SI1856295T1 - Sestavki in postopki za detektiranje virusno specifičnih nukleinskih kislin v urinu - Google Patents

Sestavki in postopki za detektiranje virusno specifičnih nukleinskih kislin v urinu

Info

Publication number
SI1856295T1
SI1856295T1 SI200631610T SI200631610T SI1856295T1 SI 1856295 T1 SI1856295 T1 SI 1856295T1 SI 200631610 T SI200631610 T SI 200631610T SI 200631610 T SI200631610 T SI 200631610T SI 1856295 T1 SI1856295 T1 SI 1856295T1
Authority
SI
Slovenia
Prior art keywords
urine
compositions
methods
nucleic acids
specific nucleic
Prior art date
Application number
SI200631610T
Other languages
English (en)
Inventor
Hovsep Melkonyan
Angela Cannas
Louis David Tomei
Samuil R. Umansky
Original Assignee
Trovagene, Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US11/137,935 external-priority patent/US7973154B2/en
Application filed by Trovagene, Inc. filed Critical Trovagene, Inc.
Priority claimed from PCT/US2006/005792 external-priority patent/WO2006089203A2/en
Publication of SI1856295T1 publication Critical patent/SI1856295T1/sl

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/686—Polymerase chain reaction [PCR]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/16—Primer sets for multiplex assays
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10S—TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10S435/00—Chemistry: molecular biology and microbiology
    • Y10S435/81—Packaged device or kit

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
SI200631610T 2005-02-17 2006-02-16 Sestavki in postopki za detektiranje virusno specifičnih nukleinskih kislin v urinu SI1856295T1 (sl)

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
IT000068A ITRM20050068A1 (it) 2005-02-17 2005-02-17 Metodo per la rivelazione di acidi nucleici di agenti patogeni batterici o di parassiti nelle urine.
US11/137,935 US7973154B2 (en) 2005-02-17 2005-05-25 Kits for diagnosis and monitoring of viral infection by analysis of viral transrenal nucleic acids in urine
PCT/US2006/005792 WO2006089203A2 (en) 2005-02-17 2006-02-16 Compositions and methods for detecting viral specific nucleic acids in urine
EP06748221A EP1856295B1 (en) 2005-02-17 2006-02-16 Compositions and methods for detecting viral specific nucleic acids in urine

Publications (1)

Publication Number Publication Date
SI1856295T1 true SI1856295T1 (sl) 2013-08-30

Family

ID=36763294

Family Applications (1)

Application Number Title Priority Date Filing Date
SI200631610T SI1856295T1 (sl) 2005-02-17 2006-02-16 Sestavki in postopki za detektiranje virusno specifičnih nukleinskih kislin v urinu

Country Status (10)

Country Link
US (1) US7803929B2 (sl)
JP (2) JP5281293B2 (sl)
CN (2) CN101253273B (sl)
CY (1) CY1114107T1 (sl)
DK (1) DK1856295T3 (sl)
ES (1) ES2410598T3 (sl)
HK (1) HK1110903A1 (sl)
IT (1) ITRM20050068A1 (sl)
PT (1) PT1856295E (sl)
SI (1) SI1856295T1 (sl)

Families Citing this family (45)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7914982B2 (en) * 2005-02-17 2011-03-29 Trovagene, Inc. Methods for detecting pathogen specific nucleic acids in urine
ITRM20050067A1 (it) * 2005-02-17 2006-08-18 Istituto Naz Per Le Malattie I Metodo per la rivelazione di acidi nucleici virali o di origine virale nelle urine.
ES2415245T5 (es) * 2007-08-22 2016-12-23 Trovagene, Inc. Métodos de uso de miARN para la detección de muerte celular in vivo
US9315802B2 (en) 2009-12-30 2016-04-19 Quest Diagnostics Investments Incorporated RNA isolation from soluble urine fractions
US20120141992A1 (en) * 2010-12-01 2012-06-07 Program For Appropriate Technology In Health Compositions and methods for trichomonas vaginalis diagnostic testing
WO2012092490A1 (en) 2010-12-30 2012-07-05 Quest Diagnostics Investments Incorporated Diagnosis of prostate cancer
WO2012129363A2 (en) 2011-03-24 2012-09-27 President And Fellows Of Harvard College Single cell nucleic acid detection and analysis
WO2012170907A2 (en) 2011-06-08 2012-12-13 Life Technologies Corporation Polymerization of nucleic acids using proteins having low isoelectric points
EP2718260B1 (en) 2011-06-08 2018-07-25 Life Technologies Corporation Design and development of novel detergents for use in pcr systems
MX347611B (es) 2011-06-19 2017-05-04 Abogen Inc Dispositivos, soluciones y metodos para recoleccion de muestras.
EP2766498B1 (en) 2011-10-14 2019-06-19 President and Fellows of Harvard College Sequencing by structure assembly
US11021737B2 (en) 2011-12-22 2021-06-01 President And Fellows Of Harvard College Compositions and methods for analyte detection
WO2014163886A1 (en) 2013-03-12 2014-10-09 President And Fellows Of Harvard College Method of generating a three-dimensional nucleic acid containing matrix
EP4108782B1 (en) 2011-12-22 2023-06-07 President and Fellows of Harvard College Compositions and methods for analyte detection
WO2013184754A2 (en) 2012-06-05 2013-12-12 President And Fellows Of Harvard College Spatial sequencing of nucleic acids using dna origami probes
US20160040229A1 (en) 2013-08-16 2016-02-11 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
US11913065B2 (en) 2012-09-04 2024-02-27 Guardent Health, Inc. Systems and methods to detect rare mutations and copy number variation
CA2883901C (en) 2012-09-04 2023-04-11 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
US10876152B2 (en) 2012-09-04 2020-12-29 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
EP3603679B1 (en) 2013-06-04 2022-08-10 President and Fellows of Harvard College Rna-guided transcriptional regulation
CN106458885B (zh) 2013-10-25 2019-12-10 生命技术公司 用于聚合酶链式反应系统的新颖化合物及其应用
IL285106B (en) 2013-11-07 2022-09-01 Univ Leland Stanford Junior Clean nucleic acids are suitable for analyzing the human microbiome and its parts
EP3524694B1 (en) 2013-12-28 2020-07-15 Guardant Health, Inc. Methods and systems for detecting genetic variants
JP2017516477A (ja) * 2014-05-27 2017-06-22 ディーエヌエー ジェノテック インク 頑丈な微生物の生存能力を安定化および維持するための組成物および方法
MX2017000445A (es) * 2014-07-11 2017-07-28 Abbott Molecular Inc Procedimiento de prueba automatizada de carga viral de vih-1 para gotas secas.
ES2741400T3 (es) 2014-07-18 2020-02-10 Univ Hong Kong Chinese Análisis de patrones de metilación de tejidos en mezcla de ADN
CN104195134A (zh) * 2014-09-18 2014-12-10 宁波有成生物医药科技有限公司 一种从尿液中提取核酸的试剂盒及提取方法
WO2016187234A1 (en) * 2015-05-18 2016-11-24 Karius, Inc. Compositions and methods for enriching populations of nucleic acids
WO2017079406A1 (en) 2015-11-03 2017-05-11 President And Fellows Of Harvard College Method and apparatus for volumetric imaging of a three-dimensional nucleic acid containing matrix
WO2017106768A1 (en) 2015-12-17 2017-06-22 Guardant Health, Inc. Methods to determine tumor gene copy number by analysis of cell-free dna
EP3978627A1 (en) 2016-03-25 2022-04-06 Karius, Inc. Methods using synthetic nucleic acid spike-ins
US11384382B2 (en) 2016-04-14 2022-07-12 Guardant Health, Inc. Methods of attaching adapters to sample nucleic acids
EP3443066A4 (en) 2016-04-14 2019-12-11 Guardant Health, Inc. EARLY DETECTION METHODS FOR CANCER
WO2017189525A1 (en) * 2016-04-25 2017-11-02 President And Fellows Of Harvard College Hybridization chain reaction methods for in situ molecular detection
GB2570412A (en) 2016-08-31 2019-07-24 Harvard College Methods of generating libraries of nucleic acid sequences for detection via fluorescent in situ sequencing
EP3507385A4 (en) 2016-08-31 2020-04-29 President and Fellows of Harvard College METHODS OF COMBINING THE DETECTION OF BIOMOLECULES IN A SINGLE ASSAY USING IN SITU FLUORESCENT SEQUENCING
US9850523B1 (en) 2016-09-30 2017-12-26 Guardant Health, Inc. Methods for multi-resolution analysis of cell-free nucleic acids
CA3126055A1 (en) 2016-09-30 2018-04-05 Guardant Health, Inc. Methods for multi-resolution analysis of cell-free nucleic acids
AU2017369018B2 (en) * 2016-11-30 2021-02-25 The Chinese University Of Hong Kong Analysis of cell-free DNA in urine and other samples
CA3059370C (en) 2017-04-12 2022-05-10 Karius, Inc. Methods for concurrent analysis of dna and rna in mixed samples
EP3765592A4 (en) 2018-03-16 2021-12-08 Karius Inc. SERIES OF SAMPLES TO DIFFERENTIATE TARGET NUCLEIC ACIDS FROM CONTAMINATING NUCLEIC ACIDS
WO2020028194A1 (en) 2018-07-30 2020-02-06 Readcoor, Inc. Methods and systems for sample processing or analysis
EP3918089A1 (en) 2019-01-31 2021-12-08 Guardant Health, Inc. Compositions and methods for isolating cell-free dna
KR102286565B1 (ko) * 2020-01-13 2021-08-05 대한민국 소변에서 결핵균 trDNA 추출용 올리고머
RU2759232C1 (ru) * 2021-01-20 2021-11-11 Федеральное государственное бюджетное учреждение "Государственный научный центр дерматовенерологии и косметологии" Министерства здравоохранения Российской Федерации Способ оценки эффективности терапии лепры с использованием полимеразной цепной реакции для амплификации видоспецифичных участков геномов лепры, человека или мыши

Family Cites Families (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5856088A (en) * 1989-07-11 1999-01-05 Gen-Probe Incorporated Detection of human immunodeficiency virus type 1
US5168039A (en) * 1990-09-28 1992-12-01 The Board Of Trustees Of The University Of Arkansas Repetitive DNA sequence specific for mycobacterium tuberculosis to be used for the diagnosis of tuberculosis
WO1995004140A1 (en) 1993-07-28 1995-02-09 Akzo Nobel N.V. Process for isolating nucleic acid from gram positive microorganisms
US5631130A (en) * 1994-05-13 1997-05-20 Abbott Laboratories Materials and methods for the detection of Mycobacterium tuberculosis
EP0771360B1 (en) * 1994-06-09 2004-03-10 Innogenetics N.V. Method for the detection of the antibiotic resistance spectrum of mycobacterium species
US5731150A (en) * 1995-11-01 1998-03-24 Chiron Diagnostic Corporation IS6110 based molecular detection of mycobacterium tuberculosis
US6027945A (en) * 1997-01-21 2000-02-22 Promega Corporation Methods of isolating biological target materials using silica magnetic particles
US6492144B1 (en) * 1997-05-30 2002-12-10 Diagen Corporation Methods for detection of nucleic acid sequences in urine
ES2355631T3 (es) * 1997-05-30 2011-03-29 Trovagene, Inc. Procedimiento para detectar secuencias de ácidos nucleicos en la orina.
US20020119478A1 (en) * 1997-05-30 2002-08-29 Diagen Corporation Methods for detection of nucleic acid sequences in urine
US5962665A (en) 1997-06-16 1999-10-05 Abbott Laboratories Nucleic acid primers and probes for detecting HIV-1 and HIV-2
DE69937747T2 (de) * 1998-10-28 2008-12-04 Covaris, Inc., Woburn Vorrichtung und verfahren zur kontrolle einer akustischen behandlung
US7196183B2 (en) * 2001-08-31 2007-03-27 Innogenetics N.V. Hepatitis C virus genotype, and its use as prophylactic, therapeutic and diagnostic agent
US20040053264A1 (en) * 2002-02-01 2004-03-18 Park Sung Sup Clinical panel assay using DNA chips
ITRM20050067A1 (it) * 2005-02-17 2006-08-18 Istituto Naz Per Le Malattie I Metodo per la rivelazione di acidi nucleici virali o di origine virale nelle urine.
AU2006214444B8 (en) 2005-02-17 2012-04-05 Trovagene, Inc. Compositions and methods for detecting pathogen specific nucleic acids in urine
US7914982B2 (en) * 2005-02-17 2011-03-29 Trovagene, Inc. Methods for detecting pathogen specific nucleic acids in urine
CA2597948A1 (en) 2005-02-17 2006-08-24 Istituto Nazionale Per Le Malattie Infettive Irccs Lazzaro Spallanzani Compositions and methods for detecting viral specific nucleic acids in urine

Also Published As

Publication number Publication date
JP2008536481A (ja) 2008-09-11
CN103045758A (zh) 2013-04-17
CY1114107T1 (el) 2016-07-27
CN101253273A (zh) 2008-08-27
ES2410598T3 (es) 2013-07-02
CN101253273B (zh) 2013-08-28
DK1856295T3 (da) 2013-07-01
ITRM20050068A1 (it) 2006-08-18
JP2013143946A (ja) 2013-07-25
JP5281293B2 (ja) 2013-09-04
US7803929B2 (en) 2010-09-28
PT1856295E (pt) 2013-07-10
HK1110903A1 (en) 2008-07-25
US20060183107A1 (en) 2006-08-17

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