RU2015156796A - The method of genetic certification of strains of Bacillus thuringiensis using multiplex rapid analysis of reference DNA sequences - Google Patents

The method of genetic certification of strains of Bacillus thuringiensis using multiplex rapid analysis of reference DNA sequences Download PDF

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RU2015156796A
RU2015156796A RU2015156796A RU2015156796A RU2015156796A RU 2015156796 A RU2015156796 A RU 2015156796A RU 2015156796 A RU2015156796 A RU 2015156796A RU 2015156796 A RU2015156796 A RU 2015156796A RU 2015156796 A RU2015156796 A RU 2015156796A
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seq
primers
combination
sequences
primers containing
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RU2015156796A
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RU2627178C2 (en
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Вера Игоревна Сафронова
Евгений Евгеньевич Андронов
Анна Львовна Сазанова
Александр Игоревич Жернаков
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Федеральное государственное бюджетное научное учреждение "Всероссийский научно-исследовательский институт сельскохозяйственной микробиологии" (ФГБНУ ВНИИСХМ)
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
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  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
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Claims (16)

1. Способ генетической паспортизации штаммов Bacillus thuringiensis с помощью мультиплексного экспресс-анализа референтных последовательностей ДНК, включающий:1. The method of genetic certification of strains of Bacillus thuringiensis using multiplex rapid analysis of reference DNA sequences, including: а) выделение бактериальной ДНК,a) the isolation of bacterial DNA, б) проведение мультилокусной ПЦР для получения референт-комплексов ДНК с использованием праймеров, содержащих последовательности SEQ ID NO: 1-60 и их комбинаций.b) conducting multilocus PCR to obtain DNA reference complexes using primers containing the sequences of SEQ ID NO: 1-60 and their combinations. в) пиросеквенирование образцов ДНК.c) pyrosequencing of DNA samples. 2. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 45, SEQ ID NO: 7, SEQ ID NO: 1, SEQ ID NO: 25, SEQ ID NO: 53.2. The method according to p. 1, characterized in that the primers are a combination of primers containing the sequence of SEQ ID NO: 45, SEQ ID NO: 7, SEQ ID NO: 1, SEQ ID NO: 25, SEQ ID NO: 53 . 3. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 47, SEQ ID NO: 9, SEQ ID NO: 3, SEQ ID NO: 27, SEQ ID NO: 55.3. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences SEQ ID NO: 47, SEQ ID NO: 9, SEQ ID NO: 3, SEQ ID NO: 27, SEQ ID NO: 55 . 4. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 11, SEQ ID NO: 49, SEQ ID NO: 5, SEQ ID NO: 29, SEQ ID NO: 57.4. The method according to p. 1, characterized in that the primers are a combination of primers containing the sequence of SEQ ID NO: 11, SEQ ID NO: 49, SEQ ID NO: 5, SEQ ID NO: 29, SEQ ID NO: 57 . 5. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 13, SEQ ID NO: 51, SEQ ID NO: 15, SEQ ID NO: 19, SEQ ID NO: 31.5. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences SEQ ID NO: 13, SEQ ID NO: 51, SEQ ID NO: 15, SEQ ID NO: 19, SEQ ID NO: 31 . 6. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 17, SEQ ID NO: 21, SEQ ID NO: 33, SEQ ID NO: 23, SEQ ID NO: 35.6. The method according to p. 1, characterized in that the primers are a combination of primers containing the sequence of SEQ ID NO: 17, SEQ ID NO: 21, SEQ ID NO: 33, SEQ ID NO: 23, SEQ ID NO: 35 . 7. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 41, SEQ ID NO: 37, SEQ ID NO: 59, SEQ ID NO: 39, SEQ ID NO: 43.7. The method according to p. 1, characterized in that the primers are a combination of primers containing the sequences of SEQ ID NO: 41, SEQ ID NO: 37, SEQ ID NO: 59, SEQ ID NO: 39, SEQ ID NO: 43 . 8. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 46, SEQ ID NO: 8, SEQ ID NO: 2, SEQ ID NO: 26, SEQ ID NO: 54.8. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences SEQ ID NO: 46, SEQ ID NO: 8, SEQ ID NO: 2, SEQ ID NO: 26, SEQ ID NO: 54 . 9. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 48, SEQ ID NO: 10, SEQ ID NO: 4, SEQ ID NO: 28, SEQ ID NO: 56.9. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences SEQ ID NO: 48, SEQ ID NO: 10, SEQ ID NO: 4, SEQ ID NO: 28, SEQ ID NO: 56 . 10. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 12, SEQ ID NO: 50, SEQ ID NO: 6, SEQ ID NO: 30, SEQ ID NO: 58.10. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences of SEQ ID NO: 12, SEQ ID NO: 50, SEQ ID NO: 6, SEQ ID NO: 30, SEQ ID NO: 58 . 11. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 14, SEQ ID NO: 52, SEQ ID NO: 16, SEQ ID NO: 20, SEQ ID NO: 32.11. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences SEQ ID NO: 14, SEQ ID NO: 52, SEQ ID NO: 16, SEQ ID NO: 20, SEQ ID NO: 32 . 12. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 18, SEQ ID NO: 22, SEQ ID NO: 34, SEQ ID NO: 24, SEQ ID NO: 36.12. The method according to p. 1, characterized in that said primers are a combination of primers containing the sequences SEQ ID NO: 18, SEQ ID NO: 22, SEQ ID NO: 34, SEQ ID NO: 24, SEQ ID NO: 36 . 13. Способ по п. 1, отличающийся тем, что указанные праймеры представляют собой комбинацию праймеров, содержащих последовательности SEQ ID NO: 42, SEQ ID NO: 38, SEQ ID NO: 60, SEQ ID NO: 40, SEQ ID NO: 44.13. The method according to p. 1, characterized in that the primers are a combination of primers containing the sequence of SEQ ID NO: 42, SEQ ID NO: 38, SEQ ID NO: 60, SEQ ID NO: 40, SEQ ID NO: 44 .
RU2015156796A 2015-12-29 2015-12-29 Method for bacillus thuringiensis strains genetic certification by means of multiplex express analysis of reference dna sequences RU2627178C2 (en)

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