MXPA01008505A - System and method for managing and presenting information derived from gene expression profiling. - Google Patents

System and method for managing and presenting information derived from gene expression profiling.

Info

Publication number
MXPA01008505A
MXPA01008505A MXPA01008505A MXPA01008505A MXPA01008505A MX PA01008505 A MXPA01008505 A MX PA01008505A MX PA01008505 A MXPA01008505 A MX PA01008505A MX PA01008505 A MXPA01008505 A MX PA01008505A MX PA01008505 A MXPA01008505 A MX PA01008505A
Authority
MX
Mexico
Prior art keywords
regions
reaction
biological
sets
managing
Prior art date
Application number
MXPA01008505A
Other languages
Spanish (es)
Inventor
John C Rogers
Original Assignee
Warner Lambert Co
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Warner Lambert Co filed Critical Warner Lambert Co
Publication of MXPA01008505A publication Critical patent/MXPA01008505A/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression

Abstract

A data processing system and method for managing and presenting information derived from a differential expression of genetic information which can be used to model a physiological response of biological cells. A data-represented map of metabolic pathways is provided. The map has a matrix of regions and locations within each of the regions. The regions are defined by respective coordinate sets. Each of the metabolic pathways include, at certain ones of the locations, respective graphical representations of a reaction, a substrate and a product of the reaction, and at least one biological catalyst of the reaction. An association mechanism links previously generated sets of affected sequence data to biological catalyst identifiers, each identifying one or more unique biological catalayts, and which links the biological catalyst identifiers to the coordinate sets. The sets of affected sequence data represent a direction and a magnitude of regulation of each one of a number of different nucleic acid sequences.
MXPA01008505A 1999-02-23 2000-02-22 System and method for managing and presenting information derived from gene expression profiling. MXPA01008505A (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US12143299P 1999-02-23 1999-02-23
PCT/US2000/004338 WO2000050889A1 (en) 1999-02-23 2000-02-22 System and method for managing and presenting information derived from gene expression profiling

Publications (1)

Publication Number Publication Date
MXPA01008505A true MXPA01008505A (en) 2004-06-07

Family

ID=22396699

Family Applications (1)

Application Number Title Priority Date Filing Date
MXPA01008505A MXPA01008505A (en) 1999-02-23 2000-02-22 System and method for managing and presenting information derived from gene expression profiling.

Country Status (8)

Country Link
EP (1) EP1171766A4 (en)
JP (1) JP2003505749A (en)
AU (1) AU3237600A (en)
BR (1) BR0008480A (en)
CA (1) CA2362544A1 (en)
MX (1) MXPA01008505A (en)
TR (1) TR200102432T2 (en)
WO (1) WO2000050889A1 (en)

Families Citing this family (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1328880A4 (en) * 2000-10-12 2004-12-15 Iconix Pharm Inc Interactive correlation of compound information and genomic information
US8000949B2 (en) 2001-06-18 2011-08-16 Genego, Inc. Methods for identification of novel protein drug targets and biomarkers utilizing functional networks
US20050027729A1 (en) * 2002-05-22 2005-02-03 Allan Kuchinsky System and methods for visualizing and manipulating multiple data values with graphical views of biological relationships
JP2006505837A (en) * 2002-06-18 2006-02-16 ゲネゴ， インク． Methods for identifying compounds that treat disease states
ATE451475T1 (en) * 2003-07-03 2009-12-15 Gentron Llc METHODS AND SYSTEMS FOR DIAGNOSING DISEASES NOT AFFECTING THE CENTRAL NERVOUS SYSTEM (CNS) IN CNS SAMPLES
SG116505A1 (en) * 2003-09-12 2005-11-28 Nanyang Polytechnic System and method for constructing pathway networks of two or more pathways for a set of genes or proteins.
WO2005036441A1 (en) * 2003-10-07 2005-04-21 Reverse Proteomics Research Institute Co., Ltd. Method for visualizing data on correlation between biological events, analysis method, and database
US7588892B2 (en) 2004-07-19 2009-09-15 Entelos, Inc. Reagent sets and gene signatures for renal tubule injury
US7467118B2 (en) 2006-01-12 2008-12-16 Entelos Inc. Adjusted sparse linear programming method for classifying multi-dimensional biological data
JP5272822B2 (en) * 2009-03-17 2013-08-28 株式会社島津製作所 Data processing device for metabolite analysis
CN103678954B (en) * 2013-12-11 2017-05-24 深圳先进技术研究院 Method for setting up multi-class specific expression molecule sets and class network through biological chip data, application of method and evaluation method
KR101610785B1 (en) 2015-09-11 2016-04-08 한국과학기술정보연구원 appratus for simulating cell and method for simulating cell

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5866330A (en) * 1995-09-12 1999-02-02 The Johns Hopkins University School Of Medicine Method for serial analysis of gene expression

Also Published As

Publication number Publication date
JP2003505749A (en) 2003-02-12
CA2362544A1 (en) 2000-08-31
AU3237600A (en) 2000-09-14
EP1171766A1 (en) 2002-01-16
EP1171766A4 (en) 2002-10-23
WO2000050889A1 (en) 2000-08-31
TR200102432T2 (en) 2002-09-23
BR0008480A (en) 2002-10-22

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