KR102579902B1 - 시퀀싱 공정 - Google Patents

시퀀싱 공정 Download PDF

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Publication number
KR102579902B1
KR102579902B1 KR1020227004592A KR20227004592A KR102579902B1 KR 102579902 B1 KR102579902 B1 KR 102579902B1 KR 1020227004592 A KR1020227004592 A KR 1020227004592A KR 20227004592 A KR20227004592 A KR 20227004592A KR 102579902 B1 KR102579902 B1 KR 102579902B1
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nucleic acid
template nucleic
sequences
sequence
molecular tag
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Korean (ko)
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KR20220025213A (ko
Inventor
캐서린 마리 버크
아론 얼 달링
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일루미나, 싱가포르 피티이 엘티디
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First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=51177418&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=KR102579902(B1) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Application filed by 일루미나, 싱가포르 피티이 엘티디 filed Critical 일루미나, 싱가포르 피티이 엘티디
Priority to KR1020237031371A priority Critical patent/KR102864537B1/ko
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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122—Massive parallel sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
    • C12Q2565/50—Detection characterised by immobilisation to a surface
    • C12Q2565/514—Detection characterised by immobilisation to a surface characterised by the use of the arrayed oligonucleotides as identifier tags, e.g. universal addressable array, anti-tag or tag complement array

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
KR1020227004592A 2014-05-23 2015-05-22 시퀀싱 공정 Active KR102579902B1 (ko)

Priority Applications (1)

Application Number Priority Date Filing Date Title
KR1020237031371A KR102864537B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
GBGB1409282.9A GB201409282D0 (en) 2014-05-23 2014-05-23 Sequencing process
GB1409282.9 2014-05-23
PCT/GB2015/051518 WO2015177570A1 (en) 2014-05-23 2015-05-22 Sequencing process
KR1020167036033A KR102363284B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Related Parent Applications (1)

Application Number Title Priority Date Filing Date
KR1020167036033A Division KR102363284B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Related Child Applications (1)

Application Number Title Priority Date Filing Date
KR1020237031371A Division KR102864537B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Publications (2)

Publication Number Publication Date
KR20220025213A KR20220025213A (ko) 2022-03-03
KR102579902B1 true KR102579902B1 (ko) 2023-09-18

Family

ID=51177418

Family Applications (3)

Application Number Title Priority Date Filing Date
KR1020227004592A Active KR102579902B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정
KR1020167036033A Active KR102363284B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정
KR1020237031371A Active KR102864537B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Family Applications After (2)

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KR1020167036033A Active KR102363284B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정
KR1020237031371A Active KR102864537B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Country Status (12)

Country Link
US (2) US11047002B2 (OSRAM)
EP (1) EP3146070B2 (OSRAM)
JP (1) JP6687605B2 (OSRAM)
KR (3) KR102579902B1 (OSRAM)
CN (2) CN107002120B (OSRAM)
AU (1) AU2015263055B2 (OSRAM)
CA (1) CA2949925A1 (OSRAM)
DK (1) DK3146070T5 (OSRAM)
ES (1) ES2697804T5 (OSRAM)
GB (1) GB201409282D0 (OSRAM)
SG (1) SG11201609754QA (OSRAM)
WO (1) WO2015177570A1 (OSRAM)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109074430B (zh) 2016-05-26 2022-03-29 贝克顿迪金森公司 分子标记计数调整方法
AU2017359048B2 (en) 2016-11-08 2022-07-21 Becton, Dickinson And Company Methods for expression profile classification
KR102790039B1 (ko) * 2016-11-08 2025-04-04 벡톤 디킨슨 앤드 컴퍼니 세포 표지 분류 방법
KR101798229B1 (ko) * 2016-12-27 2017-12-12 주식회사 천랩 전장 리보솜 rna 서열정보를 얻는 방법 및 상기 리보솜 rna 서열정보를 이용하여 미생물을 동정하는 방법
WO2019060494A1 (en) * 2017-09-20 2019-03-28 Life Technologies Corporation METHODS OF DETECTING FUSIONS USING COMPRESSED MOLECULAR LABEL NUCLEIC ACID SEQUENCE DATA
WO2019060804A1 (en) * 2017-09-25 2019-03-28 Cellular Research, Inc. IMMUNE BAR CODE RECEIVER ERROR CORRECTION
WO2019074960A1 (en) * 2017-10-09 2019-04-18 uBiome, Inc. SEQUENCING A SINGLE MOLECULE AND UNIQUE MOLECULAR IDENTIFIERS FOR CHARACTERIZING NUCLEIC ACID SEQUENCES
WO2019132010A1 (ja) * 2017-12-28 2019-07-04 タカラバイオ株式会社 塩基配列における塩基種を推定する方法、装置及びプログラム
EP3620539B1 (en) 2018-08-10 2026-01-14 Tata Consultancy Services Limited Method and system for improving amplicon sequencing based taxonomic resolution of microbial communities
CA3222084A1 (en) * 2018-08-13 2020-02-20 Illumina Singapore Pte. Ltd. Sequencing algorithm
WO2025255494A1 (en) 2024-06-07 2025-12-11 Illumina, Inc. Identifying the origin of amplified rna molecules

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US7094531B1 (en) * 1997-01-15 2006-08-22 Xzillion Gmbh Co. Nucleic acid sequencing
JP4403069B2 (ja) * 2002-08-12 2010-01-20 独立行政法人理化学研究所 クローニングおよび分析のためのｍＲＮＡの５’末端の使用方法
JP4413017B2 (ja) * 2004-01-15 2010-02-10 独立行政法人理化学研究所 クラスタリングプログラムおよびクラスタリング装置
DE602006013831D1 (de) * 2005-06-23 2010-06-02 Keygene Nv Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz
EP2044219B1 (en) * 2006-06-30 2013-05-22 DiscoveRx Corporation Detectable nucleic acid tag
US8932812B2 (en) 2009-12-17 2015-01-13 Keygene N.V. Restriction enzyme based whole genome sequencing
WO2012000445A1 (zh) † 2010-06-30 2012-01-05 深圳华大基因科技有限公司 新的的pcr测序方法及其在hla基因分型中的应用
US9033273B2 (en) 2010-11-02 2015-05-19 Jonathan Edelson Integrated aircraft ground navigation control system
AU2012242847B2 (en) 2011-04-15 2017-01-19 The Johns Hopkins University Safe sequencing system
US9074204B2 (en) * 2011-05-20 2015-07-07 Fluidigm Corporation Nucleic acid encoding reactions
US11177020B2 (en) † 2012-02-27 2021-11-16 The University Of North Carolina At Chapel Hill Methods and uses for molecular tags
ES2828661T3 (es) † 2012-03-20 2021-05-27 Univ Washington Through Its Center For Commercialization Métodos para reducir la tasa de error de la secuenciación de ADN masiva en paralelo mediante el uso de la secuenciación de secuencia consenso bicatenaria
EP2841601B1 (en) 2012-04-24 2019-03-06 Gen9, Inc. Methods for sorting nucleic acids and multiplexed preparative in vitro cloning
EP2898071A4 (en) 2012-09-21 2016-07-20 Broad Inst Inc COMPOSITIONS AND METHODS FOR LONG-TERM LABORATORIES AND PREPARED END OF NUCLEIC ACIDS IN EMULSION DROPS

Non-Patent Citations (5)

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Applied and Environmental Microbiology (2013) 79(17):5112-5120
European Journal of Clinical Microbiology & Infectious Diseases (2009) 28:1151-1154
Gut Pathogens (2014.02.24.) 6:4
Nature Methods (2013) 10(10):999-1002
PLoS ONE (2011) 6(12):e27310

Also Published As

Publication number Publication date
KR20170012390A (ko) 2017-02-02
CN107002120B (zh) 2022-08-09
JP2017517282A (ja) 2017-06-29
KR102363284B1 (ko) 2022-02-15
AU2015263055A1 (en) 2016-12-08
JP6687605B2 (ja) 2020-04-22
KR102864537B1 (ko) 2025-09-24
DK3146070T5 (en) 2019-01-21
EP3146070A1 (en) 2017-03-29
KR20230141873A (ko) 2023-10-10
ES2697804T3 (es) 2019-01-28
US20170183724A1 (en) 2017-06-29
AU2015263055B2 (en) 2020-12-03
EP3146070B2 (en) 2024-07-31
CN116072218A (zh) 2023-05-05
GB201409282D0 (en) 2014-07-09
CN107002120A (zh) 2017-08-01
CA2949925A1 (en) 2015-11-26
KR20220025213A (ko) 2022-03-03
ES2697804T5 (es) 2024-11-25
SG11201609754QA (en) 2016-12-29
US20210403991A1 (en) 2021-12-30
EP3146070B1 (en) 2018-09-26
WO2015177570A1 (en) 2015-11-26
US11047002B2 (en) 2021-06-29
DK3146070T3 (en) 2019-01-07

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