JP6934483B2 - イヌ糸状虫病の病因であるディロフィラリア・イミティス(Dirofilaria immitis)において大環状ラクトン耐性を予測するためのマーカー - Google Patents
イヌ糸状虫病の病因であるディロフィラリア・イミティス(Dirofilaria immitis)において大環状ラクトン耐性を予測するためのマーカー Download PDFInfo
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Description
ここでは、「大環状ラクトン」または「ML」とは、アベルメクチンおよびミルベマイシンを含むが必ずしもそれに限定されない、Streptomyces属に属する土壌微生物の産物またはその化学的誘導体を意味する。これらの分子を用いて、広範な宿主において内部寄生虫および外部寄生虫の種を処置する。使用中のアベルメクチンとしては限定するものではないが、イベルメクチン、アバメクチン、ドラメクチン、エプリノメクチンおよびセラメクチンが挙げられる。利用可能なミルベマイシンとしては、限定するものではないが、ミルベマイシンオキシムおよびモキシデクチンが挙げられる。大環状ラクトンは、低用量のレベルで強力な広い抗寄生生物スペクトルを有する。それらは、多くの未成熟の線虫類(体内寄生幼虫(hypobiotic larvae)を含む)および節足動物に対して活性である。単回治療用量は、差し迫った線虫感染に対して有効であるために十分な濃度で治療後長期間持続し得る。
一局面では、本発明は、本出願で開示されるような、単離された核酸分子であって、その全長にわたって、配列番号1〜127に対して少なくとも80%の配列同一性を保有しており、かつ代替的ヌクレオチドをSNPの位置(すなわち、多形性部位)で含んでおり、この代替的ヌクレオチドが配列番号1〜127中の下線を付されたヌクレオチドで示される、単離された核酸分子に関する。代替的ヌクレオチドは一般には、図1および表1に示されるような、配列内の示された位置では出現がより低頻度である。本発明の一実施形態では、線虫寄生生物のゲノムまたは寄生生物の集団は、配列番号1〜127に示される多形性部位で1つ以上の代替的ヌクレオチドを含んでもよい。これらの代替的ヌクレオチドの存在は一般には、その代替的ヌクレオチドを含まない寄生生物に比較した場合のMLに対する寄生生物の感受性低下と相関する。
SNPは、ゲノム中の特定の位置(例えば、多形性部位)でヌクレオチドの同一性を決定し得、かつ個体または個体の集団の間の特定のゲノム位置でヌクレオチドの同一性の比較を可能にする任意の方法によって検出され得る。特定の位置でのヌクレオチドの同一性における相違は、SNPの指標であり得る。
この方法は、PCR反応がSNPを含んでいる部位を通って伸展し、SNP領域にハイブリダイズするプローブから、このプローブがSNPの存在に起因してミスマッチを含むか否か次第で、蛍光色素を遊離するように設定する。
一実施例では、D.イミティス由来の遺伝子マーカーとしては、下の配列(配列番号1〜109)が挙げられ、ここでは下線を付したヌクレオチド(すなわち、多形性部位)は、MLに対する耐性に関連するフラグメント内のヌクレオチド位置を示す(すなわち、代替的ヌクレオチド)。これらの配列では、下線を付した位置のヌクレオチドは一般には、MLに対して耐性ではない生物(野性型)においてこの位置で見出されるヌクレオチドとは異なる。下の配列では、示した配列中で下線を付されたヌクレオチドは、MLに対する耐性に関連する代替的ヌクレオチドである。各々の配列についての見出しでは、多形性部位での野性型から代替的ヌクレオチド(ML耐性と代替的に相関する)へのヌクレオチド変化が示される(例えば、野性型におけるCおよび代替的配列におけるAは、C→Aと示される)。多形性部位での各々のSNPについての遺伝子型の頻度は、図1に示される。図1では、星印(*)で示されるマーカーについて、グラフは、配列番号1〜109に示されるヌクレオチド配列と比較した、逆相補配列の遺伝子型に相当する。
AACATAAACATATTGAACTGAATCCTGCAAACAGTTCTCTTATAACGTGAACCATAACTAAATTTAGAGAAAATATGAAAAAGAAAAATAAGTTGCTTTTGCTCGTGCACCAACTCTAATACCCAGGAAATCAAGAAGTGATAATGAGTAATGTCATCATTAGATTCAGTAATTGGTGACACTATCAATATTATTATTATTATACTTAAAAATACGACGACCACTTATCGTAACTTAAAGCATGCATAATACGACTGTCATCATATTACATTTCTTCAAGTTCGTATTGGACAAGTGATT
マーカー_714(配列番号2);C→T
GACAAGCGTTGACGGGAGAGACGATATAATAATAAAGAAGGCATTGGGTATCAGAAGGCACAATCCAATTATAAATGCCAAGGCAAAATGAATAAAATTTATGCTGACGATTTGATCAATTACGAAGAATTTCCGATCGGCTCGAATCTTTGTTTGTATGTGCACTACTGTTAACTTAATCTTTGTTTTATATACTTTTGCGTGTCATATATAATATATTCATGTCAACTGATACGTTATGATGTTTTTTTGTAAATTAAGTTGATCGGAAACCTGAAGTCTATTTCAAATTTAAGAAAT
マーカー_814(配列番号3);T→C
TTTTAGGAAAATGGTGACTGTAGAGAGATATTATCGGAACGACAAGGTCCACTTCGAACGGGTCTTTTATTGTCGACGGATTGTGAACCAAGTTTTGGCATTCATAATGACAGGTAGCTATTTTTCCATCATCCCATTTTTGTATTAGTGCAAGCAAGTCATGAGTCGAAAGAAAATCTCAAAAGAAAAAAATGAAATTTCAGGTTCAAAGGACTGCGTCCATTATTCGCACTGGTTGATGAGAACGTACAGATTCCAGAGCGGCAATGCTGCACAGTATCTTTTGTTTCACTTCTGAAT
マーカー_887(配列番号4);C→T
TCGATTAAAAATTATCATCGATAAAATTCTAAAATTTATTTTAGTAAAATTATTATTATTTTGATGAATAAGTTAACAAAAAAATTTTAATAACTTTTTGATTCGCCAAAAATCTAATTCGTTAAAAAGTCGTTCCAAACAGATATCGCTTGTTCGATGAAAATGTCCGGTTGTTAGAAAATCATAAATTGGTTCAAATAATTTTCCAGAACGTTCGAAAAAATATTCCCTTGTATCGGATAAATAACCATTACAATTTTCCACTCGTGTTGCATGTGTTTCTCGACAAAAATCAGCTAA
マーカー_1514(配列番号5);T→C
TCAACAGAAATCGAGATTCCAAAAAGTTTCCTACAAATACTTAATTATCAATGGATATTTAGTTTTGTTATCTGTTATCATAAGTTCTGCTTCTTACACGATTAAAAATGTCCAAGAATTTTTTACTATTCAAATGAGGGAAATAAAAAACCAATGCCAATAATATCCAGAAACTACATACATCTTTCTTTTTTCGAAGCTCATCTATTCCGGCCGAAAACAATGAAGAACATTAAAATTCTTAAAAGATAGTCTTAGCCTTTTCCTTGACCACTATCTTAACTGTCAGCGCTAAAATGT
マーカー_2557(配列番号6);T→C
AATAGTCGTCTCATTACTTTTTGACTTTTATAATTCGAGAATCTTATGTAGTCCTTCACTTTACCCTTCTTCTGTCGAACTAAGAATTACAGCATTATTTTCGAATTTAATGTGTAAAAGACAATAGCAGATTTTGTAATTTTGTGTTAACCTCACTTTATATTTCGCTTCATATCGTGACAGAGAATTACTATTTCAGAGAGTATTACTTGTCACCAGAGAATCTCCAGAAAGATTTTTATTTACGTCGGAAAATGGACAAAAATGGTTTCTTATCATTAGCACTGATAGCTAGTTTCC
マーカー_3367(配列番号7);G→A
TATCTCTTGTTGTGTGTTCTGCATTGTATCAAAGTGGGTAAATTTTGCTTTAGACGTTGACTTATTGTCTTTTTTAAGTTATATTCTAGTCCATGTTTTTCTCTTTGCAAATATTTTTTTCCGCCGCCTATGATTCATTGTTTTGTTTGTAACTCTCTATTAAGTTGCTTTTAGTTTGAATTGTATCAAAATTTCAAACATTTAAAATACGCACTAGCACTATTTTTTCTTATCTCAATTAAGCGAATCCCGGAACAAGATTTAATCGATTTCCGAATCACAATTAAATCACTGGAAAAC
マーカー_3488(配列番号8);T→C
ATTTTCCTTAACAAATCATTTTCAAACGAAAAAACATTAAAAAGTGTTAAAATAAAATGGTGATATTGATAAGAAATTAATTCAACCTGCATATCAATTCTTGTAGCGGCCATTTTCTTAGCAAGTTCTATAGCAGCTCGATCCATATCACCTTCTTGCTCTAATGTCAATTCCGGTTCCGGAATTTTTTTTATTTTGCCATTCTTCATCTTTTTTTTATTTTTTACTGATATAGCTATAGACCCTTTCTCCCGTGCATGCCTGTAGGCCTGTTCTGATATACAGGCTTGTGAACCACTG
マーカー_4553(配列番号9);C→T
TTCTGGGGTAGTTATACGGAAAATTAGACAATGAAGAGAATCAAAAAACATGCGATTTTCAAACAGAGGAACTTTGGTACTTTTGCCTCGACTTACTTTATTTTAAAACCCATACAAAATAAATGTTTCATTTGATTGATATTGTCGTACTAATAATTAGAGCTTCAACATTAGGATTTTAATAACCTTCAATTTATTTCAGAATTTAAGAAACTTACGTATGGATGGAGAAAATATAAAGAATGGCGATGACAAATAAGATTTGCTATGAAAAAACTAATGCCACAAGATCCGAATGCA
マーカー_5266(配列番号10);C→T
TTTATGAACAAAAATAATAAAAATTAGGATAACAGATATCAATTTCTTTTAGCTATAAATATACGCTTCGATTGAAAAAAGCTTTCAAATTATAATTAAGGCATACGTTACGATATAGACAATTAAGTCGACATTAATTATTTGAAATATTTTAAATTTTTTTCTCTTTCTTTTTTTCTATTCTCTTCCAAAGTGTCAAATAGTTATGAAATTGTCAGAAGCTAAAATGATAATATTATTCAAGTTTATTACCTAATCTTTTATCACCTCATTTCTTATCATTTATCTGAAAATCTAATC
マーカー_5365(配列番号11);G→A
ATGTTGAATTTTTAATGAAACTTTTTCGGTGCATAAGCATTACAGATCTGTAAGCTGTGCAAACCCTGTTTCTTTGTAAATTGAAACAAAGATCATTTATTGTTTCCAGCGTCGATTTGACCTGGATAAATGTGGTACCAAAAGTAGATGACGAGAGGTAAGTGCAAACAAAATGCACAAAAATGATTTTGATGCACTCAAATCATTTTTAAGTTTTGTGCAATTTTCCATTTTATAGTTTCGTGATCGGTTGTTATTCATCAACTTGATTTTGTTTGTTTTTTGTGACTTATATTTCAT
マーカー_5667(配列番号12);G→A
TTTGACACTTTCAGATACCTTACAAACTCATCTCCAGCACCCAATTTACAATATCGCTGCCTAAATAAAGAATTTATTCGGATATGAGACTGTAGTTTTCATTCCGTACCAATCATAGTAGAACAGATCTATAGCATGGTGTCCTACTAAAGTTGTGACTGGCTATTAAGTATGTGGGTGTTTTTACGTGTGCGTGGGTGTTTGTGCGTGTGTGCGTGTGCGTTTCTGCACATATTTTCGTGCGCGGTGTCTGTGTGTGTCCGTTTGTATATGCCGAGTGTAGCTGTGTGTATGTTCTTG
マーカー_6568_A(配列番号13);G→C
CACTCATAATATACCTGTCAACAAACTCAGAAATCTGAATAAAATGACGCAAAAATGACAAAAACATTTTATCAACCTTTTCTTCATCACTCCCCCGCATTTCCAATTTTCTTCCAAACTGTTTTTGTCGTGCTACAAAGTCATCAGCCACTTCATTTTCTTCAAGATGGTTCGAGACGCCATTCTTGGATTCACCCCTTATTTCAACTGTTTCCGAAGTCCCAGCAGTTGAAGCTGAACCTAGCATTTATATCACCACCCGATGTCAAAAAATGACAGCGGTCAGAGAATACGACTTCC
マーカー_6568_B(配列番号14);G→A
GCTAGGTCAACAGTTGGTTTATTTGGACTTATACGATATTAAACATAATATCGCCTCATATACACAGAAATATCAAAAAAACGAACACAGCTAAATCGAAGAATACGAACAAATGTTTTAAAAATTATATTAAATCTTTTAATGCTCTCTACAATGTCGTATCTTCCCTTTTGTCTGTATTTCTCCTTTCGTTCCACCACTGCTATTTCTCATGCCTTTGAACTATGGTTCTCGTTGCGTCGAATTGTCCTCGAAACTGTTGTTTCTGTCGAATTACGTCGAACTGCTGGACTTTGTCGG
マーカー_7633(配列番号15);T→C
ATATCTCACTTCTGACATAAATTGAAGTGGCACTGATTTGAATGAAATGATAAATAAAATAAAGACGACAAGGTAGTGGAAAAAAAAAGAGGAGAAAACACCGTTTAGTTTTGGATGCAAGCTCGAATCTGAGTTTTCTTGCAAACCGTACACTGATCAATTTTCTTACACAAACATAAGAAAAAAAGAAGTGATTTTACTGTAGCTGTATCGTATAATTCAAATCATATATATATATGTTTCAATAATCTATACATTTATGTATATTTTTTTTTGAATGGAACAGTGAATGATTTTAAA
マーカー_9400(配列番号16);T→C
ACAAATGCCATCGGGAGAGAAATATCGTTGGCGTACTGATCACATTGGCGGTATCACTTCTTTGAAAACTCCAGCTGGTATTGTGTATCATTTCATGCAATACGCTATTTTTGATCGAATATGTCGACGGCGTAGTGTTTCATTTTCCAACGCATCTTACGTTGCGTGTATGGATGATGACGGACAATTATTGGAATATCAAACACCGGATCGATTGCATTCCGTAACCTTGAAACGTGACATATATGGGAGAGTAGTGCAAATAACTTCAGATGGCGAAAATATTTTCTTCGAATATGG
マーカー_9473(配列番号17);C→G
ATAATATATATTTCCATTGATAATATTTTTCATATTATGTGATGTTTGAAATTTTCTGCAATTGCTACATTCCGATTAAAAACTTTTATTATCCGTACTGGAGAATTTTGCTTTTTTTTGACGGTTTGTTCAATAAGTTGTCAATATATTGTCTGCCTTAGTAAAACCTTTCTAATCTATCCGTTCGAATTGGAAGTTGAAAGTTCAGCATCATTCTTTTAGTGAGGTGTTTAAGTTGTTCAATAGATATTATTTAGAACGATCTCAATTAAAATCTTCTGAATGATTTTATGTTTTTAT
マーカー_9858(配列番号18);A→G
GCAGCACATTGCACACAGTAAACTGCAAACTGAATTAAGAGATATTGGGTTGAATTATTTCTAATTTAAAAGGATATAATAAATGACTTTGATGATTGTTGATTTTAAGGTATCTCGGAAGACTCCATCAGTCTCAGTGCTCTAGCAATCGCTATAGGTACTAAAAGAAAAGAAAAGATGTCTCGTTATTCACTTTGAAATGTACATATCAAATCATTTTGTCGTATGAAATTAAGTATATTATGTCTAATCGTATCATTCGAAATGAATTTACTGTCACTGTTAGAACTATTTAGGCAG
マーカー_10349(配列番号19);A→G
AGAGTTCAATCGCCAAGTTGTTCTTTTTCTCGCTCGCAGAGATCAAAACGGTGTTGGCTATACACTCATTCATCAGGCTGTGATAGACATCTCTTAGAATTTCAGTGCTTTTCTGGATGAAAACATTATTTCTCAAACATGACACTTAAGGACAATAGTGCGTGACTTCTTTGTTAACGTACACGAGAAAACAAAACAGATGATGCTTGTTATCTTGGTGATAAATGTGTATTCAGAATAATGTTATATATCTTTGCGTGACAAATATCATTTCGTTATACTTCGGATACGCCTTTTTAT
マーカー_10520(配列番号20);A→G
AACTTTACTTGAACTTTTTTGGTGTTCAATTTTGAATATTATACCAACCATTCAGAAGACTGTATATAGAAATGAACCTTCAAGAATTAATCGAAATTTTTATTAAAATCTTTTATTTGAATATTTCATTATTTAAACTCATTACTATTTGCAGTATATTATTAGATCTAATGTAGAAAAAAAAATCAGATGGCAAAAATAATATCATAGGTTTGTTTTTAAAATTCATTGCAAAATTCAGTGCGCCGTTCCAGTCGCTCGTAATTACCCTATCCCTGAGCTTTACAAAAAGAATGCTTT
マーカー_10678(配列番号21);A→T
AGGTATCTAGATAGCATAATAAATTACTACACAAACCGATGGAAACGCAAGTTTGGCGTTGCGTGTTGATACAAAATATTAGAGCCAAGGATGGTATCACATGTAAAACTGCAATTTTGCTATTTGTTTAAAGCAAATAAGAAATAAATATTTCGTTCTTATTCTTTAATTTATTTCATCAGATGGCTTTGTTATACCATAATTGTAAATCTGTCATATCTTAATTGCGCAATAGCCCAAGATTCTTGTATATTCTTACATTTCACAATTTATTTTCTTATTTCTAGTTTTAGAATTATA
マーカー_11676(配列番号22);A→G
AATAGCTACTCACAGCTTAAGTTAACTAATGGATTCTTGAATTTATTTAAGCGTGTAGTTAAGCGATTAATATGATGGATGCCCAGAATCGCTTTGTCTTATAGTTTTGTCTCGACAGAAAGGATGCATTGTTGTCTTGAATTTGTTCAAGGGAAAATTAAATAGGTTTCTTTCAATGACTCCTATTAAATTTTTTTGAATTTAGGCTTGCATTGCGTGTTCTGATCCACTATTAGCACGTACGGGTATCGCAGTGCCATGTGATGCAGCACTATGCAAAAACCACCTCCATGTCACTTG
マーカー_11933_A(配列番号23);A→G
TCTGTTGTAAGTTTCACAATCCAGTTAATTTAAGCTCAGCTTATTTGAAATTTTCAACAAAATTACGAAAATTACTTTCTCGGTTCATTTTTTTCAACCACCAAATATTTAGCATAATTGGCCTGAAATCGTCAAAGTTTACAAACTTTTGTTCAGCAATCTTCTCTTACTCTTACAATAAACATGATTAACTTGTCGTCATACCAATCTCGTTTATAGCAAATTCTTTTCAAAAAAACATTGCTACAAATTTTATATCGCATCATTTCAACACGCATAATTATTTTTCATATATGAAAA
マーカー_11933_B(配列番号24);T→C
TTCACAATCCAGTTAATTTAAGCTCAGCTTATTTGAAATTTTCAACAAAATTACGAAAATTACTTTCTCGGTTCATTTTTTTCAACCACCAAATATTTAGCATAATTGGCCTGAAATCGTCAAAGTTTACAAACTTTTATTCAGCAATCTCCTCTTACTCTTACAATAAACATGATTAACTTGTCGTCATACCAATCTCGTTTATAGCAAATTCTTTTCAAAAAAACATTGCTACAAATTTTATATCGCATCATTTCAACACGCATAATTATTTTTCATATATGAAAAACCATATTATAA
マーカー_12716(配列番号25);A→G
ATTAACTCTGAACCCAAAGACTGTTGGTTAAAATAAAGATCTATTTTAGTTATACATCTAACATTAAAGGTTTTCGTACGGAAACAAGTAGGTTTGATAATTTTCATGTAACTGTAAAGAACACCTGTGAAAGGGATCAGTAAAATTTGGGGGATGTAGCACGGAAATATGAAGCTGAGTGTTTTGTACCCAAAAGTTTTTCAAATCTGCGAAATAACGAGAGGTGTAATGATCGTTTTTAACCAAATTTTTTGATTCTAATCCTTCCCACAGTTTTGAAATTCAGTAAGCATTTCTTTT
マーカー_12925(配列番号26);T→C
TTGCAACAAATCAATAATAAAAGACTTGCGGCTAACAATATATTTGATTCTTTTTTACCGTTATTATTATGACAGGTAATAATAGTATTACAAGCATATTTGTAGGTGTCAATTTTTTCAATTCAAATTTTCTTAATTCATTATTTCTTCCTTTCCTTAATAAATAGTCTTTCCATTTAAGAATTAACTTTTTGAAATCTTTAATGAGAAGACACAAAAGATTCCGGATAATTTTGCATCATCTTTTCTATTTCGCGTTAGTATTTTATGTTTTCAACAGATTTTTATGATTTAACTATA
マーカー_13063(配列番号27);C→T
GATAAAATGGGTTCTTGTCAAGCTCATTTGGCATATCTTCGTCTTCTATATTTATATCCTTTAATATCTTCTCTTTTTTCAAATTTTCCTTCCCGACGTTTTCCATATCGACCTCTTTCTTCATAAATTTATCTTCCTCATTTGCCTCATTTTTTGACTTTTCATCCGTTTCATCCTTATTTTTCTTTTTTTCATCTCCTATTTTACCTTTTCCTTTATCAACTTCTATCTTAACTTTCTCAATGTTTTTTTTATTTTCTTTCATCTTTTTGTTTTCTTCTATTGACATACTATAACAAA
マーカー_15000_A(配列番号28);T→A
TTTTACGAACAATTATTTCATAAAAGATTCGTATTTTTGATTAGTTTTTAAGAATTTTTTTTTATTATTTTTAGCCAACAAATATATTTTTCAAAATTGTTAAATTTGAAATTATAAATTTCAACTAAAAAAAAGCAAAAAGCTAAGCCAATAGAAATAACATACATGTGTAATATAAAATATAAAGTATTCGAAATGAAAATCAAAGTTTCATAACAAAAAACAAAAAATATTCTAACCTTTTAGATTTCATCAAAACTTCACTAAAAAGTTAAATTTAAATTTTCAAATTGTTATACA
マーカー_15000_B(配列番号29);A→G
CGAACAATTATTTCATAAAAGATTCGTATTTTTGATTAGTTTTTAAGAATTTTTTTTTATTATTTTTAGCCAACAAATATATTTTTCAAAATTGTTAAATTTGAAATTATAAATTTCAACTAAAAAAAAGCAAAAAGCTAAGCCATTAGAGATAACATACATGTGTAATATAAAATATAAAGTATTCGAAATGAAAATCAAAGTTTCATAACAAAAAACAAAAAATATTCTAACCTTTTAGATTTCATCAAAACTTCACTAAAAAGTTAAATTTAAATTTTCAAATTGTTATACAATGAT
マーカー_15709_A(配列番号30);T→C
TCAAAGACAAAATGAAGAACTTAACAAAAAAAAGGCCAATAAATAAAGGCTATTTCGTGAAAAATCTAAAAAAAAAAAGATCTGTTCCTTTCGAATCAAGTGATTCTTCCTACTACATTCGTGTTGTAATTCTTACTTGTATACAGTCCCCAGTTTTTCGACGATAAAAAACATTTCGATAAGTGAGTTTGAATTAATTGAATTTTAAAAGATCATAAAAATAAAATCAAAATAAAAAGACCAAAATTAAGTCTGATAATTCCAGAAAACACAATAATAAATATACAAATAATAAAAACT
マーカー_15709_B(配列番号31);T→A
AAATAATTCACTAATTTCTCATCATCAAATTATTTCGTACAATCGATAAATCAACGATTATAATAGCGAAGAGAATGAAAATTAATGTGGTGCACAGTATACGGACCCCATATACAATGTTCAACAGAGATGAACATTTTTTTTCTATTAAAGTTTTCTGTTCGGCGAAAGAAAGACACTTTCTAACGATGCTTTCCTCCCAACTCCCCTTGCAATGATAGAGGATGCAGCCAAGATTCGTCGACTCAAGCAGCATCACTCAACCGGCCATCACTTCGGGACCTTTTTCCCTGCCTTTTA
マーカー_17333(配列番号32);A→G
CATTGCGAATGACCGCTATGGAATATCAATTAGCAGATATTAATCGTGAATTAAGCACATTGGTGGAATTTTTACGACCAAATCGAATTTCAAAAAATGCTACACTTGCAACATCAGCAACCATTGCAACATATAACAGTACTTCGATGCGTAATGTAAAAAAGAAATGTAATGCATCTGAAAGCTGAAAATTCATCTGATATATTGAAGCAAAAGGTAAGATTATTTTTAAGATATCATTCTTGATGCTCTCATAATTTCTACATCAAATTTAATCAAACGATTCATTTATGTTCATTT
マーカー_18110(配列番号33);C→T
TTCTTGTTGTACCTATCATAGATGATAACTTAAGTACCAATAGCAATAGTGCAACGATGCAAGGATTCTGATTAATGATTATAAAAGTTTAACCAATCTTCTTCATTCCTTCTAATCAAGAGAAAAAAAAATGAGAACATTTTTATGACATTTGAAGAAAGGCAATTTATCGCTGAAAATTCTACTGCGATATGGAAGTATCAGATAGAGAAAATAAATATTAAAATATGGATTTCATACGAAAAATGATAAAAGATAATAATTTACATTTTGGTGCTTTACTGATATGATTGGAGTATT
マーカー_19999(配列番号34);T→A
CGATATTTTTTGGACGAATCAAACCTTTTTGGGAAATCATTTGATGTCACAAGCATGGTTTGAGAAATTTTTTTCCGAATTAGTTCTGCTAAAAATACTCCAAATGAGTCTAGTGGAATTAAGCTAAGCACCTTAAGTAAGTTGAGAAAAACGTTTCCATTTGACTAACAAGGCTAGTATATCGACATGAGACAGAAATGGTTATTACTTCACTCACTTCATGAAGCGAATACGAAATATCTGTTCACTTTAGTTTCAATCTACTATTTTACCAATAAACGTGTTCTTTTCCGGATAAAT
マーカー_20570(配列番号35);T→C
TCTTAATTGATTTTCTTAACTCGAAACACTTGTCTTGATTACTGTGCTGTACTTTATCTTATTAAATTAAATAATTTCCATGACCACTTCATACCATTGACCATCAAACTTTGATGAAGTTTATGTGTGAAGTGCCAAACAATCATTCATCCCTTCAGTTTAACTTATTGCTGGTCAAATTCATAAAAATGCAAATTATCAAGCAGATAGTAATTCAGTGAACGTAGCGTATTCTCGAAATTTCTTTCCTTGTATTTACCTTATATAGAACAACGTATATTTGTAGCATATATTCAATAT
マーカー_20587(配列番号36);G→A
TTTCTGAGTTTGCGTTACAGCGCCAAATCTTCACGGAGATAGATAAAATACTTATCGTGAAATTTTGGCGCCATGATTTAAAAAACACGGAGATAAAAATAAAATGCTTATCGGTGATAATTTAGCGCCATAATATGAATGAATTGAAAAAACAATTTGAGTAGAAACATGACATAGAGTTTTCGTTTTCTGGCTACGAAAATGGATGAATTTTTCTGGAATCGAATTCAGTCAAAGAAATAGGAACGTTGTTACTAAATGATCGAAAAGCTTTCTAAAATTAAATTTATGACGTCTAAG
マーカー_20698(配列番号37);T→C
ATCTAAATCTTCGTTTTATAGTGGTAAGACTTCCATTTGCTGCATTCTTGCAAATTAAGCTGTTGAAAATACTTTTTTTTTTGATAGATTTCCAATTTAATCATATTATAAGAAGAATTAATTTCGAATAGAATTTTTAAATCATTTAAACTTTAAGTTTTAAAACTAATATAAGTTATGCAGATTTCGCGAAAAAGTCTCATTTGTTAATTCAATTATTCCAAAATGTAATAATTTTATAAATTCAAATTTAAACTACTACTAACTTCTGAAGTCAGGAGCCAGTAGCAACAACGTAAT
マーカー_21554(配列番号38);A→G
AACTTTACATTTATATTCAATTTTTTTTTATTTTGTTTGTTTTTAGAAATTTGAAAATGGGTACTAATCAGTGTCATTTGCAGCCTCTTAGACCCTCTTTATAACGACCGATTCGATGAAATACGTCATCAATATGCCAGTTTATTGTTCGGGTGGAGAATGTTTTCAAAAGTTGCTGAAGTGATGAAGTATAGTGAGAATGCACCTTATTCAGCACCATTAAGAAGTAAATTTTTGCTTTGGAATTTGACAAAGACAAAGCAGGAAGTTGACAACGATGTTCTGATGAAACGGTTTCGA
マーカー_22174(配列番号39);A→C
GTCTATTTTGGCTGTCTTCTAATAATTCATTTTGTAACCTTTTGAAATATGATAAATGTAGAAATTTTTTCTTCCTGGTCTATAATAGTTTAATAATGTGTTGTAGTAATAGTTTTGGTGCCGTTGAAATATTTCAATGATATGCTATCGCAAAATTAGGAATTCAAATCAAGGTTACAAGATAATTCAAAAACAAACAACGTAAAAATGAAATAATTTCTTCTTCTTACTTACCAACAGGCATATCATCATCATCCTCAAATTCATGACTATATTTAACATTGTCATATTTGAATAATC
マーカー_22254(配列番号40);C→A
CGACGCAAAAATCTTTCAAATTGTCACCCAGTTCTCTAAGTGATTCCAATGATGTTGGTAAACATTCTGCATGATGTACCGGGTAATGAACTACCAAGTTGTTTTTTGCTTTTAATACAACTCGCAAAGATTCTGAAAACCATGAAATTAAGAAAGATTAAAATAATCTGAACTCTTTTTTTCATTTTTCCTTGAACTTAGCAATATACTGAGTTGGATAAAATTTAGAAACGAAATTTCGCAAATTTATTCAGTAAATTCAGGAAAACTCGGTTTCGGTATTCTAAATATAAATAGATA
マーカー_22259(配列番号41);A→G
GTTTCTTTGGTTTATCTCAGTAAGATTTGGGCGGAAATTTCAGTTATACTTTTCATTTCCATGTGCTGTTTTAAATTTCTTCCATATTAGTATAATTTTCAAATAATTGTAGCGTCACTGGTTTATTTAAGGATAACAGGTTGGACTGCAGTGGCTGAGAAGTGTCTTGCCGGTCAATTGTTTGTTGGTGATCAACTTGTACGAGTTACTGATATCGACATATATAATACACGGCAAATTCCATTCGTTTTCAGTACTGCATCAAAAACGGGATTATCGGTACTTTGTAAATCGCAGTAT
マーカー_24708(配列番号42);C→T
GACCCCTGCTCACAAGGCAGTTCCCACAGACAATCACACATCTAATCACACACATCAACTCATCCGACGTAGGCTATCAATAAGGAAAATTGCATTGCTTTATCGTCTAACTGTAATAAACATCTACATAATGAAATTATTTCGCCACTATGACAACTAATATCGCCCAATGCAAATATTTGTCTCAGAGTTATTCCCTTTTAACAGCTGTTGAACGAATAGATAGGACGTCATGTGGATGATCTACTTGTTTCAAAGGTTGAGGTAACACATGAAACACATGAAAACGGTAATTTAAAA
マーカー_25276_A(配列番号43);A→G
AAAGAATGGTCAGCAAGATGTGGAAAATCGATTACTATAGTTGAAGTATGAATCGAAGAGGTTTTTTTAAATTCTAAGAGAACGAATAATCGGCAAAGAGAAAGTTGAGTAACCTTATTTTGCCTTGTTTTCAGTCAATTTATAATATGCGGTTAATTGTGTTAAAGAAAGTACAAGGTATGAAATCTAAGCCAAGAAATAAGAGAAAACAGCTAATGATTATTTCTGCATTTTTTCTTTTTCGACACAAACTTGGAACCAGAATCAATTGAACTAGTAATCAGATTTTGATTATTGCTT
マーカー_25443(配列番号44);T→C
TTAGATTTTGCTGAAGCATTGTTGGTTAGATCGATGAAAATATAATTATGAGAGATTTTGTTGAAATTCAGCAACAAAATTATTATTCATGTCTTCATGCTGTCAGTTTTGTTTTTATTTCTTCTTTGACATCGGTTATATTTTTGTCTTCCAACAATATAAAAAAAAAATTATAATCAATTGGTAATCAAATTAAAACTCTAATTGTTAGCTCCCTAAATCAGCTTTAAAAAAATAATTGCTTAATTGGTATTTGCTACTATTAGCAAACTGAAACTATCCTTTTCTCGAATGGTGAAC
マーカー_26447(配列番号45);G→A
ATGAGCTGATATTTGATATGCATATTAAAAATAGGGTAAATTACATTAAGTTAGATATCGTTCGGATAAATTAATTAGAAAAAATGTTTACCAATTAGATCGCAATGATGTAAAATTTCACGTATTTTTATTCTTAAGATTTATTTGCAAAATTCAAAAATATGTCTTATGAAAAATAATATTTCTGTGTAAGAACAAGGGACCGATTCACTTGATTTATTCGCAAACAATCGAAATTCAAAATTAGTAATTTTAAATATTGCTTTATTCAAACCATACCAATAATAATTTGAGAGATTT
マーカー_26730(配列番号46);A→G
ATTGATTGATTCAAATAAGAAATTTAAATTATTTCCCCTTTTTTTCAAAAGATTTAACAAATATTATTTATTTGATCTCCTCGTTCGTTCTTATCTTTTTGATTATCAATCCATCCTCCTCCATCATATAGCTAATTTATTTTTTGCATCGTAAATCAATTGATGTATGATTGATTTCTTGATTATAAAAAGTTAGAAGAATTGAATTGCTTAAATTTAATTATTGATAATGAAATATTATTATATTTCAAAATGATACGAAGAAATATGACGATGATAAGAGAAAATATGATATTTATC
マーカー_26974(配列番号47);C→T
TACGATAAGTTATTTTATTTTACACATCTCCATCCTTGACTAGTGTCCGTGCCGACTGTCGGACTTGAACCGACAACCTACTAATTACAAGTCAGTTGCTCTACCCAATTGAGCTAAGCCGGCCATCTAGAATGTGCGACCCCGTCGTGGTACATCTTCTATAATCGTTTGGTATTCAGGACTCTCTTCTTTCGTGGGTGGAGGATCTTGATACAGTTGACTATTAAAAATAGGGCCTTTGTTAGTCTGTTACAACTCATAGACAAAGGCGACAATTTTAGCTTACATCTTACGTTATGC
マーカー_27080_A(配列番号48);A→G
ATGGTAGAAAATTATATGAAAAAATATCATACTAAAAATATAACAGATTGTTATAAGGTATGGTTTAAGAATTTACAACAATTGATTATTTATGATAAAAAAAAAAAAAGTAAATCAGTGAATCATTAAGATAGTTATGATAAGCAGTTTGTATTCGGTAAAGCGAATGATTAGAGGAATTATGGGACGAAACGTCTATAACCTATTCTCAAACTTTTAATGAGTATGACGTGTCTTGCTTGCTTAAAATTATTTCAATGATCATTTCACTTTACCAGTATGATCATGATTAGACTTGAA
マーカー_27349(配列番号49);T→A
TTAGTATCGATATTATCACAAATGATATCACTTTCATCAATACTGGATACGATTTTATTAGTATCATAATTTTGTGGCTCGCATTCCGAAAGTTTTACACGTAGAAGATTAACCTGCAATATGATTTATTTTATCATTTTCGAATATCCAACTTTGAAATAATTCGAAAATGTTGAAAAATTTTGAAAAATTGTTAACAAAATATTACAAAAATATCAAATGAAATTAAATAACTGTCCATTTCAAAAAAAGAAGAAAAATTATGAAATTACCAATTAAAAACAGGACTTATTAATTAAA
マーカー_27461(配列番号50);G→T
TGTGGAAATAAAGTACAATTAATTGCTGTTCGCTTAATAATATTATTTTCATTCTTGGCTTTTTTTTTCTTTCCCCGTGATATTATAAAATATAGTTTTTTAATTTTAACAAATCGTCATAATTATTTAAAAAATACTGAGGTGAGTAAATGTAATTGGTTGCTGGAAAAAAAGTGGGTGATGAGAGGTGAATGAAAGCAGAATAGTTTATGATTGCATCAAATTTCCTCCTTAATCTGTGATTAAAATCAAACAAAACCCGAAAAGTTTCTTCTTCGCCTTTTTCTTCTCTTTGTTTCA
マーカー_29128(配列番号51);T→C
CGAAATCCGCCGCGTGCATTACTTTGCGCTTGTTGATTACGACGCATTTGTTCGTCGTTGATAACCTTATCAATCATCATACGTCCGTTACGTATGCAATCAACATCGCCAGTTAGGCTGAAATCAAATGGATGGCGATGATATCAAAAACAAAAATAAGGAGTATTTGCTGAATCATTTCTTTTTCTGTATTATTATCAAAATTTTCTCCTTTCCATTGTTTCCTTCTTAATCAAGTGAATGCTCATTTCATTTTGAAATAATCCAACGTAATAATTCCCCATATTCCCAATTACTTTC
マーカー_29168(配列番号52);A→G
AGAAATATTAAACTTTGAAAAGATGTGACATGTTCTGTAACAAAAGCCCAAAATTTCGACTGCTGCGGCTTGAAGTAAAATTTTGGAATATGCTACATCAGTAGTGCAACAGATGGTTCGATAAATAGTGGTAAGTGATGGGAATCCTAGGAATAGATGGGAATTGTATTTCAGATATAAATTTGATGCATATTTTCATAGTTGATTATATCTACGATCACACGTTGAATATTCTAAAAGCAAACTGTAATTAACTAATTGAATTTGAAAATTTCCAAGAATTAAAATTGGTAACAAAAA
マーカー_29455(配列番号53);T→A
ATTGTCAGGAATGAGAAGCAAGTTTTGGATACTTAAGGGATGAATGGAACACATACATGGCAGAAAATGTTAGTAATCAAACCATTTAAATTACTTAGCCACTATGCTAAACTTTCTAGAAGTATGGTTGAACGTTTAAAAACCTTCGCAAAAATTGTATTAGATTATCTTAATCTTCCCTACATCAAAACAGAGAATTTTTGTTCTACGACGTGAGTCTGCATGTATTAAGGAAGTTCGTATCATGACGTAAATATCCTGAGTGATTATTGAATTCAGAAAATGAGCTTTTTCATTTGG
マーカー_29816(配列番号54);G→A
ATATGAGTGTTACATGTGTACGTTACATGTAAATATTATATGTTATATGTAAAAATGTCATGTATAGCATCTATTCACGTGTACGTACACGTGTATATACATATACATTGATACTTAATACGTATACGCATGAATGAACAGATATTATATATTTACGTACACTAGACTCACATGTACCTCTGTATACGCATACATGTACAGATATATGTTTGACATACGTAAATTCATATATGCTTTTATTTATGCTTATATTAATTGTCACATACATGCCTTATATTTTCGTTGTTATAAACACATAAA
マーカー_30575(配列番号55);T→C
GAAAATAAAATTAGCTGAAAATATATGCGAGGTAAAGCACACAGAAGAATTAACTTAAGGTAATATATTGTAAGAATTTTTATATTCGGCGCACCTAATAATTTTTAGACCGCATATGCCCAGTATTTGAAACTGGTAGCGCTGTTCGTACTTGCTGTTGTCCATGTTATGTATATGATACCATTCCTAAATACTTTTGCGGCTGTGGTTTCCAGTGTTGATGTGACTGGTATGATGCCTAACACTGGATCCTTCCATCTGCGGCATTTTGTTGAAATTCTTATTGATGTGAGCTGTTTA
マーカー_30991(配列番号56);A→G
CAACTGTGAATCATAAACATTACTTAAATTAATGAAGCTAGTTAACGACAAATATATTTTTTTATGTATCAGTGCTATCATATAACATAAAAACTTACTTTCATTAATAAATGAGCTCAAATATTGACTTTTGTCCAAAATGCTCAAAATGTCGTCATAATATTTGAAATGAAGATAATTTCACGCTTTTCGAAGCCTCCTCTCACGTCTTTTAATCTTCTTTTCTTCTTCTTGCTCTAATGGTTCTGCGAAAAACCACGGTGCAATAATCACTTTCCATAATTTATACAGTACATAAGC
マーカー_31796(配列番号57);A→G
CTGCTTAACTCTTTTCATTTTTCAGAGAATCTTCTCTAAAATTGTGAATTGATCCAAACCAAAGAATATGGATAATGTGATTCGAATTCCTGGAATTTAGATTTTGAGAGTTTTGAAGTTTTTAAAGAGATTGAATTTCTGTGACCTTCTGGTATATTTGATGTCATTTCGGGATGCGTATTTTTGCCGAAAATTTTTGGCCTCACTGCAATCTTGTTAAAAGTCAAAAAAATTCAATCGTAGAATTTCGGGTTTACCTGATATTACTGGAAATCTCTGATCTTTGTTCTAGATTGCTGT
マーカー_32164(配列番号58);A→T
ATAAAGAATTTGCAACTCTGTATACCTTTTTGCAGTGCAAAAGCGGATGAATTCTTCACTGCAGTGTGACAGATTCCTTTGATAAAATTGCTTCGTTCTTATGTAAACTTGGAAATTCTCGGTAGTTATGCTTTTGCTAGTTGAAAATGTTCTGCTCTTGTAAAACATGCAAAAAGAGATTATCTTTGTTCTATTATGGAAAGATTCTTTTGAAATTTTGACGACTGAGAAGACAAATTTTATCCCAACTTGTCATCTGCAATAAAAATTTTTCCTGACCTGTTTCTTAACCTTCCAAGT
マーカー_32223(配列番号59);T→C
AAAATCAAATCAATATGATCAGATAACTCATACTTATCTTACTGAAAATTCCTCATTCAAGGGAAATAAATAATTGCAATTCTTGATTCCGATCATGGATGATTTTCAAGCAAATTACCAATGATATCTATCGATAACGATTACAGCATACAGCTATAACTTATTATTGATTGAATTGATGAAAATAATTTTACCAGAAATTTATCAATGTTTATCTCATTGCAGTATACGATGTTTAGTGTGACAACACTTTTTCTTGGAATAATTGTGCATAAATCATTGATTGCATTTAGTATTGGA
マーカー_34439(配列番号60);T→C
TCCTGCCCACATTCTTTCTACTTTAGATAATCAACAGGAGTTAGTTGAAAGAGAAGACTAGGAACAGTTGCAACTTCTGAATCTTTCTGACTTTCTTTCGTTTTGTAAATTATTTATTTGTATAAATTTAAAATTCGAAGAGAAATAATCCAAGGTCCAACTTCTTTTTCTGTTAGTTCTTGCGAATGCTCCATCAAAATGCAAAAATATGATTAGAATTCTGATGGAAATTAACAAAATCGATTAGATAAGAAAAGTACAAAACAGAAACTAACTTTTTCTCCCATTTTCATATTATAG
マーカー_34903(配列番号61);T→C
TCATTGCTTTAATACTTTTTAACGAGAATTTTCTCGATCAAAATAAGATCTGCAATTGATATACGTCAATAAGCGAACATTAGCTGTATTACACGCTAATATTCACATATGATGAACGTTGTAAGCGTCATACATCAACATATATCCATCCGATAAATAATGACCACTACACATTGCTACCAACCATCCTATCCCGCCACTATTTGAAATGAACTGAGAAGGAGTTATCGACACAGGCTTCCTAGCAACCAAACAAAAGACGAGACAGATGAATAGATAGACAGACAGACGAACATACAA
マーカー_35336(配列番号62);A→G
AGATTCTGGTTATTATTGTATTTCTGATTTATTTAATCCCAACTTAAAGATTCATTGGCTATTGTTTAGCATCTATATCAATTTTATAAATAAATAGTAATACCTGATGAAAAGCAATAAATAATTAGATGCAAATTTTAATTAGATACAGTTTGATGGAAAACATTGAAGCCATGTACAACTAATTTATGCATGTTGAATTATGCATGCATAATTAATTTATGCATGACAGCAAGTTTGGTATAAAATTAATTTTGTATGAAGATAAAATTTTATAAATAATGATAATAATGCTGGTAA
マーカー_36040(配列番号63);T→C
ATTATTGAAAAGAATAATGTAGCTAATTAGTTGAAGCTGTTAAAAGTAAAGCTAAAAAGATGATGGAAATTATTCGTATAAACATTCTTTGTAAACAAACAGTCATTTCTGTGAATAAACAATTATAATTATAAACAATACTTTTCAAGACAATAAAAAAATTAGGAAGCATTGTTGTGATAATCAATAGTTGATAGACTGTCAATGTATTTTTATCAGTCGTGCTGCTTTTTTTCCCTTTCTTGACTCATTTATTTTATTATTTATTGATAGAATGTCAATATTCTAGTCATTTGTTAT
マーカー_37881(配列番号64);T→C
ATCTTAACTTGCTTTAAACAAATAAATTAAAACAGCCCAATGTTCCAAGAAAAAAAGATAAGTTAAAAGTGGGGTGTCCAAAAATTTATGAATTGAATTGGACAGTTATTCAGATCCTGAAAATACGCTTCTCTGATCACTGCAAATATTCCCGATAAATAAGTGAACATTAGGTTAATCTTAATTTTCCCTTAACTTTCCTTAGCCTTTTTTAAATTTTTGGATTATTCAAGCATTTTTATTGCGGTATCGTTTTTGTAAAAAAAAAAGTATAATTCAACATTCAGGCTCGACGTTATG
マーカー_38622_A(配列番号65);C→A
AATTAATAAAAAGAAAGGAATACGATAAAATATCTATTTTTTGAAACTAATCAAACATATTCCTCACTGCTCACCGGATAGTTGCTTTCTAATTTTACATTAAGAAATATATTTTTTTTTTTCAATAAGGAAAGTTATGCAGACTAGGAGAATTCTACTCTGAAGAAGAGATAAGCATGTTAGAATTATTAAAATCTATGGAAATATCCTTAAAAGAATGCCTATAGTAGCTCTGATTTCGAAAAAAAAAGCAAAAAACAAAATAACAAATTCTGCTCAATTGAAATAAAAAACTTTCCT
マーカー_38622_B(配列番号66);C→T
TAAAATATCTATTTTTTGAAACTAATCAAACATATTCCTCACTGCTCACCGGATAGTTGCTTTCTAATTTTACATTAAGAAATATATTTTTTTTTTTCAATAAGGAAAGTTATGCAGACTAGGAGCATTCTACTCTGAAGAAGAGATAAGTATGTTAGAATTATTAAAATCTATGGAAATATCCTTAAAAGAATGCCTATAGTAGCTCTGATTTCGAAAAAAAAAGCAAAAAACAAAATAACAAATTCTGCTCAATTGAAATAAAAAACTTTCCTTCAACTTCCAGCATCACTGCTGTGA
マーカー_38622_C(配列番号67);C→T
AACTGCTAAAAAATTGAAACTAGTGTTAGATTGATAAGTGGGCAGATTAAAACCAATTGTGTTATTGGCCCGTTAATTAGTGACTCTGAATAGCTATGGCGAATCGTATAGTGTTGTACCGACGACGTATCTATCAAATGTCTGCCTTGTTAAATTTCGATGATAGTTTATGTGCCTATTATAGTTGTAACGAGTAACGGAGAATAAGGTTTCGACTCCGGAGAGGGAGCCTGAGTTGCCACATTCAAGGAAGGAAGCAGTCGCGAAGATTACCCACTCTTAGAATGAGGAAAGAGTGAC
マーカー_38622_D(配列番号68);C→T
GAAAACTAAGAAGTAAGTGAAATTTCTAAGTTCTTTCCCAGAAAGGTTAGATCCAATATTTGTTTTCATTTTAGCATTTTTATCCAATGAAAAATGTGCCCAATAAATACTTGTATATAGTATTGCATTTAAAAACTTCAGAAAGCACAATGAGATCTAAGCTCAGAAATATGACGAATACCAATCCTTTTCCTAGTCTTACCGCTTCTTAACTTTTGTGTCGCTTTATAAAAATTAAAAATAAAAAGTTGAACAATGGGAATTACATCATTTTCATCTGAATGGTTTATTTCCTATTCT
マーカー_39492(配列番号69);T→C
CTTCCCTAGCTATGCCTTTTCGTCACTTAAGCTTCNNNNNNNNNNTCTAGCTACGTATCGTTATCATTTATGCTTCTTTAGCTACGTTTCTCCATCATTTATGCTTCCTAAGCTACGTATCTTCATCACTTACGCTTCCCTAGCTATGTCCTTTCGTCACTTAAGCTTCTTTGGCTGCGTGTCTTCATCATTAATCTTCTTTAGCTACGTATCGTTATCATTTACGCTTCCTTAGCTACGTCTTTCCATCATTTATGCTTCCCAAGCTACGTATTTTCATCATTTATGCTTCCTTAGATA
マーカー_42291(配列番号70);G→A
GATCTTAAAATTCTATGAAACTTCTTCTGCATGGTATTGTTTCCAACAGAATATAATGACAATAGCAACAGTATTGGTTATATAAAAATATTGACTGCAGCAGGATTATATTTCAAGTTCTTTTAATTTCATTTATTTATTCTTTCATTTACTTTTACTGTTTTTATGTTTTTCTTCTTTAAAAAATATGATTTCTCTCACTGTTCTCTTTCATCTATCTATATTTATTTGATAATTGCTTATATGATAACTAGCTAAAGGGAAATAAACTTTCAGTCATCATAGCTTCATTTTAGTAAA
マーカー_42411(配列番号71);A→T
CTATACTAATCAGTCCACTATCCATTTTTAGGTTGCAAAAGTTGCAATGACGGTTTGATTTCATCCTCCAATGCAATTTTGAGTCTCAATCTCGAGAGATAGATCGATCGCTTTTAGCTTGATTTAGCTTGGTTAATGTTGTGAGGGATATTGGGCAGAAATTCTGTCAAGCGTTACTTAATGAAATAGTAAATGATCACTGATATTTATTGTTAATGATACTTGAGCTCTCTAGATTATGAACTGGAAGGTTTTCGATAGAAATAATCGATACATATATTAGAATCGACTTCTTTTTTC
マーカー_45689(配列番号72);A→C
TCATCTTTTTCACATTTCATTTAATCATCATTTTATCAATTCCTATTTTTAAACAAATTCTTTTCAAATATTCTCTCTTTCCTTCTCTTTTTGTTTTCCGCTTATTCATTCTAATGATGAACAGATGTAGAAAATTTGCATTCTATTGCTCACTACAATTTTGAGTAGAATATATTTAATTATTTGATTCGAGACAGATGGTTATAGCCTTTAGCTTCAGCTTCTCGTTCAAATTAAGTACTTGTGACCTTTCCAAGTACCATTAAAGCTTTCCTGCGTTTCCTAATTAGAAAAAAAAGG
マーカー_45719(配列番号73);G→A
GCATTTTAAGTTAAAAGTATCACGCTGCATGACACCTCACGTTTGCTATCTCAAATTGAGTAGGTTAGAATCTTTTTTTGGCTACTATTCAAATATTAATAATAAATTGCTGCAAACAGATTTCACACCGGAAAAAAATTAAATTTTTCTAGCAATGTTTTAACTCCCTTATTAAATATTTATAGAAAATCGACTACTTAAAAAGAATTGACTAACATTTCTGAATCTCTGCAGAGATTTATAGATGGATTAGCATCCTACAAGTTTTTATCTTTTTGCTATATTTCCATTATTTTTTTA
マーカー_46063(配列番号74);T→A
GATAAGACGTCTTATTTTGTAATAATTCAAAAATTAATTAATATAGAAGTAAGATCTTGATAATAATTAATATGCTCAAATTTCTTAATGAGAATATGTTCAGGATGAAGATGAAGTGAAAGAAATTGATAGATTGAGGAAGCAATTGCTAATTGAAACAGAACAGCTCGTTTCCAATTCTCTTAAAGATTTACTGAAGAAAATTTATTATCCACTTGAAGAAGCTATTGATCTCAAAATTCATCAGAAATTAATTCAACAAATTGCTGCCTTGTTGAAGTGTATTAGTATCTTGGATAA
マーカー_47481(配列番号75);C→G
ACCGCAAAATACCTAAAAATTTCTATAACAACGATTAACACGGCCTCGAACTGGAAGCATATTAATCCATGCGTGGCTCAAACTTCAATCATAAAGACAAGATCTAGAGATCAACACAAAATGGTGAATTGTTACCCTATCGTTGCTAAAGTTTGAGAGAAAAAAGTGCTAAATCAAGTAGTACACCAAATTTAGTTAATATTAAGAAATCAATTTAGTACTGAATTTAAACAAATGAAATTTTACGATAAAATAAAAAAGTACCTGATCAAACAGCGTCCTCCCGTTATTCCCATTGCT
マーカー_47722_A(配列番号76);C→T
TATAAGACTAGTAAACAGATCGTAATATAATAAATATCGATTTTATTTTAAATTTTCGAAAACTTCCAAATCTATCGATATGAAATTAAAGATCAATTTTTAATTTCCATAATATATTTAGATTCTATCCCAACATCACTCATCTTTATGTCAACTTATTTAATTCTCTTATTAACATTATATTTCTTGTTTACAATGATAAATTTTATCAATTTTCTAATATGATAGAACATCTTCATCATCTGAAGATATGCTTTTCTCATCTTTGTAACAATTCGTATCGCTTCTGATTTTACTTTC
マーカー_48750_B(配列番号77);G→A
GTTTTATTATTGCTTATTGAATAGTGATAATAACACTTTGATATGATATTGTTTTGTTGCGATCATTGTATTGATTATAACCTTAATTAAACGAGGATATTATGGGAAATGTATTTATTACAAAATTAAATATGAAAGGTTGAAGTCTTGACGAAACTTTCAAACACATTTCTCGAATTTTCTCTGCAAAAATATCGTTACGATTTTTGGAAATTATGAAGTCCAAGAATTCAATCGAGAGTTCGCCATGTCACTTTGGCTAGTTTCGTTTGTTTTTAATATTTCAATCAAAAGTCAATT
マーカー_48750_C(配列番号78);G→A
CCTTGGATATTGTTCTTGACATCGTTGATCAGAAGGTCACCGTAGTGTTCGGTGAGCGAGATGGAATTGGACTCAGGTTTATTCTCCGTTTTTTTCATGTTTTTGAATTTTAGAGAGAAAATAATGTTTGTCTGAATGGTTAGCAAACTAATTAGTTTTTAAGTTATCAGGAACTCGAAGTATCTTCTTTTGCACTTCTTTAACCTTTTTCATCAAATTTTTTAACAGTAACAAGATTTTTTTGAGAATTTTCAAAATATTTTTGACTTCTGATGATATTTGATGAGAAAACCATCACTG
マーカー_48790(配列番号79);A→C
AGAGTATTATTATACATGATGATGATGATGATGATGATGATGATGATGATGATGATATGATGATGATGATGATGATGATGATATGATGATGATGATGATAATGATAATGATGATGATGATGATTAATTGCTTATTTTTAATGATTGATAACTTTAAAAGAAATCATTGAAATTTGATCGAATAAAAATTTTCTTAAAAAAAGCATTTGCTATTTATATAGTAAACCTATAAAAAATTACTTATTTTTATTACTAATATTCATTTGATTGTATGAAAGAGAAGAGAAAAAAAACCTTTGCA
マーカー_49731(配列番号80);T→A
TGGTATCACAGCACTGGGTTTAATTTCAACAATCGGTTGACGATCTTTTCGGGATATGCCTATACCCAGAAATGAACGTATGCCAAACGATGGTATGTTTGATGCAACAGACGACGTCAACTTAAAATGTGTTTTTTTTTCAAAAATTCAATATTTTTAGTTTAAAATTGCACGTCAGTAAAAATTAATTCATAATAAATCTCTTTGATTTCTTCGTTCTCCTTTTTTTTCAGAAAAAATTGAAATTTTACATACCTGATTTCCAAGAGCATATAAAGCATCACTTAAAGCATTCTGCGA
マーカー_49824(配列番号81);T→C
TCCTTTTCATGATTTGTAGCTAACCAATAAGATGTGTATATGTTCATATATTTACTCTCCCCTGACTCTTTTACACTCTCATTCTCTCATTTGTTCATTTAGATAAGTAATATGCGCCTTTCTCTTCCTGATTCTCTCAATCTTTCATCCCTTCATCTCCTCAATCTTTCTCCCATTCTCTCAATCTTTCCTGCATTGCATTCATTGATGAAACACGATAGTATTAATAAGCATAATTTGATAAATTGAAATAATTTTTTTTNNNNNNNNNNTCATTCTCTCAATCTTTCCTGCATTGCA
マーカー_49904_A(配列番号82);A→G
TTTGAATTAACAAAATATTAACAATTACAACTATTTCGGAATTTAATTTAAGAATAATTTAATTAATCAATTTCCTATTTTGTATTTTAAAAATTACCACAATAATTATGTAATTTTTGGGATATTTGAAACTTTGAAAAAAGTGGTATTGTATTTGAGAATAAATTAATTAATGTAATTCTTGCTGCTCATCGTTCCATAACTTACAAATATTTCTCGGTATTTTATTTGAGATAATTCTTATCATTTCTTCCATAGCTTTCAATATATTTATAACTTATTTGTAATCACTCTTATCAC
マーカー_50378(配列番号83);A→G
TTGAGATATCAAATCAAGCGTTGCATATTTATAGTACACTGGTGTAGCTGAAATCGCGAAGAGAACACGAAAATCAGAGAAGTCAATGGTTCCTTTGTGTTGGATTTCACATGAAAGCATCCTTATGTTGTACATGCGTGATTACAATATGATACAAGATGTAAGCTAAAAATTGTTTTATCTTTGTCTATGAGATGTAGTTCATACTCTATAATAAAGTCCCAACCCTTAATTCTCATATTCACAACCGTATCAGAATCCAACACCAAACCATTATAAAGAATGTTCTTCGTCGAGGCG
マーカー_51565(配列番号84);C→T
CCACTATCGCTTACACTTTCTTTATCCTGTTCTTCTTCATCTTTCGTTTTGGACTTTATTTTACTGTCAGGTGACAAGCAAAGTAACGATGTTGGACTTTGCGAAGATGTGGATGGTACGCTAGAAAAAAAATGAGGATTGGTTAATATGTCTAATTATTACATCGCTTTTTTTTAAATCTTTTCTAAAATTAAACTGAATAATCAACTTATTTGCTATTCAGTTTATCTTATTTTTTATCAACAAAATTCGAGGAAACAAATCGCTTATCAGAATAATTGTTTTGATCAACAAATAAAG
マーカー_58162_A(配列番号85);G→A
CAATCCCACAAATTCAGTGTGTCGGCGGGTCAGCGAAGGGAAAGTTTGAACCGAGGGTATGTACAAATTGTGATAATTTTGTGATGACGTAGTAAATTTCATAGTTTTGCATGCTTTAATGTTGATAGTCGCACAATCCTACGTTGATTAAATTTAGCTATTAGATATCCTACTAAATTATGTTGTTCATAATTTTTGTTTTTAAAATGCTCCACTTATATTTTCAGGTTGTGCAGTGCTACAATAGGGGTTATGACGGCAATGATGTCCAATGGGAGTGTAAAGCGGAAATGAGCAATC
マーカー_58864(配列番号86);T→C
TCAGATAAATTGTATTTGATGTTAATTCAAAGAAGAAAAAAATAATCAGTAGAATATGAATCGAATAATATTCATACAACCAGTTTATTCATTATTATTCACTTTTAACGTCTAAATGACGTAGCTACGCTTTTTTTCTCGCTTTCAAGCCTTTACTGACCAAGATTAATGTACATTCTGTTGAACAAGATTAATCGACATTCTATCGATCAAGATCAAGCTTTTACTGATCAAGATTAATAATGACATTCTTCTGTTGATCAAGATTAATCGACATTCCATTGATCAAGATTAATCGAC
マーカー_62666_A(配列番号87);G→A
CTCTCTAAAACCTATTGGTCACTAAACTTGCACTGACTAAAAACTATTGGTCATCAGACTTGTGATTCATTGAAAAGACCGTTAGCCGCTAAAATTATGATTCACTAAAAAAAATCTATTGATCATTAAATCTGTAATCATTGAGAAACTACAATCATTGGTCATTAAGTTTGTGCTCTCTAAAACCTATTGGTCATTAAACTGACTAAAAACTATTGGTCACTGAACCTAGAGTCTATTAAAAAAAAAATCATTGTATCAATAAATTTATTGTTTACTATCAAATCCATTGATTACTGA
マーカー_62666_B(配列番号88);A→T
TCTAAAACCTATTGGTCACTAAACTTGCACTGACTAAAAACTATTGGTCATCAGACTTGTGATTCATTGAAAAGACCGTTAGCCGCTAAAATTATGATTCACTAAAAAAAATCTATTGATCATTAAATCTGTAATCATTGAGAAACTGCATTCATTGGTCATTAAGTTTGTGCTCTCTAAAACCTATTGGTCATTAAACTGACTAAAAACTATTGGTCACTGAACCTAGAGTCTATTAAAAAAAAAATCATTGTATCAATAAATTTATTGTTTACTATCAAATCCATTGATTACTGAATA
マーカー_7060(配列番号89);G→A
AAAATGTATCAAATTCTTCGATGCCATAAATTATACAGACTTGATTGGCATTTTTTCTAACTTTCATCATGAACCATTCTATTTCTAAATTGATCCATTACAAAATCAACTTTGTGATATCATCAATCTCAGTCATAACGAGAAATAATGATAATATAAAGCGACTATCATTTGAATTTCCTGAATATTCAAGATGTAATTACATCTTTTTTTTAATGTAATCAAAATTTCTTGCCATCAATAATTTTTCAACATATGCTTTCATCGACTGCCTTATGCAGATCGTAATGATGACAGCCA
マーカー_12056(配列番号90);T→C
ATTGATTAAAAAGAATCAACATTAAATTTTTGATATAGTCGAGAAATCCTTCGTGATAATTCTTTTAGAACAATTCTTTACACTAAACTTGTATTTACTTGCTTATTATTTGTCTAAAGATACTAACTATTTGTCAGTGGAATTTATGATCTTGGCATTATTGCATATAACGCTTTCCTAAAATCTGAAATTTTTCAGTATTTTAAAAACTAAGACGATTATTAAATATTACTCAAAGCTTAGAACTTTGATTATACTAATCAAATCAAAAATTTCATCAGCGATTTTTGTTGTGTCATT
マーカー_16261(配列番号91);T→C
ATTTTTTCCAGCAGAATTGTCATCAAAAATCCCATTTTTGATATCCTCTTCATCGAAACTTGCTCCTGAATCCAGAGAACAACGAAGAATGTGTAAATCTATTTCAGTAGCCTGCTCATTGTGCAATTCAGCGACTTTATTTCTGTGCTTCAAGCTAACTTCTTCATTATGCCACTCCTCTTCTCTCGCTATTTTTTCGCTATCTAATTCAAAATCTTCGTCTGAAACGGAATCAACTCCTGACGATGTACTCGACACTGATAATATTTTCATGCCGATTTTTCTCTCAAACGAATCTTT
マーカー_23195(配列番号92);C→T
GAATGAAGAGCAAAAAAATAGTCACGACCACCTGCAATAAAAACAGCATCTCCGTAAAAATGATTGAATTGATTCCCGAAATACGAGTTTATCAAATTGAGAATTATGCAAATTAATTATCAGCATGCAGATTTACTGATTTTATATCTCTCATACCGAAATTAAGGTGATGTTTTCCATTTCTTTGTTTCCACAATGTCTTCTTTGTGAATCGTTTTGGATCAACTATTAATCCGATCGAATCAATCCTCCAAATATGAGTTTATTCAACGTAACAAAACATTGTCCGAGATAATCAAA
マーカー_28579(配列番号93);T→C
TGGAAATTTCGAAATCGAAAGGATGAAGAAAAAGGATCCTTGATCTATACATTAAATATCACCATATCAACTAGCATGGCAAGTCAAAGTAATGTTATCATTTAAATAAAAAAGATGAATAGTAGGACTACAGGTTATATTGTTAAAAGTCGACAAATTTGGAGTAATTGACAGAGATCAACGATTAAATGTAATGGATGATCTTATCTTCTTTTTTCAACTACGCCAAAATGAAAATAACAATTGAATTTGTCGAATAAGAAACTAACATTTTGAAAATAAGATTGAACATTTATAAAT
マーカー_48869(配列番号94);G→A
GGTTGGATCATTATCGACAGAACTTTAGAAGTTTCTTGATAAGGACGAAAAGAAGCAGCACCATTGCTGATCTAAACAAGGAAAAAAGACCTTTTTTGGAATATTGAAGTTTTTACTGATAGGTGCGTGCTGTGTACTGTGGGCATAAGTACAAGCTTCATGCTCCGCAGCGTGAATACGTGCTGCATGCATACTATGCAGTAAAGGTGCGTGTCGTATTGCTCAATAAGTGTATAAATTGCTGCTTTTCTTGCATAGTTAAATATTTTGTTTTCATTTTTTCCGCTATTCAAAATAAAT
マーカー_53021(配列番号95);G→A
GTTGGGATTTCAGACTCTCACTCGGTGTCGTTTCACAGTGATATCTGAATCGAAGTCACAAGCAGGTATGAATGCATAACAACTAATATCCATTGCAGAAACAAGGCAAAACTGAGAAGCTCGAGCAATATAGCTATAGAAGCTGGTACCACAGATGACATTACATGGTATTTCCATTTCAGCTTCACAAACATTGTAAATAGCTTGCTTCGATGATTCAATATCTCGTTCTACGATATTCTTAAAGTAATTTTTATTTATTTGAAGTATAGATTACATCCATGTTCTATCTATCATTTC
マーカー_7986(配列番号96);G→A
TGTTCTGAACATCTCTTTTTGATTATCTTTTTTAATTCCTCCATTATTTTCGTTTTTTTCGTTGTGAATTAATATTGTTTGTCTTTGATTCAGATGATATTTTCGGATCGTAAATAGATGGCATCGGCATAAGCGTATTGAGAAGCATTCAATGGTGCACTCTTGCTTCTTTTTTTTTTGAAATCTTTCTCGATAATCAAATAAGTGCAGGATGCCAATCATTAACAATTTCGTTCCACTTTTTCAGTTCTTATTCTTATAACACCACATCTCATTTGCAATTTTGTCGCCAATGATTTT
マーカー_48094(配列番号97);C→T
TTTTTTCGAGGTCACTCTGGAAAAATAAATCATATTTTAAAAAGACATAAAATAAAAAATATGTATATATAAGAAAATTTTTACTCTGAATTTCTTAAGAAAATTCTCGATTCTGTTTTCCATAAATTCCGGAATATGTTGTCCCTGAATTAAGAATTCGATTCCTTGCACACCATTATTTCGTCTAGTTCCTGTGTGAACAATGTAACCTGGAAATGAACACATAAACTGTAATATTTTGAGCTTAAAATAATTATGAGGATGCGAAACTGAAGATATTCATAAATGTTTAAAAAAAAA
マーカー_6568(配列番号98);T→C
GTCCATGCATTGCTTTTCGGAAGTTAGTGTAGATTCAGTGAATATTTAATACCAGTCTCTTTCTAATTCAAAAGAGCCTCCCATTTCTTTTTTCAGTTTCAGTCTCTGAATCAGAGCGTGTAATCTACCACTCCATTGCCGAAAACAGCTCGATGTATTTCCTGCTACGTAGTGTTTAGAATTGGCGTATGCCACTTGCTCATTATTCGCGCATGAAGTGTAACTGTGAATAGAATGATACTACTGTTAGAAGAGAATGCGTTCACTTTATTTAACATTATACTGATTCATTTCTTCTTT
マーカー_17022(配列番号99);C→T
AGTGAACGAGAAAAAACAGAAGAAGAGATAGCACATCAAGATCGTGAGAAATTAATTAGACAAGAAAAAGCTCGTCTTACACAAATATATCAGGTTTTCTTTTTCTTGCTTTCGAAAGTTATTTGAATTATCTCATTTCTTTGAATTTTATAAGAAATAATTTAATTTTTTTTTGAAATTTTGCCTATTGAGCTCTAAATTTTGTAAAAAGTTTTCTAGGATGATGTTAGCAAAGCAAAAAAGAAATCCAAAAGTGATGGTAACAAACAGGAAGATTTTATAGTGAGGTACGATAATACG
マーカー_55751_A(配列番号100);A→G
TAGACAATATCATCCTTCCTTTTTTTTTGCTCAATTTCTCTGCTCATTGCTTTGATGATAATGGTAGGTGGTATAATGAAACGAATAGATAATTGATGTTCGCAAACATTTGCTGTTAAATTTCAGTAAAGAAATTGACCTTTTTGCTTTGTGTTGGATGTTTAGCTTCATTTTCTTCTTGTTCATTGTCATATTCATTCTCTCAAAACTTCTTGCTTAGCGATGCTAATATAAATACTGGAAGAATGCCTTTGCTTTGTTTTAGTTGTAAATCATCACCAAGGTATTTTTTTGCAAAAT
マーカー_55751_B(配列番号101);A→G
AAGATGAAACTAAAAAAAATTATTTCGAAAAAAAGAAAATAAAATTAATGAAATAAAAGCAAAAATGAACAAACCGTATTAATTTTAAACAATAAACAATATCGAAATCGAAAAATGGACTATTATTGATGAACTATATTTTCAAAATGTGAAAGGTCAAAGTTTGTTTCAATTATGATAAATACAATTTAAAATAAGATTAAGCTAACAAATAAGTTGAGCAAATTGATGAAACAAACAAATCAGAATATATTACAGAAAATGATATAACATGAAAATATATTAGACCAATTATTTTTA
マーカー_15893(配列番号102);T→C
TTGAAGTTTTCAGATAAACTTTGATAAAAAATTGTTCTATGAATTCTCAAATTTCAATTAGTGATACTTATTTCGAAGGTAATTATGCCTGATTGAATCTTCAATATCAACAAAATGAAAATTTTAGTATGATTGTTAACTCATACACCTCTAATTAAAGGTATTTTCTTTATCCCATGAAATGAAAATTTATTAAGAACTTAGAAAGCTACGGTATGCCTTTGATGCAAAAGAAAGATTCATTTTCATTAAATCATGTTTAAAAAAAAGAGCAAAGAGCAAAAGGTGATGAAAGTTTTT
マーカー_25462(配列番号103);C→T
TTCTATACGAAATATTTGTCTGCCATAAATCTACTCAGGAACTCGATACATCAAAACATAAGTACGCTTGCTCTTTATTTTTCGTTTGAAAAATAAATAGATCATTTTCGCACTTACATTTCAATTTCAATTGCTTTATTCATATCTTTCTGTTTTTACTTACTGGTATTTAACAGTCGTTGTTCACAATTTAATGATCTATGAAACACCATTTAATTGTATTTGGACTAACTTTTCGACAAGCAAAAGATTAAAATTGTCTTCAGATACAGTTATAAATTTACATTGAAGATAAATGAA
マーカー_33494(配列番号104);A→C
TAACGATCTGTATATCAATGGAATAATATTCAGTTCATGTTGTACTCGATATGAGATAGAATTACAATTTTGGAACAAGATAATCTCAACAGCTATTTTCAAGAATAGTTAAATTAGGATACCATTCAAAGAAACTTTAAAAAATGATTTCCATACATTAATGCTTTTTGTGTTTTCGCTCTCGACCAGAATCCAGGAATTGTCCATTATCATCAATTTGATTAACTTTTATCTTTATTCTAATTCTTCAACATTTCTCTAATTGATATTAGTTTCAATATTTTAATAAGTAAAAATTTA
マーカー_17935(配列番号105);T→C
ATAATGTGTTATTGATCAAAGGATTTTTAGTTACCTACCAGATGGAAAAAAAGCAAGTTTACGAAAACAGAAGTTAGCATCAACTTTCATCCATGGTTACACCGTATATAATCCAATCGACTCATACTTTATGTTGATCTGATTTTATAGCAGATAACTAGTTACCTTGCTCAGCAGCAGCTAAATCCTTTCTATTTGCTTAATAACAGAAATATTTTTCATTAACAAAGAAATTATACTCCGTGTTTGACATTTCATTTTAATTTCGTTCCAAAAATGAAAAAAGCTTCGTCCGGAAAT
マーカー_48561(配列番号106);C→T
ATTATTTTGTAGTTTTTCATTTTTTAGTTCAATTTTCCTTTGCTTATTTTAAATATGCCATTCTTTATTCAGACTCATAGCGAATGCATATGTTCATTAATTTTTTTAGTTACAGTTACAAATTCTCAATTTCTCTTTAATCATTTTTTTTTCCAAAAATAGTCTGAGCACTCAACCATTCATTCAACAATTGCAGCTTTTTTTATTGGAGCCTTGTCAAATTATCAATTCGTTTCCATGTTTATTATTGAAATAATAAACGGTATTTAGGATAACGAAGTTCGCTTAGCTTCTTTGACT
マーカー_42003(配列番号107);T→G
AAAAATTCAGGTAATGAGATCAGTAATTTTTTTTGGTCACTTTGCTGTTTCTTATCAGCTCATTGTTATCCATATCAAATGAGCGAAAGTGTGTATCACATATTGGCAGAGTGTAATCTATGAAGATTTTGCGTATCAAAGTAATTATGAGAGAACTGATAATTTTATTTTAAAGTAGTAGAAAACTCGAATTAAGCTAATAAATAATCGGTTGATATCCATGAAATGAATTACTAATGAAATGGATAATTGAGTAATAACAAATGATATTCATGAAGAAAGGCAGGTTTTTTTTAATAG
マーカー_29566(配列番号108);C→T
TATACTTAAAACAAGAAATACAATTAATGCCAATAGCAGAGTGAAACTTCTGAAAAATAATGAGTTGAAACTGGTAAAATTAACATTTTATTAGAAATTTCAGAAACTTATGACTCCTCATGGCACTATCACAAAATGTTTGAAAAAAATTGACAGCTCGCGTCGATTGCAAAAATCATGATTCCTGATATTTAGTATCGAACATGTGACAAATAATATAAAGACCTAACCATAAAGCACTGAAACAACTCGCGGAAACAAAAAATTAATTTGCATAAACACGGAATACGATCAGAAAAT
マーカー_33868(配列番号109);G→A
GAATTTTTTTAGAAGGCTTGAAGTCGAGAATATTAGAGACTATATCGAAGACTTAAATAATCCTGGTAATCTTCTGTATGAATCAAAATTACCTCGAACAGAACCATTCAGCACATCACGAGATAATTCATGGAATGAAACTAGCCAATCAGAGCGTTGTAAAAGAAGAAAGTTATGAAATGACCTTAAAATCAATTTAAAGCATGTCCTCGCCATATAAGCGTTGAAAAGTTAGGATAGAATCAATTATCAAAAAAATATGTTAACTAGATCTTATCAATCAAAACATCAGAAGGAAAA
ATATGATAATAGTGAAACAATTCCATCACAATAAATATTATCGATTAGGAGATAAATTAACATTGATGCCTCAATTTTGGTCAACAATATATATTTGCTATTAGCATTTTTATTAAATCGTTTTTATCTGACTTGACATAAATTGAAATAGAAAAAATTGAATCTGTTCCTTGTTAGATTTTCTTCTAAAAATTCTTGAAATACAAATAATTTCTTAAATTTCAATATTTCTACATAATGTATTGCGACAAAAATGCTAATGATTGGCTTATTATTATTTCGAATAATTTTTTAATCAAA
マーカー_26225(配列番号111);A→G
AGCTCGAAGATCGGACAAAATTTGTTCAGCTTGTTGCCTTGAGGCTTTAGTCTGAAAAGACACTTAAAAGTATAAACAAATTATATTCAAAAAATCTTATTTTGCATTTGCGTCTTAATTTTTGCTTTTTGCAAAGTTTTTTCCGAGCAAGTTTTTCTATCTTCGAAAAGATTATATCAATTAAAATTTCAATTTAAGCAATCATTGCCTCTTCGAGTTTCTGTTTCAGCAAATAAATATCACCACCACGACGCTGTCGGAAGAAAGAAACGCCTTTCCCAATTTCTCGTCTCAACTTTT
マーカー_47722_B(配列番号112);A→G
TAAGAAAGCTGGGAGATTTTCCAAAAACACTATTTCCCACGATTTGTTGTTTTCTATGATCAATTCTTAATCAAACTCTGAAATTCTCAAATTTTCGATTTCTATCCAACTTCTACATATTTTTTTAGAAAATTCATATTTAGCAAAGCTGAGTGTAGAAATAATTCATACTTGCAATTCATTTTTCTTAAATTTTCGAATTTCTTAAAAAAGTATTTCAAATTACCTACCAATTTTGATTGGAAAATTCGTGGATGCTAAAAATTCAAATCAAAATAGTTAAACAGTATTCCTAATTGT
マーカー_58162_B(配列番号113);T→C
AATTTAAAAAACACATCGACATTTTGCGGTACGGTAATGATTGTTTACAGTAACTAAATGTGTCCTACGGTAGTAATACTCGTGTACGTAATGAATGAGTATAGTGACCGGATATTTCCTTCACTAGTAGGCAATATTAAGAAGTATTTTCATTTTCATATTCTATCTAAAATAAACCGATAAAATGGTTTTTGAATTATTACTTTTTCATTGTTATTTTTTGATCCTAAATTGTAAAATACTGTAATAATTTAGCTAATTTCTATGATTCTATTCAATATGCTTAAATTAAAATTCTAA
マーカー_17709(配列番号114);T→C
TCGTATTTGTTGTATGTAATATAGAAATATTGTTTAAATTCAATATGTAGAAAAAATTTCTANNNNNNNNNNAATTAATTACATATTAACTCGTATTTGTTGTATGTAATATAGAAATATTGTTTAAATTCAATATGTAGAAAAAATTTCCATAATAAAGACGAACAGCATTTATAATTATCAATGATAAGTTGAAATTAATTCATCAATGATAAGTTGAAATTAATTTATTTGAAATAATTTCTTTGAAATTCGAATATAGACGAGAATTTTTTTTTTTTTGCTAATCGTTTATCAAAT
マーカー_47141(配列番号115);T→C
TCTAGCAATATAAATTACAAGAATATGCCGTCCAAGTATTTCAGAATTTATTATTAATTTGGATAATAATACATTGTAAATACTGCGTATTCTGGATTATTATGCACTGCATAATAACATGCAATTTCGTCTACATATCGCGAATAAACGCCAAAAGATTTCTCGATAAAAGAAAATATAAGAATTCGTAAATGAATGTTGTGTCAGAGATATGTGTTAATTCATAAGTCAAGATGTTGTAAATCGATCCATATTAGTAATCATATTTACGTGCTCGTAAATAAAAGCGGTGATTCTTGT
マーカー_48750_A(配列番号116);A→G
ATCGAAAAAAGATGATCTGATGACGGAAGGCGAAATGTCTGCAGAAGCTAAGATGACGGAAGAAAAAAGTGAAGAAATGAAAGAAGAAGCTGGTAAAACTCAGAAGGAATGTAAAACTGGAGAATCGAAAAAAGATGATCTGATGACGGAGGGCGAAATGTCTAAAGAAGCTAAGATGTCGGAAGAAAAAAGTGAAGAAATGAAAGAAGAAGCTGATAAAACTCAGAAGGAATGTAAAACGGAAGAATCGAAAAAAGACGATCTGACGACAGAAGGCGAAAAATCTGAAGTAGATGAGCC
マーカー_63962(配列番号117);A→G
ACTAATGATAAGAAACGGAGCCGACGATTTTAGGAAATGAATAATAACGACATTGACAACCATTGTTAGAAAATTGATAGTACTGATAATAAAAGCTAGTTATAGAAAATTGATAATAATAATAAAATTGCTGGTAGCAAATGTCTAGAAGTGATAATAAAATTAATGATAGCAAATGGATTAGCAATGATAATTAAACTGATGATAGCGAATGGATTAGTAATGATAATAAAATTGATGATAGCAAATGACTAATAATGGTAATAAAAGTTAATGCTAGTGATAACTTGTATTTTAAGT
マーカー_6372(配列番号118);A→G
ACAGTTTATAGTTACAATATTCTCCGGTGACTAACTGTATTTTACAACTTATAATTATAGATTACAAAATATATTATAGTAGTTTTATAATTACAGTATTCTTAAGTGAATAACTATACTTTACAGCTTACAGTTACAGTAGTTTTCTATGTTTTTGAATATTAATTTTACATGGTTTTTCCTAGTTTCAGTTTCAAAATTTTCAGATATTTTATGTGTTAAAGCAAATTATATTCGAGATATAAAAAGTACTGGTCATATCTTACAATTCTCATCCTTCTATATTGGAAAGAATTGAGT
マーカー_15611(配列番号119);T→C
GTATTGGGACCGCGTATCGGGAAATCTGAAAGAAGTCTTTAACAGTATTTTAAATGAATAATTCAAATCGTTACTTCTTAATATATTAATTTATGCGTATATATGCAGTACATAGCATTGCTTAAATTCTTATTTTTCCGCGGTTAAAACCCTATGTAAGATAAGGGAGGTGATTGTATCTGCGCCGTACTCCTTGTTTTAATCTACCTGCTTGTTGTATATCCTCCACATATTGTAACTGCAGCTTCACATTTGCATATATAGTAAGGGCATCGTTGTCTCCAGAAGAGATATATTATC
マーカー_46432(配列番号120);T→A
GCTGCCCGAATGTTACAATTAGGACGAAAGTAAAAGTAGTTGACTGTAGGTATGACGATAAAGGAAAAATTTGTATCTTAAGACTTTACAATTTCTAAATATTACGTGTTTTATCGTGCTAACATCACGAATTCCATATTCACAAAAAAAATTTTGTAGAACTCCATCTGGTTTGGATGAATTTGCTACAGTTGAACTGGATGATGGAACGAAATTGCAAACATCTCTTATTGTTAGTATTTTCTAAATTCTGTGAAATTTTGCAACGGCATTCATGTTTAATTATTAATTTGGAGAAAG
マーカー_29594(配列番号121);T→A
AAATAAGCAAATCCGAAAGTATTACATATACGGACTAAATATTGCCATTCATTCGGGAGTATACCATTGCAACCATTGGTATTTCATTTGATCGAGAAAACTAGTTTTTGTAGTTTGGGATAAAGAGAAATGGAGAGAGGAACTTTCATGATCAATTTCTTTACGTACTGAAATTCATTTCTATGGATGTTCTTTTTCTATTTCATTCTCCTCAGCAAATACAGTCCGAACAGTCATCAAATAAGTCTAAAAGGCATGAATAATATAAACATCAGCAACTTTTTAAATGAATGCTTATTA
マーカー_26784(配列番号122);G→C
ATTTCTATAAACATCTCTTGCATTGATTAATTTAACATGTTGCAATAAATATTTCTTACTTTTGAATGTATCATTTACTAGAAAAAACTTCAATCGAGGAAATAAGTTTTAAAATAAATTCATATTTGAATTCATGTCAGTTCAAAAATTCTATTACTATAATACATGTCTCTTGGTTGTATCTTTTTTTCTTTTGAAATAATACAATCAAACGGTTTCCTAAATTTTCATAGACATCATATTTTAAAAAAAAATGCATTTGAAAATTTTCGAAAATCAATGAACTTAATTGATGAAAAA
マーカー_51661(配列番号123);C→G
GCATGTGTATGTAGTATTTCTTTGTAAACAACATATCTAATCTGTCTGTCCCTTTAACATTATAGAATAGTCAGTTAGTCCGCTATTTATTTTAATAACAAAATATCTCACTTAACTTCCATTTCTTTCCTAAATAATTTTGTTTCGCTAGATCTTTCCTATAATTTTCAAATTTTCAAAAATGAATTAATCTTTTATTTATATATGTGTATGTATGTGTATGTATGTATGTGTACGTTGCATATATGTATATGTATGTGTGTATGTGTGTATATGTATATGTATATGTGTGTATGTGTG
マーカー_7819(配列番号124);G→C
TATGCATAATGTGCGACCAGCCAATAATGTCTTCAAACCATAATTATGCAGAAATAAATTTTTTCCAGAAATAATTTTTTTTTTTTTACATATACTTCCGATCTGTGAGAAAATACATTTGAAGTGAAGTGTGAAGCAATGCTACTTTTTCAAACAACATTGTGAAAATGGATTAAAACGCACCAATGGAGCAAGAGATCGTAAGTTTCGTTCCGCATGTCCTGTGGCAACGTGTAAACCATCCGTTAACGATATATGATGTAAAAGCCGACACACCCAAATTAAAATCCATTATAAACA
マーカー_26704(配列番号125);G→C
AAATGGATCGTATTCACTTCGTAAGAACTTAGTGAACGAAAAATCAAACCATCACAATAACTTTACTTTTTTTCTTTTTTTACTAAACACACTATCCTATGAAAACAAAATGTCCAAATAGATTCATATGATAATGAACTGTGAAGTTATCCAATCTATCAGTTCTCGAAGAGGGAATAAATAAAAACATTAAGCAACCCACCGATCTTCGCTGACCATCTCCTTCTTCATTAGCAAGAAGCAAATCTTGTGGTGATATTTCTGCAACCATCTGCAAAATAAAGCACGAAAAATTAAGGA
マーカー_14329(配列番号126);C→A
TTTGATATGCAATCAACTAACCAAATCAGAATTCAATGCATTCTGATAAATTTCTTCAATATCGTGCATCAATTCGACATCATATTTTGACAGTGATGCTACCTTTTTAGCCGTATTTCGGAAAAATATGAATTCAACCAGCTGCGTCCCAAAATTTAAGGCTGTAGCAAGTCCAGCAACAACCAGCCCTACAACTGAAAATTCTAAAAACTGGTTCACGTGCTTATCATTAATAATTTCAACACTATCACTATCTCCACATGAACTTGATCGATTATAATTTAGTAGAACTGAAAAAAA
マーカー_56169(配列番号127);T→G
ACAAATTCGTTTTAATATTGGATTACATTGAAATTGCTGAAATAAAGTGGAAATATTGAAAAGCATTTTACAATATTTGTTAACAACATTATATTTAAAGAATATACACCTTGGTTTAAATGGTAAAATAATCTCAAGAATTTTCATTAGGTTAATTTTTTTTTATTTATTTATATTCACAAAAAATTGTAAAAGAAAACAAAAACAACAATAATAACGGTGACAACAACAACAATAATAATAACAAAACTATTTGTTGTGATTTTGCAGCATTGATGTAGTGGGGATCTTTTGGAGCGA
本発明の実施形態では、本発明のプローブは、キットとして使用者に提供されてもよい。本発明のキットは、1つ以上の本発明のプローブを含んでもよい。例えば、キットは、本明細書に開示されるフラグメントのうちの1つにおけるSNP位置で線虫の遺伝子型を決定することができるプローブを備えてもよい。このキットはさらに、1つ以上の試薬、緩衝液、パッケージング材、このキットを用いるための説明書およびこのキットの構成要素を保持するための容器を備えてもよい。
本発明の方法およびこの方法を行うためのキットは、研究、医学および産業上の用途を有し得る。本発明は、感染した動物におけるイヌ糸状虫の管理において、およびある地域におけるML耐性線虫D.イミティスの検出において広範な用途を見出している。本発明の代表的な、非限定的な用途としては、予防法または治療法のためのMLの通常の用量に対して感受性でないD.イミティスの個体または集団の存在の検出、定量および/または診断などが挙げられる。一実施形態では、本発明の核酸分子を検出および定量する能力は、MLに対する応答性が低下した線虫D.イミティスに感染した動物用に化学療法レジメンを変更するように、開業獣医師に指示を与える限りにおいて有用である。ML耐性線虫D.イミティスの同定によって、治癒を達成するためおよび/または耐性株の広がりを最小限に抑えるために、代替的薬剤(単数または複数)、例えば、成虫駆除剤(例えば、ヒ素ベースの薬剤)、ジエチルカルバマジン、テトラサイクリンなどの抗生物質、およびこれらのうちの1つ以上の組合せなどを含み得る療法へML療法単独から切り換えるように、獣医師に指示が与えられ得る。代替的に、獣医師は、ML耐性線虫に感染した動物の治療において、MLの、および/またはMLを用いる治療レジメンの、用量を調整してもよい。ML予防薬のための典型的な推奨される用量の割合としては、例えば、イベルメクチンについて6μg/kg;ミルベマイシンオキシムについて500mg/kg;モキシデクチンについて3μg/kg(月1回);およびセラメクチンについて6mg/kgが挙げられる。獣医師は、線虫ディロフィラリア属種例えば、ML耐性線虫D.イミティスに感染した動物を治療するのに適切な任意の組合せで上記の治療法および療法のうちの1つ以上を組み合わせてもよい。例えば、獣医師は、こうした動物をヒ素ベースの薬剤などの成虫駆除剤で治療し、次いで、MLまたはジエチルカルバマジンなどのミクロフィラリア駆除剤を続けてもよい。
これらの研究で用いられるD.イミティスの種々の感受性およびLOEの集団を下に記載する。
個々の成虫のゲノムDNAを、Qiagen(Qiagen Inc、カナダ、ミシサガ)のDNeasy(商標)キットで抽出した。個々のmfのゲノムDNA抽出は、QiagenからのQIAamp(登録商標)DNA Microキットを用いて抽出した。解析に十分なDNAを得るために、mfのDNAを、極めて少量のDNAから全ゲノムを増幅することを可能にする、QiagenのRepli−g(登録商標)キットを用いて増幅した。mfは、新鮮に採取した血液からポリカーボネート膜フィルターを通した濾過によって単離した。
この目標は、感受性のイヌ糸状虫集団には存在せず、LOEのイヌ糸状虫集団中に存在する遺伝的変化(例えば、ヌクレオチドのバリエーション)を特定することであった。任意のLOE集団におけるヌクレオチドのバリエーションは、感受性の単離体から得られた参照ゲノムと比較して、陽性のSNPマーカーを示す。
実施例1に記載されるようなLOEサンプルは、MLによるイヌの処置の履歴およびイヌ糸状虫生物の持続した存在のせいで、MLに耐性であると推定された。しかし、処置の履歴にかかわらず、寄生生物の真のML耐性に対する代わりの説明は、ML処置の飼い主のノンコンプライアンスである。従って、制御されたML処置条件下で研究を行って、イヌでのイヌ糸状虫生物の存在について潜在的な理由として、ML処置における飼い主のノンコンプライアンスの可能性を排除した。
Claims (11)
- 線虫の核酸分子を、配列番号118の15〜300ヌクレオチド長の配列またはその逆相補体を有する少なくとも一つのオリゴヌクレオチドと接触させることを含む、線虫ディロフィラリア・イミティス(Dirofilaria immitis)の遺伝子型を決定するための方法であって、前記少なくとも一つのオリゴヌクレオチドが、配列番号118の位置151に、多型性部位を含む、方法。
- 前記少なくとも一つのオリゴヌクレオチドが、配列番号118の15〜100ヌクレオチド長の配列またはその逆相補体を有し、かつ前記多型性部位を含む、請求項1に記載の方法。
- 前記少なくとも一つのオリゴヌクレオチドが、配列番号118の15〜50ヌクレオチド長の配列またはその逆相補体を有し、かつ前記多型性部位を含む、請求項1に記載の方法。
- 前記多型性部位での代替的ヌクレオチドの存在によって、前記線虫が、イベルメクチン、セラメクチン、ミルベマイシンオキシム、またはモキシデクチンから選択される大環状ラクトンに耐性である可能性が高いことが示される、請求項1〜3のいずれか1項に記載の方法。
- 線虫から核酸分子を単離する工程を、線虫の遺伝子型を決定する工程の前に含む、請求項1〜4のいずれか1項に記載の方法。
- 前記線虫の遺伝子型が、DNAシークエンシング、対立遺伝子特異的なオリゴヌクレオチドによるものを含むハイブリダイゼーションベースの方法、マイクロアレイ解析、酵素ベースの方法、一本鎖高次構造多型(SSCP)、高解像度融解(HRM)、またはPCR、RT−PCR、もしくはqRT−PCRに基づくアプローチによって決定される、請求項1〜5のいずれか1項に記載の方法。
- 線虫ディロフィラリア・イミティスの遺伝子型を決定するためのキットであって:
配列番号118の位置151の多型性部位で線虫の遺伝子型を決定できる少なくとも第一のオリゴヌクレオチド、
を備える、キット。 - 前記オリゴヌクレオチドが、プローブ、プライマーまたはアプタマーである、請求項7に記載のキット。
- 前記線虫の遺伝子型が、DNAシークエンシング、対立遺伝子特異的なオリゴヌクレオチドによるものを含むハイブリダイゼーションベースの方法、マイクロアレイ解析、酵素ベースの方法、一本鎖高次構造多型(SSCP)、高解像度融解(HRM)、またはPCR、RT−PCR、もしくはqRT−PCRに基づくアプローチによって決定される、請求項7または8に記載のキット。
- さらに、配列番号1〜113、115〜117、または119〜127の多型性部位で線虫の遺伝子型を決定できる少なくとも第二のオリゴヌクレオチド、
を備える、請求項7から9のいずれか1項に記載のキット。 - さらに、線虫の核酸分子を、配列番号1〜113、115〜117、または119〜127の15〜300ヌクレオチド長の配列またはその逆相補体を有する少なくとも第二のオリゴヌクレオチドと接触させることを含み、前記少なくとも第二のオリゴヌクレオチドが多型性部位を含む、請求項1〜6のいずれか1項に記載の方法。
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JP7233495B2 (ja) | 2023-03-06 |
JP2016523103A (ja) | 2016-08-08 |
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US20180187264A1 (en) | 2018-07-05 |
WO2014210097A2 (en) | 2014-12-31 |
US20160153042A1 (en) | 2016-06-02 |
JP2019110908A (ja) | 2019-07-11 |
JP2021192619A (ja) | 2021-12-23 |
CA2913596C (en) | 2021-05-04 |
ES2829619T3 (es) | 2021-06-01 |
DK3431613T3 (da) | 2020-11-02 |
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