANTIOMERIQUEMENT PURS - Google Patents

NUCLEOSIDES DE β-L-(-)-1,3-OXATHIOLANE ENANTIOMERIQUEMENT PURS Download PDF

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Publication number
WO1992010496A1
WO1992010496A1 PCT/US1991/009123 US9109123W WO9210496A1 WO 1992010496 A1 WO1992010496 A1 WO 1992010496A1 US 9109123 W US9109123 W US 9109123W WO 9210496 A1 WO9210496 A1 WO 9210496A1
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protected
oxathiolane
gulose
thioanhydro
dideoxy
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PCT/US1991/009123
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English (en)
Inventor
Chung K. Chu
J. Warren Beach
Lak-Shin Jeong
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University Of Georgia Research Foundation, Inc.
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Priority claimed from US07/622,762 external-priority patent/US5179104A/en
Application filed by University Of Georgia Research Foundation, Inc. filed Critical University Of Georgia Research Foundation, Inc.
Publication of WO1992010496A1 publication Critical patent/WO1992010496A1/fr

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/70Carbohydrates; Sugars; Derivatives thereof
    • A61K31/7042Compounds having saccharide radicals and heterocyclic rings
    • A61K31/7052Compounds having saccharide radicals and heterocyclic rings having nitrogen as a ring hetero atom, e.g. nucleosides, nucleotides
    • A61K31/706Compounds having saccharide radicals and heterocyclic rings having nitrogen as a ring hetero atom, e.g. nucleosides, nucleotides containing six-membered rings with nitrogen as a ring hetero atom
    • A61K31/7064Compounds having saccharide radicals and heterocyclic rings having nitrogen as a ring hetero atom, e.g. nucleosides, nucleotides containing six-membered rings with nitrogen as a ring hetero atom containing condensed or non-condensed pyrimidines
    • A61K31/7076Compounds having saccharide radicals and heterocyclic rings having nitrogen as a ring hetero atom, e.g. nucleosides, nucleotides containing six-membered rings with nitrogen as a ring hetero atom containing condensed or non-condensed pyrimidines containing purines, e.g. adenosine, adenylic acid
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/66Phosphorus compounds
    • A61K31/675Phosphorus compounds having nitrogen as a ring hetero atom, e.g. pyridoxal phosphate
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/70Carbohydrates; Sugars; Derivatives thereof
    • A61K31/7028Compounds having saccharide radicals attached to non-saccharide compounds by glycosidic linkages
    • A61K31/7034Compounds having saccharide radicals attached to non-saccharide compounds by glycosidic linkages attached to a carbocyclic compound, e.g. phloridzin
    • A61K31/704Compounds having saccharide radicals attached to non-saccharide compounds by glycosidic linkages attached to a carbocyclic compound, e.g. phloridzin attached to a condensed carbocyclic ring system, e.g. sennosides, thiocolchicosides, escin, daunorubicin
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D327/00Heterocyclic compounds containing rings having oxygen and sulfur atoms as the only ring hetero atoms
    • C07D327/02Heterocyclic compounds containing rings having oxygen and sulfur atoms as the only ring hetero atoms one oxygen atom and one sulfur atom
    • C07D327/04Five-membered rings
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D411/00Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen and sulfur atoms as the only ring hetero atoms
    • C07D411/02Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen and sulfur atoms as the only ring hetero atoms containing two hetero rings
    • C07D411/04Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen and sulfur atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring-member bond
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D473/00Heterocyclic compounds containing purine ring systems
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D497/00Heterocyclic compounds containing in the condensed system at least one hetero ring having oxygen and sulfur atoms as the only ring hetero atoms
    • C07D497/02Heterocyclic compounds containing in the condensed system at least one hetero ring having oxygen and sulfur atoms as the only ring hetero atoms in which the condensed system contains two hetero rings
    • C07D497/08Bridged systems

Definitions

  • This invention is in the area of the organic synthesis of nucleosides, and in particular relates to a process for the preparation of enantiomerically pure ⁇ -L-1,3-oxathiolane nucleosides.
  • a nucleoside is a molecule consisting of a 5-carbon sugar and a purine or pyrimidine base.
  • RNA ribonucleic acid
  • DNA deoxyribonucleic acid
  • HIV is believed to be the etiological cause of acquired immunodeficiency syndrome (AIDS).
  • AIDS acquired immunodeficiency syndrome
  • CS-87 3'-azido-2',3'-dideoxyuridine
  • CS-91 3'-azido-2',3'-dideoxycytidine
  • CS-92 3'-azido-5-methyl-2',3'-dideoxycytidine
  • FDT 3'-fluoro-3'-deoxythymidine
  • these nucleosides are known to inhibit HIV reverse transcriptase as well as cause chain-termination of the growing viral DNA chain.
  • AZT has been approved by the U.S. Food and Drug Administration for administration to patients with AIDS and AIDS-related complex.
  • Several of the other synthetic nucleoside derivatives are undergoing various stages of clinical trials, including 2',3'- dideoxyuridine, 2'.3'-dideoxyinosine, 2',3'- dideoxycytidine, 3'-deoxy-2',3'-didehydrothymidine, and 2'-fluoro-arabinofuranosyl-2'-3'-dideoxycytidine.
  • nucleoside derivatives play an important role in their biological activity.
  • the C1' position of the ribose in the nucleoside (the carbon bound to the nitrogen of the heterocyclic base, see Figure 1) is a chiral center because the carbon is attached to four different moieties.
  • there is an optically active center at C4' of the nucleoside (the ring carbon bound to the hydroxymethyl group that is phosphorylated in nucleotides).
  • both the base attached to the C1' atom and the hydroxymethyl group attached to the C4' atom are on the same side of the carbohydrate ring.
  • a nucleoside is designated a D-nucleoside if the non-hydrogen substituent attached to the C4'-atom is above the plane of the carbohydrate ring.
  • the nucleoside is designated an L-nucleoside if the non-hydrogen substituent attached to the C4'-atom is below the plane of the carbohydrate ring.
  • nucleosides in which the Cl' or C4' substituents are on opposite sides of the carbohydrate plane are rarely biologically active, and are typically toxic.
  • the C3'-exo and C3'-endo conformations place the C5' atom in axial and equatorial positions, respectively.
  • the position of the C5' atom affects the location of the 5'-hydroxyl group in relation to the base. Since the 5'-hydroxyl group is the site of phosphorylation of the nucleoside, its location with respect to the rest of the nucleoside is important.
  • nucleosides have been shown to be potent antiviral agents.
  • BCH-189 (a 1,3-oxathiolane nucleoside) and dioxolane-T are particularly interesting in that the 3'-CH 2 groups of the ribose moieties of these nucleosides are replaced by sulfur and oxygen atoms, respectively, as shown in Figure 1.
  • nucleoside is also less toxic than the racemic
  • Belleau et al., in the Fifth International Conf. on AIDS, Montreal, Canada June 4-9, 1990, paper No. T.C.O.I., reported a method of synthesis of cytidine nucleosides that contain oxygen or sulfur in the 3'-position.
  • the dioxolane ring was prepared by the condensation of RCO 2 CH 2 CHO with glycerine.
  • the Belleau synthesis results in a racemic mixture about the C4'-carbon of the
  • ( ⁇ )-BCH-189 is currently undergoing preclinical toxicology.
  • nucleoside derivatives and to provide new anti-HIV agents.
  • Lewis acid or trimethylsilyl triflate in an organic solvent such as dichloroethane, acetonitrile, or methylene chloride, to provide the stereochemically pure ⁇ -L-(-)-1,3-oxathiolane-nucleoside.
  • Products made according to this process can be used as a research tool to study the inhibition of HIV in vitro or can be administered in a pharmaceutical composition to inhibit the growth of HIV in vivo.
  • Figure 1 is an illustration of a 1,3-oxathiolane nucleoside with the C1' and C4' chiral carbon atoms indicated by asterisk.
  • Figure 2 is an illustration of the ⁇ -D-(+) and ⁇ -L-(-) isomers of 1-[(2 ⁇ ,4 ⁇ )-2-(hydroxymethyl)-4- (1,3-oxathiolane)]cytosine (BCH-189).
  • Figure 3 is an illustration of the process for the preparation of 1,6-dideoxy-1,6-thioanhydro-L-gulose.
  • Figure 4 is an illustration of the process for the preparation of ⁇ -L-(-)-1-[(2 ⁇ ,4 ⁇ )-2-(hydroxymethyl)- 4-(1,3-oxathiolane)]cytosine.
  • protected refers to a moiety that has been placed on a functional group of a molecule to prevent further reaction of the moiety during derivatization of another portion of the molecule.
  • Protecting groups particularly for oxygen and nitrogen, are well known to those skilled in the art of organic chemistry.
  • 1,3-oxathiolane nucleoside refers to a nucleoside derivative as depicted in Figures 1 and 2, wherein a 1,3-oxathiolane is attached to a heterocyclic base, typically a purine or pyrimidine base, through the oxathiolane C5 carbon (that becomes the C1'-carbon in the nucleoside).
  • a heterocyclic base typically a purine or pyrimidine base
  • nucleosides proceeds in two stages.
  • a 1,3-oxathiolane derivative is prepared that includes a hydroxymethyl group in the chiral 2- position (that will become the hydroxymethyl group in the C4' position of the nucleoside) with the proper stereochemistry for the final enantiomerically pure ⁇ -L-(-)-nucleoside.
  • the 1,3-oxathiolane is condensed with a heterocyclic base at the C5 position to produce a 1,3-oxathiolane
  • nucleoside that has both the C1' (heterocyclic base) and the C4' (hydroxymethyl) substituents in the desired position.
  • the starting material for this process for the preparation of enantiomerically pure ⁇ -L-(-)-1,3-oxathiolane nucleosides is 1,6-thioanhydro-L-gulose ( Figure 3, compound 9), that has the appropriate chiral center at C2 for the preparation of the desired ⁇ -L-(-)-(1,3)-oxathiolane nucleosides.
  • 1,6-Thioanhydro-L-gulose can be prepared from L-gulose ( Figure 3, compound 6) in 3 steps ( Figure 3).
  • L-Gulose can be prepared from L-gulonolactone, that in turn can be prepared from D-glucurono-6,3-lactone that is readily available and inexpensive.
  • the hydroxyl groups in gulose are protected. Taking advantage of the principle that reactivity in tosylation, and in esterification generally, decreases in the order primary alcohol > secondary alcohol > tertiary alcohol, the primary hydroxyl group at C 6 is initially selectively
  • the temperature used for this initial protecting step should be the lowest that allows for C 6 esterification without reaction of the other four hydroxyl groups in the molecule, preferably between 18 and 20 degrees C.
  • Tosylation can be performed with p- toluenesulfonyl chloride and pyridine, or under other conditions known to those in the art.
  • the other four hydroxyl groups are protected, preferably with an acetyl moiety, to provide 1,2,3,4-tetra-O-(protected)-6-O- (protected)-L-gulopyranoside 2.
  • Other suitable oxygen protecting groups are known to those skilled in the art, and include benzoate. This reaction should be performed at the lowest temperature under which reaction occurs, preferably between 18 and 20 degrees C.
  • the 1-position of 1,2,3,4-tetra-O-(protected)-L-gulopyrannoside 2 is converted to 2,3,4-tri-O- (protected)-1-halo-6-O-(protected) - ⁇ -L-gulopyranoside 3. by reaction with HX, wherein X is bromo or chloro.
  • the reaction is performed in acetic acid at a temperature range of between 0 and 25 degrees C, for a time period of between six and eight hours.
  • the gulopyranoside 8. is easily converted to 2,3,4-tri-O-(protected)-1,6-dideoxy-1,6-thioanhydro-L-gulose by reaction with potassium O-ethyl xanthate, which can be purchased commercially from Aldrich Chemical Company, or prepared from KOH and carbon disulfide in ethanol. Alternatively, NaSH or (Na) 2 S can be used. The reaction is easily carried out in refluxing acetone. Typically, between 3.0 and 3.5 equivalents of xanthate reagent are used.
  • 2,3,4-tri-O-(protected)-1,6-dideoxy-1,6-thioanhydro-L-gulose is then deprotected under basic conditions at ambient temperature to provide l,6-thioanhydro-L-gulose 9.
  • Any base is suitable in this deprotection step, including ammonium hydroxide, sodium hydroxide, potassium hydroxide, and sodium methoxide. It is preferred that the pH be maintained at less than 9.
  • 1,6-thioanhydro-L-gulose 9 is easily converted to a 1,3-oxathiolane derivative via direct cleavage of the unprotected thioanhydro-L-gulose followed by reduction to the corresponding diol, isopropylidenation of the diol, silylation of the 2-hydroxymethyl group, and
  • 1,6- thioanhydro-L-gulose 9. is initially oxidized with NaIO 4 or other oxidizing agent, including KIO 4 or
  • Pb(OAc) 4 at low temperature (usually 0 to -20°C, and typically approximately -10°C), in a suitable solvent such as methanol/water, to cleave the 2,3-cis diol.
  • the resulting dialdehyde is then reduced with NaBIfy or any borohydride to provide the corresponding vicinal diol.
  • the diol is then protected, preferably with an isopropylidene group, using, for example, CH 3 C(OCH 3 ) 2 CH 3 and p-toluenesulfonic acid at room temperature.
  • the reaction can also be performed with acetone and p- toluenesulfonic acid, optionally with cupric sulfate at room temperature.
  • the hydroxymethyl group of the isopropylidene derivative 10. is then protected using methods known to those skilled in the art, typically with t-butyldiphenylsilyl chloride in DMF at room temperature, and then the diol is deprotected to form compound 11.
  • Other protecting groups known to those skilled in the art can also be used.
  • compound 9 1,6-dideoxy-1,6-thioanhydro-L-gulose can be converted to compound 18.
  • (2R,5S)-5-formyl-2-hydroxymethyl-5-1-3-oxathiolane by: (1) oxidationwith NaIO 4 at low temperature (typically dropwise addition of NaIO 4 at -10°C over 20 minutes, with additional stirring for ten minutes) followed by (2) reduction with NaBH 4 or any borohydride under similar conditions as used for 10. to provide the corresponding diol, which, without isolation, is (3) further treated with NaIO 4 .
  • the primary hydroxyl group of the aldehyde 18 is protected with a benzoyl or silyl group to give 19, which on treatment with pyridinium dichromate to afford the common intermediate 12, (2R,5S)-2- (protected-oxymethyl)-1,3-oxathiolane-5-carboxylic acid.
  • the cis-hydroxyl groups of 9 are selectively protected, preferably with an
  • isopropylidene group to provide 2,3-O-(diprotected)-1,6-thioanhydro-L-gulose 20.
  • the isopropylidene derivative can be prepared with dimethoxypropane and p-toluenesulfonic acid.
  • the 2,3-O-(diprotected)-1,6-thioanhydro-L-gulose 20 without isolation is then protected at the 4-position (see Figure 5).
  • protecting group is benzoyl, however, other protecting groups known to those skilled in the art can also be used.
  • protecting group on the 2 and 3 hydroxyl groups is then removed with catalytic amounts of an acid such as sulfuric acid, hydrochloric acid, formic acid, trifluoroacetic acid, or sulfamic acid in 60% aqueous dioxane or other suitable solvent typically at a temperature range of approximately 0 to 75°C to give 4-O-benzoyl-1,6-thioanhydro-L-gulose 22 in high yield as a solid.
  • the cis diol of 22 is oxidatively cleaved to the dialdehyde 23 using lead tetraacetate in ethyl acetate.
  • the dialdehyde 23 is reduced using sodium borohydride to give 24 which is protected at the2-hydroxymethyl by a t-butyldiphenylsilyl group to give 25 Treatment of 25 with ammonium hydroxide affords 11.
  • Compound 12 is used in a modified Hunsdiecker reaction (Dhavale, D.; et al., Tetrahedron Lett..
  • trifluoromethanesulfonate or a Lewis acid in a dry organic solvent to provide a mixture of 1'- ⁇ and 1'- ⁇ nucleosides that can be separated chromatographically or by other methods known to those in the art.
  • the choice of catalyst for condensation may affect the final product ratio of ⁇ to ⁇ nucleoside product.
  • Purine bases include adenine, hypoxanthine, guanine, N 6 -alkylpurines, N 6 -benzylpurine, 6-halopurine, 2,6-dihalopurine, N 6 -vinylpurine, N 6 -acetylenic purine, N 6 -acyl purine, 6-hydroxyalkyl purine, and 6-thioalkyl purine.
  • Pyrimidine bases include thymine, cytosine,
  • Protecting groups are well known to those skilled in the art, and include trimethylsilyl, dimethylhexylsilyl, and t-butyldiphenylsilyl, tritylmethyl, alkyl groups, acyl groups such as acetyl and propionyl, methylsulfonyl, and p-toluylsulfonyl.
  • Friedel-Crafts catalysts that can be used in the condensation reaction include SnCl 4 , ZnCl 4 , TiCl 4 , AICI 3 , FeCl 3 , BF 3 -diethylether, and BCI 3 . These catalysts require anhydrous conditions because the presence of water reduces their activity.
  • catalysts are also inactivated in the presence of organic solvents with active hydrogens, such as alcohols and organic acids.
  • active hydrogens such as alcohols and organic acids.
  • solvents such as carbon disulfide, methylene chloride, nitromethane, 1,2-dichloroethane, nitrobenzene, tetrachloroethane, chlorobenzene, benzene, toluene, dimethylformamide, tetrahydrofuran, dioxane, or acetonitrile.
  • Anhydrous aluminum chloride is not soluble in carbon disulfide.
  • Niedballa et al., J. Org. Chem. 39, 25 (1974).
  • the preferred catalyst in SnCl 4 Useful solvents are 1,2-dichloroethane and methylene chloride.
  • Trimethylsilyl triflate can be used under the same conditions described above for the Friedel-Crafts catalysts. The reaction proceeds at a temperature range of from -10°C to 200°C.
  • the 5'-O-position of the nucleoside is deprotected. Desilylation can be carried out with a variety of reagents, including acetic acid,
  • the flask was fitted with a CaCl 2 tube and stirred in the ice bath for 30 min. and then at room temperature for 15 h.
  • the solvent was removed under reduced pressure and the residue partitioned between ethyl ether and cold water.
  • the organic layer was washed twice with cold water and twice with cold sat. aq NaHC0 3 solution, dried (MgSO 4 ), filtered and

Abstract

Procédé asymétrique pour la préparation de nucléosides de β-L-(-)-1,3-oxathiolane énantiomériquement purs, consistant à préparer initialement les intermédiaires chiraux-clés (2R,5R) et (2R,5S)-5-(à protection O)-2-oxyméthyle protégé)-1,3-oxathiolane à partir de 1,6-thioanhydro-L-gulose. Le 2R,5(R,S)-5-(à protection O)-2-(oxyméthyle protégé)-1,3-oxathiolane est condensé avec une base hétérocyclique désirée, en général une base purine ou pyrimidine, pour donner le produit nucléoside. La synthèse peut être utilisée pour préparer le composé pharmaceutiquement important β-L-(-)-1-[(2β,4β)-2-(hydroxyméthyle)-4-(1,3-thioxolane)]cytosine (β-L-(-)BCH-189).
PCT/US1991/009123 1990-12-05 1991-12-05 NUCLEOSIDES DE β-L-(-)-1,3-OXATHIOLANE ENANTIOMERIQUEMENT PURS WO1992010496A1 (fr)

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US07/622,762 US5179104A (en) 1990-12-05 1990-12-05 Process for the preparation of enantiomerically pure β-D-(-)-dioxolane-nucleosides
US622,762 1990-12-05
US69919791A 1991-05-13 1991-05-13
US699,197 1991-05-13

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WO1994029301A1 (fr) * 1993-06-07 1994-12-22 Biochem Pharma Inc. Synthese stereoselective d'analogues de nucleosides au moyen d'un intermediaire bicyclique
US5444063A (en) * 1990-12-05 1995-08-22 Emory University Enantiomerically pure β-D-dioxolane nucleosides with selective anti-Hepatitis B virus activity
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US6703396B1 (en) 1990-02-01 2004-03-09 Emory University Method of resolution and antiviral activity of 1,3-oxathiolane nuclesoside enantiomers
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