BR0008480A - System and process for control and presentation of information derived from determining gene expression profile - Google Patents

System and process for control and presentation of information derived from determining gene expression profile

Info

Publication number
BR0008480A
BR0008480A BR0008480-8A BR0008480A BR0008480A BR 0008480 A BR0008480 A BR 0008480A BR 0008480 A BR0008480 A BR 0008480A BR 0008480 A BR0008480 A BR 0008480A
Authority
BR
Brazil
Prior art keywords
reaction
biological
presentation
sets
gene expression
Prior art date
Application number
BR0008480-8A
Other languages
Portuguese (pt)
Inventor
John C Rogers
Original Assignee
Warner Lambert Co
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Warner Lambert Co filed Critical Warner Lambert Co
Publication of BR0008480A publication Critical patent/BR0008480A/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Data Mining & Analysis (AREA)
  • Databases & Information Systems (AREA)
  • Artificial Intelligence (AREA)
  • Bioethics (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Physiology (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

"SISTEMA E PROCESSO PARA CONTROLE E APRESENTAçãO DE INFORMAçãO DERIVADA DE DETERMINAçãO DO PERFIL DE EXPRESSãO DE GENE". Um sistema de processamento de dados para controle e apresentação de informação obtida partindo de uma expressão diferencial de informação genética que pode ser usada para modelar uma resposta fisiológica de células biológicas. é fornecido um mapa de vias metabólicas com dados representados. O mapa tem uma matriz de regiões e de locações dentro de cada uma das regiões. As regiões são definidas por respectivos conjuntos de coordenada. Cada uma das vias metabólicas inclui, em algumas das locações, representações gráficas respectivas de uma reação, de um substrato e de um produto da reação e pelo menos um catalisador biológico da reação. Um mecanismo de associação liga conjuntos gerados anteriormente de dados de seq³ência afetados a identificadores de catalisador biológico, cada um identificando um ou mais catalisadores biológicos sem par e que liga os identificadores de catalisador biológico aos conjuntos de coordenada. Os conjuntos de dados de seq³ência afetados representam uma direção e uma grandeza de regulagem de cada um de algumas seq³ências de ácido nucléico diferentes."SYSTEM AND PROCESS FOR CONTROL AND PRESENTATION OF INFORMATION DERIVED FROM DETERMINING THE GENE EXPRESSION PROFILE". A data processing system for controlling and presenting information obtained from a differential expression of genetic information that can be used to model a physiological response of biological cells. a map of metabolic pathways with represented data is provided. The map has an array of regions and locations within each region. The regions are defined by respective coordinate sets. Each of the metabolic pathways includes, in some locations, respective graphic representations of a reaction, a substrate and a product of the reaction and at least one biological catalyst for the reaction. An association mechanism links previously generated sets of affected sequence data to biological catalyst identifiers, each identifying one or more unique biological catalysts and linking the biological catalyst identifiers to the coordinate sets. The affected sequence data sets represent a direction and regulating quantity for each of a few different nucleic acid sequences.

BR0008480-8A 1999-02-23 2000-02-22 System and process for control and presentation of information derived from determining gene expression profile BR0008480A (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US12143299P 1999-02-23 1999-02-23
PCT/US2000/004338 WO2000050889A1 (en) 1999-02-23 2000-02-22 System and method for managing and presenting information derived from gene expression profiling

Publications (1)

Publication Number Publication Date
BR0008480A true BR0008480A (en) 2002-10-22

Family

ID=22396699

Family Applications (1)

Application Number Title Priority Date Filing Date
BR0008480-8A BR0008480A (en) 1999-02-23 2000-02-22 System and process for control and presentation of information derived from determining gene expression profile

Country Status (8)

Country Link
EP (1) EP1171766A4 (en)
JP (1) JP2003505749A (en)
AU (1) AU3237600A (en)
BR (1) BR0008480A (en)
CA (1) CA2362544A1 (en)
MX (1) MXPA01008505A (en)
TR (1) TR200102432T2 (en)
WO (1) WO2000050889A1 (en)

Families Citing this family (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1328880A4 (en) * 2000-10-12 2004-12-15 Iconix Pharm Inc Interactive correlation of compound information and genomic information
US8000949B2 (en) 2001-06-18 2011-08-16 Genego, Inc. Methods for identification of novel protein drug targets and biomarkers utilizing functional networks
US20050027729A1 (en) * 2002-05-22 2005-02-03 Allan Kuchinsky System and methods for visualizing and manipulating multiple data values with graphical views of biological relationships
JP2006505837A (en) * 2002-06-18 2006-02-16 ゲネゴ， インク． Methods for identifying compounds that treat disease states
US20060263783A1 (en) * 2003-07-03 2006-11-23 Podhajcer Osvaldo L Methods and systems for diagnosis of non-central nervous system (cns) diseases in cns samples
SG116505A1 (en) * 2003-09-12 2005-11-28 Nanyang Polytechnic System and method for constructing pathway networks of two or more pathways for a set of genes or proteins.
WO2005036441A1 (en) * 2003-10-07 2005-04-21 Reverse Proteomics Research Institute Co., Ltd. Method for visualizing data on correlation between biological events, analysis method, and database
US7588892B2 (en) 2004-07-19 2009-09-15 Entelos, Inc. Reagent sets and gene signatures for renal tubule injury
US7467118B2 (en) 2006-01-12 2008-12-16 Entelos Inc. Adjusted sparse linear programming method for classifying multi-dimensional biological data
JP5272822B2 (en) * 2009-03-17 2013-08-28 株式会社島津製作所 Data processing device for metabolite analysis
CN103678954B (en) * 2013-12-11 2017-05-24 深圳先进技术研究院 Method for setting up multi-class specific expression molecule sets and class network through biological chip data, application of method and evaluation method
KR101610785B1 (en) 2015-09-11 2016-04-08 한국과학기술정보연구원 appratus for simulating cell and method for simulating cell

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5866330A (en) * 1995-09-12 1999-02-02 The Johns Hopkins University School Of Medicine Method for serial analysis of gene expression

Also Published As

Publication number Publication date
TR200102432T2 (en) 2002-09-23
JP2003505749A (en) 2003-02-12
EP1171766A1 (en) 2002-01-16
WO2000050889A1 (en) 2000-08-31
AU3237600A (en) 2000-09-14
EP1171766A4 (en) 2002-10-23
CA2362544A1 (en) 2000-08-31
MXPA01008505A (en) 2004-06-07

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Legal Events

Date Code Title Description
B08F Application dismissed because of non-payment of annual fees [chapter 8.6 patent gazette]

Free format text: REFERENTE A 7A, 8A E 9A ANUIDADES

B08K Patent lapsed as no evidence of payment of the annual fee has been furnished to inpi [chapter 8.11 patent gazette]

Free format text: REFERENTE AO DESPACHO 8.6 NA RPI2003 DE 26/05/2009.