MX2022005698A - Metodos y sistemas para identificar, clasificar y/o categorizar secuencias geneticas. - Google Patents

Metodos y sistemas para identificar, clasificar y/o categorizar secuencias geneticas.

Info

Publication number
MX2022005698A
MX2022005698A MX2022005698A MX2022005698A MX2022005698A MX 2022005698 A MX2022005698 A MX 2022005698A MX 2022005698 A MX2022005698 A MX 2022005698A MX 2022005698 A MX2022005698 A MX 2022005698A MX 2022005698 A MX2022005698 A MX 2022005698A
Authority
MX
Mexico
Prior art keywords
systems
methods
classifying
identifying
present disclosure
Prior art date
Application number
MX2022005698A
Other languages
English (en)
Inventor
Wei Keat Lim
Richard Copin
Original Assignee
Regeneron Pharma
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Regeneron Pharma filed Critical Regeneron Pharma
Publication of MX2022005698A publication Critical patent/MX2022005698A/es

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B10/00—ICT specially adapted for evolutionary bioinformatics, e.g. phylogenetic tree construction or analysis
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/30—Detection of binding sites or motifs
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/20—Sequence assembly
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Immunology (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • General Engineering & Computer Science (AREA)
  • Physiology (AREA)
  • Animal Behavior & Ethology (AREA)
  • Data Mining & Analysis (AREA)
  • Virology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)
  • Ultra Sonic Daignosis Equipment (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

La presente descripción proporciona métodos y sistemas para el análisis de la información sobre secuencias genómicas. La presente descripción proporciona, entre otras cosas, métodos y sistemas para caracterizar la conservación de secuencias. Como se analiza en el presente documento, ciertos métodos y sistemas de la presente descripción incluyen la asignación de un puntaje de similitud a una secuencia o a una comparación de secuencias por pares basada en una medida de cobertura y una medida de identidad entre dos secuencias alineadas.
MX2022005698A 2019-11-12 2020-11-11 Metodos y sistemas para identificar, clasificar y/o categorizar secuencias geneticas. MX2022005698A (es)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201962934323P 2019-11-12 2019-11-12
US202062993567P 2020-03-23 2020-03-23
PCT/US2020/060045 WO2021096980A1 (en) 2019-11-12 2020-11-11 Methods and systems for identifying, classifying, and/or ranking genetic sequences

Publications (1)

Publication Number Publication Date
MX2022005698A true MX2022005698A (es) 2022-08-17

Family

ID=73790212

Family Applications (1)

Application Number Title Priority Date Filing Date
MX2022005698A MX2022005698A (es) 2019-11-12 2020-11-11 Metodos y sistemas para identificar, clasificar y/o categorizar secuencias geneticas.

Country Status (10)

Country Link
US (1) US20210142868A1 (es)
EP (1) EP4059020A1 (es)
JP (1) JP2023502596A (es)
KR (1) KR20220100011A (es)
CN (1) CN114787928A (es)
AU (1) AU2020384498A1 (es)
CA (1) CA3158742A1 (es)
IL (1) IL292464A (es)
MX (1) MX2022005698A (es)
WO (1) WO2021096980A1 (es)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CR20220552A (es) 2020-04-02 2023-01-17 Regeneron Pharma Anticuerpos contra glicoproteína de espícula anti-sars-cov-2 y fragmentos de unión al antígeno
CN113327646B (zh) * 2021-06-30 2024-04-23 南京医基云医疗数据研究院有限公司 测序序列的处理方法及装置、存储介质、电子设备
WO2023023520A1 (en) * 2021-08-16 2023-02-23 Children's Medical Center Corporation Membrane fusion and immune evasion by the spike protein of sars-cov-2 delta variant
US20230108229A1 (en) * 2021-09-27 2023-04-06 International Business Machines Corporation Prediction of interference with host immune response system based on pathogen features
US20230101083A1 (en) * 2021-09-30 2023-03-30 Microsoft Technology Licensing, Llc Anti-counterfeit tags using base ratios of polynucleotides
CN114397452B (zh) * 2022-03-24 2022-06-24 江苏美克医学技术有限公司 新型冠状病毒Delta突变株或原型株检测试剂盒及其应用
CN116206675B (zh) * 2022-09-05 2023-09-15 北京分子之心科技有限公司 用于预测蛋白质复合物结构的方法、设备、介质及程序产品
CN115547414B (zh) * 2022-10-25 2023-04-14 黑龙江金域医学检验实验室有限公司 潜在毒力因子的确定方法、装置、计算机设备及存储介质
CN117789823A (zh) * 2024-02-27 2024-03-29 中国人民解放军军事科学院军事医学研究院 病原体基因组协同演化突变簇的识别方法、装置、存储介质及设备

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1960555A4 (en) * 2005-11-29 2011-09-07 Intelligent Med Devices Inc METHOD AND SYSTEMS FOR CONSTRUCTING PRIMERS AND PROBES
US20090327170A1 (en) * 2005-12-19 2009-12-31 Claudio Donati Methods of Clustering Gene and Protein Sequences
CA2998381A1 (en) * 2015-09-21 2017-03-30 The Regents Of The University Of California Pathogen detection using next generation sequencing
EP3467690A1 (en) * 2017-10-06 2019-04-10 Emweb bvba Improved alignment method for nucleic acid sequences
CR20220552A (es) 2020-04-02 2023-01-17 Regeneron Pharma Anticuerpos contra glicoproteína de espícula anti-sars-cov-2 y fragmentos de unión al antígeno

Also Published As

Publication number Publication date
CN114787928A (zh) 2022-07-22
JP2023502596A (ja) 2023-01-25
AU2020384498A1 (en) 2022-06-23
EP4059020A1 (en) 2022-09-21
KR20220100011A (ko) 2022-07-14
WO2021096980A1 (en) 2021-05-20
US20210142868A1 (en) 2021-05-13
IL292464A (en) 2022-06-01
CA3158742A1 (en) 2021-05-20

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