TWI382849B - Method of producing cosmetic product for skin care in ways of gene silencing effect and genetic recombinant nucleic acids encoding gene silencing effector - Google Patents

Method of producing cosmetic product for skin care in ways of gene silencing effect and genetic recombinant nucleic acids encoding gene silencing effector Download PDF

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TWI382849B
TWI382849B TW97140901A TW97140901A TWI382849B TW I382849 B TWI382849 B TW I382849B TW 97140901 A TW97140901 A TW 97140901A TW 97140901 A TW97140901 A TW 97140901A TW I382849 B TWI382849 B TW I382849B
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gene silencing
nucleotide
sequence
cosmetic
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TW200924797A (en
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Shi Lung Lin
David Ts Wu
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Mello Biotech Taiwan Co Ltd
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產生藉由基因靜默效應以用於皮膚維護之化妝品的方法以及編碼基因 靜默效應物之基因重組核苷酸 Method for producing a cosmetic for skin maintenance by gene silencing effect and coding gene Recombinant nucleotide

本發明係關於一種產生用於皮膚維護之化妝品方法。更具體來說,本發明係關於一種方法及成分,該方法用來產生一非天然產生之內含子,而其成分於皮膚細胞能經由分解而成小夾核醣核酸(small hairpin RNA,shRNA)或是微核醣核酸(microRNA,miRNA)對於細胞之特定基因誘發基因靜默效果,特別是對於皮膚色素相關基因以及皮膚老化基因。該基因靜默效果不只對膚色美白有效,對於皮膚細胞抑制老化基因也具有成效。 The present invention is directed to a cosmetic method for producing skin care. More specifically, the present invention relates to a method and composition for producing a non-naturally occurring intron, the component of which is capable of decomposing into small hairpin RNA (shRNA) in skin cells. Or microRNAs (miRNAs) induce gene silencing effects on specific genes of cells, especially for skin pigment-related genes and skin aging genes. The gene silencing effect is not only effective for skin whitening, but also for skin cells to inhibit aging genes.

預防色素累積(係如曬傷)與皮膚老化是擁有健康皮膚之主要方法。然而許多皮膚色素累積與老化過程係與個人基因活性相關。例如,酪胺酸酶(tyrosinase)是於黑色素細胞膜上之一種醣蛋白,酪胺酸酶在皮膚與毛髮上對於黑色素生成過程係一速率決定酵素。此外,透明質酸(hyaluronan,HA)係於皮膚細胞主要抗老化之細胞間質,透明質酸酶(hyaluronidase,Hyal)經由分解皮下透明質酸而造成皮膚皺紋。是故,藉由抑制這些酵素基因活性而能使皮膚年輕健康。 Preventing pigmentation (such as sunburn) and skin aging is the main method of having healthy skin. However, many skin pigment accumulation and aging processes are associated with individual gene activity. For example, tyrosinase is a glycoprotein on the membrane of melanocytes, which is a rate-determining enzyme for the melanin production process on the skin and hair. In addition, hyaluronan (HA) is a major anti-aging intercellular substance in skin cells, and hyaluronidase (Hyal) causes skin wrinkles by decomposing subcutaneous hyaluronic acid. Therefore, the skin can be young and healthy by inhibiting the activity of these enzyme genes.

目前,無任何與透明質酸酶抑制劑相關之先前技術用於去除皺紋。許多用於皮膚美白的先前技術係藉使用荷爾蒙衍生之抑制性胜肽、小分子化合物及植物萃取物來抑制酪胺酸酶活 性,其中植物萃取物包含寡胜肽(Pinel U.S.Pat.No.7,268,108,以及Schonrock U.S.Pat.No.6,852,699)、hydroxytetronic acid衍生物(Perricone U.S.Pat.No.7,019,029)、含苯化合物(Kim U.S.Pat.No.6,838,481)、含苯二酚(hydroquinone)物(Wortzman U.S.Pat.No.6,998,130 and 7,025,977)、二元醇與三元醇之類似物(Brown U.S.Pat.No.7,250,157)、麴酸衍生物(Ancira U.S.Pat.No.6,710,076)、子囊菌衍生酵素(Mammone U.S.Pat.No.6,514,506)及植物萃取物(Nagamine U.S.Pat.No.7,192,617;Lee U.S.Pat.No.7,125,572;Steck U.S.Pat.No.6,521,267;Pauly U.S.Pat.No.7,105,184;Leverett U.S.Pat.No.6,994,874, 7,060,304,and 7,247,321;Arquette U.S.Pat.No.7,025,957, 7,029,709,and 7,097,866;Chaudhuri U.S.Pat.No.6,649,150 and 6,969,509)。雖然這些物質及方法可能在體外有功效,但是他們之中只有少數能在臨床試驗引起淡化色素之效果(Solano等人(2006),pigment cell Res.19:550-571)。然而,所有苯二酚衍生物衍生之苯醌(quinone)推定係具有細胞毒性。因此,在體內以及體外試驗之間的鴻溝暗示著需要更具創新之方法來證實這些化合物的安全性及有效性。 Currently, there are no prior art techniques associated with hyaluronidase inhibitors for removing wrinkles. Many prior art techniques for skin whitening use hormonally derived inhibitory peptides, small molecule compounds, and plant extracts to inhibit tyrosinase activity. Sex, wherein the plant extract comprises oligopeptide (Pinel US Pat. No. 7,268,108, and Schonrock US Pat. No. 6,852,699), hydroxytetronic acid derivative (Perricone US Pat. No. 7,019,029), benzene-containing compound (Kim USPat) .No. 6,838,481), hydroquinone (Wortzman USPat. No. 6,998,130 and 7,025,977), analogs of diols and triols (Brown USPat. No. 7,250,157), decanoic acid derivatives (Ancira US Pat. No. 6, 710, 076), Ascomycete-derived enzyme (Mammone US Pat. No. 6, 514, 506) and plant extracts (Nagamine US Pat. No. 7, 192, 617; Lee US Pat. No. 7, 125, 572; Steck US Pat. No. 6,521,267; Pauly USPat. No. 7,105,184; Leverett USPat. No. 6,994,874, 7,060,304, and 7,247,321; Arquette USPat. No. 7,025,957, 7,029,709, and 7,097,866; Chaudhuri USPat. No. 6,649,150 and 6,969,509). Although these substances and methods may be effective in vitro, only a few of them can cause the effects of lightening pigments in clinical trials (Solano et al. (2006), Pigment Cell Res. 19: 550-571). However, all quinone derivatives derived from benzenediol derivatives are cytotoxic. Therefore, the gap between in vivo and in vitro trials suggests the need for more innovative ways to demonstrate the safety and efficacy of these compounds.

近來,核醣核酸干擾技術(RNAi technology)進步,新穎核醣核酸試劑已經被揭露能對特定基因具有抑制之潛在效果,其中該試劑包含使用短的雙股核醣核酸/小干擾核醣核酸 (siRNA)(如dsRNA/siRNA)(Fire等人(1998)Nature 391:806-811;Elbashir等人(2001)Nature 411:494-498)以及去氧核醣核酸化之核醣核酸干擾分子(如D-RNAi)(Lin等人(2001)Biochem.Biophys.Res.Commun.281:639-644)。因此,或許這些核醣核酸試劑能被用來發展用於皮膚之新穎化妝品設計與產品。理論上來說,核醣核酸干擾(RNAi)機制引發一後轉錄基因靜默(PTGS),該後轉錄基因靜默能於奈米等級劑量下抑制特定基因,同時該核醣核酸干擾機制被證實具有持續性效果,且比傳統上使用反意寡核苷酸(antisense oligonucleotides)或小分子抑制物基因剔除方法毒性要小(Lin等人(2001)Current Cancer Drug Targets 1:241-247)。隨著許多論文發表(Grant,S.R.(1999)Cell 96:303-306;Elbashir等人(2001)supra;Lin等人,(2001)supra;Lin等人(2004a)Drug Design Reviews 1:247-255),小干擾核醣核酸(siRNA)引發基因靜默可持續超過一周,然而去氧核醣核酸化之核醣核酸干擾分子(deoxyribonucleotidylated-RNA interfering molecules,D-RNAi)的效果能持續到一個月之久。該siRNA/D-RNAi引發一系列細胞內特定序列之訊息核醣核酸(mRNA)分解與其轉譯抑制過程,然而siRNA/D-RNAi也可能影響序列相似之全部轉錄基因,此現象稱之為共同抑制(co-suppression)。例如,外來基因或病毒基因之核苷酸會被RNaseIII核酸內切酶(RNaseIII endoribonucleases,Dicer)與RNA-directed RNA聚合酶 (RNA-directed RNA polymerases,RdRp)處理後產生之小的核醣核酸片段進而產生共同抑制。基於已經建構好的核醣核酸干擾機制,先前技術著重藉由合成之siRNA及雙股核醣核酸技術用於抑制酪胺酸酶活性(Binetti US Pat.Application Publication No.20050137151 and Collin-Djangone US Pat.Application Publication No.20070134188) Recently, advances in RNAi technology, novel ribonucleic acid reagents have been revealed to have the potential to inhibit specific genes, including the use of short double-stranded ribonucleic acid/small interfering ribonucleic acid (siRNA) (eg dsRNA/siRNA) (Fire et al. (1998) Nature 391: 806-811; Elbashir et al. (2001) Nature 411: 494-498) and deoxyribonucleated ribonucleic acid interference molecules (eg D-RNAi) (Lin Et al. (2001) Biochem. Biophys. Res. Commun. 281:639-644). Therefore, perhaps these ribonucleic acid reagents can be used to develop novel cosmetic designs and products for the skin. In theory, the RNA interference (RNAi) mechanism triggers a post-transcriptional gene silencing (PTGS), in which the transcript gene silences the specific gene at a nanoscale dose, and the ribonucleic acid interference mechanism is confirmed to have a sustained effect. And it is less toxic than traditionally using antisense oligonucleotides or small molecule inhibitor gene knockout methods (Lin et al. (2001) Current Cancer Drug Targets 1 : 241-247). With many papers published (Grant, SR (1999) Cell 96 : 303-306; Elbashir et al. (2001) supra ; Lin et al., (2001) supra ; Lin et al. (2004a) Drug Design Reviews 1 : 247-255 ), small interfering ribonucleic acid (siRNA)-induced gene silencing can last for more than a week, but the effects of deoxyribonucleotide-RNA interfering molecules (D-RNAi) can last for a month. The siRNA/D-RNAi triggers a series of intracellular specific sequence information ribonucleic acid (mRNA) decomposition and its translational inhibition process, however siRNA/D-RNAi may also affect all transcripts with similar sequences, a phenomenon known as co-suppression ( Co-suppression). For example, a nucleotide of a foreign gene or a viral gene is a small ribonucleic acid fragment produced by treatment with RNase III endoribonucleases (Dicer) and RNA-directed RNA polymerases (RdRp). Produce a common inhibition. Based on the established ribonucleic acid interference mechanism, the prior art has focused on the inhibition of tyrosinase activity by synthetic siRNA and double-stranded ribonucleic acid technology (Binetti US Pat. Application Publication No. 20050137151 and Collin-Djangone US Pat. Application) Publication No.20070134188)

雖然核醣核酸干擾技術能做為於皮膚抑制特定基因活性,但其應用尚未於高等脊椎動物證實其穩定及安全性,尤其於魚、鳥、哺乳動物以及人體上仍未證實。例如,幾乎所有於脊椎動物上藉由雙股核醣核酸形式之siRNA試劑都顯示出類似干擾素引起之非特定核醣核酸分解(Stark等人(1998)Annu.Rev.Biochem. 67:227-264;Elbashir等人supra;U.S.Pat.No.4,289,850 to Robinson;Lau U.S.Pat.No.6,159,714)。此類似干擾素引起之細胞毒性反應降低了特定基因基因靜默效果並於脊椎動物細胞中使非特定核醣核酸分解。特別是在哺乳細胞,當siRNA/雙股核醣核酸的尺寸大於25鹼基對(base-pairs)核醣核酸干擾效果將使非特定核醣核酸分解。而小於25鹼基對之siRNA或shRNA之轉染可能也無法克服上述問題,因Sledz等人與Lin等人已經證實高劑量之siRNA及shRNA(>250 nM in human T cells)能造成類似大於25鹼基對之雙股核醣核酸所產生的嚴重細胞毒性。此毒性是由雙股核醣核酸結構藉由活化類似干擾素引起之非特定核醣核酸分解以及細胞凋亡所導 致,此細胞凋亡過程是經由細胞中PKR與2-5A系統路徑。干擾素所誘發之蛋白激酶PKR(protein kinase PKR)能激發細胞凋亡是眾所皆知,其中干擾素所引發2’,5’-oligoadenylate合成酶(2-5A系統)之活化將造成廣泛性單股核醣核酸之裂解,而PKR與2-5A系統兩者皆具有雙股核醣核酸接合端(motif)。除了這個問題之外,最困難的問題在於傳送這些不穩定之siRNA/shRNA進入體內,因為核醣核酸酶(RNase)之活性在脊椎動物中很高(Brantl S.(2002)Biochimica et Biophysica Acta 1575,15-25)。 Although ribonucleic acid interference technology can inhibit specific gene activity in the skin, its application has not been confirmed to be stable and safe in higher vertebrates, especially in fish, birds, mammals and humans. For example, almost all vertebrate siRNA agents in the form of double-stranded ribonuclease exhibit non-specific ribonuclease-like decomposition by interferon (Stark et al. (1998) Annu. Rev. Biochem. 67 :227-264; Elbashir et al. supra ; US Pat. No. 4, 289, 850 to Robinson; Lau US Pat. No. 6, 159, 714). This cytotoxic response caused by interferon reduces the silencing effect of specific gene genes and decomposes non-specific ribonucleic acids in vertebrate cells. Particularly in mammalian cells, when the size of the siRNA/double-stranded ribonucleic acid is greater than 25 base-pairs, the ribonucleic acid interference effect will decompose the non-specific ribonucleic acid. Transfection of siRNA or shRNA less than 25 base pairs may not overcome the above problems, as Sledz et al. and Lin et al. have demonstrated that high doses of siRNA and shRNA (>250 nM in human T cells) can cause a similarity greater than 25 Severe cytotoxicity by base pair double-stranded ribonucleic acid. This toxicity is caused by the double-stranded ribonucleic acid structure by activation of non-specific ribonuclease-like breakdown and apoptosis caused by interferon-like processes via the PKR and 2-5A system pathways in the cell. It is well known that interferon-induced protein kinase PKR stimulates apoptosis, and activation of 2',5'-oligoadenylate synthase (2-5A system) triggered by interferon will cause widespread The cleavage of a single ribonucleic acid, while both the PKR and 2-5A systems have a double-stranded ribonucleic acid junction. In addition to this problem, the most difficult problem is the transmission of these unstable siRNA/shRNAs into the body, as the activity of RNase is high in vertebrates (Brantl S. (2002) Biochimica et Biophysica Acta 1575 , 15-25).

由於核醣核酸干擾是起因於由外來基因或病毒基因之轉錄核苷酸所衍生之小核醣核酸產物(21-25核苷酸鹼基),因此Pol-III-mediated siRNA/shRNA表現載體(Pol-III-mediated siRNA/shRNA expression vector)能提供於體內相對穩定核醣核酸靜默效果(Tuschl等人(2002)Nat Biotechnol. 20:446-448)。雖然先前技術(Miyagishi等人(2002)Nat Biotechnol 20:497-500;Lee等人(2002)Nat Biotechnol 20:500-505;Paul等人(2002)Nat Biotechnol 20:505-508)試圖使用以載體方式之siRNA方法已經成功維持穩定之基因靜默效果,然而他們的策略卻失去聚焦核醣核酸靜默效果於特定細胞型態或組織上,因為使用的是第三型核醣核酸聚合酶啟動子(Pol-III promoter)。第三型核醣核酸聚合酶啟動子例如U6以及H1係於幾乎全部種類之細胞中皆會被活化而使組織特定靜默基因不可能發 生。再者,因為第三型核醣核酸轉錄經常於小段去氧核醣核酸發生錯誤而不進行正常的轉錄中止,進而產生大於25鹼基對之核醣核酸,該較長之核醣核酸會產生不預期之類似干擾素細胞毒性(Gunnery等人(1999)J Mol Biol.286:745 757;Schramm等人(2002)Genes Dev 16:2593-2620)。此外,於第三型核醣核酸聚合酶啟動子與其他載體啟動子(例如LTR與CMV啟動子)之競爭性衝突也會產生問題。另外第三型核醣核酸聚合酶導引之核醣核酸干擾基因靜默系統(Pol-III-directed RNAi system)會產生高濃度之siRNA/shRNA進而使細胞中本身microRNA(miRNA)路徑過飽和,因而產生廣泛性之miRNA抑制以及細胞死亡(Grimm等人(2006)Nature 441:537-541)。這些缺點造成使用第三型核醣核酸聚合酶導引之核醣核酸干擾系統於皮膚保養用途方面產生阻礙。簡言之,為了改善核醣核酸干擾技術於傳送系統之穩定性、指標專一性、安全性,因此使用新穎核醣核酸干擾機制於一有效率、穩定、安全之基因工程方法與成分並用於抑制特定基因仍待滿足其需求。 Since the ribonucleic acid interference is caused by a small ribonucleic acid product (21-25 nucleotide base) derived from a transcription nucleotide of a foreign gene or a viral gene, the Pol-III-mediated siRNA/shRNA expression vector (Pol- III-mediated siRNA/shRNA expression vector) provides a relatively stable ribonucleic acid silencing effect in vivo (Tuschl et al. (2002) Nat Biotechnol. 20 :446-448). Although the prior art (Miyagishi et al. (2002) Nat Biotechnol 20 : 497-500; Lee et al. (2002) Nat Biotechnol 20 : 500-505; Paul et al. (2002) Nat Biotechnol 20 : 505-508) The siRNA approach has successfully maintained a stable gene silencing effect, whereas their strategy has lost the focus of ribonucleic acid silencing on specific cell types or tissues because of the use of a third-type ribonucleic acid polymerase promoter (Pol-III). Promoter). Type III ribonuclease polymerase promoters such as U6 and H1 are activated in almost all cell types such that tissue-specific silence genes are unlikely to occur. Furthermore, because the third type of ribonucleic acid transcription often occurs in a small segment of DNA without a normal transcriptional stop, resulting in a ribonucleic acid greater than 25 base pairs, the longer ribonucleic acid will produce an unexpected similarity. Interferon cytotoxicity (Gunnery et al. (1999) J Mol Biol . 286 : 745 757; Schramm et al. (2002) Genes Dev 16 : 2593-2620). Furthermore, competitive conflicts with the third type ribonucleic acid polymerase promoter and other vector promoters (e.g., LTR and CMV promoters) can also cause problems. In addition, the third type of ribonucleic acid polymerase-guided ribo-interceptor RNAi system produces high concentrations of siRNA/shRNA, which in turn oversaturates the microRNA (miRNA) pathway in the cell, thus producing a wide range. miRNA inhibition and cell death (Grimm et al. (2006) Nature 441 : 537-541). These shortcomings cause the use of a third-type ribonucleic acid polymerase-directed ribonucleic acid interference system to create an obstacle to skin care applications. In short, in order to improve the stability, specificity and safety of the ribonucleic acid interference technology in the delivery system, a novel ribonucleic acid interference mechanism is used to efficiently, stably and safely use genetic engineering methods and components and to inhibit specific genes. Still waiting for its needs.

根據基因轉錄的研究(例如訊息核醣核酸(mRNA))關於具有蛋白轉譯功能之外顯子(exon)組成係充分於文獻中介紹,此時不具有蛋白轉譯功能之內含子(intron)則會被分解(Nott等人 (2003)RNA 9:607-617)。然而,內含子真的是遺傳廢物而無任何功能嗎?最近這項誤解經由觀察到內含子之微核醣核酸(intronic microRNA)而被修正(Lin等人(2003)Biochem Biophys Res Commun.310:754-760;Ying等人(2004)Gene 342:25-28;Ying等人(2005)Biochem Biophys Res Commun.326:515-520)。內含子的微核醣核酸intronic microRNA(簡稱intronic miRNA)係一群由內含子所衍生之小單股核醣核酸,其中內含子會進一步被分解成小夾微核醣核酸,通常miRNA大小在18到27的核苷酸之間,並能直接降解它所互補之特定基因之訊息核醣核酸或抑制它所互補之特定基因之蛋白質轉譯。由此看來,intronic miRNA與前述siRNA/shRNA類似,但差別在於siRNA/shRNA不需要第二型核醣核酸聚合酶對他們進行處理。此外,因為內含子通常包含許多轉譯停止子用於無義介導降解(nonsense-mediated dacay(NMD))系統來辨認而使大部分核醣核酸被快速降解而避免累積於細胞中進而產生毒性(Zhang et al.(1994)Nature 372:809-812;Lewis et al.(2003)Proc.Natl.Acad.Sci.USA 100:189-192)。根據估計大約10%到30%之剪接之內含子於NMD系統處理後係被保留並運輸至細胞質中以停留至其分解,因此暗示細胞本身係具有原始intronic miRNA(Clement et al.(1999)RNA 5:206-220)。 According to the study of gene transcription (such as the message ribonucleic acid (mRNA)), the exon composition with protein translation function is fully described in the literature, and the intron without protein translation function will be Decomposed (Nott et al. (2003) RNA 9 : 607-617). However, is the intron really a genetic waste without any function? This recent misunderstanding has been corrected by the observation of intronic microRNAs (Lin et al. (2003) Biochem Biophys Res Commun . 310 :754-760; Ying et al. (2004) Gene 342 :25- 28; Ying et al. (2005) Biochem Biophys Res Commun . 326 : 515-520). Intronic microRNAs (intronic miRNAs) are a group of small single-stranded ribonucleic acids derived from introns, in which introns are further broken down into small-clip microRNAs, usually with a miRNA size of 18 Between the nucleotides of 27, and directly degrade the message ribonucleic acid of the specific gene it complements or inhibit the protein translation of the specific gene it complements. From this point of view, the intronic miRNA is similar to the aforementioned siRNA/shRNA, but the difference is that the siRNA/shRNA does not require a second type of ribonucleic acid polymerase to process them. In addition, because introns usually contain many translational stopers for nonsense-mediated dacay (NMD) systems to identify most of the ribonucleic acids are rapidly degraded to avoid accumulation in cells and then produce toxicity (Zhang Et al . (1994) Nature 372 : 809-812; Lewis et al . (2003) Proc. Natl. Acad. Sci. USA 100 : 189-192). It is estimated that approximately 10% to 30% of the spliced introns are retained in the NMD system and transported to the cytoplasm to remain to their decomposition, suggesting that the cells themselves have the original intronic miRNA (Clement et al . (1999) RNA 5 : 206-220).

本發明提供一種於人體細胞中用於誘發核醣核酸(RNA)剪接(splicing)與作用(processing)相關性之基因靜默效應之方 法,包含以下步驟:步驟a.為建構一基因重組核苷酸(recombinant nucleotide),其中基因重組核苷酸包含至少一具有基因靜默效應物(gene silencing effector)之內含子之介子(intronic insert)之內含子(intron),基因靜默效應物係被外顯子(exon)所連接,而內含子能與外顯子分離而誘發經由核醣核酸之基因靜默效應(RNA-mediated gene silencing),而外顯子連接而能轉譯成蛋白質;步驟b.為將基因重組核苷酸裁接(cloning)進入載體(vector);以及步驟c.轉染載體進入複數株人類細胞中,其中人類細胞產生複數個基因重組核苷酸之前驅核醣核酸(primary RNA),此時人類細胞體內之剪接體(human cells spliceosomes)剪接內含子並使分離於前驅核醣核酸,以至於產生基因靜默效應物以靜默具有與基因靜默效應物序列互補及同源之基因。 The present invention provides a gene silencing effect for inducing ribonucleic acid (RNA) splicing and processing correlation in human cells. The method comprises the steps of: step a. constructing a genetic recombinant nucleotide, wherein the genetic recombinant nucleotide comprises at least one meson having an intron of a gene silencing effector (intronic insert) Intron, the gene silencing effector is linked by an exon, and the intron can be separated from the exon to induce RNA-mediated gene silencing. And the exon is linked to be translated into a protein; step b. is to cloning the recombinant nucleotide into the vector; and step c. transfecting the vector into a plurality of human cells, wherein the human cell Generating a plurality of genetically recombinant nucleotides, a precursor RNA, at which time human cells spliceosomes are spliced to the intron and are separated from the precursor ribonucleic acid such that a gene silencing effector is produced Silence has a gene that is complementary and homologous to the gene silencing effector sequence.

本發明亦提供一種用於誘發核醣核酸剪接之基因靜默之基因重組核苷酸,包含至少一具有一內含子之介子(intronic insert)之內含子(本發明亦稱為SpRNAi),其中該內含子係被外顯子所連接並能被細胞中核醣核酸剪接系統(cellular RNA splicing machinery)處理而分離;以及複數個外顯子(exon),其中外顯子能連接而形成一具有特定功能之基因。 The present invention also provides a genetically modified recombinant nucleotide for inducing ribonucleic acid splicing, comprising at least one intronic insert having an intronic insert (also referred to as SpRNAi in the present invention), wherein Introns are ligated by exons and can be isolated by cellular RNA splicing machinery; and a plurality of exons, wherein exons can be joined to form a specific Functional gene.

如圖1所示,細胞中內含子之微核醣核酸(intronic miRNA)生成過程係依賴第二型轉錄(聚合酶)系統所轉錄之先驅訊息核醣核酸(pre-mRNA)與內含子剪接體(spliceosome)之群聚,此 過程是發生於細胞核中靠近核染質之附近(Lin等人(2004a)supra;Ghosh等人(2000)RNA 6:1325-1334)。在真核細胞中,具有轉譯蛋白功能之基因轉錄分子(例如,訊息核醣核酸mRNA)係被第二型核醣核酸聚合酶(Pol-II)所製造。基因之轉錄產生先驅訊息核醣核酸(pre-mRNA),它具有四大主要部分包含:五端-不轉譯區(域)(5'-untranslated region,UTR)、具有蛋白轉譯能力之外顯子(protein-coding exon)、不具轉譯功能之內含子(non-coding intron)以及三端-不轉譯區(域)(3'-untranslated region),而本發明之基因重組核苷酸包含內含子與外顯子。。一般說來,五端-不轉譯區域以及三端-不轉譯區域可視為類似不具轉譯功能之內含子;其中,不具轉譯功能之內含子占了整個先驅訊息核醣核酸轉錄分子絕大部分序列;其中,每個內含子長度範圍約於30000鹼基對左右,並須要被剪接後才使pre-mRNA變為成熟訊息核醣核酸(mRNA)。此變為成熟mRNA過程稱為核醣核酸之剪接(splicing),其中此過程係藉由剪接體(spliceosome)所執行。於核醣核酸剪接後,一些內含子之核醣核酸片段被進一步處理而成微核醣核酸(miRNA),此miRNA能經由核醣核酸干擾基因靜默效應(機制)個別地、有效地靜默特定基因,在此同時,外顯子是可被接合而形成成熟之訊息核醣核酸以待蛋白質轉譯合成。 As shown in Figure 1, the intronic miRNA production process of introns in cells depends on the precursor message ribonucleic acid (pre-mRNA) and intron splicing transcribed by the second type of transcription (polymerase) system. Clustering of (spliceosome), this process occurs in the vicinity of nuclear stains in the nucleus (Lin et al. (2004a) supra ; Ghosh et al. (2000) RNA 6 : 1325-1334). In eukaryotic cells, a gene transcription molecule having a translational protein function (for example, a message ribonucleic acid mRNA) is produced by a second type ribonucleic acid polymerase (Pol-II). The transcription of the gene produces the precursor message ribonucleic acid (pre-mRNA), which has four major components: the 5'-untranslated region (UTR), and the exon (with the ability to translate the protein) Protein-coding exon), a non-coding intron and a 3'-untranslated region, and the recombinant nucleotide of the present invention comprises an intron With exons. . In general, the five-terminal-untranslated region and the three-terminal-untranslated region can be regarded as introns with no translation function; among them, the intron without translation function accounts for most of the sequence of the entire precursor message ribonucleic acid transcription molecule. Wherein each intron has a length in the range of about 30,000 base pairs and needs to be spliced to turn the pre-mRNA into a mature message ribonucleic acid (mRNA). This becomes a mature mRNA process called splicing of ribonucleic acid, where this process is performed by a splicosome. After ribonuclear splicing, some intron ribonuclease fragments are further processed into microRNAs (miRNAs) that individually and efficiently silence specific genes via ribonucleic acid interference gene silencing effects (mechanisms). At the same time, exons are ligated to form mature message ribonucleic acid for protein translation synthesis.

我們已經證實脊椎動物基因之內含子能有效地產生成熟的miRNA,然而此生成過程係與siRNA以及基因間之微核醣核 酸(intergenic miRNA也就是exonic miRNA)所不同(Lin et al.(2003)supra;Lin et.al.(2005)Gene 356:32-38)。為了證實其不同,圖2顯示了比較原有之生成過程與核醣核酸干擾機制在於siRNA、intergenic miRNA以及intronic miRNA。其中,siRNA係由雙股互補之核醣核酸所形成,此雙股互補之核醣核酸是由同一去氧核醣核酸基板(DNA template)之相反位置啟動子所轉錄而進一步被第三型核醣核酸內切酶(RNaseIII endoribonuclease,岱塞爾(Dicer))處理成20到25個鹼基對大小。不同於siRNA,intergenic miRNA(例如,lin-4及let-7)之生成過程係牽涉於不具轉錄功能之前驅核醣核酸轉錄分子,其中該前驅核醣核酸轉錄分子係由第二型轉錄聚合酶系統或是第三型轉錄聚合酶系統所聚合。然而,內含子之微核醣核酸係被第二型轉錄聚合酶系統所轉錄並釋出而成一能被剪接之內含子。於細胞核中,前驅微核醣核酸係被似多希亞之核醣核酸酶(Drosha-like RNase)(作用後而生成基因間之miRNA)或是無義介導降解(NMD)系統(作用後而生成intronic miRNA)剪接而形成像髮夾似之圓環結構(stem-loop),稱之為先驅微核醣核酸,並運輸至細胞質中作用成為成熟之miRNA。接下來,這三種核醣核酸最後都與核醣核酸誘導靜默複合體(RNA-induced silencing complex,RISC)合併。然而,第三型核醣核酸內切酶與核醣核酸誘導靜默複合體對於siRNA及miRNA所作用之路徑係不同的路徑(Tang,G.(2005)Trends Biochem Sci.30:106-114)。因此,miRNA之效果要比siRNA要來更專一,因為miRNA係只有單股核醣核酸進行作用。換句話說,siRNA主要是催化mRNA降解,而miRNA則能引發特定mRNA之降解,或是抑制特定蛋白之生合成。因為intronic miRNA路徑係被許多細胞內系統所調控,這些細胞內系統包含第二型轉錄聚合酶系統、核醣核酸剪接系統以及NMD系統,因此,intronic miRNA之基因靜默效果被認為於這三種核醣核酸干擾路徑是最有效率、專一、安全之一種(Lin et al.(2008)Frontiers in Bioscience 13:2216-2230)。同時,本發明之基因重組核苷酸之前驅核醣核酸(primary RNA)是由轉錄系統所產生,而轉錄系統自第二型轉錄系統(Pol-II)、第一型轉錄系統(Pol-I)以及病毒轉錄系統選其一。 We have demonstrated that the intron of the vertebrate gene is effective in producing mature miRNAs, however this process differs from siRNA and intergenic miRNAs (exonic miRNAs) (Lin et al . (2003) Supra ; Lin et.al. (2005) Gene 356 : 32-38). To confirm the difference, Figure 2 shows the comparison between the original generation process and the ribonucleic acid interference mechanism in siRNA, intergenic miRNA, and intronic miRNA. Wherein, the siRNA is formed by a double-stranded complementary ribonucleic acid which is transcribed by a promoter at the opposite position of the same DNA template and further digested by a third type of ribonucleic acid. The enzyme (RNase III endoribonuclease, Dicer) is processed to a size of 20 to 25 base pairs. Unlike siRNA, the generation process of intergenic miRNAs (eg, lin-4 and let-7) is involved in a transcriptional molecule that does not have a transcriptional function, such as a second-type transcriptional polymerase system or It is a third type of transcriptase polymerase system. However, the intron microRNA is transcribed and released by a second type of transcriptional polymerase system to form a spliced intron. In the nucleus, the precursor microRNA is mediated by a Drosha- like RNase (which acts to generate an intergenic miRNA) or a nonsense-mediated degradation (NMD) system. The miRNA is spliced to form a stem-loop like a hairpin, called a precursor microRNA, and transported to the cytoplasm to act as a mature miRNA. Next, all three ribonucleic acids were finally combined with an RNA-induced silencing complex (RISC). However, the third type endoribonuclease and ribonucleic acid induce a pathway in which the silent complex acts on siRNA and miRNA (Tang, G. (2005) Trends Biochem Sci . 30 : 106-114). Therefore, the effect of miRNA is more specific than that of siRNA, because miRNA is only a single-stranded ribonucleic acid. In other words, siRNA mainly catalyzes the degradation of mRNA, while miRNA can trigger the degradation of specific mRNA or inhibit the synthesis of specific proteins. Because the intronic miRNA pathway is regulated by many intracellular systems that contain the second-type transcriptional polymerase system, the ribonucleic splicing system, and the NMD system, the gene silencing effect of the intronic miRNA is thought to be due to these three ribonucleic acid interferences. Path is one of the most efficient, specific, and safe (Lin et al . (2008) Frontiers in Bioscience 13 : 2216-2230). Meanwhile, the genetic recombinant nucleotide of the present invention is produced by a transcription system, and the transcription system is derived from a second type transcription system (Pol-II), a first type transcription system (Pol-I). And choose one of the viral transcription systems.

本發明揭露一內含子之用於基因調控層面之新穎功能,如圖3A及3B所示,基於intronic miRNA之剪接與處理之機制,本發明之較佳實施例係一第二型核醣核酸酶基因表現系統(Pol-II-mediated recombinant gene expression system)包含一能剪接之內含子(命名為SpRNAi),該SpRNAi能經由互補序列抑制特定基因。此SpRNAi係衍生自第二型核醣核酸聚合酶系統所形成之先驅核醣核酸(pre-mRNA)。剪接後,SpRNAi進一步被處理成成熟之基因靜默劑(如shRNA以及miRNA)。在內含子被移除後,外顯子之基因重組(recombinant)轉錄分子被連接而形成一成熟之訊息核醣核酸分子而進一步被轉譯成蛋白 質。本發明之基因重組核苷酸,進一步包含至少一用來連接表現該基因重組核苷酸之核醣核酸轉錄分子之表現載體之多限制酶切位(multiple restriction/cloning site);以及複數個用來形成該基因重組核苷酸之正確核醣核酸轉錄分子之轉錄與轉譯終止處(transcription and translation termination sites)。其中該內含子包含具有基因靜默效應物之內含子之介子(intronic insert)(也就是先驅微核醣核酸介子)、五端剪接處以及三端剪接處、分支點區以及多嘧啶區。 The present invention discloses a novel function of an intron for gene regulation, as shown in Figures 3A and 3B, based on the mechanism of splicing and processing of intronic miRNA, a preferred embodiment of the present invention is a second type ribonuclease gene expression system (Pol-II-mediated recombinant gene expression system) can comprise a splicing of intron (designated as SpRNAi), which can inhibit specific gene SpRNAi via complementary sequence. This SpRNAi is derived from a precursor ribonucleic acid (pre-mRNA) formed by a second type ribonucleic acid polymerase system. After splicing, SpRNAi is further processed into mature gene silencers (such as shRNA and miRNA). After the intron is removed, the exon-recombinant transcriptional molecules of the exons are joined to form a mature message ribonucleic acid molecule that is further translated into a protein. The recombinant nucleotide of the present invention further comprises at least one multiple restriction/cloning site for linking to a expression vector of a ribonucleic acid transcription molecule representing a recombinant nucleotide of the gene; and a plurality of The transcription and translation termination sites of the correct ribonucleic acid transcription molecule that forms the recombinant nucleotide of the gene. The intron comprises an intronic insert (ie, a precursor microRNA carrier) having a gene silencing effector, a five-terminal splicing site, a three-terminal splicing site, a branching point region, and a polypyrimidine region.

如圖3A所示,SpRNAi之必要成分包含數種一致之核苷酸序列,其中包括一五端剪接處(5'-splice site)、一分支點區(branch point motif,BrP)、一多嘧啶區(a poly-pyrimidine tract)以及一三端剪接處(3'-splice site)。此外,一類似shRNA之先驅微核醣核酸介子係插入SpRNAi中,其中此先驅微核醣核酸介子係位於五端剪接處與分支點區之間。此SpRNAi於核醣核酸剪接時能形成一套馬索(lariat)結構。剪接體之U2與U6小胞核核糖核蛋白(snRNPs)係參與在套馬索之鬆開與切除而使形成先驅微核醣核酸。此外,SpRNAi之三端包含一多轉譯停止子區,這是為了使intronic miRNA之剪接與NMD過程能精確地進行。當此多轉譯停止子(multiple translational stop codon region)表現於細胞質中之訊息核醣核酸,此多轉譯停止子能傳遞活化NMD系統路徑之訊息使任何異常之核醣核酸結構在細胞中被降解。然而,插入SpRNAi之該shRNA與pre-miRNA 能個別地被保留至Dicer剪接而形成成熟之siRNA與miRNA。再加上,為了於細胞中表現,我們將SpRNAi利用Drall限制酶切位接上一紅色螢光蛋白(red fluorescent protein,RGFP)基因(來自Heteractis crispa)而形成一基因重組之含紅色螢光蛋白之SpRNAi(SpRNAi-RGFP)基因,其中紅色螢光蛋白基因之第兩百零八個核苷酸位置被限制酶Drall作用後會產生一AG-GN核苷酸之斷點,並於斷點兩端產生三個核苷酸突出之結構,於SpRNAi嵌入之後此兩端能形成五端剪接處及三端剪接處。因為SpRNAi之嵌入造成紅色螢光蛋白無法正常表現,不過等內含子剪接後,此紅色螢光蛋白就能恢復正常表現,我們可以利用紅色螢光蛋白表現量來判定內含子之shRNA/miRNA所釋出的量,此時紅色螢光蛋白也能提供許多外顯子剪接促進子(exonic splicing enhancer,ESE)能幫助核醣核酸的剪接之正確與效率。 As shown in Figure 3A, the essential components of SpRNAi contain several identical nucleotide sequences, including a 5'-splice site, a branch point motif (BrP), and a polypyrimidine. A poly-pyrimidine tract and a 3'-splice site. In addition, a shRNA-like precursor microRNA carrier is inserted into SpRNAi , wherein the precursor microRNA carrier is located between the five-terminal splicing and the branching region. This SpRNAi forms a set of lariat structures upon splicing of ribonucleic acids. The U2 and U6 small nuclear ribonucleoproteins (snRNPs) of the splice body are involved in the release and excision of the set of horses to form the precursor microRNA. In addition, the three ends of SpRNAi contain a multi-translation stop region, which is to enable the intronic miRNA splicing and NMD processes to be performed accurately. When the multiple translational stop codon region is expressed in the cytoplasmic message ribonucleic acid, the multi-translating stopr can transmit a message that activates the NMD system pathway to degrade any abnormal ribonucleic acid structure in the cell. However, the shRNA and pre-miRNA inserted into SpRNAi can be individually retained to Dicer for splicing to form mature siRNA and miRNA. Plus, in order to show the cells, we will use Drall SpRNAi restriction sites connect a red fluorescent protein (red fluorescent protein, RGFP) gene (from Heteractis crispa) to form a recombinant gene containing the red fluorescence protein The SpRNAi ( SpRNAi-RGFP ) gene, in which the twenty-eighth nucleotide position of the red fluorescent protein gene is blocked by the restriction enzyme Drall , an AG-GN nucleotide breakpoint is generated, and two breakpoints are generated at the breakpoint. The terminal produces a structure in which three nucleotides protrude, and after the SpRNAi is inserted, the two ends can form a five-terminal splicing site and a three-terminal splicing site. Because the embedding of SpRNAi causes the red fluorescent protein to fail to perform normally, the red fluorescent protein can return to normal after the intron splicing. We can use the red fluorescent protein expression to determine the shRNA/miRNA of the intron. The amount released, at this time, red fluorescent protein can also provide many exonic splicing enhancers (ESE) to help the correctness and efficiency of ribonucleic splicing.

如圖3B所示之另一實施例中,本發明提供一使用人造合成核醣核酸剪接與處理元件之遺傳工程方法產生一非天然基因,例如以人造之五端剪接處、分支點區、多嘧啶區以及三端剪接處而形成人造之SpRNAi(人造內含子),此人造之SpRNAi包含至少一插入之核醣核酸結構,此結構可以係反意核醣核酸(antisense RNA)或shRNA或miRNA之結構。可藉由去氧核醣核酸合成器(DNA synthesizer)(來自Sigma-Genosys services(Woodlands,TX))來化學合成製造以及連接這些元件 (例如SpRNAi內含子如miR-tyr或內含子之介子如mir-302)。另一方面這些元件也能以限制酶來製造以及連接。此SpRNAi係可直接轉染至細胞中或是與不同細胞基因共同轉染入細胞而被第二型轉錄聚合酶系統作用。經過核醣核酸剪接與訊息核醣核酸成熟作用後,SpRNAi中所插入之核醣核酸結構將經由細胞內剪接體及NMD系統作用而能具抑制特定基因轉錄分子。此時,外顯子能正常連接以形成成熟之訊息核醣核酸而表現出該基因之功能,例如報導基因轉譯或是以下幾種標誌蛋白:紅色螢光蛋白、綠色螢光蛋白(green fluorescent protein)、螢光素(luciferase)、乳糖基因調控組(lac-Z)以及它們之衍生物。關於報導/標誌蛋白之存在對於了解shRNA/miRNA分子存在之位置係有用的,尤其在於辨認基因靜默效果方面。 In another embodiment, as shown in Figure 3B, the present invention provides a genetic engineering method using synthetic synthetic ribonucleic splicing and processing elements to generate a non-native gene, such as a man-made five-terminal splicing site, a branching point region, and a polypyrimidine. and a three-terminal region of the splice is formed of SpRNAi an artificial (man-made intron), the SpRNAi this artificial structure comprising at least one RNA of insertion, this structure may be the structure-based or shRNA or miRNA of antisense RNA (antisense RNA). These elements can be chemically synthesized and linked by a DNA synthesizer (from Sigma-Genosys services (Woodlands, TX)) (eg, a spRNAi intron such as a miR-tyr or an intron such as a meson) Mir-302). On the other hand these elements can also be manufactured and linked with restriction enzymes. This SpRNAi line can be directly transfected into cells or co-transfected into cells with different cellular genes to be manipulated by a second type of transcriptional polymerase system. After ribonucleic splicing and message ribonucleic acid maturation, the ribonucleic acid structure inserted in SpRNAi will inhibit the transcription of specific genes via intracellular splices and NMD systems. At this point, the exon can be normally ligated to form a mature message ribonucleic acid to display the function of the gene, such as reporter gene translation or the following marker proteins: red fluorescent protein, green fluorescent protein (green fluorescent protein) , luciferase, lactose gene regulatory group (lac-Z) and derivatives thereof. The presence of reporter/marker proteins is useful for understanding the location of shRNA/miRNA molecules, particularly in identifying gene silencing effects.

此外,成熟訊息核醣核酸藉由連接外顯子也可能對於傳統基因治療去修補損害或是遺失之基因有幫助,也可能對於提高特定基因表現有幫助。在其他層面,本發明提供新穎之成分(SpRNAi(人造內含子))與方法以用來引發細胞經由內含子之核醣核酸剪接及處理機制產生基因靜默分子,此靜默分子係經由反意基因剔除或核醣核酸干擾效果來抑制特定基因功能。衍生自人造內含子SpRNAi之基因靜默分子包含反意核醣核酸(antisense RNA)、核糖酵素(ribozyme)、短臨時核醣核酸(short temporary RNA,stRNA)、雙股核醣核酸、小干擾核醣核酸(small interfering RNA,siRNA)、微小無密碼子之核醣核酸(tiny non-coding RNA,tncRNA)、短小夾核醣核酸(short hairpin RNA,shRNA)、類似小夾核醣核酸(hairpin-like RNA structure)、微核醣核酸(microRNA,miRNA)以及與核醣核酸干擾有關之前/先驅核醣核酸結構。在本發明中,基因重組核苷酸係一具有內含子之細胞本身基因。藉由使用這些內含子之核醣核酸(重組核苷酸)所衍生基因靜默試劑對於特定基因之靜默具有效果,而這些重組核苷酸係自致致病轉殖基因(pathogenic transgenes)、病毒基因(viral genes)、哺乳動物基因、跳躍基因、突變基因(mutant genes)、致癌基因(oncogenes)、與疾病相關小核醣核酸基因(disease-related small RNA genes)、有蛋白質編碼基因以及任何具有或不具有蛋白轉譯相關之基因以及以上基因混合之基因選其一。 In addition, mature message ribonucleic acid may also help to repair damaged or lost genes by traditional gene therapy, and may also help to improve specific gene expression. In other aspects, the invention provides novel components ( spRNAi (artificial intron)) and methods for inducing a cell to generate a gene silencing molecule via an intron ribonuclease splicing and processing mechanism, the silencing molecule via an antisense gene Elimination or RNA interference effects to inhibit specific gene function. Gene silencing molecules derived from the artificial intron SpRNAi include antisense RNA, ribozyme, short temporary RNA (stRNA), double-stranded ribonucleic acid, small interfering ribonucleic acid (small) Interfering RNA, siRNA), tiny non-coding RNA (tncRNA), short hairpin RNA (shRNA), hairpin-like RNA structure, microribose Nucleic acids (microRNAs, miRNAs) and pre/precursor ribonucleic acid structures involved in ribonucleic acid interference. In the present invention, the recombinant nucleotide of the gene is a gene of a cell itself having an intron. Gene silencing reagents derived from ribonucleic acids (recombinant nucleotides) using these introns have an effect on the silencing of specific genes, which are derived from pathogenic transgenes, viral genes. (viral genes), mammalian genes, jumping genes, mutant genes, oncogenes, disease-related small RNA genes, protein-coding genes, and any with or without A gene with a protein translation-related gene and a mixture of the above genes is selected.

本發明使用藉由此第二型轉錄聚合酶之含紅色螢光蛋白之SpRNAi之表現系統(SpRNAi-RGFP expression system),我們已經成功地於人類前列腺癌細胞(prostate cancer LNCaP)、人類子宮頸癌(human cervical cancer HeLa)以及大鼠神經幹細胞細胞(rat neuronal stem HCN-A94-2 cell)(Lin et al.(2006a)Methods Mol Biol.342:295-312)產生具有基因靜默效果之成熟shRNA以及miRNA,如同在斑馬魚(zebrafish)、雞以及小鼠(mouse)體內(Lin et al.(2006b)Methods Mol Biol.342:321-334)。我們已經於斑馬魚與許多人類細胞株針對綠色螢光蛋白與其他細胞基因測試過不同先驅微核醣核酸結構,並得知較有效之基因靜 默微核醣核酸係介於五端剪接處與分支點區之間。如圖3C所示,有一顯著之基因靜默效果發生於轉染針對綠色螢光蛋白之先驅微核醣核酸(anti-EGFP pre-miRNA)之組別(line4)(也就是miR組),然而於其他實驗組與對照組並無任何效果被偵測到;這些實驗組與對照組依序(由左到右)係1、控制組(blank vector control,Ctl)。2、針對愛滋病病毒蛋白(HIV-p24)之先驅微核醣核酸的對照組。3、針對反意綠色螢光蛋白且無小夾結構(antisense EGFP insert without the hairpin loop structure)之anti組以及5、反轉先驅微核醣核酸序列之miR*組;該反轉先驅微核醣核酸序列組係完全互補於抗綠色螢光蛋白之先驅微核醣核酸(anti-EGFP pre-miRNA,miR*)。於非針對基因,例如紅色螢光蛋白以及肌動蛋白(actin)並無靜默現象發生,表示SpRNAi之微核醣核酸介入之核醣核酸干擾係具高度專一性。為了證實核醣核酸剪接於內含子之核醣核酸干擾效果,我們已經測試這些不同之第二型轉錄聚合酶之含紅色螢光蛋白之SpRNAi之表現系統,如圖3D顯示由左到右係為1.無內含子之紅色螢光蛋白載體組2.具有內含子之抗綠色螢光蛋白先驅微核醣核酸之紅色螢光蛋白載體組(vector expressing RGFP with an intronic anti-EGFP pre-miRNA insert)3.具有內含子之抗綠色螢光蛋白先驅微核醣核酸(五端剪接處缺陷)之紅色螢光蛋白載體組。由北方墨點法(Northern bolting)分析資料顯示,成熟之miRNA(也就是內含子之微核醣核酸)只有在具有內含 子之抗綠色螢光蛋白先驅微核醣核酸之紅色螢光蛋白載體組形成出來,因此證實需要靠細胞內剪接機制來形成intronic miRNA。 The present invention uses the SpRNAi-RGFP expression system of the red fluorescent protein-containing SpRNAi by this second type of transcription polymerase, and we have succeeded in human prostate cancer cells (prostate cancer LNCaP), human cervical cancer. (human cervical cancer HeLa) and rat neuronal stem HCN-A94-2 cell (Lin et al . (2006a) Methods Mol Biol . 342 :295-312) produce mature shRNA with gene silencing effect and miRNAs, as in zebrafish, chicken, and mouse (Lin et al . (2006b) Methods Mol Biol . 342 :321-334). We have tested different precursor microRNAs in zebrafish and many human cell lines against green fluorescent protein and other cellular genes, and learned that the more efficient gene silent microRNA is between the five-terminal splicing and branching regions. between. As shown in Figure 3C, a significant gene silencing effect occurs in the group of trans- GFP pre-miRNAs (line4) transfected with green fluorescent protein (ie, the miR group), however other No effect was detected in the experimental group and the control group; these experimental groups and the control group were sequentially (left to right) 1 and control group (blank vector control, Ctl). 2. A control group for the pioneering microRNA of the HIV virus ( HIV-p24 ). 3. The anti group of the antisense EGFP insert without the hairpin loop structure and the miR* group of the inverted precursor microRNA sequence; the inverted precursor microRNA sequence The lineage is fully complementary to the anti- EGFP pre-miRNA (miR*) against green fluorescent protein. There is no silent phenomenon in non-targeted genes, such as red fluorescent protein and actin, indicating that the RNA interference of the RNA interference of SpRNAi is highly specific. To confirm the ribonucleic acid interference effect of ribonucleic acid splicing in introns, we have tested the expression system of the red fluorescent protein-containing SpRNAi of these different second-type transcriptases, as shown in Figure 3D from left to right. . The red fluorescent protein carrier group without introns 2. The vector expressing RGFP with an intronic anti- EGFP pre-miRNA insert 3. A group of red fluorescent protein carriers having an intron-resistant green fluorescent protein precursor microRNA (five-terminal splicing defect). According to Northern bolting analysis, the mature miRNA (ie, the microRNA of the intron) is only in the red fluorescent protein carrier group with the anti-green fluorescent protein precursor microRNA of the intron. It was formed, thus confirming the need to form an intronic miRNA by an intracellular splicing mechanism.

此外,我們已經進一步決定較佳之先驅微核醣核酸介子(pre-miRNA insert)之結構設計以用來經由RISC複合體來誘發最佳之基因靜默效應(Lin et.al.(2005)Gene 356:32-38)。RISC複合體係一蛋白核醣核酸複合體(protein-RNA complex),能導致特定基因轉錄分子降解或經由核醣核酸干擾機制抑制轉譯。對於RISC複合體之形成,雙股siRNA扮演重要之角色,此雙股siRNA在功能上是相異的,而且RISC複合體是傾向對其中一股進行反應。基於siRNA之模式,推測miRNA及與其互補之核醣核酸所形成之雙股核醣核酸對於RISC複合體之形成也很重要,假如此觀點為真,RISC複合體對於miRNA及與其互補之核醣核酸應該皆會被降解才對,然而根據實驗結果發現,RISC複合體對miRNA具有特定偏好。 In addition, we have further determined the structural design of the preferred precursor-pre-miRNA insert to induce optimal gene silencing effects via the RISC complex (Lin et.al. (2005) Gene 356 :32 -38). The RISC complex, a protein-RNA complex, can cause the degradation of specific gene transcriptional molecules or inhibit translation via a ribonucleic acid interference mechanism. For the formation of RISC complexes, double-stranded siRNA plays an important role, the double-stranded siRNAs are functionally distinct, and the RISC complexes tend to respond to one of them. Based on the siRNA model, it is speculated that the ribonucleic acid formed by the miRNA and its complementary ribonucleic acid is also important for the formation of the RISC complex. If this is true, the RISC complex should be both miRNA and its complementary ribonucleic acid. Degraded is correct, however, based on experimental results, the RISC complex has a specific preference for miRNA.

如圖4A所示,兩個具有不同微核醣核酸(miRNA)之內含子之介子表現載體(different intronic miRNA-inserted SpRNAi-RGFP expression vectors)分別命名為miRNA*-stemloop-miRNA[1](也就是圖4A上方所標示之環型表現載體)及miRNA-stemloop-miRNA*[2](也就是圖4A下方所標示之環型表現載體)(miRNA*係代表一能與成熟miRNA序列互補之miRNA)。這兩組具有不同微核醣核酸之載體包含 相同的雙股圓環結構(stemloop structure),該圓環結構能對EGFP基因第280到第302之核苷酸序列進行靜默效應。轉染這些載體(60 ug each)進入斑馬魚幼胚24小時後,經由mirVana微核醣核酸分離管柱中之latex beads將具有靜默效應潛力之微核醣核酸(miRNA)沉澱下來。經序列比對之後,較有靜默效應之微核醣核酸(miRNA)被揀選出來係為miRNA-stemloop-miRNA*[2],如圖4A所示。因為成熟微核醣核酸(miRNA)只有於轉染miRNA-stemloop-miRNA*[2]之斑馬魚中被發現,因此推論RISC複合體傾向是與miRNA-stemloop-miRNA*[2]作用而非miRNA*-stemloop-miRNA[1]。在此實驗,利用經由肌動蛋白啟動子表達之斑馬魚(Tg(actin-GAL4:UAS-gfp))來進行實驗,此斑馬魚會一直於各類細胞中表達綠色螢光蛋白。如圖4B所示,於此斑馬魚轉染SpRNAi-RGFP載體並表達一可當為指標蛋白之紅色螢光蛋白。結果觀察到胃腸部份SpRNAi-RGFP之基因靜默效應較弱,推測是此部位之核醣核酸酶RNase活性較強之故。圖4C中,西方墨點法(Western blotting)可偵測到miRNA*-stemloop-miRNA[1](miR*組)以及miRNA-stemloop-miRNA*[2](miR組)之紅色螢光蛋白表現,然而綠色螢光蛋白之基因靜默只有於轉染miRNA-stemloop-miRNA*[2](miR組)之斑馬魚被發現,如圖4B。因miRNA*-stemloop-miRNA[1]及miRNA-stemloop-miRNA*[2]之結構很像似,因此內含子之先驅微核醣核酸 (intronic pre-miRNA)之圓環結構(stem-loop)可能與RISC複合體形成成熟微核醣核酸(mature miRNA)有關。 As shown in Figure 4A, two different intronic miRNA-inserted SpRNAi-RGFP expression vectors were named miRNA*-stemloop-miRNA [1] (also This is the circular expression vector indicated above Figure 4A and miRNA-stemloop-miRNA* [2] (also known as the circular expression vector shown below in Figure 4A) (miRNA* represents a miRNA that is complementary to the mature miRNA sequence) ). The two sets of vectors having different microRNAs comprise the same double loop structure, which can silence the nucleotide sequences 280 to 302 of the EGFP gene. After transfection of these vectors (60 ug each) into the zebrafish embryos for 24 hours, microRNAs (miRNAs) with silent effect potential were precipitated via latex beads in the mirVana microribonucleic acid separation column. After sequence alignment, the silencing effect of the microRNA (miRNA) was selected as miRNA-stemloop-miRNA* [2], as shown in Figure 4A. Because mature microRNAs (miRNAs) are only found in zebrafish transfected with miRNA-stemloop-miRNA*[2], it is postulated that RISC complexes tend to interact with miRNA-stemloop-miRNA*[2] rather than miRNA* -stemloop-miRNA [1]. In this experiment, experiments were carried out using zebrafish (Tg (actin-GAL4: UAS-gfp)) expressed by an actin promoter, which has been expressing green fluorescent protein in various cells. As shown in Figure 4B, this zebrafish was transfected with the SpRNAi-RGFP vector and expressed a red fluorescent protein which can be used as an indicator protein. As a result, it was observed that the gene silencing effect of the gastrointestinal part of SpRNAi-RGFP was weak, and it was speculated that the RNase activity of this site was strong. In Figure 4C, Western blotting detected red fluorescent protein expression in miRNA*-stemloop-miRNA[1] (miR* group) and miRNA-stemloop-miRNA*[2] (miR group). However, the gene silencing of the green fluorescent protein was only found in the zebrafish transfected with miRNA-stemloop-miRNA*[2] (miR group), as shown in Fig. 4B. Because the structure of miRNA*-stemloop-miRNA[1] and miRNA-stemloop-miRNA*[2] is very similar, the intronic pre-miRNA of the intron premature-stem-loop May be associated with the formation of mature miRNAs in the RISC complex.

因為上述先驅微核醣核酸(pre-miRNA)之圓環結構太大,對於SpRNAi-RGFP載體之表現可能不佳,因此採用轉介核醣核酸(tRNA)之圓環(5’-(A/U)UCCAAGGGGG-3’)來取代原本較大的圓環結構,此較小的圓環被證明能加速微核醣核酸(miRNA)從核內運輸至核外。最近,本發明使用一改良之pre-mir-302圓環結構(如5’-GCTAAGCCAGGC-3’係SEQ.ID.NO.1以及5’-GCCTGGCTTAGC-3’係SEQ.ID.NO.2)能提供同樣快速之先驅微核醣核酸(pre-miRNA)運輸而且並不干擾轉介核醣核酸(tRNA)之運輸。此改良之pre-mir-302圓環結構能於胚胎幹細胞中高度表達,但於分化細胞中表達程度較低,因此,用此改良之pre-mir-302圓環結構並不會干擾本身之核醣核酸路徑。 Because the ring structure of the precursor micro-ribonucleic acid (pre-miRNA) is too large, the performance of the SpRNAi-RGFP vector may be poor, so the ring of the trans-ribonucleic acid (tRNA) is used (5'-(A/U) UCCAAGGGGG-3') replaces the larger ring structure, which has been shown to accelerate the transport of microRNAs (miRNAs) from the nucleus to the outside of the nucleus. Recently, the present invention uses a modified pre-mir-302 ring structure (e.g., 5'-GCTAAGCCAGGC-3' SEQ. ID. NO. 1 and 5'-GCCTGGCTTAGC-3' SEQ. ID. NO. 2) It provides the same rapid precursor micro-ribonucleotide (pre-miRNA) transport and does not interfere with the transport of transgenic ribonucleic acid (tRNA). The improved pre-mir-302 ring structure is highly expressed in embryonic stem cells but is less expressed in differentiated cells, and thus the modified pre-mir-302 ring structure does not interfere with its own ribose. Nucleic acid pathway.

關於先驅微核醣核酸(pre-miRNA)之插入過程,因為該基因重組SpRNAi-RGFP之限制酶切位於五端及三端分別是PvuIMluI,此前驅內含子之介子(intronic insert)能被許多其他專一性基因之先驅微核醣核酸(pre-miRNA)取代而切除(例如,抗綠色螢光蛋白及抗酪胺酸酶(anti-Tyr)之先驅微核醣核酸)。藉由改變先驅微核醣核酸介子(pre-miRNA insert)而用於對抗或靜默不同基因轉錄分子,此內含子之微核醣核酸(intronic miRNA)產生系統能被應用成一用於誘發標的基因靜默效應之強大工具。為了確定係正確的介子(insert)尺寸,可藉由PCR 技術將SpRNAi-RGFP(10 ng)利用引子(primer)(例如,5’-CTCGAGCATG GTGAGCGGCC TGCTGAA-3’及5’-TCTAGAAGTT GGCCTTCTCG GGCAGGT-3’)於94℃(1 min.)、52℃(1 min.)、及70℃(1 min.)複製25個循環週期(cycles)。最後PCR之終產物再經由2% agarose gel層析並利用gel extraction kit(Qiagen,CA)純化並序列確認。 Regarding the insertion process of the precursor micro-ribonucleic acid (pre-miRNA), since the restriction enzyme digestion of the recombinant SpRNAi-RGFP is located at the five-terminal and three-terminal, respectively, PvuI and MluI , the intronic insert can be Many other specific gene precursors are replaced by ex-miRNA microRNAs (eg, anti-green fluorescent protein and anti-tyrosin precursor microRNA). By using a precursor microRNA pre-miRNA insert to counter or silence different gene transcription molecules, the intronic miRNA production system of this intron can be applied to induce gene silencing effects. Powerful tool. In order to determine the correct size of the insert, SpRNAi-RGFP (10 ng) can be utilized by PCR (eg, 5'-CTCGAGCATG GTGAGCGGCC TGCTGAA-3' and 5'-TCTAGAAGTT GGCCTTCTCG GGCAGGT-3 ') 25 cycles were replicated at 94 ° C (1 min.), 52 ° C (1 min.), and 70 ° C (1 min.). The final product of the final PCR was further purified by 2% agarose gel chromatography and confirmed by gel extraction kit (Qiagen, CA).

本發明採用一第二型聚合酶(Pol-II)之SpRNAi-RGFP表現系統並利用此系統而發展出用於皮膚照料之新穎化妝品。於較佳實施例中,本發明提供一使用非自然發生之內含子(intron)之方法,此方法能使該內含子被皮膚細胞處理成shRNA與miRNA而誘發皮膚色素有關基因及皮膚老化有關基因之基因靜默效應。此方法包含幾個步驟:a步驟係提供1)一能表現針對皮膚受質之標的基因及2)一能於皮膚受質中產生基因靜默效應之具有內含子之前驅核醣核酸轉錄分子(primary RNA transcript)之重組基因;b步驟用該具有內含子之前驅核糖核酸轉錄分子(primary RNA transcript)處理該皮膚受質而使標的基因功能被靜默或抑制。該皮膚受質能於生物体外(in vitro)、体內(in vivo)、來自體內的體外試驗或間接體內(ex vivo)等情況下表達標的基因。在某些層面,能產生基因靜默效應之先驅微核醣核酸轉錄分子(pre-miRNA)(如同intronic insert)能對特定標定基因例如,酪胺酸酶(Tyr)、透明質酸酶(Hyal)、透明質酸之受質如黏附分子CD44、CD168、致癌基因及NF-kappa B與其 他與色素形成與皮膚老化相關基因具有靜默或抑制效應。於其他實施例中,先驅微核醣核酸介子(pre-miRNA insert)(或本發明所稱之基因重組核苷酸)能藉由遺傳工程方法併入細胞基因之內含子片段。一般來說,這種內含子插入技術包含類似質體之轉殖基因轉染(plasmid-like transgene transfection)、同源基因合併交換(homologuous recombination)、轉位子傳遞(transposon delivery)、去氧核醣核酸接合(DNA ligation)、插入轉殖基因(transgene insertion)、跳躍基因嵌合(jumping gene integration)及反轉錄病毒感染(retroviral infection)。 The present invention employs a second type polymerase (Pol-II) SpRNAi-RGFP expression system and utilizes this system to develop novel cosmetics for skin care. In a preferred embodiment, the present invention provides a method of using a non-naturally occurring intron which enables the intron to be treated by shRNA and miRNA by skin cells to induce skin pigment related genes and skin aging. Gene silencing effects on genes. The method comprises several steps: a step provides 1) a gene capable of expressing a target for skin receptors and 2) an intron-producing ribonucleic acid transcription molecule capable of generating a gene silencing effect in a skin receptor (primary Recombinant gene of RNA transcript); step b treatment of the skin receptor with the intron pre-transcription RNA transcript to silence or inhibit the function of the target gene. The skin is capable of expressing the underlying gene in vitro , in vivo , in vitro assays from the body, or ex vivo . At some levels, a precursor microRNA transcriptional molecule (pre-miRNA) that produces a gene silencing effect (like an intronic insert) can target specific genes such as tyrosinase (Tyr), hyaluronidase (Hyal), The receptors for hyaluronic acid such as adhesion molecules CD44, CD168, oncogenes and NF-kappa B have silent or inhibitory effects with other genes involved in pigmentation and skin aging. In other embodiments, a precursor pre-miRNA insert (or a recombinant nucleotide of the invention) can be incorporated into an intron fragment of a cellular gene by genetic engineering. In general, this intron insertion technique involves plasmid-like transgene transfection, homologous recombination, transposon delivery, and deoxyribose DNA ligation, insertion of transgene insertion, jumping gene integration, and retroviral infection.

在另一實施例中,本發明之重組基因表現與先驅訊息核醣核酸(pre-mRNA)相關。該重組基因係由外顯子(exon)與內含子(intron)所組成。外顯子於核醣核酸剪接後能被連接而形成一功能性訊息核醣核酸(mRNA)進而轉譯成蛋白,同時內含子被釋出細胞核進而被處理成具有一具有特定基因靜默功能之基因靜默效應物(gene silencing effector),該基因靜默效應物(gene silencing effector)包含反意核醣核酸(antisense RNA)、微核醣核酸(miRNA)、shRNA、siRNA、雙股核醣核酸以及以上核醣核酸之先驅物(例如,pre-miRNA與piRNA)。這些內含子之基因靜默效應物(intronic gene silencing effector)可能包含一類似髮夾之圓環結構(hairpin-like stem-loop structure)(約等同於類似小夾核苷酸),此結構序列係同源於5’-GCTAAGCCAGGC-3’(SEQ.ID.NO.1)或是5’-GCCTGGCTTAGC-3’ (SEQ.ID.NO.2),該序列能促進正確之核醣核酸分子之剪接也能促進該分子由細胞核運輸至細胞質中。而且這些內含子之介子(intronic insert)包含互補或同源於特定標的基因之序列。該同源或互補之內含子之介子(intronic insert)序列大小約十五個鹼基對到一千五百個鹼基對之間,較佳係十八個到二十七個鹼基對左右。這些內含子之介子(intronic insert)係類似小夾核苷酸與標的基因序列之互補或同源率約30%到100%之間,較佳為35%到49%之間,該內含子之介子(intronic insert)係一反意核苷酸包含對於欲靜默基因之序列30%到100%之序列互補率,而較佳之序列互補率範圍為90%到100%。 In another embodiment, the recombinant gene of the invention behaves in association with a precursor message ribonucleic acid (pre-mRNA). The recombinant gene consists of an exon and an intron. Exons can be ligated after ribonuclease splicing to form a functional message ribonucleic acid (mRNA) and then translated into protein, while introns are released from the nucleus and processed into a gene silencing effect with a specific gene silencing function. Gene silencing effector, the gene silencing effector contains antisense RNA, microRNA (miRNA), shRNA, siRNA, double-stranded ribonucleic acid, and precursors of the above ribonucleic acid ( For example, pre-miRNA and piRNA). The intronic gene silencing effector of these introns may comprise a hairpin-like stem-loop structure (approximately equivalent to a small-clamped nucleotide), which is a sequence of this structure. Homologous to 5'-GCTAAGCCAGGC-3' (SEQ.ID.NO.1) or 5'-GCCTGGCTTAGC-3' (SEQ. ID. NO. 2), which promotes splicing of the correct ribonucleic acid molecule and facilitates transport of the molecule from the nucleus to the cytoplasm. Moreover, these intronic inserts contain sequences that are complementary or homologous to a particular target gene. The sequence of the intronic insert of the homologous or complementary intron is between about fifteen base pairs and one thousand five hundred base pairs, preferably eighteen to twenty-seven base pairs. about. These intronic inserts are similar to the complementarity or homology of small nucleotides to the target gene sequence of between about 30% and 100%, preferably between 35% and 49%. An intronic insert is a reverse nucleotide comprising a sequence complementation rate of 30% to 100% for the sequence of the gene to be silenced, and a preferred sequence complementation rate ranges from 90% to 100%.

此外,非自然發生之內含子之五端包含一剪接處(5’-splicing site or 5’ clip),其中該五端剪接處係一核苷酸序列並同源於5’-GTAAGAGK-3’(SEQ.ID.NO.3)或是GU(A/G)AGU序列(例如,5’-GTAAGAGGAT-3’、5’-GTAAGAGT-3’、5’-GTAGAGT-3’及5’-GTAAGT-3’)。三端剪接處(3’-splicing site or 3’ clip)序列係同源於GWKSCYRCAG(SEQ.ID.NO.4)或CT(A/G)A(C/T)NG序列(例如,5’-GATATCCTGCAG-3’、5’-GGCTGCAG-3’、5’-CCACAG-3’)。此外,一分支點(branch point)序列係位於五端與三端剪接處之間,該分支點區位於一核苷酸序列同源於5’-TACTWAY-3’(SEQ.ID.NO.5)(例如,5’-TACTAAC-3’及5’-TACTTAT-3’),該分支點區包含一分支點,而該分支點係一腺核苷(adenosine,A)能形成一套馬索(lariat)結構。此外該多嘧 啶區(poly-pyrimidine tract)位於該分支點區與三端剪接處之間,其中該多嘧啶區是一具有許多胸腺嘧啶(Thymine)與胞嘧啶(Cytosine)之核苷酸序列,該多嘧啶區(poly-pyrimidine tract)之核苷酸序列同源於5’-(TY)m(C/-)(T)nS(C/-)-3’(SEQ.ID.NO.6)與5’-(TC)nNCTAG(G/-)-3’(SEQ.ID.NO.7)。其中,”m”與”n”係指大於等於一之多重複序列,較佳m之序列數是一到三之間而n之序列數是七到十二之間。”-“係指無任何核苷酸。全部這些內含子是藉由一些連接核苷酸來連接,基於37CFR1.822規定(台灣”核苷酸及胺基酸序列表記載格式”亦同),W係指腺嘌呤(adenine(A))or胸腺嘧啶(thymine(T))/尿嘧啶(uracil(U)),K係指鳥嘌呤(guanine(G))或胸腺嘧啶(T)/尿嘧啶(U),S係指胞嘧啶(C)或鳥嘌呤(G),Y係指胞嘧啶(C)或胸腺嘧啶(T)/尿嘧啶(U),R係指腺嘌呤(A)或鳥嘌呤(G)以及N係指腺嘌呤(A)、胞嘧啶(C)、鳥嘌呤(G)或胸腺嘧啶(T)/尿嘧啶(U)或其他。 In addition, the five-terminal end of the non-naturally occurring intron comprises a 5'-splicing site or 5' clip, wherein the five-terminal splicing is a nucleotide sequence homologous to 5'-GTAAGAGK-3 '(SEQ.ID.NO.3) or GU(A/G)AGU sequence (eg, 5'-GTAAGAGGAT-3', 5'-GTAAGAGT-3', 5'-GTAGAGT-3' and 5'- GTAAGT-3'). The 3'-splicing site or 3' clip sequence is homologous to the GWKSCYRCAG (SEQ.ID.NO.4) or CT(A/G)A(C/T)NG sequence (eg, 5' -GATATCCTGCAG-3', 5'-GGCTGCAG-3', 5'-CCACAG-3'). In addition, a branch point sequence is located between the five-terminal and three-terminal splicing, and the branch point region is located in a nucleotide sequence homologous to 5'-TACTWAY-3' (SEQ.ID.NO.5). (eg, 5'-TACTAAC-3' and 5'-TACTTAT-3'), the branching point region contains a branching point, and the branching point is an adenosine (A) capable of forming a set of horses (lariat) structure. In addition to the polypyrimidine A poly-pyrimidine tract is located between the branching point region and a three-terminal splicing region, wherein the polypyrimidine region is a nucleotide sequence having a plurality of thymines (cytosine) and a cytosine (Cytosine), the polypyrimidine The nucleotide sequence of the poly-pyrimidine tract is homologous to 5'-(TY)m(C/-)(T)nS(C/-)-3' (SEQ.ID.NO.6) and 5 '-(TC)nNCTAG(G/-)-3' (SEQ.ID.NO.7). Wherein, "m" and "n" mean a repeating sequence of one or more, preferably the number of sequences of m is between one and three and the number of sequences of n is between seven and twelve. "-" means no nucleotides. All of these introns are linked by a number of linked nucleotides, based on 37 CFR 1.822 (Taiwan "nucleotide and amino acid sequence listing format"), and W is adenine (A) ) or thymine (thymine (T)) / uracil (U), K refers to guanine (G) or thymine (T) / uracil (U), S refers to cytosine ( C) or guanine (G), Y refers to cytosine (C) or thymine (T) / uracil (U), R refers to adenine (A) or guanine (G) and N refers to adenine (A), cytosine (C), guanine (G) or thymine (T) / uracil (U) or others.

在本發明之另一較佳實施例中,基因重組核苷酸係可被重組併入表現載體以用於基因轉染。該表現載體包含質體(plasmids)、柯斯盾粒(cosmids)、噬菌粒(phagemids)、酵母人工染色體yeast artificial chromosomes、跳躍基因(jumping genes)、轉位子(transposons)、轉殖基因(transgene)、反轉位子(retrotransposons)、反轉錄病毒載體(retroviral vectors)、病毒載體等慢病毒載體(lentiviral vectors)、λ載體(lambda vectors)、腺病毒載體(adenoviral(AMV)vectors)、腺相關病毒載體(adeno-associated viral(AAV)vectors)、改性的病毒性肝炎(modified hepatitis-viral(HBV)vectors)、巨細胞病毒相關的病毒載體(cytomegalovirus(CMV)-associated viral vectors)與植物相關花葉病毒(plant-associated mosaic virus)其中例如,煙草花葉病毒(tabacco mosaic virus(TMV))、番茄花葉病毒(tomato mosaic virus(ToMV))、花椰菜花葉病毒(Cauliflower mosaic virus(CaMV))與楊樹花葉病毒(poplar mosaic virus(PopMV))。於轉染SpRNAi-RGFP過程中,表現不同基因靜默效應物之內含子之該等載體能用於達到單一或複數個標的基因之靜默效應。在其他實施例中,複數個不同基因靜默效應物能自SpRNAi-RGFP之shRNA介子(insert)產生而使眾多基因靜默。此方法之優勢係藉由使用轉殖基因轉染或病毒感染而提供一穩定及相對長期之特定基因靜默效應。其中,本發明經由細胞內核醣核酸剪接及處理機制能產生核醣核酸干擾基因靜默分子(RNAi-related gene silencing molecules),該分子包含小干擾核醣核酸(small interfering RNA,siRNA)、微核醣核酸(microRNA(miRNA))及小夾核醣核酸(small hairpin RNA(shRNA))。並由細胞內特定基因核醣核酸啟動子(promoter)所控制,例如,第二型核醣核酸聚合酶啟動子(Pol-II promoter)及病毒啟動子。該病毒啟動子包含細胞巨大病毒(cytomegalovirus(CMV))、逆轉錄病毒長末端區域(retrovirus long-terminal region(LTR))、B型肝炎病毒(hepatitis B virus(HBV))、腺病毒(adenovirus(AMV))、腺相關病毒(adeno-associated virus(AAV))及植物相關花葉病毒(plant-associated mosaic virus)等病毒之核醣核酸啟動子。例如,慢病毒(lentiviral LTR)啟動子能於每個細胞內提供超過5x105複製的先驅訊息核醣核酸。然而,插入一對藥物敏感之抑制子(repressor)於這些病毒啟動子之前端而能控制其表現速率(expression rate)。此抑制子能被化學藥物或抗生素抑制,這些抗生素包含G418、四環素(tetracycline)、新黴素(neomycin)、安比西林(ampicillin)、康黴素(kanamycin)及上述抗生素之衍生物。 In another preferred embodiment of the invention, the recombinant gene nucleotide sequence can be recombinantly incorporated into a performance vector for gene transfection. The expression vector comprises plasmids, cosmids, phagemids, yeast artificial chromosomes, jumping genes, transposons, transgenes (transgenes) ), retrotransposons, retroviral vectors, viral vectors such as lentiviral vectors, lambda vectors, adenoviral vectors (AMV) vectors, adeno-associated viruses Vector (adeno-associated viral (AAV) vectors), modified hepatitis-viral (HBV) vectors, cytomegalovirus (CMV)-associated viral vectors, and plant-related flowers Plant-associated mosaic virus, for example, tabacco mosaic virus (TMV), tomato mosaic virus (ToMV), Cauliflower mosaic virus (CaMV) And poplar mosaic virus (PopMV). In the process of transfection of SpRNAi-RGFP , these vectors which exhibit introns of different gene silencing effectors can be used to achieve the silent effect of a single or multiple target genes. In other embodiments, a plurality of different gene silencing effectors can be generated from the shRNA meson of SpRNAi-RGFP to silence a plurality of genes. The advantage of this approach is to provide a stable and relatively long-term specific gene silencing effect by using transgenic gene transfection or viral infection. Among them, the present invention can generate RNAi-related gene silencing molecules via a cell-nuclear chromosomal splicing and processing mechanism, and the molecule comprises small interfering RNA (siRNA) and microRNA (microRNA). (miRNA)) and small hairpin RNA (shRNA). It is controlled by a specific gene ribonucleic acid promoter in the cell, for example, a second type ribonucleic acid polymerase promoter (Pol-II promoter) and a viral promoter. The viral promoter comprises a cytomegalovirus (CMV), a retrovirus long-terminal region (LTR), a hepatitis B virus (HBV), and an adenovirus (adenovirus). AMV)), adeno-associated virus (AAV) and ribonucleic acid promoters of viruses such as plant-associated mosaic virus. For example, the lentiviral LTR promoter provides more than 5x10 5 copies of the precursor message ribonucleic acid per cell. However, a pair of drug-sensitive repressors are inserted at the front of these viral promoters to control their expression rate. The inhibitor can be inhibited by chemical drugs or antibiotics, including G418, tetracycline, neomycin, ampicillin, kanamycin, and derivatives of the above antibiotics.

除了新穎皮膚照護用途外,本發明潛在性應用包含皮膚治療,例如藉由靜默或抑制疾病相關基因、以抗病毒基因之表皮疫苗、用於微生物相關致病菌之外部治療、皮膚訊息傳導路徑之研究及結合生物晶片基因功能之快速檢驗方法等。本發明也能當成在皮膚細胞上一研究基因功能之工具或當成用來改善皮膚狀態之成分與方法,此皮膚狀態包含正常、病態、癌化、病毒感染、微生物感染、生理疾病、遺傳突變之動物或人類皮膚。 In addition to novel skin care applications, the potential applications of the present invention include skin treatments, such as by silencing or inhibiting disease-related genes, epidermal vaccines against viral genes, external treatments for microbial-related pathogens, and skin message conduction pathways. Research and combination of rapid test methods for biochip gene function. The present invention can also be used as a tool for studying gene function on skin cells or as a component and method for improving skin condition, which includes normal, pathological, cancerous, viral infection, microbial infection, physiological disease, genetic mutation. Animal or human skin.

本發明提供一於細胞內生產內含子核醣核酸(intronic RNA)之新穎方法,較佳係能產生成熟siRNA、miRNA及shRNA,該等核醣核酸能誘發核醣核酸干擾基因靜默效應(RNAi/PTGS -associated gene silencing effects)。其中,細胞能作用於本發明之內含子之介子(intronic insert)而產生單一或多重基因靜默效應物,例如,抗綠色螢光蛋白之先驅微核醣核酸(pre-miRNA)被異體表現於斑馬魚上,如圖4A所示,而產生兩組成熟微核醣核酸(mir-EGFP 282/300與mir-EGFP280-302),這暗示著單一SpRNAi之介子(insert)具有產生超過一種的基因靜默效應物(gene-silencing effectors)。而不同的剪接子(spliced RNA effectors)能產生正股(sense)或反意(antisense)構型。在某些例子中,被剪接之核醣核酸能與一些標的基因轉錄分子雜交而形成雙股核醣核酸進而驅動核醣核酸干擾效應。同時,siRNA、miRNA及shRNA在本發明之表現載體上表達能減輕核醣核酸被快速降解之疑慮。 The present invention provides a novel method for producing intronic RNA in cells, preferably to produce mature siRNA, miRNA and shRNA, which can induce ribonucleic acid interference gene silencing effect (RNAi/PTGS - Associated gene silencing effects). Wherein, the cells can act on the intronic insert of the present invention to produce a single or multiple gene silencing effector, for example, the anti-green fluorescent protein precursor microRNA (pre-miRNA) is expressed in the zebra by the foreign body. On the fish, as shown in Figure 4A, two sets of mature microRNAs (mir-EGFP 282/300 and mir-EGFP280-302) were generated, suggesting that a single SpRNAi meson has more than one gene silencing effect. Gene-silencing effectors. Different spliced RNA effectors can produce a sense or antisense configuration. In some instances, the spliced ribonucleic acid can hybridize with some of the underlying gene transcription molecules to form a double-stranded ribonucleic acid to drive the ribonucleic acid interference effect. At the same time, expression of siRNA, miRNA and shRNA on the expression vector of the present invention can alleviate the suspicion that ribonucleic acid is rapidly degraded.

於不同實施例中,本發明進一步提供一產生互補正股微核醣核酸之反意微核醣核酸(antisense miRNA)之方法,此方法能於皮膚細胞中抑制標的微核醣核酸(target miRNA)。因為微核醣核酸(miRNA)會進行核醣核酸干擾靜默效應,而反意(antisense)miRNA具有中和正股微核醣核酸(sense miRNA)之基因靜默效應,也因此能使原本被微核醣核酸抑制之基因恢復功能。不像siRNA之雙股完全接合,反意(antisense)miRNA與正股(sense)miRNA之部分序列接合會產生錯接區域(mismatched base-paired region),此區域會被核醣核酸酶切除降解。而此錯接區域可能位於圓環區域(stem-arm)之中間位置或位於先驅微核醣核酸(pre-miRNA)之圓環結構。此外,於 siRNA上,此錯接區域已經被證實會抑制siRNA之基因靜默效應(Holen et al.(2002)Nucleic Acid Res.30:1757-1766;Krol et al.(2004)J.Biol.Chem. 279:42230-42239)。此現象可能與植物中內含子增進現象(intron-mediated enhancement phenomena in plant)有關,根據先前阿拉伯芥之研究,內含子之介子(intronic insert)在後轉錄修飾中扮演重要之角色使特定基因之表現提高或下降(Rose A.B.(2002)RNA 8:1444-1451;Stoutjesdijk et al.(2002)Plant Physiol.129:1723-1730)。內含子增進現象能藉由抑制用來抑制特定基因之微核醣核酸(miRNA)以恢復兩倍或到超過十倍標的特定基因表現。 In various embodiments, the invention further provides a method of producing an antisense miRNA of a complementary positive-stranded microribonucleic acid that inhibits a target miRNA in a skin cell. Because microRNAs (miRNAs) carry out ribonucleic acid interference silencing effects, antisense miRNAs have the gene silencing effect of neutralizing positive-sense miRNAs, thus enabling genes that were originally inhibited by microribonucleic acids. Restore function. Unlike the double-stranded siRNA, the antisense miRNA binds to a partial sequence of the sense miRNA, resulting in a mismatched base-paired region that is cleaved and degraded by ribonuclease. The misconnected region may be located in the middle of the stem-arm or in the ring structure of the precursor micro-ribonucleotide (pre-miRNA). Furthermore, on siRNA, this mismatched region has been shown to inhibit the gene silencing effect of siRNA (Holen et al . (2002) Nucleic Acid Res . 30 :1757-1766; Krol et al . (2004) J. Biol.Chem 279: 42230-42239). This phenomenon may be related to intron-mediated enhancement phenomena in plants. According to previous studies of Arabidopsis, intronic inserts play an important role in post-transcriptional modification. The performance is increased or decreased (Rose AB (2002) RNA 8 : 1444-1451; Stoutjesdijk et al . (2002) Plant Physiol . 129 : 1723-1730). The intron promotion phenomenon can be expressed by inhibiting a specific gene expression of a microRNA (miRNA) used to inhibit a specific gene to recover twice or more than ten times.

為了清楚地描述本發明,文中採用以下特定用語。然而,本發明並非僅限於這些特定用語。其應理解為每個特定元素均包含所有技術上的均等物,其可由相似的手段達成相近的目的。 In order to clearly describe the present invention, the following specific terms are employed herein. However, the invention is not limited to these specific terms. It should be understood that each particular element encompasses all technical equivalents that can be used for similar purposes by similar means.

「核苷酸(Nucleotide)」一詞在此意指一單分子之去氧核醣核酸(deoxyribonucleotide)(DNA)或核醣核酸(ribonucleotide)(RNA)分子,這些分子包含五碳醣(pentose)、磷酸根(phosphate)及鹼基(nitrogenous heterocyclic base)。此鹼基是經由醣苷鍵(glycosidic bond)與五碳醣聯接成一核(nucleoside),此核以五碳醣三端與五端之位置與磷酸根連接而係為核苷酸。 The term "nucleotide" is used herein to mean a single molecule of deoxyribonucleotide (DNA) or ribonucleotide (RNA) molecules containing pentose, phosphoric acid. Phosphate and nitrogenous heterocyclic base. This base is linked to a five-carbon sugar via a glycosidic bond to form a nucleoside, which is linked to a phosphate by a three-terminal and a five-terminal position of the five-carbon sugar.

「寡核苷酸(Oligonucleotide)」一詞在此意指一分子包含兩 個以上的DNA或RNA,較佳係超過三個。而其精確的尺寸係取決於其最佳功能狀態。寡核苷酸係能以化學合成、DNA複製、反轉錄及以上方式混合之方式。 The term "oligonucleotide" as used herein means that one molecule contains two More than one DNA or RNA, preferably more than three. Its exact size depends on its optimal functional status. Oligonucleotide lines can be synthesized by chemical synthesis, DNA replication, reverse transcription, and the like.

「核酸(Nucleic Acid)」一詞在此意指核苷酸(Nucleotide)之聚合體,可為單股或雙股。 The term "nucleic acid" as used herein refers to a polymer of nucleotides, either single or double.

「核苷酸相似物(Nucleotide Analog)」一詞在此意指一嘌呤(purine)或嘧啶(pyrimidine)核苷酸之結構與A、T、C、G或U不同但相似而能在核酸中取代正常核苷酸。 The term "Nucleotide Analog" as used herein means that the structure of a purine or pyrimidine nucleotide is different but similar to A, T, C, G or U and can be in a nucleic acid. Replace normal nucleotides.

「基因(Gene)」一詞在此意指一核酸之序列具有RNA或一多胜肽(蛋白質)之密碼,此基因係為RNA或DNA。 The term "gene" as used herein means that the sequence of a nucleic acid has the code for RNA or a multi-peptide (protein) which is RNA or DNA.

「鹼基對(Base Pair(bp))」一詞在此意指於雙股DNA分子中A與T或C與G之配對。在RNA中,U取代T與A配對。一般來說鹼基對係以氫鍵(hydrogen bonding)所連接。 The term "base pair (bp)" is used herein to mean the pairing of A with T or C with G in a double stranded DNA molecule. In RNA, U is substituted for T to pair with A. In general, base pairs are linked by hydrogen bonding.

「先驅訊息核醣核酸(Precursor messenger RNA(pre-mRNA))」一詞在此意指在真核細胞中藉由第二型RNA聚核酶(Pol-II)所產生之一基因之前驅RNA轉錄分子(primary ribo-nucleotide transcripts),此過程為轉錄(transcription),一先驅訊息核醣核酸序列包含五端非轉譯區域(5’-end untranslated region)、三端非轉譯區域(3’-end untranslated region)、外顯子(exon)及內含子(intron)。 The term "precursor messenger RNA (pre-mRNA)" as used herein refers to a gene-promoted RNA transcription in a eukaryotic cell produced by a second-type RNA polyzyme (Pol-II). Primary ribo-nucleotide transcripts, this process is transcription, a precursor message ribonucleic acid sequence contains a 5'-end untranslated region, a 3'-end untranslated region (3'-end untranslated region) ), exons and introns.

「內含子(intron)」一詞在此意指一部分之基因轉錄分子,此分子具有非轉譯區域之密碼。 The term "intron" is used herein to mean a portion of a gene transcription molecule that has a code for a non-translated region.

「外顯子(exon)」一詞在此意指一部分之基因轉錄分子,此分子具有轉譯區域之密碼。 The term "exon" is used herein to mean a portion of a gene transcription molecule that has a code for the translation region.

「訊息核醣核酸(mRNA)」一詞在此意指在內含子細胞內剪接機制除去後先驅訊息核醣核酸之外顯子組合而成具有蛋白轉譯密碼之mRNA。 The term "signal ribonucleic acid (mRNA)" as used herein refers to a combination of a precursor message ribonucleic acid exon of an intron cell that has a protein translational code.

「互補去氧核醣核酸(cDNA)」一詞在此意指一與mRNA序列互補之單股DNA,此cDNA無任何內含子序列。 The term "complementary deoxyribonucleic acid (cDNA)" is used herein to mean a single strand of DNA complementary to an mRNA sequence which lacks any intron sequences.

「正股核酸(sense)」一詞在此意指一核酸分子之序列順序與mRNA相同且其組成同源於此mRNA。此正股核酸構型係被標示為”+”、”s”或”sense”。 The term "sense" as used herein means that the sequence of a nucleic acid molecule is identical to the sequence of mRNA and its composition is homologous to the mRNA. This positive nucleic acid configuration is indicated as "+", "s" or "sense".

「反意核酸(antisense)」一詞在此意指一核酸分子之序列順序與該基因之正股(sense)互補。此反意核酸構型係被標示為”-”、”a”或”antisense”,例如”aDNA"或”aRNA”。 The term "antisense" as used herein means that the sequence of a nucleic acid molecule is complementary to the sense of the gene. This antisense nucleic acid configuration is designated "-", "a" or "antisense", such as "aDNA" or "aRNA".

「五端(5’-end)」一詞在此意指一連續核苷酸於五碳醣之五號碳之位置沒有以磷酸二酯鍵(phosphodiester bond)與下一個核苷酸之三號碳位至連接之端點謂之五端。 The term "5'-end" as used herein means that a contiguous nucleotide does not have a phosphodiester bond and a third nucleotide at the position of the fifth carbon of the five-carbon sugar. The carbon level to the end of the connection is called the five ends.

「三端(3’-end)」一詞在此意指一連續核苷酸於五碳醣之三號碳之位置沒有以磷酸二酯鍵(phosphodiester bond)與下一個核苷酸之五號碳位至連接之端點謂之三端。 The term "3'-end" as used herein means that a contiguous nucleotide does not have a phosphodiester bond and a fifth nucleotide at the position of the carbon of the fifth carbon sugar. The carbon level to the end of the connection is called the three ends.

「模板(Template)」一詞在此意指一能被核醣核酸聚合酶負制之核酸分子,根據核醣核酸聚合酶,模板係可為單股、雙股、部分雙股。合成之複製核酸互補於模版,其中至少雙股中之一 股互補或部分互補。 The term "template" is used herein to mean a nucleic acid molecule which can be negatively produced by a ribonucleic acid polymerase. According to the ribonucleic acid polymerase, the template system can be single-stranded, double-stranded, or partially double-stranded. The synthetic replication nucleic acid is complementary to the template, at least one of the double strands The shares are complementary or partially complementary.

「核酸模板(Nucleic Acid Template)」一詞在此意指一雙股DNA、雙股RNA、DNA-RNA雜交雙股或單股DNA或單股RNA。 The term "Nucleic Acid Template" is used herein to mean a double strand of DNA, double stranded RNA, DNA-RNA hybrid double stranded or single stranded DNA or single stranded RNA.

「一致(Conserved)」一詞在此意指一核苷酸序列是與原始序列一致。 The term "conserved" is used herein to mean that a nucleotide sequence is identical to the original sequence.

「互補(Complemetary or complementarity or complementation)」一詞在此意指互補核苷酸,例如序列”AGT”係互補於序列”TCA”或”TCU”。互補可以係兩股DNA之間、DNA與RNA之間、兩股RNA之間。互補能是部分或完全。部分互補係只有某些核苷酸鹼基配對;然而完全互補則是全部核苷酸鹼基皆配對。而互補之程度對於兩股雜交之效率重要影響。 The term "Complemetary or complementarity or complementation" is used herein to mean a complementary nucleotide, for example, the sequence "AGT" is complementary to the sequence "TCA" or "TCU". Complementation can be between two strands of DNA, between DNA and RNA, between two strands of RNA. Complementary energy is partial or complete. Partial complements have only certain nucleotide base pairings; however, full complementation means that all nucleotide bases are paired. The degree of complementation has an important impact on the efficiency of the two crosses.

「同源(homologous or homology)」一詞在此意指核酸序列與一基因或mRNA之序列相似。一核酸序列可能部分或完全與一特定基因或mRNA之序列互補,例如同源可能也表示一定比例之相似核苷酸超過全部之核苷酸數量。 The term "homologous or homology" as used herein means that the nucleic acid sequence is similar to the sequence of a gene or mRNA. A nucleic acid sequence may be partially or completely complementary to the sequence of a particular gene or mRNA, for example, homology may also indicate that a certain proportion of similar nucleotides exceeds the total number of nucleotides.

「互補鹼基(Complemetary base)」一詞在此意指當DNA或RNA形成雙股構型時,核苷酸之配對。 The term "Complemetary base" as used herein refers to the pairing of nucleotides when DNA or RNA forms a double-strand configuration.

「互補核苷酸序列(Complemetary Nucleotide Sequence)」一詞在此意指一單股RNA或DNA之核酸序列足夠專一互補於另一股,其中係以氫鍵力量來形成互補。 The term "Complemetary Nucleotide Sequence" as used herein means that the nucleic acid sequence of a single strand of RNA or DNA is sufficiently complementary to another strand, in which hydrogen bonding forces are used to form a complement.

「雜交(Hybirdize and Hybridization)」一詞在此意指核苷酸序列經由鹼基互補所形成雙股的情況。而雜交有時在引子(primer)對特定核酸序列進行互補後可提供DNA聚合酶進行DNA複製初始步驟。 The term "hybridization" (Hybirdize and Hybridization) is used herein to mean the case where a nucleotide sequence forms a double strand via base complementation. Hybridization, in some cases, provides a DNA polymerase for the initial step of DNA replication after the primer complements a particular nucleic acid sequence.

「核醣核酸干擾(RNA interference(RNAi))」一詞在此意指在真核細胞中一經由RNA小片段(例如,微核醣核酸(miRNA)及siRNA)啟動之後轉錄基因靜默機制。這些RNA小片段可當成基因靜默效應物進而干擾與其互補之細胞內特定基因轉錄分子。 The term "RNA interference (RNAi)" as used herein refers to a mechanism of transcriptional gene silencing following initiation by eukaryotic cells via small RNA fragments (eg, microRNAs (miRNAs) and siRNAs). These small RNA fragments can be used as gene silencing effectors to interfere with specific gene transcription molecules within the cell to which they are complementary.

「微核醣核酸(MicroRNA(miRNA))」一詞在此意指一能與特定基因轉錄分子互補之單股核醣核酸(RNA)。miRNA通常係17到27個核苷酸之間,並能根據miRNA與mRNA之間的互補直接降解細胞中之訊息核醣核酸或抑制特定基因之蛋白轉譯。細胞本身miRNA能在所有真核細胞中發現,當成一防衛病毒感染之重要機制。 The term "microRNA (miRNA)" as used herein means a single-stranded ribonucleic acid (RNA) that is complementary to a particular gene transcription molecule. miRNAs are typically between 17 and 27 nucleotides and are capable of directly degrading the message ribonucleic acid in a cell or inhibiting the translation of a particular gene based on the complementarity between the miRNA and the mRNA. The miRNA of the cell itself can be found in all eukaryotic cells as an important mechanism for preventing viral infection.

「先驅微核醣核酸(Pre-miRNA)」一詞在此意指一具有小夾結構之單股核醣核酸,此Pre-miRNA包含圓環結構區域(stem-arm and stem-loop region)用來與RNaseIII內切酶交互作用而產生一基因靜默效應物(gene silencing effector)。此Pre-miRNA能與特定基因轉錄分子形成完全或部分互補。 The term "pre-miRNA" is used herein to mean a single-stranded ribonucleic acid with a small sandwich structure containing a stem-arm and stem-loop region. The RNaseIII endonuclease interacts to produce a gene silencing effector. This Pre-miRNA can form a complete or partial complement to a specific gene transcription molecule.

「小夾核醣核酸(small or short hairpin RNA(shRNA))」一詞在此意指一具有一部分或完全互補之圓環結構序列之一單股 核醣核酸。許多微核醣核酸係自shRNA先驅物所衍生,此shRNA先驅物又稱為先驅微核醣核酸(pre-miRNA)。 The term "small or short hairpin RNA (shRNA)" as used herein means a single strand of a ring structure sequence that has a partial or complete complementarity. Ribonucleic acid. Many microRNAs are derived from shRNA precursors, also known as precursor microRNAs (pre-miRNAs).

「載體(Vector)」一詞在此意指一具有攜帶以表現特定遺傳物質之重組核酸分子。一般來說,此重組核酸分子係連接成一環型。此載體係能於細胞中自動複製。其中一種形式之載體為離合染色小體(episome)能於染色體外自我複製。其中具有表現基因蛋白能力者為表現載體(expression vector)。 The term "Vector" is used herein to mean a recombinant nucleic acid molecule that carries a specific genetic material. Generally, the recombinant nucleic acid molecules are linked into a single loop. This vector is capable of automatic replication in cells. One form of vector is that the episomes can replicate extrachromosomally. Among them, those having the ability to express a gene protein are expression vectors.

「作用子(Cistron)」一詞在此意指一核苷酸序列具有胺基酸轉譯能力,且序列上及下端各有DNA表現控制區。 The term "Cistron" is used herein to mean a nucleotide sequence having amino acid translation ability and a DNA expression control region at the upper and lower ends of the sequence.

「啟動子(Promoter)」一詞在此意指一能被聚合酶辨認之核酸而能啟動轉錄。 The term "promoter" is used herein to mean a nucleic acid that is recognized by a polymerase to initiate transcription.

「抗體(Antibody)」一詞在此意指一具有與一特定胺基酸序列交互作用之多胜肽或蛋白分子。 The term "antibody" as used herein means a multi-peptide or protein molecule having an interaction with a particular amino acid sequence.

本發明係關於一種方法及成分,該方法藉由內含子之核醣核酸使皮膚細胞遺傳特性改善。這種改善是藉由一內含子之基因靜默機制而產生,重點在於此機制係藉由一能剪接之內含子(命名為SpRNAi)所誘發。該SpRNAi能攜帶內含子之介子經由核醣核酸之剪接與處理之機制而釋出該內含子之介子並經由RNAi/PTGS靜默效應以互補方式抑制特定基因。一般來說,如圖4到7所示,當重組基因利用化學方式或脂質體(liposome)轉染或病毒感染進入皮膚細胞後,該內含子之介子(intronic insert)經由第二型核醣核酸聚合酶系統轉錄並由剪接體 (spliceosome)之剪接與NMD系統處理之機制作用後而釋出。釋出後,SpRNAi之內含子之介子(intronic insert)形成一套馬索核醣核酸(lariat RNA)並進一步處理成基因靜默效應物(gene silencing effectors),包含短暫時核醣核酸(short-temporary RNA(stRNA))、反意核醣核酸(antisense RNA)、siRNA(siRNA)、小夾核醣核酸(shRNA)、微核醣核酸(miRNA)、核醣酵素核醣核酸(ribozyme RNA)、Piwi-interacting RNA(piRNA)及這些核醣核酸之先驅物與衍生物以及以上核醣核酸混合之核醣核酸選其一。之後,這些基因靜默效應物將經由RISC複合體而進行降解它們之標的基因轉錄分子或抑制標的基因之蛋白轉譯。 The present invention relates to a method and composition for improving the genetic properties of skin cells by the ribonucleic acid of an intron. This improvement is caused by a gene silencing mechanism of an intron, with an emphasis on this mechanism being induced by a splicing intron (named SpRNAi ). The SpRNAi can carry an intron meson to release the intron of the intron via a mechanism of splicing and processing of ribonucleic acid and inhibit the specific gene in a complementary manner via the RNAi/PTGS silent effect. Generally, as shown in Figures 4 to 7, when the recombinant gene is chemically or lipofected or virally infected into the skin cells, the intronic insert is passed through the second type of ribonucleic acid. The polymerase system is transcribed and released by the splicing of the spliceosome and the mechanism of treatment by the NMD system. After release, the intronic insert of SpRNAi forms a set of lariat RNA and is further processed into gene silencing effectors, including short-temporary RNA. (stRNA)), antisense RNA, siRNA (siRNA), small ribonucleic acid (shRNA), microRNA (miRNA), ribozyme RNA, Piwi-interacting RNA (piRNA) And one of the precursors and derivatives of these ribonucleic acids and the ribonucleic acid mixed with the above ribonucleic acids. These gene silencing effectors will then undergo degradation of their target gene transcriptional molecules or protein translation of the target gene via the RISC complex.

為了模擬細胞內pre-mRNA剪接及處理機制,我們使用細胞內剪接體與NMD系統催化內含子移除並處理SpRNAi-RGFP表現系統。經由一連串細胞內剪接體作用後SpRNAi被釋出以進一步形成基因靜默效應物(gene silencing effector)。將剪接體系統辨識併入SpRNAi之方法分別於實施例一及二揭露。 To mimic intracellular pre-mRNA splicing and processing mechanisms, we used intracellular splices and the NMD system to catalyze intron removal and processing of the SpRNAi-RGFP expression system. SpRNAi is released via a cascade of intracellular splices to further form a gene silencing effector. Methods for incorporating splice system identification into SpRNAi are disclosed in Examples 1 and 2, respectively.

設計、建構及評估能產生內含子之靜默效應物之第二型轉錄聚合酶之紅色螢光蛋白(SpRNAi-RGFP)之表現系統Design, construction, and evaluation of a red fluorescent protein ( SRNARNA-RGFP ) expression system that produces a second type of transcriptional polymerase that is a silent effector of introns

本發明使用第二型轉錄聚合酶(Pol-II)之紅色螢光蛋白之表現載體系統(SpRNAi-RGFP expression system)已經被證實功效,此SpRNAi-RGFP表現系統具有能夠產生基因靜默效應物 (gene silencing effector)之SpRNAi,如圖3A與3B所示,這些靜默效應物有miRNA與shRNA。這些靜默效應物可以經由一連串細胞內剪接體及NMD系統作用後被釋出。然而在其他實施例中,經由同樣之精神與原理,由第一型核醣核酸聚合酶系統所轉錄之先驅核醣體核醣核酸(ribosomal precursor RNA(pre-rRNA))也可以產生功能相同之基因靜默效應物(gene silencing effector)。此外能用來產生SpRNAi之核醣核酸轉錄分子(如同基因重組核苷酸之前驅核醣核酸)包含訊息核醣核酸(mRNA)、異質核核醣核酸(hnRNA)、核醣體核醣核酸(rRNA)、轉介核醣核酸tRNA、snoRNA、小胞核核醣核酸snRNA、先驅微核醣核酸(pre-miRNA)、病毒核醣核酸(viral RNA)以及以上核醣核酸之衍生物及先驅物。 The present invention is the use of a second transcription polymerase (Pol-II) of the red fluorescent protein expression vector system (SpRNAi-RGFP expression system) have been demonstrated efficacy, the SpRNAi-RGFP expression system capable of producing gene silencing effectors (gene silencing effector) of SpRNAi, as shown in FIG. 3A and 3B, there are such silent effector miRNA and shRNA. These silent effectors can be released via a cascade of intracellular splices and the NMD system. In other embodiments, however, the ribosomal precursor RNA (pre-rRNA) transcribed by the first-type ribonucleic acid polymerase system can also produce a functionally identical gene silencing effect via the same spirit and principle. Gene silencing effector. In addition, a ribonucleic acid transcription molecule (such as a genetically modified nucleotide precursor ribonucleic acid) that can be used to generate SpRNAi contains a message ribonucleic acid (mRNA), a heteronuclear ribonucleic acid (hnRNA), a ribosome ribonucleic acid (rRNA), a trans-ribose ribose. Nucleic acid tRNA, snoRNA, small nuclear RNA snRNA, precursor microribonucleic acid (pre-miRNA), viral ribonucleic acid (viral RNA) and derivatives and precursors of the above ribonucleic acids.

如實施例1到2及圖3A所示,將SpRNAi利用Drall限制酶切位接上一紅色螢光蛋白(red fluorescent protein,RGFP)基因(來自Heteractis crispa)而形成一基因重組之含紅色螢光蛋白之SpRNAi(SpRNAi-RGFP)基因結構,因為SpRNAi之嵌入造成紅色螢光蛋白無法正常表現,不過等內含子被剪接後,此紅色螢光蛋白就能恢復正常表現,我們可以利用紅色螢光波長570nm所偵測到之紅色螢光蛋白表現量來判定內含子之小夾核醣核酸(shRNA)/微核醣核酸(miRNA)所釋出的量。SpRNAi-RGFP構建是基於pre-mRNA之結構特性,SpRNAi(人造內含子)被剪接體辨識之主要部分包含五端剪接處、分支點 區、多嘧啶區(用來與剪接體交互作用)以及三端剪接處。如圖3B所示,本發明之具有靜默效應物之SpRNAi(人造內含子)包含五端剪接處、內含子之介子(也就是先驅微核醣核酸介子)、分支點區、多嘧啶區及三端剪接處。此外一些轉譯終止子係位於靠近SpRNAi之三端剪接處。 As shown in Examples 1 to 2 and Figure 3A, SpRNAi was ligated with the Drall restriction enzyme to ligature a red fluorescent protein (RGFP) gene (from Heteractis crispa ) to form a recombination-containing red fluorescent The structure of the SpRNAi ( SpRNAi-RGFP ) gene, the red fluorescent protein can not be expressed normally due to the insertion of SpRNAi , but after the intron is spliced, the red fluorescent protein can return to normal performance, we can use red fluorescent The amount of red fluorescent protein detected at a wavelength of 570 nm is used to determine the amount released by the small ribonucleic acid (shRNA)/microribonucleic acid (miRNA) of the intron. SpRNAi-RGFP construction is based on the structural properties of pre-mRNA, and the major part of SpRNAi (artificial intron) recognition by splices includes a five-terminal splicing site, a branching region, a polypyrimidine region (used to interact with the splice), and Three-end splicing. As shown in FIG. 3B, the SpRNAi (artificial intron) having a silent effector of the present invention comprises a five-terminal splicing site, an intron meson (ie, a precursor microribonucleic acid meson), a branching point region, a polypyrimidine region, and Three-end splicing. In addition, some translation terminators are located near the three-terminal splicing site of SpRNAi .

一般來說,五端剪接處係一核苷酸序列,該序列同源於5’-GTAAGAGK-3’(SEQ.ID.NO.3)或是GU(A/G)AGU序列(例如,5’-GTAAGAGGAT-3’、5’-GTAAGAGT-3’、5’-GTAGAGT-3’及5’-GTAAGT-3’)。三端剪接處係同源於GWKSCYRCAG(SEQ.ID.NO.4)或CT(A/G)A(C/T)NG序列(例如,5’-GATATCCTGCAG-3’、5’-GGCTGCAG-3’、5’-CCACAG-3’)。此外,一分支點序列係位於五端與三端剪接處,該分支點區位於一核苷酸序列同源於5’-TACTWAY-3’(SEQ.ID.NO.5)(例如,5’-TACTAAC-3’及5’-TACTTAT-3’),該分支點區包含一分支點,而該分支點係一腺核苷(adenosine,A)能形成一套馬索(lariat)結構。此外該多嘧啶區位於該分支點區與三端剪接處之間,其中該多嘧啶區是一具有許多胸腺嘧啶(Thymine)與胞嘧啶(Cytosine)之核苷酸序列,該多嘧啶區之核苷酸序列同源於5’-(TY)m(C/-)(T)nS(C/-)-3’(SEQ.ID.NO.6)與5’-(TC)nNCTAG(G/-)-3’(SEQ.ID.NO.7)。其中,”m”與”n”係指大於等於一之多重複序列,較佳m之序列數是一到三之間而n之序列數是七到十二之間。”-“係指無任何核苷酸。全部這些內含子是藉由 一些連接核苷酸來連接,基於37CFR1.822規定,W係指腺嘌呤(adenine(A))或胸腺嘧啶(thymine(T))/尿嘧啶(uracil(U)),K係指鳥嘌呤(guanine(G))或胸腺嘧啶/尿嘧啶,S係指胞嘧啶或鳥嘌呤,Y係指胞嘧啶或胸腺嘧啶/尿嘧啶,R係指腺嘌呤或鳥嘌呤以及N係指腺嘌呤、胞嘧啶、鳥嘌呤或胸腺嘧啶/尿嘧啶及其他。對於全部之剪接體辨識區域,胸腺核苷酸(deoxythymidine)是被尿核酸(uridine)取代。 Generally, the five-terminal splicing is a nucleotide sequence homologous to 5'-GTAAGAGK-3' (SEQ.ID.NO.3) or GU(A/G)AGU sequence (eg, 5 '-GTAAGAGGAT-3', 5'-GTAAGAGT-3', 5'-GTAGAGT-3' and 5'-GTAAGT-3'). The three-terminal splicing is homologous to the GWKSCYRCAG (SEQ.ID.NO.4) or CT(A/G)A(C/T)NG sequence (eg, 5'-GATATCCTGCAG-3', 5'-GGCTGCAG-3 ', 5'-CCACAG-3'). In addition, a branch point sequence is located at the five-terminal and three-terminal splicing, and the branch point region is located in a nucleotide sequence homologous to 5'-TACTWAY-3' (SEQ. ID. NO. 5) (eg, 5' -TACTAAC-3' and 5'-TACTTAT-3'), the branch point region contains a branch point, and the branch point is an adenosine (A) capable of forming a set of lariat structures. In addition, the polypyrimidine region is located between the branching point region and the three-terminal splicing region, wherein the polypyrimidine region is a nucleotide sequence having a plurality of thymines (cytosine) and a nucleus of the polypyrimidine region. The nucleotide sequence is homologous to 5'-(TY)m(C/-)(T)nS(C/-)-3' (SEQ.ID.NO.6) and 5'-(TC)nNCTAG(G/ -)-3' (SEQ. ID. NO. 7). Wherein, "m" and "n" mean a repeating sequence of one or more, preferably the number of sequences of m is between one and three and the number of sequences of n is between seven and twelve. "-" means no nucleotides. All these introns are Some connect nucleotides to connect, based on 37 CFR 1.822, W refers to adenine (A) or thymine (T) / uracil (U), and K refers to guanine ( Guanine (G)) or thymine/uracil, S means cytosine or guanine, Y means cytosine or thymine/uracil, R means adenine or guanine, and N means adenine or cytosine , guanine or thymine/uracil and others. For all splice identification regions, the deoxythymidine is replaced by uridine.

為了確定SpRNAi之介子(insert)於內含子之介子之位置,由於該位置由限制酶切位所決定,其中限制酶係自AatII、AccI、AflII/III、AgeI、ApaI/LI、AseI、Asp718I、BamHI、BbeI、BclI/II、BglII、BsmI、Bsp120I、BspHI/LU11I/120I、BsrI/BI/GI、BssHII/SI、BstBI/U1/XI、ClaI、Csp6I、DpnI、DraI/II、EagI、Ecl136II、EcoRI/RII/47III、EheI、FspI、HaeIII、HhaI、HinPI、HindIII、HinfI、HpaI/II、KasI、KpnI、MaeII/III、MfeI、MluI、MscI、MseI、NaeI、NarI、NcoI、NdeI、NgoMI、NotI、NruI、NsiI、PmlI、Ppu10I、PstI、PvuI/II、RsaI、SacI/II、SalI、Sau3AI、SmaI、SnaBI、SphI、SspI、StuI、TaiI、TaqI、XbaI、XhoI、XmaI以及以上限制酶混合之限制酶選其一。其中這些內含子之介子(intronic insert)是一DNA模板,此模板包含套馬索核醣核酸、短暫時(short-temporary)RNA(stRNA)、反意核醣核酸(antisense RNA)、siRNA(siRNA)、小夾核醣核酸(shRNA)、微核醣核酸 (miRNA)、Piwi-interacting RNA(piRNA)、核糖酵素及這些核醣核酸之先驅物以及上述核醣核酸之混合物。 In order to determine the position of the interferon of the SpRNAi in the intron, since the position is determined by the restriction enzyme cleavage, the restriction enzymes are from AatII, AccI, AflII/III, AgeI, ApaI/LI, AseI, Asp718I. , BamHI, BbeI, BclI/II, BglII, BsmI, Bsp120I, BspHI/LU11I/120I, BsrI/BI/GI, BssHII/SI, BstBI/U1/XI, ClaI, Csp6I, DpnI, DraI/II, EagI, Ecl136II , EcoRI/RII/47III, EheI, FspI, HaeIII, HhaI, HinPI, HindIII, HinfI, HpaI/II, KasI, KpnI, MaeII/III, MfeI, MluI, MscI, MseI, NaeI, NarI, NcoI, NdeI, NgoMI , NotI, NruI, NsiI, PmlI, Ppu10I, PstI, PvuI/II, RsaI, SacI/II, SalI, Sau3AI, SmaI, SnaBI, SphI, SspI, StuI, TaiI, TaqI, XbaI, XhoI, XmaI and the above restriction enzymes One of the mixed restriction enzymes is selected. The intronic insert is a DNA template comprising a set of serotonin, a short-temporary RNA (stRNA), an antisense RNA, and an siRNA (siRNA). , small ribonucleic acid (shRNA), microribonucleic acid (miRNA), Piwi-interacting RNA (piRNA), ribozyme and precursors of these ribonucleic acids and mixtures of the above ribonucleic acids.

為了基因傳送之方便以誘發特定細胞活化,本發明之較佳之基因重組SpRNAi被併入表現載體,該載體係選自質體(plasmid)、柯斯盾粒(cosmid)、噬菌粒(phagmid)、酵母人工染色體(yeast artificial chromosome)、轉殖基因(transgene)、轉位子(transposon)、反轉位子(retrotransposon)、跳躍基因、病毒載體以及以上載體混合之載體。該載體藉由基因轉染方法進入特定細胞或組織,這些基因轉染方法包含脂質體轉染法(liposomal transfection)、化學轉染法(chemical transfection)、去氧核醣核酸接合(DNA ligation)、插入轉殖基因、化學轉形法(chemical transformation)、電穿孔法(electroporation)、同源基因合併交換(homologous recombination)、轉位子傳遞法(transposon insertion)、跳躍基因轉染法(jumping gene transfection)、病毒感染法(viral infection)、反轉類病毒感染、微注射法(micro-injection)、基因槍法(gene-gun penetration)以及以上方法混合之方法。此外,此載體進一步包含至少一病毒或第二型核醣核酸聚合酶(Pol-II)之啟動子以表現SpRNAi-RGFP、一Kozak轉譯起始處(Kozak consensus translation initiation site)以增加在真核細胞中之轉譯效率、一多重SV40之多腺苷酸化作用信號(polyadenylation signals)於SpRNAi-RGFP之下游區域、一pUC複製起始子(origin of replication)、至少兩個限制酶切位用於併合SpRNAi-RGFP入載體、一於哺乳細胞中之任意(optional)SV40複製起始子用於表達SV40 T抗原、一於原核細胞具有表現至少一抗抗生素基因(antibiotic resistance gene)之SV40早期(early)啟動子,以上元件併入SpRNAi-RGFP載體之位置由限制酶切位所決定。上述載體之病毒啟動子包含細胞巨大病毒啟動子(cytomegalovirus,CMV promoter)、逆轉錄病毒長末端序列啟動子(retrovirus long-terminal region(LTR)promoter)、B型肝炎病毒啟動子(hepatitis B virus,HBV)、腺病毒啟動子(adenovirus AMV promoter)、腺相關病毒啟動子(adeno-associated virus(AAV)promoter)以及植物相關花葉病毒(plant-associated mosaic virus)啟動子。其中限制酶係自AatII、AccI、AflII/III、AgeI、ApaI/LI、AseI、Asp718I、BamHI、BbeI、BclI/II、BglII、BsmI、Bsp120I、BspHI/LU111/120I、BsrI/BI/GI、BssHII/SI、BstBI/U1/XI、ClaI、Csp6I、DpnI、DraI/II、EagI、Ecl136II、EcoRI/RII/47III、EheI、FspI、HaeIII、HhaI、HinPI、HindIII、HinfI、HpaI/II、KasI、KpnI、MaeII/III、MfeI、MluI、MscI、MseI、NaeI、NarI、NcoI、NdeI、NgoMI、NotI、NruI、NsiI、PmlI、Ppu10I、PstI、PvuI/II、RsaI、SacI/II、SalI、Sau3AI、SmaI、SnaBI、SphI、SspI、StuI、TaiI、TaqI、XbaI、XhoI、XmaI以及以上限制酶混合之限制酶選其一。其中,該抗抗生素之基因之表達係當成一用於篩選特定細胞之 指標,而該抗抗生素基因係可對抗包含青黴素G(penicillin G)、安比西林(ampicillin)、新黴素(neomycin)、巴龍黴素(paromycin)、康黴素(kanamycin)、鏈黴素(streptomycin)、紅黴素(erythromycin)、斯派克黴素(spectromycin)、霍火黴素(phophomycin)、四環素(tetracycline)、利福黴素(rifapicin)、兩性黴素B(amphotericin B)、健他黴素(gentamycin)、氯黴素(chloramphenicol)、頭孢黴素(cephalothin)、泰黴素(tylosin)、G418以及以上抗生素混合之抗生素。 For the convenience of gene delivery to induce specific cell activation, the preferred genetically recombinant SpRNAi of the present invention is incorporated into a expression vector selected from the group consisting of a plasmid, a cosmid, and a phagmid. , a yeast artificial chromosome, a transgene, a transposon, a retrotransposon, a skipping gene, a viral vector, and a vector in which the above vectors are mixed. The vector is introduced into a specific cell or tissue by gene transfection methods, including liposomal transfection, chemical transfection, DNA ligation, and insertion. Transgenic genes, chemical transformation, electroporation, homologous recombination, transposon insertion, jumping gene transfection, Viral infection, reversed viral infection, micro-injection, gene-gun penetration, and a combination of the above methods. In addition, the vector further comprises a promoter of at least one virus or a second type ribonucleic acid polymerase (Pol-II) to express SpRNAi-RGFP and a Kozak consensus translation initiation site to increase in eukaryotic cells. Translation efficiency, a multiple SV40 polyadenylation signal in the downstream region of SpRNAi-RGFP , a pUC origin of replication, at least two restriction enzyme cleavage positions for confluence SpRNAi-RGFP into the vector, an optional SV40 replication initiator in a mammalian cell for expression of the SV40 T antigen, and an SV40 early (early) which exhibits at least one antibiotic resistance gene in prokaryotic cells. Promoter, the location of the above elements incorporated into the SpRNAi-RGFP vector is determined by the restriction enzyme cleavage site. The viral promoter of the above vector comprises a cytomegalovirus (CMV promoter), a retrovirus long-terminal region (LTR) promoter, and a hepatitis B virus promoter (hepatitis B virus). HBV), adenovirus AMV promoter, adeno-associated virus (AAV) promoter, and plant-associated mosaic virus promoter. The restriction enzymes are from AatII, AccI, AflII/III, AgeI, ApaI/LI, AseI, Asp718I, BamHI, BbeI, BclI/II, BglII, BsmI, Bsp120I, BspHI/LU111/120I, BsrI/BI/GI, BssHII /SI, BstBI/U1/XI, ClaI, Csp6I, DpnI, DraI/II, EagI, Ecl136II, EcoRI/RII/47III, EheI, FspI, HaeIII, HhaI, HinPI, HindIII, HinfI, HpaI/II, KasI, KpnI , MaeII/III, MfeI, MluI, MscI, MseI, NaeI, NarI, NcoI, NdeI, NgoMI, NotI, NruI, NsiI, PmlI, Ppu10I, PstI, PvuI/II, RsaI, SacI/II, SalI, Sau3AI, SmaI One of the restriction enzymes of SnaBI, SphI, SspI, StuI, TaiI, TaqI, XbaI, XhoI, XmaI and the above restriction enzymes is selected. Wherein, the expression of the anti-antibiotic gene is used as an indicator for screening a specific cell, and the anti-antibiotic gene line can be resistant to penicillin G (penicillin G), ampicillin, neomycin, and barley. Paromycin, kanamycin, streptomycin, erythromycin, spectromycin, phophomycin, tetracycline, Combination of rifapicin, amphotericin B, gentamycin, chloramphenicol, cephalothin, tylosin, G418 and the above antibiotics Antibiotics.

SpRNAi-RGFP載體已經於(Tg(actin-GAL4:UAS-gfp))株之斑馬魚體內測試過而可抑制綠色螢光蛋白表達,如實施例三與圖3C所示,抗綠色螢光蛋白之miRNA經由脂質體轉染SpRNAi-RGFP組(line4)顯示出很顯著之綠色螢光蛋白抑制現象(約大於80%之蛋白抑制),然而於其他實驗組與對照組並無任何效果被偵測到;這些實驗組與對照組依序(由左到右)係1、控制組(blank vector control,Ctl)。2、針對愛滋病病毒蛋白(HIV-p24)之先驅微核醣核酸(pre-miRNA)的對照組。3、針對反意綠色螢光蛋白且無小夾結構(antisense EGFP insert without the hairpin loop structure)之anti組以及5、反轉先驅微核醣核酸序列之miR*組;該反轉先驅微核醣核酸序列組係完全互補於抗綠色螢光蛋白之先驅微核醣核酸(anti-EGFP pre-miRNA,miR*)。於非針對基因,例如紅色螢光蛋白以及肌動蛋白(actin)並無靜默現象發生,表示SpRNAi 之微核醣核酸介入之核醣核酸干擾係具高度專一性。如圖3D顯示北方墨點法(Northern bolting)分析資料顯示成熟之微核醣核酸(miRNA)(也就是內含子之微核醣核酸)只有在具有內含子之抗綠色螢光蛋白先驅微核醣核酸之紅色螢光蛋白載體組形成出來(中間第二列),此現象並無在不具有內含子之紅色螢光蛋白組顯現(左邊第一列),此時紅色螢光蛋白係可以正常被連接起來形成一成熟核醣核酸以進行表達。 The SpRNAi-RGFP vector has been tested in zebrafish (Tg (actin-GAL4: UAS-gfp)) strain to inhibit green fluorescent protein expression, as shown in Example 3 and Figure 3C, anti-green fluorescent protein The miRNA transfected into the SpRNAi-RGFP group (line4) by liposome showed a significant inhibition of green fluorescent protein (about 80% protein inhibition), but no effect was detected in other experimental groups and control groups. To; these experimental groups and the control group were sequentially (left to right) 1 and control group (blank vector control, Ctl). 2. A control group for the pro-microRNA (pre-miRNA) of the HIV- infected protein ( HIV-p24 ). 3. The anti group of the antisense EGFP insert without the hairpin loop structure and the miR* group of the inverted precursor microRNA sequence; the inverted precursor microRNA sequence The lineage is fully complementary to the anti- EGFP pre-miRNA (miR*) against green fluorescent protein. There is no silent phenomenon in non-targeted genes, such as red fluorescent protein and actin, indicating that the RNA interference of the RNA interference of SpRNAi is highly specific. Figure 3D shows Northern blotting analysis showing mature microRNAs (also known as intron microRNAs) only in anti-green fluorescent protein precursor microRNAs with introns The red fluorescent protein carrier group was formed (the second column in the middle). This phenomenon was not observed in the red fluorescent protein group without introns (the first column on the left), and the red fluorescent protein system could be normally They are joined to form a mature ribonucleic acid for expression.

評估內含子之微核醣核酸(miRNA)結構於細胞內之效率Assessing the efficiency of intron microRNAs (miRNAs) in cells

之前實驗已經確定內含子之微核醣核酸(intronic miRNA)能於細胞內產生基因靜默效應。為了進一步評估內含子之微核醣核酸之基因靜默效應之效率以及決定較佳微核醣核酸之結構,因此選擇斑馬魚做為實驗材料,進一步了解RISC複合體對於何種微核醣核酸結構有所偏好。 Previous experiments have determined that intronic miRNAs of introns can produce gene silencing effects in cells. In order to further evaluate the efficiency of the gene silencing effect of the microRNA in the intron and determine the structure of the preferred microribonucleic acid, zebrafish was selected as the experimental material to further understand the preference of the RISC complex for the microRNA structure. .

在實驗中發現pre-miRNA之圓環結構(stem-loop)決定RISC複合體與miRNA之組合,此組合之一RISC複合體與siRNA-RISC組合之複合體不同(Lin et.al.(2005)Gene 356:32-38)。siRNA之雙股於siRNA-RISC複合體中扮演重要之角色,雙股siRNA只有一股被併入於RISC複合體中,此現象是由於siRNA雙股五端之鹼基對之動態熱穩定性所決定。基於此siRNA模式,miRNA與其互補之miRNA(又稱miRNA*)之雙股之互補被認為係組成RISC複合體關鍵性之一步。假如此模式係正確的話,將無任何偏好特定一股之現象出現,然而, 實驗發現intronic pre-miRNA之圓環結構對於RISC複合體的組成扮演重要角色。 In the experiment, it was found that the stem-loop of pre-miRNA determines the combination of RISC complex and miRNA. One of the combinations of RISC complex is different from the complex of siRNA-RISC combination (Lin et.al. (2005) Gene 356 : 32-38). The double strand of siRNA plays an important role in the siRNA-RISC complex, and only one strand of the double stranded siRNA is incorporated into the RISC complex. This phenomenon is due to the dynamic thermal stability of the siRNA double-stranded base pair. Decide. Based on this siRNA pattern, the complementation of the miRNAs with their complementary miRNAs (also known as miRNA*s) is considered to be one of the key steps in the formation of the RISC complex. If the model is correct, there will be no preference for a particular one. However, experiments have found that the ring structure of the intronic pre-miRNA plays an important role in the composition of the RISC complex.

在實施例1與2中,利用表現anti-EGFP miRNA之SpRNAi-RGFP載體以及miRNA*-stemloop-miRNA[1]以及miRNA-stemloop-miRNA*[2](miRNA*代表係與成熟微核醣核酸序列互補之微核醣核酸)這兩個不同之微核醣核酸(miRNA)之內含子之介子(intronic insert)表現載體,此不同表現介子係自DNA合成機器中合成並個別插入事先準備好之SpRNAi-RGFP載體中。這兩組載體包含相同之雙股圓環結構(stem-loop structure),該圓環結構能對EGFP基因第280到第302之核苷酸序列進行靜默效應。因為內含子之介子(intronic insert)係被PvuIMluI限制酶切位所連接,因此該介子能輕易被許多其他不同抗基因介子(例如,anti-EGFP,anti-Tyr或anti-Hyal)所取代。藉由此一特定應用,此內含子之微核醣核酸(intronic insert)表現系統能提供一於細胞內發展之miRNA遺傳應用之工具。 In Examples 1 and 2, the SpRNAi-RGFP vector expressing the anti- EGFP miRNA and the miRNA*-stemloop-miRNA [1] and the miRNA-stemloop-miRNA* [2] (miRNA* representative line and mature microribonucleic acid sequence were used. Complementary microRNAs) Intronic insert expression vectors of these two different microRNAs (miRNAs), which differ in the expression of mesons from DNA synthesis machinery and the insertion of previously prepared SpRNAi- In the RGFP vector. The two sets of vectors contain the same double-loop structure which is capable of silently effecting the nucleotide sequences 280 to 302 of the EGFP gene. Because the intronic insert is linked by the PvuI and MluI restriction enzyme cleavage sites, the meson can be easily manipulated by many other different anti-gene mesons (eg, anti- EGFP , anti-Tyr or anti-Hyal). Replace. By this particular application, the intronic insert expression system of this intron provides a tool for miRNA genetic applications for intracellular development.

為了決定何種pre-miRNA結構有所偏好,經由mirVana微核醣核酸分離管柱(Ambion,Austin,TX)中之latex beads將具有斑馬魚中靜默效應潛力之微核醣核酸沉澱下來。該miR-EGFP(280-302)被證實能對EGFP基因第280到第302之核苷酸序列進行靜默效應,如圖4A所示。因為此有效之miRNA係只有在轉染斑馬魚之miRNA-stemloop-miRNA*[2] (也就是圖4A下方所標示之環型表現載體)被發現有效,因此推測RISC複合體對miRNA-stemloop-miRNA*[2]有結構上之偏好,如圖4B所示,利用經由肌動蛋白(beta-actin)啟動子表達之斑馬魚(Tg(actin-GAL4:UAS-gfp))來進行實驗以展現視覺上標的基因靜默效應與miRNA表現之關係,此斑馬魚會一直於各類細胞中表達綠色螢光蛋白。於此斑馬魚轉染SpRNAi-RGFP載體並表達一可當為指標蛋白之紅色螢光蛋白。利用FuGene cationic liposomal reagent(Roche,In)轉染SpRNAi-RGFP載體進入斑馬魚後,發現所有載體能在轉染24小時候完全進入兩周大之斑馬魚幼魚中,除了骨骼及魚鱗部分以外。 To determine which pre-miRNA structure is preferred, the microribonucleic acid with the potential for silent effects in zebrafish is precipitated via latex beads in a mirVana microribonucleic acid separation column (Ambion, Austin, TX). The miR-EGFP (280-302) was shown to exert a silent effect on the nucleotide sequence 280 to 302 of the EGFP gene, as shown in Fig. 4A. Because this potent miRNA is only found to be effective in transfecting zebrafish miRNA-stemloop-miRNA*[2] (that is, the circular expression vector indicated below Figure 4A), it is speculated that the RISC complex is miRNA-stemloop- miRNA*[2] has a structural preference, as shown in Figure 4B, using zebrafish (Tg (actin-GAL4: UAS-gfp)) expressed via the actin-activated promoter to demonstrate The relationship between the visually-characterized gene silencing effect and miRNA expression, this zebrafish will always express green fluorescent protein in various cells. This zebrafish was transfected with the SpRNAi-RGFP vector and expressed a red fluorescent protein which can be used as an indicator protein. After transfecting the SpRNAi-RGFP vector into the zebrafish using FuGene cationic liposomal reagent (Roche, In), it was found that all vectors could completely enter the two-week zebrafish juveniles at 24 hours of transfection, except for the bone and scales.

該紅色螢光蛋白之指標蛋白係在被轉染之斑馬魚中被偵測到,然而綠色螢光蛋白EGFP之靜默效應被轉染miRNA-stemloop-miRNA*[2]之pre-miRNA之斑馬魚組別(miR組)中被觀察到。如圖4C所示,西方墨點分析法定量性地確定基因靜默效應於腸道(GI)係較其他組織要低,此一現象可能與腸道中較高RNase活性有關。因為anti-EGFP pre-miRNA stem-arms之五端之熱穩定度係相同的,因此推測此pre-miRNA之圓環結構係與RISC複合體之組合相關。因此基於圓環結構之多樣性,利用一組pre-mir-302圓環(例如5’-GCTAAGCCAGGC-3’(SEQ.ID.NO.1)及5’-GCCTGGCTTAGC-3’(SEQ.ID.NO.2))與RISC複合體組合以 發揮本發明之效用。 The indicator protein of the red fluorescent protein was detected in the transfected zebrafish, whereas the silent effect of the green fluorescent protein EGFP was transfected with the miRNA-stemloop-miRNA*[2] pre-miRNA zebrafish It was observed in the group (miR group). As shown in Fig. 4C, Western blot analysis quantitatively determines that the gene silencing effect is lower in the intestinal (GI) system than in other tissues, and this phenomenon may be related to higher RNase activity in the intestine. Since the thermal stability of the five ends of the anti- EGFP pre-miRNA stem-arms is the same, it is speculated that the ring structure of this pre-miRNA is related to the combination of the RISC complex. Therefore, based on the diversity of the circular structure, a set of pre-mir-302 rings (for example, 5'-GCTAAGCCAGGC-3' (SEQ.ID.NO.1) and 5'-GCCTGGCTTAGC-3' (SEQ.ID. NO. 2)) is combined with a RISC complex to exert the utility of the present invention.

於老鼠皮膚上使用intronic microRNA抑制酪胺酸酶與透明質酸酶Intronic microRNA inhibits tyrosinase and hyaluronidase on mouse skin

基於上述實驗,利用具有miR-Tyr或miR-Hyal之pre-miRNA介子之SpRNAi-RGFP載體,使色素累積相關基因如Tyr或老化相關基因如Hyal被抑制。自行設計之miR-Tyr與miR-Hyal pre-miRNA係針對一於人類或老鼠之間序列高度一致之區域。此老鼠提供一用於測試SpRNAi-RGFP載體安全性與有效性的活體實驗動物。在自然界中,有54個細胞本身之miRNA具有抑制酪胺酸酶(Tyr;2082鹼基對)之功能,此54個序列包含mir-1、mir-15a、mir-16、mir-31、mir-101、mir-129、mir-137、mir-143、mir-154、mir-194、mir-195、mir-196b、mir-200b、mir-200c、mir-206、mir-208、mir-214、mir-221、mir-222、mir-292-3p、mir-299-3p、mir-326、mir-328、mir-381、mir-409-5p、mir-434-5p、mir-450、mir-451、mir-452、mir-464、mir-466、mir-488、mir-490、mir-501、mir-522、mir-552、mir-553、mir-570、mir-571、mir-582、mir-600、mir-619、mir-624、mir-625、mir-633、mir-634、mir-690、mir-697、mir-704、mir-714、mir-759、mir-761、mir-768-5p、and mir-804。這些序列是根據miR資料庫miRBase::Sequence program(http://microrna.sanger.ac.uk)所分析得到,所有anti-Tyr miRNA都是針對酪胺酸酶(NCBI accession number NM000372)前端300個核苷酸,此外有九個 細胞本身的miRNA能用來抑制透明質酸酶(Hyal;2518 bp;NCBI accession number NM007312)包含mir-197、mir-349、mir-434-5p、mir-549、mir-605、mir-618、mir-647、mir-680、mir-702及mir-763。在這些miRNA中,mir-434-5p是唯一能針對Tyr與Hyal兩基因之最有效之miRNA抑制序列,也是最不會干擾其他基因之序列。然而,因為幾乎全部miRNA皆對超過50個特定標的基因有影響,因此這些miRNA也就不具有專一性,使皮膚照護之安全性堪慮。 Based on the above experiments, a SpRNAi-RGFP vector having a pre-miRNA meson of miR-Tyr or miR- Hyal was used to inhibit a pigment accumulation-related gene such as Tyr or an aging-related gene such as Hyal . The self-designed miR-Tyr and miR-Hyal pre-miRNA lines target a region of high homology between humans or mice. This mouse provides a live laboratory animal for testing the safety and efficacy of the SpRNAi-RGFP vector. In nature, 54 miRNAs of the cell itself have the function of inhibiting tyrosinase (Tyr; 2082 base pairs). These 54 sequences include mir-1, mir-15a, mir-16, mir-31, mir. -101, mir-129, mir-137, mir-143, mir-154, mir-194, mir-195, mir-196b, mir-200b, mir-200c, mir-206, mir-208, mir-214 , mir-221, mir-222, mir-292-3p, mir-299-3p, mir-326, mir-328, mir-381, mir-409-5p, mir-434-5p, mir-450, mir -451, mir-452, mir-464, mir-466, mir-488, mir-490, mir-501, mir-522, mir-552, mir-553, mir-570, mir-571, mir-582 , mir-600, mir-619, mir-624, mir-625, mir-633, mir-634, mir-690, mir-697, mir-704, mir-714, mir-759, mir-761, mir -768-5p, and mir-804. These sequences were analyzed according to the miR database miRBase::Sequence program (http://microrna.sanger.ac.uk), and all anti-Tyr miRNAs were directed to the front end of the tyrosinase (NCBI accession number NM000372). Nucleotides, in addition to nine cells, the miRNAs themselves can be used to inhibit hyaluronidase ( Hyal ; 2518 bp; NCBI accession number NM007312) including mir-197, mir-349, mir-434-5p, mir-549, Mir-605, mir-618, mir-647, mir-680, mir-702 and mir-763. Among these miRNAs, mir-434-5p is the only miRNA inhibitory sequence that is unique against both Tyr and Hyal genes, and is the sequence that does not interfere with other genes. However, because almost all miRNAs affect more than 50 specific target genes, these miRNAs are not specific, making skin care safe.

為了測試miRNA對於皮膚美白之可行性,藉由本發明之SpRNAi-RGFP表現載體於老鼠皮膚上表達細胞本身的pre-mir-434-5p。如圖5所示,斑駁之白化皮膚在黑色素被剃除之老鼠被形成,這係藉由連續皮下轉染具有之pre-mir-434-5p表現載體(50 μg)持續四天(共200 μg)(此為微核醣核酸組),其中酪胺酸酶Tyr係一膜蛋白在形成黑色素之過程中催化速率決定步驟。在轉染第一次後兩個禮拜,觀察到皮膚及毛髮的黑色素有明顯地減少。相反地,空白組及轉染第三型聚合酶(Pol-III)之小干擾核醣核酸組於相同劑量下卻無此效應出現,從該毛囊取出樣本並經由Northern blot分析發現,pre-mir-434-5p表現載體轉染兩天後使Tyr表現量減少76.1%±5.3%,然而其他對照組如小干擾核醣核酸組(如GAPDH組)就無此靜默效應。Grimm等人於2006年報導經由第三型聚合酶(Pol-III)所產生之高濃度之siRNA/shRNA會使細胞中miRNA路徑過飽和 (over-saturate)及造成廣泛性miRNA調節異常(dysregulation)。因此,第二型核醣核酸聚合酶系統(Pol-II)之miRNA相對提供一更有效率、更相容、更安全之皮膚照護方法。然而因為pre-mir-434-5p也會抑制其他五種細胞基因包含TRPS1、PITX1、LCOP、LYPLA2及Hyal。 To test the feasibility of miRNA for skin whitening, the pre-mir-434-5p of the cell itself was expressed on the skin of mice by the SpRNAi-RGFP expression vector of the present invention. As shown in Figure 5, mottled albino skin was formed in melanin-dissected mice by continuous subcutaneous transfection with a pre-mir-434-5p expression vector (50 μg) for four days (200 μg total) (This is the microribonucleic acid group), in which the tyrosinase Tyr-membrane protein catalyzes the rate determining step in the process of forming melanin. Two weeks after the first transfection, it was observed that the melanin of the skin and hair was significantly reduced. Conversely, the blank group and the small interfering ribonucleic acid group transfected with the third type polymerase (Pol-III) did not have this effect at the same dose. The sample was taken from the hair follicle and analyzed by Northern blot. Pre-mir- The 434-5p expression vector reduced the Tyr performance by 76.1% ± 5.3% after two days of transfection, whereas other control groups such as the small interfering ribonucleic acid group (such as the GAPDH group) did not have this silent effect. Grimm et al. reported in 2006 that high concentrations of siRNA/shRNA produced by a third type of polymerase (Pol-III) would over-saturate miRNA pathways in cells and cause extensive dysregulation of miRNAs. Thus, the miRNA of the second type ribonucleic acid polymerase system (Pol-II) provides a more efficient, more compatible, and safer method of skin care. However, because pre-mir-434-5p also inhibits the other five cellular genes including TRPS1, PITX1, LCOP, LYPLA2, and Hyal.

為了改善miRNA之專一性及安全性,再設計之mir-434-5p序列可形成與Tyr之第3-25個核苷酸或Hyal之第459-482個核苷酸區域交互作用,其中該序列用來使Tyr基因靜默之pre-miRNA insert序列係5’-GTCCGATCGT CGCCCTACTC TATTGCCTAA GCCGCTAAGC CAGGCGGCTT AGGCAATAGA GTAGGGCCGA CGCGTCAT-3’(SEQ.ID.NO.8),此序列會形成一類似髮夾之核醣核酸之基因靜默效應物,並被處理成miR-Tyr miRNA序列包含或同源於5’-GCCCTACTCT ATTGCCTAAG CC-3’(SEQ.ID.NO.9),於其他實施例中,對Hyal抑制之pre-miRNA為5’-GTCCGATCGT CAGCTAGACA GTCAGGGTTT GAAGCTAAGC CAGGCTTCAA ACCCTGACTG TCTAGCTCGA CGCGTCAT-3’(SEQ.ID.NO.10),該序列會形成一不同之類似髮夾之核醣核酸,並被處理成miR-Hyal miRNA序列包含或同源於5’-AGCTAGACAG TCAGGGTTTG AA-3’(SEQ.ID.NO.11)。雖然,pre-miR-Tyr及pre-miR-Hyal構造係基於相同之mir-434-5p及mir-302圓環結構,成熟之miR-Tyr 及miR-Hyal係與相互完全不同,如圖6所示,miR-Tyr組與miR-Hyal組轉染於老鼠皮膚上分別使酪胺酸酶被抑制超過90%,而透明質酸酶被抑制超過67%,同時沒有任何非專一性之靜默抑制產生,成熟之miR-Tyr及miR-Hyal miRNA的表現量係被北方墨點法(Northern bot)分析所定量,而酪胺酸酶與透明質酸酶係被西方墨點法(Western blot)分析定量。 In order to improve the specificity and safety of miRNA, the redesigned mir-434-5p sequence can form a 3-25 nucleotide sequence of Tyr or a 459-482 nucleotide region of Hyal, wherein the sequence The pre-miRNA insert sequence used to silence the Tyr gene is 5'-GTCCGATCGT CGCCCTACTC TATTGCCTAA GCCGCTAAGC CAGGCGGCTT AGGCAATAGA GTAGGGCCGA CGCGTCAT-3' (SEQ.ID.NO.8), which forms a hairpin-like ribonucleic acid gene. Silent effector, and processed to miR-Tyr miRNA sequence contains or homologous to 5'-GCCCTACTCT ATTGCCTAAG CC-3' (SEQ.ID.NO.9), in other examples, Hyal inhibited pre-miRNA Is 5'-GTCCGATCGT CAGCTAGACA GTCAGGGTTT GAAGCTAAGC CAGGCTTCAA ACCCTGACTG TCTAGCTCGA CGCGTCAT-3' (SEQ.ID.NO.10), which forms a different hairpin-like ribonucleic acid and is processed into a miR-Hyal miRNA sequence containing or Homologous to 5'-AGCTAGACAG TCAGGGTTTG AA-3' (SEQ. ID. NO. 11). Although the pre-miR-Tyr and pre-miR-Hyal constructs are based on the same mir-434-5p and mir-302 ring structures, the mature miR-Tyr And the miR-Hyal line is completely different from each other. As shown in Fig. 6, the miR-Tyr group and the miR-Hyal group are transfected on the skin of mice to inhibit tyrosinase by more than 90%, respectively, and hyaluronidase is inhibited. More than 67%, without any non-specific silent suppression, the expression of mature miR-Tyr and miR-Hyal miRNA was quantified by Northern bot analysis, while tyrosinase and hyaluronan The acidase system was quantified by Western blot analysis.

在人類皮膚上之miR-Tyr與miR-Hyal之基因靜默專一性與安全性Silence specificity and safety of miR-Tyr and miR-Hyal genes on human skin

在了解基因靜默效應之本發明之內含子之miR-Tyr與miR-Hyal核醣核酸干擾效應物,為了進一步測試在人體皮膚細胞及組織中具有miR-Tyr與miR-Hyal之SpRNAi-RGFP載體係有專一性與安全性。為了有效轉染載體進入人類表皮細胞,將SpRNAi-RGFP載體溶液(1μg/ml)(該溶液係100μg之SpRNAi-RGFP載體與99ml之無DNase之甘油(DNase-free glycerin)及1ml滅菌去離子水混合而成)轉染入細胞。其中,DNase-free glycerin能用來幫助miR-Tyr形成囊胞以增加轉染入深層皮膚的效率及細胞膜的穿透。這是用來美白皮膚之主要成分,在其它實施例中,也可以藉由添加其他成分以增進氣味、顏色、有效性及穩定性以成為一完成之化妝品。如圖7A所示,亞洲男生手臂皮膚經由2ml之此主要成分處理後,經過三天與無任何靜默效應物之SpRNAi-RGFP載體的甘油對照組比較,發現的確較為白皙。 The miR-Tyr and miR-Hyal RNA interference effectors of the intron of the present invention, which are known for the gene silencing effect, for further testing of the SpRNAi-RGFP vector line having miR-Tyr and miR-Hyal in human skin cells and tissues Specificity and security. To efficiently transfect the vector into human epidermal cells, SpRNAi-RGFP vector solution (1 μg/ml) (100 μg of SpRNAi-RGFP vector with 99 ml of DNase-free glycerin and 1 ml of sterile deionized water) Mixed into) transfected into cells. Among them, DNase-free glycerin can be used to help miR-Tyr form cysts to increase the efficiency of transfection into deep skin and cell membrane penetration. This is the main ingredient used to whiten the skin. In other embodiments, it can also be a finished cosmetic by adding other ingredients to enhance odor, color, effectiveness and stability. As shown in Fig. 7A, the Asian male arm skin was treated with 2 ml of this main component, and after three days, compared with the glycerol control group of the SpRNAi-RGFP vector without any silent effector, it was found to be more fair.

而所培養之皮膚細胞係經由捐贈者同意並取自捐贈者身上,所有處理過程都經過同意的原則下才進行處理。轉染載體至這些皮膚細胞,如實施例三及六所示。圖7B顯示,經由西方墨點法(Western blot)分析,所減少的酪胺酸酶及其所產生之黑色素具有統計上之意義(p>0.001)。酪胺酸酶量的減少與其黑色素受質與所轉染之miR-Tyr之劑量成正比,此現象顯示miR-Tyr之劑量增加與酪胺酸酶及其黑色素受質成正相關。在其他實驗組例如不具任何miRNA insert之SpRNAi-RGFP載體的甘油組(glycerin)及表現anti-EGEP pre-miRNA insert之SpRNAi-RGFP載體的miR-gfp組就無此減少現象發生。miR-Tyr組表現載體(1μg/ml)轉染時,酪胺酸酶之最大靜默效應約55%到60%以及黑色素靜默效應約30%到45%,同時肌動蛋白係不被miR-Tyr所干擾靜默,因此暗示本發明具有安全之專一性現象。圖7C進一步顯示皮膚黑色素有明顯減少,如皮膚細胞培養之明亮區(bright-field,BF)所示,然而在無miR-Tyr之正常皮膚細胞中,黑色素係在細胞核附近沉澱。而經過miR-Tyr轉染之細胞的黑色素沉澱現象係非常少出現,這顯示了miR-Tyr在細胞中具有美白效應。根據此黑色素減少現象,經過miR-Tyr轉染之皮膚細胞中也伴隨著酪胺酸酶的減少,此現象可由免疫細胞化學染色分析(immunocytochemical staining analysis,ICC),如圖7C所示。因此,基於圖7A到如7C,miR-Tyr miRNA之SpRNAi-RGFP載體系能於細胞中成功 有效地抑制酪胺酸酶及黑色素。 The cultured skin cell line is approved by the donor and taken from the donor, and all treatments are processed with the consent. The vector was transfected into these skin cells as shown in Examples III and 6. Figure 7B shows that the reduced tyrosinase and the melanin produced by the Western blot analysis were statistically significant (p > 0.001). The decrease in the amount of tyrosinase is directly proportional to the dose of the melanin receptor and the transfected miR-Tyr. This phenomenon indicates that the dose increase of miR-Tyr is positively correlated with the tyrosinase and its melanin receptor. This reduction was not observed in other experimental groups such as the glycerin group of the SpRNAi-RGFP vector without any miRNA insert and the miR-gfp group of the SpRNAi-RGFP vector expressing the anti- EGEP pre-miRNA insert. When transfected with the miR-Tyr expression vector (1 μg/ml), the maximum silent effect of tyrosinase was about 55% to 60% and the melanin silent effect was about 30% to 45%, while the actin system was not affected by miR-Tyr. The interference is silent, thus suggesting that the invention has a safety specificity phenomenon. Figure 7C further shows a significant reduction in skin melanin, as indicated by the bright-field (BF) of skin cell culture, whereas in normal skin cells without miR-Tyr, the melanin system precipitates near the nucleus. The phenomenon of melanin precipitation in cells transfected with miR-Tyr is very rare, indicating that miR-Tyr has a whitening effect in cells. According to this melanin reduction phenomenon, the skin cells transfected with miR-Tyr are also accompanied by a decrease in tyrosinase, which can be analyzed by immunocytochemical staining analysis (ICC), as shown in Fig. 7C. Therefore, based on FIG. 7A to, for example, 7C, the SpRNAi-RGFP vector of the miR-Tyr miRNA can successfully inhibit tyrosinase and melanin in cells.

在miR-Tyr之基因靜默效應在人類皮膚細胞中建立後,利用生物晶片(GeneChip U133A & B arrays,Affymetrix,Santa Clara,CA)分析核醣核酸以評估於超過32668個人類基因在具有miR-Tyr轉染之細胞與無miR-Tyr轉染之細胞比較分析,分析結果顯示較專一性之基因靜默比無專一性之基因之靜默要多很多。每株測試細胞株之全部RNA由RNeasy spin column(Qiagen,Valencia,CA)所純化。如圖8A所示,無miR-Tyr(也就是miR-)與有miR-Tyr(也就是miR+)之細胞株之生物晶片分析現顯示只有兩基因之改變量超過1.5倍(也就是基因表現量有大於50%之改變),此兩基因係為酪胺酸酶基因及與其交互作用之TRP1基因(如圖8B所示),此暗示了miR-Tyr所引發之基因靜默效應對於酪胺酸酶係很專一。此外並無其他細胞毒性或係PKR/2-5A路徑被影響,此現象證明miR-Tyr基因靜默效應對於皮膚應用方面具有相當之安全性(圖8B所示)。進一步也利用Northern blotting分析比較這些被生物晶片所辨認到之基因(如圖8C所示)表現程度,以證實與圖8A及8B所示之實驗結果相符。進一步將miR-Tyr轉染組(miR+)(圖8A右)與無轉染組(miR-)比較發現在32558個基因表現之相關係數(correlation coefficiency)係99.8%,而mir-434-5p轉染組與無轉染組(miR-)之相關係數為77.6%,這意謂著miR-Tyr轉染組只有65個基因受到miR-Tyr的影響,但卻有7317個基因受到 mir-434-5p轉染之影響而改變。因為miRNA具有針對眾多基因之靜默功能,此功能係基於它們的mismatched stem-arms結構,因此本發明證實,將此stem-arms結構之再設計對於此miRNA安全性係必須的。 After the gene silencing effect of miR-Tyr was established in human skin cells, ribonucleic acid was analyzed using biochips (GeneChip U133A & B arrays, Affymetrix, Santa Clara, CA) to evaluate more than 32,668 human genes with miR-Tyr Comparing the cells stained with cells without miR-Tyr transfection, the results showed that the gene silencing of specificity was much more silent than that of genes without specificity. The entire RNA of each test cell strain was purified by RNeasy spin column (Qiagen, Valencia, CA). As shown in Figure 8A, biochip analysis of no miR-Tyr (i.e., miR-) and cell lines with miR-Tyr (i.e., miR+) now shows that only two genes are altered by more than 1.5 fold (i.e., gene expression). There are more than 50% changes), the two genes are the tyrosinase gene and the TRP1 gene interacting with it (as shown in Figure 8B), suggesting that the gene silencing effect induced by miR-Tyr is for tyrosinase The department is very specific. In addition, no other cytotoxicity or PKR/2-5A pathway was affected, suggesting that the miR-Tyr gene silencing effect is quite safe for dermal applications (Figure 8B). Further, Northern blotting analysis was also used to compare the degree of expression of these genes recognized by the biochip (as shown in Fig. 8C) to confirm the results of the experiments shown in Figs. 8A and 8B. Further comparing the miR-Tyr transfection group (miR+) (Fig. 8A right) with the untransfected group (miR-), the correlation coefficient (correlation coefficiency) of the 32558 genes was 99.8%, while the mir-434-5p was transferred. The correlation coefficient between the stained group and the untransfected group (miR-) was 77.6%, which means that only 65 genes in the miR-Tyr transfection group were affected by miR-Tyr, but 7317 genes were affected. The effect of mir-434-5p transfection changed. Because miRNAs have silent functions against a wide range of genes based on their mismatched stem-arms structure, the present invention demonstrates that redesigning this stem-arms structure is essential for this miRNA safety.

因此,本發明使用intronic hairpin-like miRNA/shRNA表現載體能提供一有效的方法於細胞內之皮膚照護,特別係用於色素沉積及老化預防。在相同處置下,Pol-II-transcribed intronic miRNA並不會造成任何可偵測之細胞毒性,如同Pol-III-directed siRNA所誘發non-specific mRNA降解(Sledz et.al.supra;Lin(2004b)supra)。這強調intronic miRNA係有效率而專一性之方法而其並無雙股siRNA之細胞毒性。因為該intronic miRNA-mediated基因靜默路徑係與眾多細胞內調控系統協同作用,因此基因靜默效應物藉由包含Pol-II轉錄系統、RNA剪接系統(內含子切除機制)及NMD系統等系統協同運作,而使intronic miRNA之靜默效應被認為是更有效、專一、安全在目前所有已知之RNAi路徑,基於所有優勢條件,使用再設計之intronic miRNAs提供一於皮膚照護相對長期、有效、專一及安全之基因調控方法,能避免如傳統siRNA所產生之非專一基因靜默細胞毒性 Therefore, the present invention uses an intronic hairpin-like miRNA/shRNA expression vector to provide an effective method for intracellular skin care, particularly for pigmentation and aging prevention. At the same treatment, Pol-II-transcribed intronic miRNA does not cause any detectable cytotoxicity, as does non-specific mRNA degradation induced by Pol-III-directed siRNA (Sledz et.al.supra ; Lin (2004b) Supra ). This emphasizes that the intronic miRNA is an efficient and specific method without the cytotoxicity of the double-stranded siRNA. Because the intronic miRNA-mediated gene silencing pathway works synergistically with numerous intracellular regulatory systems, gene silencing effectors work together by systems including the Pol-II transcription system, the RNA splicing system (intron excision mechanism), and the NMD system. The intronic miRNA silencing effect is considered to be more efficient, specific, and safe in all current known RNAi pathways, based on all the advantages, using redesigned intronic miRNAs to provide a long-term, effective, specific and safe skin care Gene regulation method can avoid non-specific gene silent cytotoxicity such as traditional siRNA

本發明已由上述相關實施例加以描述,然而上述實施例僅為實施本發明之範例。必需指出的是,已揭露之實施例並未限制本發明之範圍。相反地,包含於申請專利範圍之精神及範圍 之修改及均等設置均包含於本發明之範圍內。 The present invention has been described by the above-described related embodiments, but the above embodiments are merely examples for implementing the present invention. It must be noted that the disclosed embodiments do not limit the scope of the invention. Conversely, the spirit and scope of the scope of the patent application Modifications and equal arrangements are intended to be included within the scope of the invention.

以下實驗設計為舉例說明,但並不限制本發明之範圍。對所有熟習本領域之人士來說,可於不脫離本發明的精神和範圍內,對此做合理的變化。 The following experimental design is illustrative, but does not limit the scope of the invention. Reasonable changes can be made to those skilled in the art without departing from the spirit and scope of the invention.

實施例一建構一包含SpRNAi之重組基因(SpRNAi-RGFP)合成用於產生三種不同SpRNAi核苷酸序列,該序列包含:N1-sense,5’-pGTAAGAGGAT CCGATCGCAG GAGCGCACCA TCTTCTTCAA GA-3’(SEQ.ID.NO.12);N1-antisense,5’-pCGCGTCTTGA AGAAGATGGT GCGCTCCTGC GATCGGATCC TCTTAC-3’(SEQ.ID.NO.13);N2-sense,5’-pGTAAGAGGAT CCGATCGCTT GAAGAAGATG GTGCGCTCCT GA-3’(SEQ.ID.NO.14);N2-antisense,5’-pCGCGTCAGGA GCGCACCATC TTCTTCAAGC GATCGGATCC TCTTAC-3’(SEQ.ID.NO.15);N3-sense,5’-pGTAAGAGGAT CCGATCGCAG GAGCGCACCA TCTTCTTCAA GTTAACTTGA AGAAGATGGT GCGCTCCTGA-3’(SEQ.ID.NO.16);N3-antisense,5’-pCGCGTCAGGA GCGCACCATC TTCTTCAAGT TAACTTGAAG AAGATGGTGC GCTCCTGCGA TCGGATCCTC TTAC-3’(SEQ.ID.NO.17);N4-sense,5’-pCGCGTTACTA ACTGGTACCT CTTCTTTTTT TTTTTGATAT CCTGCAG-3’(SEQ.ID.NO.18);N4-antisense, 5’-pGTCCTGCAGG ATATCAAAAA AAAAAGAAGA GGTACCAGTT AGTAA-3’(SEQ.ID.NQ.19)。此外,兩外顯子片段係被DraII限制酶切紅色螢光RGFP基因(SEQ.ID.NO.20)之第208個核苷酸處所產生,而被切後之五端係被T4 DNA polymerase進一步形成blunt end。被切後之空隙可由人造SpRNAi內含子所填補。此RGFP係至一紅色螢光蛋白基因,此蛋白係藉由加入一額外的天門冬胺基酸(Aspartate)於HcRed1 chromoproteins(由Heteractis crispa所衍生)的第69的胺基酸處所形成。(BD Biosciences,CA)發展出較少的變性以及幾乎兩倍強度之紅色螢光570nm波長射線。利用pHcRed1-N1/1載體(Clontech BD Biosciences,Palo Alto,CA;catalog #6365-1)修改成SpRNAi-RGFP表現載體,pHcRed1-N1/1載體已經含有HcRed1的紅色螢光蛋白基因,其中HcRed1蛋白是由海葵Heteractis crispa中純化。運用pHcRed1-N1/1載體與XhoIXbaI限制酶分離並用2% agarose gel電泳純化全長769 bp之RGFP基因片段與3934bp之無RGFP之載體。 Example 1 Construction of a recombinant gene comprising SpRNAi ( SspRNAi-RGFP ) for the production of three different SpRNAi nucleotide sequences comprising: N1-sense, 5'-pGTAAGAGGAT CCGATCGCAG GAGCGCACCA TCTTCTTCAA GA-3' (SEQ. ID .NO.12); N1-antisense, 5'-pCGCGTCTTGA AGAAGATGGT GCGCTCCTGC GATCGGATCC TCTTAC-3'(SEQ.ID.NO.13); N2-sense, 5'-pGTAAGAGGAT CCGATCGCTT GAAGAAGATG GTGCGCTCCT GA-3' (SEQ.ID .NO.14); N2-antisense, 5'-pCGCGTCAGGA GCGCACCATC TTCTTCAAGC GATCGGATCC TCTTAC-3'(SEQ.ID.NO.15); N3-sense, 5'-pGTAAGAGGAT CCGATCGCAG GAGCGCACCA TCTTCTTCAA GTTAACTTGA AGAAGATGGT GCGCTCCTGA-3' (SEQ .ID.NO.16); N3-antisense, 5'-pCGCGTCAGGA GCGCACCATC TTCTTCAAGT TAACTTGAAG AAGATGGTGC GCTCCTGCGA TCGGATCCTC TTAC-3'(SEQ.ID.NO.17); N4-sense, 5'-pCGCGTTACTA ACTGGTACCT CTTCTTTTTT TTTTTGATAT CCTGCAG-3 '(SEQ.ID.NO.18); N4-antisense, 5'-pGTCCTGCAGG ATATCAAAAA AAAAAGAAGA GGTACCAGTT AGTAA-3' (SEQ. ID. NQ. 19). In addition, the two exon fragments were generated by the 208th nucleotide of the red fluorescent RGFP gene (SEQ.ID.NO.20) by DraII restriction enzyme digestion, and the cleaved five-terminal system was further amplified by T4 DNA polymerase. Form a blunt end. The cut void can be filled by an artificial SpRNAi intron. This RGFP is linked to a red fluorescent protein gene which is formed by the addition of an additional aspartate to the amino acid group 69 of HcRed1 chromoproteins (derived from Heteractis crispa ). (BD Biosciences, CA) developed less denaturation and nearly twice the intensity of red fluorescent 570 nm wavelength radiation. The SpRNAi-RGFP expression vector was modified with the pHcRed1-N1/1 vector (Clontech BD Biosciences, Palo Alto, CA; catalog #6365-1), and the pHcRed1-N1/1 vector already contained the red fluorescent protein gene of HcRed1, of which HcRed1 protein It is purified from sea anemone Heteractis crispa . Using pHcRed1-N1 / 1 vector with XhoI and XbaI restriction enzyme was isolated and purified using 2% agarose gel electrophoresis RGFP gene of the full length 769 bp fragment of 3934bp of free RGFP vector.

將N1-sense與N1-antisense、N2-sense與N2-antisense、N3-sense與N3-antisense及N4-sense與N4-antisense個別加熱每個互補序列到94℃(2分鐘)之後70℃(10分鐘)並於1xPCR buffer(50mM Tris-HCl,pH9.2 at 25℃,16mM(NH4)2SO4)。接著藉由逐漸冷卻N1-N4、N2-N4、N3-N4(1:1)來聯接N1、N2、N3到N4,溫度由50℃到10℃作用超過1小時,之後用T4 ligase 聯接酶及相對應之緩衝液(Roche,IN)與其混合12小時(12℃),而使內含子能插入外顯子之適當位置。在RGFP外顯子片段被加入反應(1:1:1)後,T4 ligase及相對應之緩衝液被調整再一次進行連接反應12小時(12℃)。為了將正確大小的重組基因RGFP接入載體,10ng之聯接核苷酸(ligated nucleotide)序列利用PCR技術及一對RGFP特定引子(primer)5’-CTCGAGCATG GTGAGCGGCC TGCTGAA-3’(SEQ.ID.NO.21)與5’-TCTAGAAGTT GGCCTTCTCG GGCAGGT-3’(SEQ.ID.NO.22)在PCR條件於94℃(1分鐘)、52℃(1分鐘)、68℃(2分鐘)並進行30次同樣反應。利用2% agarose gel分離出PCR之產物及約900bp大小之核苷酸序列被Gel Extraction kit(Qiagen,CA)所純化出來。此900bp大小之核苷酸之具有SpRNAi功能之RGFP基因進一步用序列比對確定。 N1-sense and N1-antisense, N2-sense and N2-antisense, N3-sense and N3-antisense, and N4-sense and N4-antisense individually heat each complementary sequence to 94 ° C (2 minutes) after 70 ° C (10 Minutes) and 1x PCR buffer (50 mM Tris-HCl, pH 9.2 at 25 ° C, 16 mM (NH 4 ) 2 SO 4 ). Then, by gradually cooling N1-N4, N2-N4, N3-N4 (1:1), N1, N2, N3 to N4 are connected, and the temperature is applied from 50 ° C to 10 ° C for more than 1 hour, after which the enzyme is coupled with T4 ligase and The corresponding buffer (Roche, IN) was mixed with it for 12 hours (12 ° C), so that the intron could be inserted into the appropriate position of the exon. After the RGFP exon fragment was added to the reaction (1:1:1), the T4 ligase and the corresponding buffer were adjusted to carry out the ligation reaction for another 12 hours (12 ° C). In order to access the correct size of the recombinant gene RGFP into the vector, 10 ng of the ligated nucleotide sequence utilizes PCR technology and a pair of RGFP- specific primers 5'-CTCGAGCATG GTGAGCGGCC TGCTGAA-3' (SEQ.ID.NO) .21) and 5'-TCTAGAAGTT GGCCTTCTCG GGCAGGT-3' (SEQ.ID.NO.22) in PCR conditions at 94 ° C (1 minute), 52 ° C (1 minute), 68 ° C (2 minutes) and 30 times The same reaction. The product of the PCR and the nucleotide sequence of about 900 bp were isolated by a 2% agarose gel and purified by a Gel Extraction kit (Qiagen, CA). The SpRNAi- functional RGFP gene of this 900 bp nucleotide was further determined by sequence alignment.

因為重組基因是利用XhoIXbaI限制酶切位分別在五端及三端將重組基因接入載體中,此載體必須具有皮膚相容性、及能於有機體內表現之特徵,此表現載體包含質體(plasmids)、柯斯盾粒cosmids、噬菌粒phagemids、酵母人工染色體yeast artificial chromosomes、跳躍基因(jumping genes)、轉位子(transposons)、反轉錄跳躍子retrotransposons、反轉錄病毒載體retroviral vectors。此外,因為該插入重組基因是被PvuIMluI限制酶切位所連接在五端及三端,因此也能利用 同樣的限制酶切位將其他不同重組基因接入載體。該插入重組基因較佳係一類似小夾之基因靜默效應物(gene silencing effector),該基因靜默效應物能針對具有綠色螢光蛋白、螢光素基因、乳糖控制組(lac-Z)、病毒基因、細菌基因、植物基因、動物及人類基因等序列進行靜默。這些靜默效應物介子(insert)與其標的基因序列之互補或同源率約30%到100%之間,對hairpin-shRNA介子(insert)較佳為35%到49%之間,對sense-stRNA與antisense-siRNA介子而言,較佳之序列互補率範圍為90%到100%。 Because the recombinant gene uses the XhoI and XbaI restriction enzyme sites to insert the recombinant gene into the vector at the five-terminal and three-terminal ends, the vector must have skin compatibility and characteristics in the organism, and the expression carrier contains the substance. Plasmids, cosmids, phagemids, yeast artificial chromosomes, jumping genes, transposons, retrotransposons, retroviral vectors. In addition, since the inserted recombinant gene is ligated to the five-terminal and three-terminal positions by the PvuI and MluI restriction enzyme cleavage sites, it is also possible to use the same restriction enzyme cleavage site to introduce other different recombinant genes into the vector. Preferably, the inserted recombinant gene is a gene silencing effector similar to a small clip, and the gene silencing effector can be directed to a green fluorescent protein, a luciferin gene, a lactose control group (lac-Z), a virus. Sequences of genes, bacterial genes, plant genes, animals, and human genes are silenced. These silent effector mesons have a complementarity or homology rate of about 30% to 100% with their target gene sequence, and between 35% and 49% for hairpin-shRNA mesons, for sense-stRNA For antisense-siRNA mesons, the preferred sequence complementarity ranges from 90% to 100%.

實施例二建構一包含SpRNAi之重組基因(SpRNAi-RGFP)進入表現載體Example 2 constructing a recombinant gene containing SpRNAi ( SspRNAi-RGFP ) into an expression vector

因為重組SpRNAi-RGFP基因具有XhoIXbaI等限制酶切位於五端及三端,並能利用該等切位將重組基因接入載體,將SpRNAi-RGFP與3934bp之pHcRed-N1/1載體以1:16(w/w)混合,並降溫從65℃到15℃超過50分鐘,之後加入T4 ligase及其緩衝液混合12℃(12小時)。SpRNAi-RGFP載體能利用E.coli DH5 α LB(50ug/ml kanamycin(Sigma Chemical,St.Louis,Mo))進行大量複製,並利用PCR技術及其RGFP特定引子(SEQ.ID.NO.21)及(SEQ.ID.NO.22)於94℃(1分鐘)、68℃(2分鐘)並進行30次循環反應並比對確認其序列。為了將重組基因接入病毒載體,相同的程序也能利用XhoI/XbaI-linearized pLNCX2反轉錄病毒載體(BD)實行。因為SpRNAi是被PvuIMluI限制酶切位所連接於五端及三端,因此能利用該等切位去除或連接anti-EGFP shRNA或miR-Tyr or miR-Hyal等序列。 Because the recombinant SpRNAi-RGFP gene has restriction enzymes such as XhoI and XbaI at the five-terminal and three-terminal ends, and can use the cleavage to insert the recombinant gene into the vector, the SpRNAi-RGFP and the 3934 bp pHcRed-N1/1 vector are 1 : 16 (w/w) was mixed and cooled from 65 ° C to 15 ° C for more than 50 minutes, after which T4 ligase and its buffer were added and mixed at 12 ° C (12 hours). The SpRNAi-RGFP vector can be replicated in large quantities using E. coli DH5 α LB (50 ug/ml kanamycin (Sigma Chemical, St. Louis, Mo.)) and utilizes PCR technology and its RGFP- specific primer (SEQ.ID.NO.21). And (SEQ. ID. NO. 22) at 94 ° C (1 minute), 68 ° C (2 minutes) and 30 cycles of reaction and alignment confirmed the sequence. In order to access the recombinant gene into a viral vector, the same procedure can also be carried out using the XhoI/XbaI- linearized pLNCX2 retroviral vector (BD). Since SpRNAi is ligated to the five-terminal and three-terminal ends by the PvuI and MluI restriction enzyme cleavage, these cleavage sites can be used to remove or link anti- EGFP shRNA or miR-Tyr or miR-Hyal sequences.

合成核苷酸序列可用來產生許多不同SpRNAi人造內含子包含更多不同之miR-Tyr或miR-Hyal介子(insert),此介子係類似小夾先驅微核醣核酸,如下所示:miR-Tyr-sense,5’-GTCCGATCGT CGCCCTACTC TATTGCCTAA GCCGCTAAGC CAGGCGGCTT AGGCAATAGA GTAGGGCCGA CGCGTCAT-3’(SEQ.ID.NO.8);miR-Tyr-antisense,5’-ATGACGCGTC GGCCCTACTC TATTGCCTAA GCCGCCTGGC TTAGCGGCTT AGGCAATAGA GTAGGGCGAC GATCGGAC-3’(SEQ.ID.NO.23);與miR-Hyal-sense,5’-GTCCGATCGT CAGCTAGACA GTCAGGGTTT GAAGCTAAGC CAGGCTTCAA ACCCTGACTG TCTAGCTCGA CGCGTCAT-3’(SEQ.ID.NO.10);miR-Hyal-antisense,5’-ATGACGCGTC GAGCTAGACA GTCAGGGTTT GAAGCCTGGC TTAGGTTCAA ACCCTGACTG TCTAGCTGAC GATCGGAC-3’(SEQ.ID.NO.24)。這些介子能藉雜交方式如個別地miR-Tyr-sense對miR-Tyr-antisense及個別地miR-Hyal-sense對miR-Hyal-antisense進行序列互補。這些miR-Tyr及miR-Hyal表現載體能利用E.coli DH5 α LB(50ug/ml kanamycin(用於pHcRed1-N1/1載體)或100ug/ml kanamycin(用於pLNCX2載體))進行大量複製,並利用Mini-prep或Maxi-prep plasmid extraction kit(Qiagen,CA)純化並單離SpRNAi-RGFP載體。至於pLNCX2載體,可利用packaging cell lines PT67(BD)用來產生感染但不能複製之病毒,該感染之PT67細胞株於1xDMEM medium(10%FBS,4mM L-glutamine,1mM sodium pyruvate,100ug/ml streptomycin sulfate和50ug/ml neomycin(Sigma Chemical,MO)在37℃,5% CO2以下),病毒劑量約在106cfu/ml左右。 Synthetic nucleotide sequences can be used to generate many different SpRNAi artificial introns containing more different miR-Tyr or miR-Hyal mesons, which are similar to the small-clamp precursor microRNA, as follows: miR-Tyr -sense,5'-GTCCGATCGT CGCCCTACTC TATTGCCTAA GCCGCTAAGC CAGGCGGCTT AGGCAATAGA GTAGGGCCGA CGCGTCAT-3'(SEQ.ID.NO.8);miR-Tyr-antisense,5'-ATGACGCGTC GGCCCTACTC TATTGCCTAA GCCGCCTGGC TTAGCGGCTT AGGCAATAGA GTAGGGCGAC GATCGGAC-3' (SEQ. ID.NO.23); and miR-Hyal-sense, 5'-GTCCGATCGT CAGCTAGACA GTCAGGGTTT GAAGCTAAGC CAGGCTTCAA ACCCTGACTG TCTAGCTCGA CGCGTCAT-3'(SEQ.ID.NO.10); miR-Hyal-antisense, 5'-ATGACGCGTC GAGCTAGACA GTCAGGGTTT GAAGCCTGGC TTAGGTTCAA ACCCTGACTG TCTAGCTGAC GATCGGAC-3' (SEQ. ID. NO. 24). These mesons can complement the miR-Tyr-antisense and the miR-Hyal-sense to miR-Hyal-antisense by hybridization, such as miR-Tyr-sense. These miR-Tyr and miR-Hyal expression vectors can be efficiently replicated using E. coli DH5 α LB (50 ug/ml kanamycin (for pHcRed1-N1/1 vector) or 100 ug/ml kanamycin (for pLNCX2 vector)). The SpRNAi-RGFP vector was purified and isolated from the Mini-prep or Maxi-prep plasmid extraction kit (Qiagen, CA). As for the pLNCX2 vector, the packaging cell lines PT67 (BD) can be used to generate an infected but not replicable virus. The infected PT67 cell line is in 1xDMEM medium (10% FBS, 4 mM L-glutamine, 1 mM sodium pyruvate, 100 ug/ml streptomycin). Sulfate and 50 ug/ml neomycin (Sigma Chemical, MO) at 37 ° C, 5% CO 2 or less), the virus dose is about 10 6 cfu / ml.

實施例三in vivo轉染Example 3 in vivo transfection

對於轉染載體進入細胞株、斑馬魚幼苗及老鼠皮膚,首先會將具有anti-EGFP、miR-Tyr或miR-Hyal pre-miRNA insert之SpRNAi-RGFP表現載體與FuGene reagent(Roche,IN)混合後,並遵照FuGene reagent的使用指示,接著將具有無介子(insert-free)RGFPSpRNAi-RGFP結構之載體直接個別地放置或塗抹在細胞株、斑馬魚幼苗及老鼠皮膚上,此時是用against HIV gag-p-24之pre-miRNA insert組當成negative control組。並在轉染後0、24、48及72小時後觀察細胞或組織之外型及其螢光染色現象。對於人類皮膚上之in vivo轉染方式,將事先處理好之SpRNAi-RGFP載體溶液係藉由混合1-1000μg具有anti-EGFP或不具有anti-EGFP、miR-Tyr或miR-Hyal pre-miRNA insert之SpRNAi-RGFP載體、1ml autoclaved ddH2O及99ml之100% DNase-free glycerin(or glycerol)。接著,該混合溶液能直接塗抹及按摩在人體皮膚上而產生其效用。 For the transfection vector into cell lines, zebrafish seedlings and mouse skin, the SpRNAi-RGFP expression vector with anti- EGFP , miR-Tyr or miR-Hyal pre-miRNA insert is first mixed with FuGene reagent (Roche, IN). And following the instructions of FuGene reagent, the vector with the structure of insert-free RGFP and SpRNAi-RGFP was directly placed or smeared on the cell line, zebrafish seedling and mouse skin at this time. The pre-miRNA insert group of HIV gag-p-24 was used as the negative control group. The cell or tissue appearance and its fluorescent staining were observed at 0, 24, 48 and 72 hours after transfection. For in vivo transfection on human skin, the previously processed SpRNAi-RGFP vector solution is prepared by mixing 1-1000 μg with anti- EGFP or without anti- EGFP , miR-Tyr or miR-Hyal pre-miRNA insert SpRNAi-RGFP vector, 1 ml autoclaved ddH 2 O and 99 ml of 100% DNase-free glycerin (or glycerol). Then, the mixed solution can be directly applied and massaged on human skin to produce its effect.

實施例四Northern Blot AnalysisEmbodiment 4 Northern Blot Analysis

RNA(20μg total RNA or 2ug poly[A+]RNA)經由1% formaldehyde-agarose gels電泳分離後利用毛細現象將RNA吸附在尼龍膜上(Schleicher & Schuell,Keene,NH)。合成之探針設計能互補於連接RGFP之5端外顯子與anti-EGFP pre-miRNA insert之間之75 bp junction sequence或互補於miR-Tyr(SEQ.ID.NO.9)或miR-Hyal(SEQ.ID.NO.10),其中miR-Hyal係被Prime-It II kit(Stratagene,La Jolla,CA)所標定,並藉由random primer extension技術,使用[32P]-dATP(>3000 Ci/mM,Amersham International,Arlington Heights,IL)及所純化之10 bp-cutoff Micro Bio-Spin chromatography columns(Bio-Rad,Hercules,CA)來標定序列。再藉由混合50%去離子甲醯胺(deionized formamide)(pH 7.0,5x Denhardt’s solution,0.5% SDS,4 x SSPE and 250 mg/mL denatured salmon sperm DNA fragments(18 hr,42℃))來減少非專一性訊號。之後再用尼龍膜於2x SSC,0.1% SDS(15 min,25℃)以及0.2 x SSC,0.1% SDS(45 min,37℃)之方式將雜質洗除後,進行(自動)放射攝影術(autoradiography)。 RNA (20 μg total RNA or 2 ug poly[A + ] RNA) was separated by electrophoresis on 1% formaldehyde-agarose gels to adsorb RNA onto the nylon membrane (Schleicher & Schuell, Keene, NH). The synthetic probe design is complementary to a 75 bp junction sequence between the 5-terminal exon of RGFP and the anti- EGFP pre-miRNA insert or complementary to miR-Tyr (SEQ.ID.NO.9) or miR-Hyal (SEQ. ID. NO. 10), wherein the miR-Hyal line was calibrated by the Prime-It II kit (Stratagene, La Jolla, CA) and using [ 32 P]-dATP (>3000 by random primer extension technique) The sequence was calibrated by Ci/mM, Amersham International, Arlington Heights, IL) and purified 10 bp-cutoff Micro Bio-Spin chromatography columns (Bio-Rad, Hercules, CA). Reduced by mixing 50% deionized formamide (pH 7.0, 5x Denhardt's solution, 0.5% SDS, 4 x SSPE and 250 mg/mL denatured salmon sperm DNA fragments (18 hr, 42 ° C)) Non-specific signal. After that, the impurities were washed off with 2 x SSC, 0.1% SDS (15 min, 25 ° C) and 0.2 x SSC, 0.1% SDS (45 min, 37 ° C), and (automatic) radiography was performed ( Autoradiography).

實施例五SDS-PAGE及Western Blot AnalysisExample 5 SDS-PAGE and Western Blot Analysis

對於特定蛋白之immunoblotting,去除培養液之被分離之細胞株經過冰的PBS潤拭,用CelLytic-Mlysis/extraction reagent(Sigma,MO)並依據使用說明補充protease inhibitors、Leupeptin、TLCK、TAME及PMSF。之後細胞至於室溫中用shaker混勻15分鐘後將細胞刮入試管中並用12000xg之轉速離心5分鐘將細胞殘渣沉澱,並將具有蛋白質之細胞萃取液收集並儲存在-70℃以待使用。並利用SOFmax software package在E-max microplate reader(Molecular Devices,Sunnyvale,CA)將蛋白定量。每30μg之細胞萃取物被加入SDS-PAGE sample buffer(有還原或未還原50mM DTT)並將上述樣本煮沸3分鐘,再將樣本注入8% polyacylamide gels之前,先將2~3μl protein marker(Bio-Rad)注入其中。而SDS-polyacrylamide gel electrophoresis是依據標準程序來執行(Molecular Cloning,3rd ED)。蛋白層析後經由電轉漬(electroblotting)法將蛋白質吸附在nitrocellulose membrane上並用Odyssey blocking reagent(Li-Cor Biosciences,Lincoln,NB)在室溫作用1~2小時。並利用抗體primary antibody直接對特定蛋白(EGFP(1:5,000;JL-8,BD),RGFP(1:10,000;BD),Tyr(1:2,000;Santa Crutz),or Hyal(1:2,000;Santa Crutz))標定,於4℃作用整晚。接著用TBS-T buffer洗三次,並再以secondary antibody作用此nitrocellulose membrane(goat anti-mouse IgG conjugate with Alexa Fluor 680 reactive dye(1:2,000;Molecular Probes)),室溫 作用一小時後再用TBS-T buffer洗三次後進行呈像並用Li-Cor Odyssey Infrared Imager及Odyssey Softeare v.10(Li-Cor)紀錄影像。 For immunoblotting of specific proteins, the isolated cell strain from which the culture solution was removed was subjected to ice PBS wipe, and the protease inhibitors, Leupeptin, TLCK, TAME, and PMSF were supplemented with CelLytic-Mlysis/extraction reagent (Sigma, MO) according to the instructions. After the cells were mixed with a shaker for 15 minutes at room temperature, the cells were scraped into a test tube and the cell residue was precipitated by centrifugation at 12000 x g for 5 minutes, and the cell extract containing the protein was collected and stored at -70 ° C until use. Proteins were quantified using an SOFmax software package on an E-max microplate reader (Molecular Devices, Sunnyvale, CA). Each 30 μg of cell extract was added to SDS-PAGE sample buffer (with or without reduction of 50 mM DTT) and the sample was boiled for 3 minutes. Before injecting the sample into 8% polyacylamide gels, 2~3 μl of protein marker (Bio-) Rad) is injected into it. SDS-polyacrylamide gel electrophoresis is performed according to standard procedures (Molecular Cloning, 3rd ED). After protein chromatography, the protein was adsorbed onto a nitrocellulose membrane by electroblotting and incubated with Odyssey blocking reagent (Li-Cor Biosciences, Lincoln, NB) for 1 to 2 hours at room temperature. And use the antibody primary antibody to directly target specific proteins (EGFP (1: 5,000; JL-8, BD), RGFP (1: 10,000; BD), Tyr (1: 2,000; Santa Crutz), or Hyal (1: 2,000; Santa) Crutz)) Calibration, acting overnight at 4 °C. Then washed three times with TBS-T buffer, and then treated with nitrocellulose membrane (goat anti-mouse IgG conjugate with Alexa Fluor 680 reactive dye (1:2,000; Molecular Probes)) at room temperature. After one hour of action, the cells were washed three times with TBS-T buffer and imaged and images were recorded with Li-Cor Odyssey Infrared Imager and Odyssey Softeare v. 10 (Li-Cor).

實施例六於斑馬魚中內含子之核醣核酸基因靜默效應(Intronic RNA-mediated Gene Silencing)Example 6 Intronic RNA-mediated Gene Silencing in Introns of Zebrafish

將此株Tg(actin-GAL4:UAS-gfp)斑馬魚幼魚養在具有10ml 0.2x serum-free RPMI 1640培養液之容器中以待轉染,在轉染時先將60μl FuGene liposomal transfection reagent(Roche Biochemicals,Indianapolis,IN)與1ml 1x serum-free RPMI 1640培養液混合。再將具有與不具有anti-EGFP pre-miRNA insert之SpRNAi-RGFP載體如實施例一與二所述之方式混合,最後與上述混合之培養液混合以進行轉染,並將該混合液置於冰上30分鐘後直接放入斑馬魚幼魚之容器中,所有三個劑量係由12小時間隔開來(全部60μg),並待轉染後60小時候收集樣本並觀察。 This strain of Tg ( actin- GAL4: UAS-gfp) zebrafish juvenile was raised in a container with 10 ml of 0.2x serum-free RPMI 1640 medium for transfection, and 60 μl of FuGene liposomal transfection reagent (Roche) was first transfected. Biochemicals, Indianapolis, IN) was mixed with 1 ml of 1x serum-free RPMI 1640 medium. The SpRNAi-RGFP vector having no anti- EGFP pre-miRNA insert was mixed as described in Examples 1 and 2, and finally mixed with the above mixed culture solution for transfection, and the mixture was placed. After 30 minutes on ice, they were placed directly into the container of zebrafish juveniles. All three doses were separated by 12 hours (all 60 μg), and samples were collected and observed at 60 hours after transfection.

實施例七in vivo老鼠皮膚內含子之mir-434-5p及miR-Tyr-mediated基因靜默效應(Intronic mir-434-5p and miR-Tyr-mediated Gene Silencing)Example 7 mir-434-5p and miR-Tyr-mediated Gene Silencing of in vivo mouse skin introns (Intronic mir-434-5p and miR-Tyr-mediated Gene Silencing)

白化皮膚斑駁之黑色素剔除老鼠(W-9 black strain)係被連續皮下注射單離之具有mir-434-5p pre-miRNA insert(介子)之SpRNAi-RGFP表現載體四天(總共劑量約200μg)或藉由直接皮膚注入liposome-encapsulated之具有miR-Tyr pre-miRNA之 SpRNAi-RGFP表現載體每天兩次持續六天(總共劑量約240μg)。為了產生具有native mir-434-5p pre-miRNA介子(insert)之SpRNAi-RGFP表現載體,利用如實施例二所述,除了不使用合成之mir-434-5p pre-miRNA當內含子之介子(intronic insert)(5’-GTCCGATCGT CUCGACUCUG GGUUUGAACC AAAGCUCGAC UCAUGGUUUG AACCAUUACU UAAUUCGUGG UUUGAACCAU CACUCGACUC CUGGUUCGAA CCAUCCGACG CGTCAT-3’(SEQ.ID.NO.25))。為了更有效率地將載體轉染入特定組織,載體係與FuGene liposomal transfection reagent(Roche,IN)混合如實施例三及六所述之混合方式形成。 Albino skin mottled melanin knockout mice (W-9 black strain) were serially injected subcutaneously with SpRNAi-RGFP expression vector with mir-434-5p pre-miRNA insert (meson) for four days (a total dose of about 200 μg) or The liposome-encapsulated SpRNAi-RGFP expression vector with miR-Tyr pre-miRNA was injected twice daily for six days (a total dose of about 240 μg). To generate a SpRNAi-RGFP expression vector with a native mir-434-5p pre-miRNA meson, use as described in Example 2, except that the synthetic mir-434-5p pre-miRNA is not used as an intron meson (intronic insert) (5'-GTCCGATCGT CUCGACUCUG GGUUUGAACC AAAGCUCGAC UCAUGGUUUG AACCAUUACU UAAUUCGUGG UUUGAACCAU CACUCGACUC CUGGUUCGAA CCAUCCGACG CGTCAT-3' (SEQ.ID.NO.25)). To more efficiently transfect the vector into a particular tissue, the carrier was mixed with FuGene liposomal transfection reagent (Roche, IN) as described in Examples 3 and 6.

實施例八在人類皮膚之intronic miR-Tyr-mediated基因靜默效應Example 8: Intronic miR-Tyr-mediated gene silencing effect in human skin

為了有效將載體轉染進入人體皮膚層中,1μg/ml SpRNAi-RGFP載體溶液可藉由100μg載體溶於1ml之autoclaved ddH2O之溶液與99ml之100% DNase-free glycerin or glycerol混合而成。DNase-free glycerin被用來使miR-Tyr形成囊套狀以利載體深入細胞深層傳送。因此,利用此方式將一發明者之左手臂直接塗覆上2ml之上述具有miR-Tyr之混合液(手臂右側)及無miR-Tyr混合液2ml於手臂左側,兩天之後結果發現,的確具有miR-Tyr之混合液處理之手臂較為白皙,也進一步證實其於人體皮膚之功效。 In order to efficiently transfect the vector into the human skin layer, the 1 μg/ml SpRNAi-RGFP vector solution can be prepared by mixing 100 μg of the carrier in 1 ml of autoclaved ddH 2 O with 99 ml of 100% DNase-free glycerin or glycerol. DNase-free glycerin is used to form miR-Tyr into a sac-like shape to facilitate transport of the vector deep into the cell. Therefore, in this way, the inventor's left arm was directly coated with 2 ml of the above mixture with miR-Tyr (right side of the arm) and 2 ml of no miR-Tyr mixture on the left side of the arm. Two days later, it was found that The arm treated with the miR-Tyr mixture is more white, which further confirms its efficacy on human skin.

實施例九Immunocytochemical(ICC)Staining AssayExample 9 Immunocytochemical (ICC) Staining Assay

一化學免疫染色試驗組(Imgenex San Diego,CA)及根據製造使用說明。樣本切片先在PBS中潤拭三次再泡入Zeller’s solution(10 mM Tris,100 mM MgCl2,5% fetal calf serum,1% BSA and 0.5% Tween-20,pH 7.4)浸泡30分鐘,接著將樣本切片泡在primary antibody(使用Zeller’s solution稀釋)整晚並存放於4℃冰箱中,隔天將切片使用TBST沖洗參次並泡在secondary antibody兩小時後,此時是以biotinylated goat anti-rabbit or horse anti-mouse antibody為secondary antibody(Chemicon,Temecula,CA)。再用TBST洗樣本切片一次後用streptavidin-HRP當tertiary antibody並用DAB substrate使其呈色。用100x顯微鏡並以100x及400x(TE2000 inverted microscopic quantitation system)觀察結果。 A chemical immunostaining test group (Imgenex San Diego, CA) and instructions for manufacturing use. The sample sections were first immersed in PBS three times and soaked in Zeller's solution (10 mM Tris, 100 mM MgCl 2 , 5% fetal calf serum, 1% BSA and 0.5% Tween-20, pH 7.4) for 30 minutes, then the sample was taken. The sections were immersed in a primary antibody (diluted with Zeller's solution) overnight and stored in a 4 °C freezer. The next day, the sections were washed with TBST and soaked in the secondary antibody for two hours, at this time biotinylated goat anti-rabbit or horse The anti-mouse antibody is a secondary antibody (Chemicon, Temecula, CA). The samples were washed once with TBST and then stained with streptavidin-HRP as the tertiary antibody and colored with a DAB substrate. The results were observed with a 100x microscope and at 100x and 400x (TE2000 inverted microscopic quantitation system).

實施例十 生物晶片分析(Microarray Analysis)Example 10 Microarray Analysis

為了準備標定好之探針(probe)以用來與生物晶片上的基因雜交,將萃取出來之全部核醣核酸(2μg)轉變成雙股cDNA,並使用Superscript Choice system kit(Gibco/BRL,Gaithersburg,MD)及修飾後之oligh(dT)24-T7啟動子引子(promoter primer)如5'-GGCCAGTGAA TTGTAATACG ACTCACTATA GGGAGGCGG-(dT)24-3',接續步驟如同其使用者說明步驟。將雙股cDNAs用酚/氯仿(phenol/chloroform)萃取出來後,利用乙醇將之沉澱並再回溶至0.5 μg/μl in diethyl pyrocarbonate (DEPC)-treated ddH2O。而Phase-Lock Gel(5'Prime→3'Prime,Inc.,Boulder,CO)可被用來增加萃取率。而in vitro轉錄可用T7核醣核酸聚合酶與1 μg of cDNA,7.5 mM unlabeled ATP and GTP,5 mM unlabeled UTP和CTP及2 mM biotin-labeled CTP及UTP(biotin-11-CTP,biotin-16-UTP,Enzo Diagnostics)共同反應於37℃ 4小時產生cRNA,接著cRNA利用RNeasy spin columns(Qiagen,CA)純化,再用1%之agarose gel來證實其尺寸大小,接著加熱到94℃ 35分鐘於40 mM Tris-acetate,pH 8.0,100 mM KOAc/30 mM MgOAc使cRNA隨機被分解成大小約50個核苷酸大小。 In order to prepare a well-targeted probe for hybridization with a gene on a biochip, the extracted whole ribonucleic acid (2 μg) was converted into a double-stranded cDNA using a Superscript Choice system kit (Gibco/BRL, Gaithersburg, MD) and modified oligh (dT) 24 -T7 promoter primer such as 5'-GGCCAGTGAA TTGTAATACG ACTCACTATA GGGAGGCGG-(dT) 24 -3', the subsequent steps are as described by the user. After the double-stranded cDNAs were extracted with phenol/chloroform, they were precipitated with ethanol and re-dissolved to 0.5 μg/μl in diethyl pyrocarbonate (DEPC)-treated ddH 2 O. Phase-Lock Gel (5'Prime→3' Prime, Inc., Boulder, CO) can be used to increase the extraction rate. In vitro transcription can be obtained with T7 ribonucleic acid polymerase with 1 μg of cDNA, 7.5 mM unlabeled ATP and GTP, 5 mM unlabeled UTP and CTP and 2 mM biotin-labeled CTP and UTP (biotin-11-CTP, biotin-16-UTP , Enzo Diagnostics) co-reacted to generate cRNA at 37 ° C for 4 hours, then cRNA was purified using RNeasy spin columns (Qiagen, CA), and then confirmed by 1% agarose gel, followed by heating to 94 ° C for 35 minutes at 40 mM Tris-acetate, pH 8.0, 100 mM KOAc/30 mM MgOAc allowed the cRNA to be randomly broken down to a size of approximately 50 nucleotides.

利用四個核苷酸一組之生物晶片(GeneChip U133A&B arrays,Affymetrix,Santa Clara,CA),其中總共包含32668個基因可用來進行雜交,雜交反應係於200μl之AFFY buffer(Affymetrix)40℃ 16小時連續攪動下完成。在雜交反應完成後,生物晶片用200 μl之6x SSPE-T buffer(1x 0.25 M sodium chloride/15 mM sodium phosphate,pH 7.6/1 mM EDTA/0.005% Triton)潤拭3次並接著用200 μl之6x SSPE-T緩衝液於50℃洗一小時,接著用0.5X SSPE-T潤拭兩次及0.5x SSPE-T於50℃沖洗15分鐘,之後用2 μg/ml streptavidin-phycoerythrin(Molecular Probes)及1 mg/ml acetylated BSA(Sigma)in 6x SSPE-T(pH 7.6)進行染色後,將生物晶片置入confocal scanner(Molecular Dynamics)進行判讀並以Affymetrix Microarray Suite version 4.0 software進行分析。藉由perfectly matched探針與mismatched探針之平均差將樣本標準化(normalize)後,收集訊號差大於兩倍之訊號。 A four-nucleotide biochip (GeneChip U133A&B arrays, Affymetrix, Santa Clara, CA) was used, which contained a total of 32,668 genes for hybridization, and the hybridization reaction was carried out in 200 μl of AFFY buffer (Affymetrix) at 40 ° C for 16 hours. Complete with continuous agitation. After completion of the hybridization reaction, the biochip was swabbed with 200 μl of 6x SSPE-T buffer (1 x 0.25 M sodium chloride/15 mM sodium phosphate, pH 7.6/1 mM EDTA/0.005% Triton) and then with 200 μl. Wash 6x SSPE-T buffer at 50 ° C for one hour, then rinse twice with 0.5X SSPE-T and 0.5x SSPE-T at 50 ° C for 15 minutes, then use 2 μg / ml streptavidin-phycoerythrin (Molecular Probes) After staining with 1 mg/ml acetylated BSA (Sigma) in 6x SSPE-T (pH 7.6), the biochip was placed in a confocal scanner (Molecular Dynamics) for interpretation and Affymetrix Microarray Suite version 4.0 software for analysis. After normalizing the sample by the average difference between the perfectly matched probe and the mismatched probe, a signal with a signal difference greater than twice is collected.

實施例十一 統計分析Example 11 Statistical analysis

生物晶片結果係被呈現為平均值±SE。這些樣本資料之統計分析藉由one-way ANOVA方式計算,當具有統計上顯著差異時,Dunnett’s post-hoc test被用來辨認與標準具有差異之樣本組。為了在兩組之間進行比對,two-tailed sudent t test係被使用。為了比對超過兩組,ANOVA藉由post-hoc multiple range test來進行比對,或然率值p<0.05被認定為具有統計上的意義,所有p值是藉由two-tailed test來決定。 Biochip results were presented as mean ± SE. Statistical analysis of these sample data was calculated by one-way ANOVA. When there were statistically significant differences, Dunnett's post-hoc test was used to identify sample groups that differed from the standard. In order to compare between the two groups, a two-tailed sudent t test was used. For comparison over two groups, ANOVA was aligned by post-hoc multiple range test, and the probability value p < 0.05 was considered to be statistically significant, all p values were determined by two-tailed test.

圖1為本發明之細胞內內含子之微核醣核酸(intronic mircoRNA,miRNA)生成機制。 Figure 1 is a diagram showing the mechanism of intronic mircoRNA (miRNA) production in the intracellular intron of the present invention.

圖2為顯示siRNA、exonic(intergenic)microRNA及intronic microRNA路徑機制。 Figure 2 shows the siRNA, exonic (intergenic) microRNA and intronic microRNA pathway mechanisms.

圖3A到3D為本發明較佳實施例之SpRNAi-RGFP重組基因結構成分(圖3A)及其原理(圖3B)以產生一模仿內含子之微核醣核酸(intronic miRNA)之人造微核醣核酸。細胞內測試SpRNAi-RGFP表現載體直接於斑馬魚中抑制綠色螢光蛋白顯示在綠色螢光蛋白基因有超過85%基因剔除效應,並由Western blot analysis證實。而具有能靜默綠色螢光蛋白之 內含子之微核醣核酸(intronic miRNA)及其剪接先驅物能經由1% formaldhyde agarose gel電泳並於Northern blot analysis後被觀察到。 3A to 3D are diagrams showing the structural components of the SpRNAi-RGFP recombinant gene (Fig. 3A) and its principle (Fig. 3B) to produce an artificial microRNA of an intronic miRNA mimicking an intron. . Intracellular assays The SpRNAi-RGFP expression vector inhibits green fluorescent protein directly in zebrafish and shows more than 85% knockout effect on the green fluorescent protein gene, as confirmed by Western blot analysis. Intronic miRNAs and their splicing precursors with inactive introns of green fluorescent protein can be visualized by 1% formaldhyde agarose gel electrophoresis and after Northern blot analysis.

圖4A到4C顯示本發明之於SpRNAi-RGFP結構中不同設計之內含子之核醣核酸介子(intronic RNA insert)以用來有效率的微核醣核酸形成,及於斑馬魚中有效率地產生綠色螢光蛋白靜默效應,證實了在5’-miRNA*-stemloop-miRNA-3’[1]與5’-miRNA-stemloop-miRNA*-3’[2]hairpin RNA之間之於RISC複合物不對稱之偏好(圖4A)。in vivo基因靜默只在轉染先驅微核醣核酸結構[2]中發現,而不是在轉染結構[1]中被發現,而證實其偏好。因綠色螢光蛋白與紅色螢光蛋白的顏色重疊後會呈現紅色大於綠色如圖所顯現之深橘色,因此綠色螢光蛋白的量是遠低於紅色螢光蛋白於先驅微核醣核酸結構[2]轉染組,此時載體之指標紅色螢光蛋白則是平均表現地(圖4B)。用Western blot分析綠色螢光蛋白之量,證實在轉染先驅微核醣核酸結構組[2]中具有明顯的基因靜默效應(圖4C)。在其他實驗組例如Liposome only、無任何介子之空載體組(Vctr)以及siRNA(siR)組皆無基因靜默效應出現。 Figures 4A through 4C show the intronic RNA inserts of the different introns of the SpRNAi-RGFP construct of the present invention for efficient microRNA formation and efficient green production in zebrafish. Fluorescent protein silencing effect confirms that the RISC complex is not between 5'-miRNA*-stemloop-miRNA-3'[ 1 ] and 5'-miRNA-stemloop-miRNA*-3'[ 2 ]hairpin RNA Symmetrical preference (Figure 4A). In vivo gene silencing was only found in transfected precursor microRNA structures [ 2 ], rather than in transfected structures [ 1 ], confirming their preference. Because the color of green fluorescent protein and red fluorescent protein overlap, the red color is larger than the dark orange color as shown in the figure, so the amount of green fluorescent protein is much lower than that of red fluorescent protein in the precursor microRNA structure [ 2 ] The transfection group, at this time the indicator of the vector red fluorescent protein is the average performance (Fig. 4B). Analysis of the amount of green fluorescent protein by Western blot confirmed that there was a significant gene silencing effect in the transfected precursor microRNA structural group [ 2 ] (Fig. 4C). No gene silencing effect occurred in other experimental groups such as Liposome only, empty vector group without any meson (Vctr), and siRNA (siR) group.

圖5為本發明之能利用細胞內經由mir-434對酪胺酸酶基因產生於老鼠皮膚去除色素之基因靜默效應。 Fig. 5 is a diagram showing the gene silencing effect of the present invention which utilizes intracellular tyrostinase gene production in mice to remove pigment by mir-434.

圖6為本發明之人造miR-Tyr介子(insert)表現於老鼠皮膚而 產生一專一性之酪胺酸酶基因靜默效應。 Figure 6 is an artificial miR-Tyr meson of the present invention expressed on mouse skin A specific tyrosinase gene silencing effect is produced.

圖7A到7C為本發明利用miR-Tyr介子(insert)在人類手臂皮膚(圖7A)及前驅(primary)皮膚培養細胞(圖7B及C)上超過50%之酪胺酸酶基因靜默效應。 Figures 7A through 7C illustrate the silencing effect of the tyrosinase gene of more than 50% on the human arm skin (Figure 7A) and the primary skin culture cells (Figures 7B and C) using the miR-Tyr meson.

圖8A到8C為本發明之人造抗酪胺酸酶之先驅微核醣核酸(pre-miRNA)轉染之皮膚細胞株之基因晶片分析(Affymetrix human GeneChip U133A & B,CA),顯示本發明為專一性比一般miRNA還高之基因靜默效應物(gene silencing effector)如mir-434。 8A to 8C are gene chip analysis (Affymetrix human GeneChip U133A & B, CA) of a precursor ribonuclease (pre-miRNA) transfected skin cell line of artificial tyrosinase of the present invention, showing that the present invention is specific A gene silencing effector such as mir-434, which is higher than a general miRNA.

<110> 美洛生物科技有限股份公司 <110> Meiluo Biotechnology Co., Ltd.

<120> 使用內含子之核醣核酸(intronic microRNA)技術於新穎化妝品設計與產品 <120> Using intronic microRNA technology for novel cosmetic designs and products

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<400> 25 <400> 25

Claims (54)

一種產生藉由基因靜默效應用於皮膚維護之化妝品的方法,包含以下步驟:a.建構一基因重組核苷酸(recombinant nucleotide),其中該基因重組核苷酸包含至少一內含子(intron),該內含子具有一內含子之介子(intronic insert),該內含子之介子編碼一基因靜默效應物(gene silencing effector),誘發核醣核酸介導之基因靜默效應(RNA-mediated gene silencing);該基因靜默效應物之序列係自mir-434微核糖核酸(microRNA,miRNA)之序列再設計而得,其中該mir-434微核糖核酸之先驅物(pre-miRNA)之序列包含SEQ.ID.NO.25;以及b.將該基因重組核苷酸裁接(cloning)進入一載體(vector);其中,該內含子透過人類細胞內之一內含子切除機制(intron excision mechanism)自該基因重組核苷酸之至少一前驅核醣核酸(primary RNA)分離,以致於產生該基因靜默效應物以靜默酪胺酸酶(tyrosinase)及/或透明質酸酶(hyaluronidase)基因的表現。 A method of producing a cosmetic for skin maintenance by a gene silencing effect, comprising the steps of: a. constructing a recombinant nucleotide, wherein the recombinant nucleotide comprises at least one intron The intron has an intronic insert, the intron of which encodes a gene silencing effector, and induces a ribonucleic acid-mediated gene silencing effect (RNA-mediated gene silencing). The sequence of the gene silencing effector is redesigned from the sequence of mir-434 microRNA (miRNA), wherein the sequence of the mir-434 microribonucleic acid precursor (pre-miRNA) comprises SEQ. ID.NO.25; and b. cloning the recombinant nucleotide into a vector; wherein the intron passes through an intron excision mechanism in the human cell Separating at least one precursor RNA from the recombinant nucleotide of the gene such that the gene silencing effector is produced to silence the tyrosinase and/or hyaluronidase genes . 如申請專利範圍第1項所述之產生用於皮膚維護之製成品的方法,其中該內含子係被一外顯子(exon)所連接,且能與該外顯子分離以誘發核醣核酸介導之基因靜默效應;該外顯子能轉譯成一蛋白質。 A method for producing a finished product for skin maintenance as described in claim 1, wherein the intron is linked by an exon and is separable from the exon to induce ribonucleic acid Mediating the silencing effect of the gene; the exon can be translated into a protein. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該人類細胞包含人類皮膚細胞。 A method of producing a cosmetic for skin maintenance by a gene silencing effect, as described in claim 1, wherein the human cell comprises human skin cells. 如申請專利範圍第2項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,進一步包含一合成該基因重組核苷酸之步驟,其中該基因重組核苷酸包含該內含子與該外顯子。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 2, further comprising a step of synthesizing the recombinant nucleotide of the gene, wherein the recombinant nucleotide comprises the intron With the exon. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因重組核苷酸係經由一去氧核醣核酸合成器(DNA synthesizer)化學合成或連接。 A method for producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 1, wherein the genetic recombinant nucleotide is chemically synthesized or linked via a DNA synthesizer. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因重組核苷酸係藉由一遺傳工程方法所連接,而該遺傳工程方法係選自於同源基因合併交換(homologous gene combination)、去氧核醣核酸接合(DNA ligation)、插入轉殖基因(transgene insertion)、轉位子傳遞(transposon delivery)、跳躍基因嵌合(jumping gene integration)、以及反轉錄病毒感染(retroviral infection)所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 1, wherein the genetic recombinant method is linked by a genetic engineering method, and the genetic engineering method is selected from the group consisting of In homologous gene combination, DNA ligation, transgene insertion, transposon delivery, jumping gene integration, and A group consisting of retroviral infections. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中至少一該內含子包含一類似小夾核醣核酸結構(hairpin-like RNA structure)。 A method of producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 1, wherein at least one of the introns comprises a hairpin-like RNA structure. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因重組核苷酸係藉由基因工程之限制酶剪切與該內含子之去氧核醣核酸接合而產生一非天然基因。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the patent application, wherein the recombinant nucleotide is cleaved by a genetically engineered restriction enzyme and deoxygenated by the intron Ribonucleic acid joins to produce a non-native gene. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因重組核苷酸係一具有該內含子之細胞本身之基因(cellular gene)。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the invention, wherein the genetic recombinant nucleotide is a cellular gene having the intron. 如申請專利範圍第9項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該細胞本身之基因係選自於病毒基因、哺乳動物基因、跳躍基因、有蛋白質編碼(protein-coding)基因、以及無蛋白質編碼(non-protein-coding)基因所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 9, wherein the gene of the cell itself is selected from the group consisting of a viral gene, a mammalian gene, a jumping gene, and a protein encoding (protein) -coding) A group of genes and non-protein-coding genes. 如申請專利範圍第9項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子係藉由遺傳工程方法嵌合進入該細胞本身之基因,而該遺傳工程方法選自於同源基因合併交換(homologous gene combination)、去氧核醣核酸接合(DNA ligation)、插入轉殖基因(transgene insertion)、轉位子傳遞(transposon delivery)、跳躍基因嵌合(jumping gene integration)、以及反轉錄病毒感染(retroviral infection)所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 9, wherein the intron is genetically engineered into a gene of the cell itself, and the genetic engineering method Selected from homologous gene combination, DNA ligation, transgene insertion, transposon delivery, jumping gene integration And a group consisting of retroviral infections. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子係一核苷酸,該核苷酸包含該具有一基因靜默效應物之該內含子之介子、一分支點區(branch point motif)、一多嘧啶區(a poly-pyrimidine tract)、一五端剪接處(5'-splice site,5'clip)以及一三端剪接處(3'-splice site,3'clip)。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 1, wherein the intron is a nucleotide comprising the gene silencing effector Introns, a branch point motif, a poly-pyrimidine tract, a 5'-splice site (5'clip), and a three-terminal splicing site (3'-splice site, 3'clip). 如申請專利範圍第1項所述之產生藉由基因靜默效應用於 皮膚維護之化妝品的方法,其中該內含子之介子(intronic insert)係一具有一基因靜默效應物(gene silencing effector)之核苷酸,而該基因靜默效應物選自於套馬索型核醣核酸(lariat-form spliced RNA)、短暫時核醣核酸(short temporary sense RNA,stRNA)、反意核醣核酸(antisense RNA,aRNA)、小夾核醣核酸(short-hairpin RNA,shRNA)、微核醣核酸(microRNA,miRNA)、核糖酵素核醣核酸(ribozyme RNA)、以及以上核醣核酸之先驅物與衍生物所組成之群組。 The production as described in item 1 of the patent application is used by the gene silencing effect A skin-maintaining cosmetic method, wherein the intronic insert is a nucleotide having a gene silencing effector, and the gene silencing effector is selected from the group consisting of a set of chromosomal ribose Lariat-form spliced RNA, short temporary sense RNA (stRNA), antisense RNA (aRNA), short-hairpin RNA (shRNA), microribonucleic acid (short-hair spliced RNA) MicroRNA, miRNA), ribozyme RNA, and a group of precursors and derivatives of the above ribonucleic acids. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子之介子(intronic insert)係一反意核苷酸包含對於欲靜默基因之序列90%到100%之序列互補率。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the patent application, wherein the intronic insert is a reverse nucleotide comprising a sequence for a gene to be silenced 90% to 100% sequence complementarity. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子之介子(intronic insert)係一類似小夾核苷酸包含對於欲靜默基因之序列30%到100%之序列互補率。 A method for producing a cosmetic for skin maintenance by a gene silencing effect, as described in claim 1, wherein the intronic insert is a similar small clip nucleotide comprising a gene for silencing The sequence has a sequence complementation rate of 30% to 100%. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子之介子(intronic insert)係一類似小夾核苷酸(hairpin-like nucleic acid)包含一環狀結構(stem-loop structure),該類似小夾核苷酸序列包含SEQ.ID.NO.1或是SEQ.ID.NO.2。 A method for producing a cosmetic for skin maintenance by a gene silencing effect, as described in claim 1, wherein the intronic insert is a hairpin-like nucleic acid. ) comprising a stem-loop structure comprising SEQ.ID.NO.1 or SEQ.ID.NO.2. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於 皮膚維護之化妝品的方法,其中該內含子之介子(intronic insert)係一類似小夾先驅微核醣核酸(hairpin-like precursor microRNA,pre-miRNA),該類似小夾先驅微核醣核酸序列包含SEQ.ID.NO.8或是SEQ.ID.NO.10。 The production as described in item 1 of the patent application is used by the gene silencing effect A skin-maintaining cosmetic method, wherein the intronic insert is a hairpin-like precursor microRNA (pre-miRNA), and the similar small clip precursor microRNA sequence comprises the SEQ .ID.NO.8 or SEQ.ID.NO.10. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因靜默效應物(gene silencing effector)係一微核醣核酸(miRNA),該微核醣核酸序列包含SEQ.ID.NO.9或是SEQ.ID.NO.11。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the invention, wherein the gene silencing effector is a microRNA (miRNA), the microribonucleic acid sequence Include SEQ.ID.NO.9 or SEQ.ID.NO.11. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子之介子(intronic insert)係併合(incorporation)入該內含子,係藉由至少一限制酶切位(restriction site)來進行併合,而限制酶切位選自於AatII、AccI、AflII/III、AgeI、ApaI/LI、AseI、Asp718I、BamHI、BbeI、BclI/II、BglII、BsmI、Bsp120I、BspHI/LU11I/120I、BsrI/BI/GI、BssHII/SI、BstBI/U1/XI、ClaI、Csp6I、DpnI、DraI/II、EagI、Ecl136II、EcoRI/RII/47III、EheI、FspI、HaeIII、HhaI、HinPI、HindIII、HinfI、HpaI/II、KasI、KpnI、MaeII/III、MfeI、MluI、MscI、MseI、NaeI、NarI、NcoI、NdeI、NgoMI、NotI、NruI、NsiI、PmlI、Ppu10I、PstI、PvuI/II、RsaI、SacI/II、SalI、Sau3AI、SmaI、SnaBI、SphI、SspI、StuI、TaiI、TaqI、XbaI、XhoI、以及XmaI所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 1, wherein the intronic insert is incorporation into the intron by At least one restriction site is used for the merging, and the restriction sites are selected from the group consisting of AatII, AccI, AflII/III, AgeI, ApaI/LI, AseI, Asp718I, BamHI, BbeI, BclI/II, BglII, BsmI, Bsp120I, BspHI/LU11I/120I, BsrI/BI/GI, BssHII/SI, BstBI/U1/XI, ClaI, Csp6I, DpnI, DraI/II, EagI, Ecl136II, EcoRI/RII/47III, EheI, FspI, HaeIII, HhaI, HinPI, HindIII, HinfI, HpaI/II, KasI, KpnI, MaeII/III, MfeI, MluI, MscI, MseI, NaeI, NarI, NcoI, NdeI, NgoMI, NotI, NruI, NsiI, PmlI, Ppu10I, A group consisting of PstI, PvuI/II, RsaI, SacI/II, SalI, Sau3AI, SmaI, SnaBI, SphI, SspI, StuI, TaiI, TaqI, XbaI, XhoI , and XmaI . 如申請專利範圍第12項所述之產生藉由基因靜默效應用於 皮膚維護之化妝品的方法,其中該分支點區(branch point motif)包含一分支點(branch point),而該分支點係一腺核苷(adenosine,A)並位於一包含SEQ.ID.NO.5序列之核苷酸序列。 The production as described in item 12 of the patent application is used by the gene silencing effect A skin-maintaining cosmetic method, wherein the branch point motif comprises a branch point, and the branch point is an adenosine (A) and is located in a SEQ. ID. NO. 5 nucleotide sequence of the sequence. 如申請專利範圍第12項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該分支點區包含一分支點,而該分支點係一腺核苷(adenosine,A)並位於一核苷酸序列包含5’-TACTAAC-3’。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 12, wherein the branching point region comprises a branching point, and the branching point is an adenosine (A) and Located in a nucleotide sequence comprising 5'-TACTAAC-3'. 如申請專利範圍第12項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該多嘧啶區是一具有許多胸腺嘧啶(Thymine)與胞嘧啶(Cytosine)之核苷酸序列,該多嘧啶區之核苷酸序列包含SEQ.ID.NO.6與SEQ.ID.NO.7。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 12, wherein the polypyrimidine region is a nucleotide sequence having a plurality of thymine and Cytosine The nucleotide sequence of the polypyrimidine region comprises SEQ.ID.NO.6 and SEQ.ID.NO.7. 如申請專利範圍第12項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該五端剪接處係一核苷酸序列且其包含SEQ.ID.NO.3。 A method of producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 12, wherein the five-terminal splicing is a nucleotide sequence and comprises SEQ.ID.NO.3. 如申請專利範圍第12項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該五端剪接處係一核苷酸序列且其包含5’-GTAAG-3’。 A method of producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 12, wherein the five-terminal splicing is a nucleotide sequence and comprises 5'-GTAAG-3'. 如申請專利範圍第12項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該三端剪接處係一核苷酸序列且其包含SEQ.ID.NO.4。 A method of producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 12, wherein the three-terminal splicing is a nucleotide sequence and comprises SEQ.ID.NO.4. 如申請專利範圍第12項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該三端剪接處係一核苷酸序列 且其包含5’-CTGCAG-3’。 a method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 12, wherein the three-terminal splicing is a nucleotide sequence And it contains 5'-CTGCAG-3'. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該載體係一表現載體,該載體選自於質體(plasmid)、柯斯盾粒(cosmid)、噬菌粒(phagmid)、酵母人工染色體(yeast artificial chromosome)、轉殖基因(transgene)、轉位子(transposon)、反轉位子(retrotransposon)、跳躍基因、以及病毒載體所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 1, wherein the carrier is a performance carrier selected from the group consisting of a plasmid and a cosmid. ), a group consisting of phagmid, yeast artificial chromosome, transgene, transposon, retrotransposon, jumping gene, and viral vector. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該載體包含至少一病毒或第二型核醣核酸聚合酶啟動子、Kozak轉譯起始處(Kozak consensus translation initiation site)、多腺苷酸化作用信號(polyadenylation signals)以及複數個限制酶切位。 A method of producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 1, wherein the vector comprises at least one virus or a second type ribonucleic acid polymerase promoter, Kozak translation start (Kozak The consensus translation initiation site), polyadenylation signals, and a plurality of restriction enzyme cleavage sites. 如申請專利範圍第28項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該病毒啟動子包含細胞巨大病毒啟動子(cytomegalovirus,CMV promoter)、逆轉錄病毒長末端序列啟動子(retrovirus long-terminal region(LTR)promoter)、B型肝炎病毒啟動子(hepatitis B virus,HBV)、腺病毒啟動子(adenovirus AMV promoter)、腺相關病毒啟動子(adeno-associated virus(AAV)promoter)以及植物相關花葉病毒(plant-associated mosaic virus)啟動子. A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 28, wherein the viral promoter comprises a cytomegalovirus (CMV promoter), and a retroviral long terminal sequence is initiated. (retrovirus long-terminal region (LTR) promoter), hepatitis B virus (HBV), adenovirus AMV promoter, adeno-associated virus (AAV) Promoter) and plant-associated mosaic virus promoter. 如申請專利範圍第28項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該等限制酶切位之限制酶係選 自於AatII、AccI、AflII/III、AgeI、ApaI/LI、AseI、Asp718I、BamHI、BbeI、BclI/II、BglII、BsmI、Bsp120I、BspHI/LU11I/120I、BsrI/BI/GI、BssHII/SI、BstBI/U1/XI、ClaI、Csp6I、DpnI、DraI/II、EagI、Ecl136II、EcoRI/RII/47III、EheI、FspI、HaeIII、HhaI、HinPI、HindIII、HinfI、HpaI/II、KasI、KpnI、MaeII/III、MfeI、MluI、MscI、MseI、NaeI、NarI、NcoI、NdeI、NgoMI、NotI、NruI、NsiI、PmlI、Ppu10I、PstI、PvuI/II、RsaI、SacI/II、SalI、Sau3AI、SmaI、SnaBI、SphI、SspI、StuI、TaiI、TaqI、XbaI、XhoI、以及XmaI所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 28, wherein the restriction enzyme cleavage restriction enzyme is selected from the group consisting of AatII, AccI, AflII/III, AgeI, ApaI. /LI, AseI, Asp718I, BamHI, BbeI, BclI/II, BglII, BsmI, Bsp120I, BspHI/LU11I/120I, BsrI/BI/GI, BssHII/SI, BstBI/U1/XI, ClaI, Csp6I, DpnI, DraI /II, EagI, Ecl136II, EcoRI/RII/47III, EheI, FspI, HaeIII, HhaI, HinPI, HindIII, HinfI, HpaI/II, KasI, KpnI, MaeII/III, MfeI, MluI, MscI, MseI, NaeI, NarI , NcoI, NdeI, NgoMI, NotI, NruI, NsiI, PmlI, Ppu10I, PstI, PvuI/II, RsaI, SacI/II, SalI, Sau3AI, SmaI, SnaBI, SphI, SspI, StuI, TaiI, TaqI, XbaI, XhoI And the group of XmaI . 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該載體進一步包含一pUC複製起始子(origin of replication)、一於原核細胞具有表現至少一抗抗生素基因(antibiotic resistance gene)之SV40 early啟動子以及一於哺乳細胞中之任意(optional)SV40複製起始子。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the invention, wherein the vector further comprises a pUC origin of replication, and the prokaryotic cell has at least one The SV40 early promoter of the antibiotic resistance gene and an optional SV40 replication initiator in the mammalian cell. 如申請專利範圍第31項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該抗抗生素基因係可對抗選自於青黴素G(penicillin G)、安比西林(ampicillin)、新黴素(neomycin)、巴龍黴素(paromycin)、康黴素(kanamycin)、鏈黴素(streptomycin)、紅黴素(erythromycin)、斯派克黴素(spectromycin)、霍火黴素(phophomycin)、四環素(tetracycline)、利福黴素(rifapicin)、兩性黴素B(amphotericin B)、健他黴素(gentamycin)、氯黴素(chloramphenicol)、頭孢黴素(cephalothin)、 泰黴素(tylosin)、以及G418所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 31, wherein the antibiotic-resistant gene line is resistant to penicillin G, penicillin, new Neomycin, paromycin, kanamycin, streptomycin, erythromycin, spectromycin, phophomycin , tetracycline, rifapicin, amphotericin B, gentamycin, chloramphenicol, cephalothin, A group consisting of tylosin and G418. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該載體藉由基因轉染方法轉染進入該人類細胞,而該基因轉染方法選自於脂質體轉染法(liposomal transfection)、化學轉染法(chemical transfection)、化學轉形法(chemical transformation)、電穿孔法(electroporation)、同源基因合併交換(homologous recombination)、轉位子傳遞法(transposon insertion)、跳躍基因轉染法(jumping gene transfection)、病毒感染法(viral infection)、微注射法(micro-injection)、以及基因槍法(gene-gun penetration)所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to claim 1, wherein the vector is transfected into the human cell by a gene transfection method, and the gene transfection method is selected from the group consisting of Liposomal transfection, chemical transfection, chemical transformation, electroporation, homologous recombination, transposon delivery Transposon insertion), jumping gene transfection, viral infection, micro-injection, and gene-gun penetration. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因重組核苷酸之前驅核醣核酸是由轉錄系統所產生,而該轉錄系統選自於第二型轉錄系統(Pol-II)、第一型轉錄系統(Pol-I)以及病毒轉錄系統所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the invention, wherein the genetically modified nucleotide precursor nucleic acid is produced by a transcription system selected from the group consisting of A group consisting of a second type of transcription system (Pol-II), a first type of transcription system (Pol-I), and a viral transcription system. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因重組核苷酸之前驅核醣核酸包含訊息核醣核酸(mRNA)、異質核核醣核酸(hnRNA)、核醣體核醣核酸(rRNA)、轉介核醣核酸tRNA、snoRNA、小胞核核醣核酸(snRNA)、先驅微核醣核酸(pre-miRNA)、病毒核醣核酸(viral RNA)以及以上核醣核酸之衍生物及先驅物。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the invention, wherein the genetically modified nucleotide precursor nucleic acid comprises a message ribonucleic acid (mRNA), a heteronuclear ribonucleic acid (hnRNA) ), ribosomal ribonucleic acid (rRNA), transduction ribonucleic acid tRNA, snoRNA, small nuclear RNA (snRNA), precursor micro-ribonucleic acid (pre-miRNA), viral ribonucleic acid (viral RNA) and derivatives of the above ribonucleic acid Things and precursors. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該內含子切除機制選自於核醣核酸剪接系統、以及無義介導降解(nonsense-mediated decay(NMD))系統所組成之群組。 A method for producing a cosmetic for skin maintenance by a gene silencing effect as described in claim 1, wherein the intron excision mechanism is selected from the group consisting of a ribonucleic splicing system and nonsense-mediated decay (nonsense-mediated decay) (NMD)) A group of systems. 如申請專利範圍第1項所述之產生藉由基因靜默效應用於皮膚維護之化妝品的方法,其中該基因靜默效應係藉由細胞內後轉錄基因靜默(posttranscriptional gene silencing)、核醣核酸干擾(RNA interference)或NMD系統作用而產生。 A method for producing a cosmetic for skin maintenance by a gene silencing effect according to the first aspect of the patent application, wherein the gene silencing effect is by posttranscriptional gene silencing, ribonucleic acid interference (RNA) Interference) or NMD system action. 一種編碼基因靜默效應物之基因重組核苷酸,包含:至少一具有一內含子之介子(intronic insert)之內含子,其中該內含子之介子編碼一基因靜默效應物(gene silencing effector)以靜默酪胺酸酶(tyrosinase)及/或透明質酸酶(hyaluronidase)基因的表現;該基因靜默效應物之序列係自mir-434微核糖核酸(microRNA,miRNA)之序列再設計而得,其中該mir-434微核糖核酸之先驅物(pre-miRNA)之序列包含SEQ.ID.NO.25。 A genetic recombinant nucleotide encoding a gene silencing effector, comprising: at least one intronic insert having an intronic insert, wherein the intron of the intron encodes a gene silencing effector Expressing the gene of tyrosinase and/or hyaluronidase; the sequence of the gene silencing effector is redesigned from the sequence of mir-434 microRNA (miRNA) , wherein the sequence of the mir-434 microribonucleic acid precursor (pre-miRNA) comprises SEQ.ID.NO.25. 如申請專利範圍第38項所述之編碼基因靜默效應物之基因重組核苷酸,進一步包含複數個外顯子,其中該內含子係被該等外顯子所連接並能被細胞中核醣核酸剪接系統(cellular RNA splicing machinery)處理而與該等外顯子分離;該等外顯子能連接而形成一具有特定功能之基因。 The recombinant nucleotide of the gene silencing effector according to claim 38, further comprising a plurality of exons, wherein the intron is linked by the exons and can be ribose in the cell The cells are separated from the exons by treatment with a cellular RNA splicing machinery; the exons can be joined to form a gene with a specific function. 如申請專利範圍第38項所述之基因重組核苷酸,進一步包 含:至少一用來連接表現該基因重組核苷酸之核醣核酸轉錄分子之表現載體之多限制酶切位(multiple restriction/cloning site);以及複數個用來形成該基因重組核苷酸之正確核醣核酸轉錄分子之轉錄與轉譯終止處(transcription and translation termination sites)。 Such as the genetic recombination nucleotide described in claim 38, further package Containing: at least one multiple restriction/cloning site for linking to a expression vector of a ribonucleic acid transcription molecule representing a recombinant nucleotide of the gene; and a plurality of corrective nucleotides for forming the gene Transcription and translation termination sites of ribonucleic acid transcriptional molecules. 如申請專利範圍第38項所述之基因重組核苷酸,其中該內含子進一步包含:一五端剪接處以及一三端剪接處;一分支點區;以及一多嘧啶區。 The genetic recombinant nucleotide according to claim 38, wherein the intron further comprises: a five-terminal splicing site and a three-terminal splicing site; a branching dot region; and a polypyrimidine region. 如申請專利範圍第38項所述之基因重組核苷酸,其中該內含子之介子(intronic insert)係一具有一基因靜默效應物核苷酸,而該基因靜默效應物選自於套馬索型核醣核酸(lariat-form spliced RNA)、短暫時核醣核酸(short temporary sense RNA,stRNA)、反意核醣核酸(antisense RNA,aRNA)、小夾核醣核酸(short-hairpin RNA,shRNA)、微核醣核酸(microRNA,miRNA)、核糖酵素核醣核酸(ribozyme RNA)、以及以上核醣核酸之先驅物與衍生物所組成之群組。 The genetically modified nucleotide according to claim 38, wherein the intronic insert has a gene silencing effector nucleotide, and the gene silencing effector is selected from the set of horses. Lariat-form spliced RNA, short temporary sense RNA (stRNA), antisense RNA (aRNA), short-hairpin RNA (shRNA), micro A group consisting of microRNAs (miRNAs), ribozyme RNAs, and precursors and derivatives of the above ribonucleic acids. 如申請專利範圍第38項所述之基因重組核苷酸,其中該內含子之介子(intronic insert)係一反意核苷酸包含對於欲靜默基 因之序列90%到100%之序列互補率。 The recombinant nucleotide of the gene according to claim 38, wherein the intronic insert is a reverse nucleotide comprising a silent base Because of the sequence 90% to 100% sequence complementarity. 如申請專利範圍第38項所述之基因重組核苷酸,其中該內含子之介子(intronic insert)係一類似小夾核苷酸包含對於欲靜默基因之序列30%到100%之序列互補率。 The genetically modified nucleotide of claim 38, wherein the intronic insert is a similar small-clustered nucleotide comprising 30% to 100% of the sequence complementary to the sequence of the gene to be silenced. rate. 如申請專利範圍第38項所述之基因重組核苷酸,其中該內含子之介子(intronic insert)係一類似小夾核苷酸(hairpin-like nucleic acid)包含一環狀結構(stem-loop structure),該類似小夾核苷酸序列包含SEQ.ID.NO.1或是SEQ.ID.NO.2。 The genetically modified nucleotide of claim 38, wherein the intronic insert is a similar hairpin-like nucleic acid comprising a circular structure (stem- Loop structure), the similar small nucleotide sequence comprises SEQ.ID.NO.1 or SEQ.ID.NO.2. 如申請專利範圍第38項所述之基因重組核苷酸,其中該內含子之介子(intronic insert)係一類似小夾先驅微核醣核酸(hairpin-like precursor microRNA,pre-miRNA),該類似小夾先驅微核醣核酸序列包含SEQ.ID.NO.8或是SEQ.ID.NO.10。 The recombinant nucleotide of the gene according to claim 38, wherein the intronic insert is a hairpin-like precursor microRNA (pre-miRNA), which is similar. The small clip pioneer microRNA sequence comprises SEQ.ID.NO.8 or SEQ.ID.NO.10. 如申請專利範圍第41項所述之基因重組核苷酸,其中該基因靜默效應物(gene silencing effector)係一微核醣核酸(miRNA),該微核醣核酸序列包含SEQ.ID.NO.9或是SEQ.ID.NO.11。 The gene recombinant nucleotide according to claim 41, wherein the gene silencing effector is a microribonucleic acid (miRNA), and the microribonucleic acid sequence comprises SEQ.ID.NO.9 or Is SEQ.ID.NO.11. 如申請專利範圍第41項所述之基因重組核苷酸,其中該分支點區包含一分支點,而該分支點係一腺核苷(adenosine,A)並位於一包含SEQ.ID.NO.5序列之核苷酸序列。 The recombinant nucleotide of claim 41, wherein the branching point region comprises a branching point, and the branching point is an adenosine (A) and is located in a SEQ. ID. NO. 5 nucleotide sequence of the sequence. 如申請專利範圍第41項所述之基因重組核苷酸,其中該該分支點區包含一分支點,而該分支點係一腺核苷並位於一核苷酸序列包含5’-TACTAAC-3’。 The recombinant nucleotide of claim 41, wherein the branching point region comprises a branching point, and the branching point is a nucleoside and the nucleotide sequence comprises 5'-TACTAAC-3 '. 如申請專利範圍第41項所述之基因重組核苷酸,其中該多嘧啶區是一具有許多胸腺嘧啶(Thymine)與胞嘧啶(Cytosine)之核苷酸序列,該多嘧啶區之核苷酸序列包含SEQ.ID.NO.6與SEQ.ID.NO.7。 The recombinant nucleotide of claim 41, wherein the polypyrimidine region is a nucleotide sequence having a plurality of thymines and Cytosine, and the nucleotide of the polypyrimidine region The sequence comprises SEQ.ID.NO.6 and SEQ.ID.NO.7. 如申請專利範圍第41項所述之基因重組核苷酸,其中該五端剪接處係一核苷酸序列且其包含SEQ.ID.NO.3。 The recombinant nucleotide of the gene according to claim 41, wherein the five-terminal splicing is a nucleotide sequence and comprises SEQ.ID.NO.3. 如申請專利範圍第41項所述之基因重組核苷酸,其中該五端剪接處係一核苷酸序列且其包含5’-GTAAG-3’。 The recombinant nucleotide of the gene according to claim 41, wherein the five-terminal splicing is a nucleotide sequence and comprises 5'-GTAAG-3'. 如申請專利範圍第41項所述之基因重組核苷酸,其中該三端剪接處係一核苷酸序列且其包含SEQ.ID.NO.4。 The recombinant nucleotide of the gene according to claim 41, wherein the three-terminal splicing is a nucleotide sequence and comprises SEQ.ID.NO.4. 如申請專利範圍第41項所述之基因重組核苷酸,其中該三端剪接處係一核苷酸序列且其包含5’-CTGCAG-3’。 The recombinant nucleotide of the gene according to claim 41, wherein the three-terminal splicing is a nucleotide sequence and comprises 5'-CTGCAG-3'.
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