JP5091122B2 - 統計的線形データの同定 - Google Patents

統計的線形データの同定 Download PDF

Info

Publication number
JP5091122B2
JP5091122B2 JP2008511434A JP2008511434A JP5091122B2 JP 5091122 B2 JP5091122 B2 JP 5091122B2 JP 2008511434 A JP2008511434 A JP 2008511434A JP 2008511434 A JP2008511434 A JP 2008511434A JP 5091122 B2 JP5091122 B2 JP 5091122B2
Authority
JP
Japan
Prior art keywords
data
data points
original
smoothed
residual
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
JP2008511434A
Other languages
English (en)
Japanese (ja)
Other versions
JP2008546048A5 (enExample
JP2008546048A (ja
Inventor
ラーナー，ジェフリー
Original Assignee
バイオ−ラッド ラボラトリーズ，インコーポレイティド
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US11/432,856 external-priority patent/US7647187B2/en
Application filed by バイオ−ラッド ラボラトリーズ，インコーポレイティド filed Critical バイオ−ラッド ラボラトリーズ，インコーポレイティド
Publication of JP2008546048A publication Critical patent/JP2008546048A/ja
Publication of JP2008546048A5 publication Critical patent/JP2008546048A5/ja
Application granted granted Critical
Publication of JP5091122B2 publication Critical patent/JP5091122B2/ja
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00—Pattern recognition
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6851—Quantitative amplification
    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F2218/00—Aspects of pattern recognition specially adapted for signal processing
    • G06F2218/08—Feature extraction
    • G06F2218/10—Feature extraction by analysing the shape of a waveform, e.g. extracting parameters relating to peaks

Landscapes

  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Data Mining & Analysis (AREA)
  • Evolutionary Biology (AREA)
  • Evolutionary Computation (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Artificial Intelligence (AREA)
  • Complex Calculations (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measurement And Recording Of Electrical Phenomena And Electrical Characteristics Of The Living Body (AREA)
  • Measuring Pulse, Heart Rate, Blood Pressure Or Blood Flow (AREA)
  • Radar Systems Or Details Thereof (AREA)
JP2008511434A 2005-05-13 2006-05-12 統計的線形データの同定 Expired - Fee Related JP5091122B2 (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US68118205P 2005-05-13 2005-05-13
US60/681,182 2005-05-13
US11/432,856 2006-05-11
US11/432,856 US7647187B2 (en) 2005-05-13 2006-05-11 Identifying statistically linear data
PCT/US2006/018549 WO2006124673A2 (en) 2005-05-13 2006-05-12 Identifying statistically linear data

Publications (3)

Publication Number Publication Date
JP2008546048A JP2008546048A (ja) 2008-12-18
JP2008546048A5 JP2008546048A5 (enExample) 2009-07-02
JP5091122B2 true JP5091122B2 (ja) 2012-12-05

Family

ID=37431939

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2008511434A Expired - Fee Related JP5091122B2 (ja) 2005-05-13 2006-05-12 統計的線形データの同定

Country Status (6)

Country Link
EP (1) EP1880334A4 (enExample)
JP (1) JP5091122B2 (enExample)
CN (1) CN101292245B (enExample)
AU (1) AU2006247597B2 (enExample)
CA (1) CA2603389C (enExample)
WO (1) WO2006124673A2 (enExample)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20090119020A1 (en) * 2007-09-25 2009-05-07 Roche Molecular Systems, Inc. Pcr elbow determination using quadratic test for curvature analysis of a double sigmoid
JPWO2009054474A1 (ja) * 2007-10-26 2011-03-10 凸版印刷株式会社 アレル判定装置及び方法、ならびに、コンピュータプログラム
EP2326949A1 (en) * 2008-09-09 2011-06-01 Bio-Rad Laboratories, Inc. Multi-stage, regression-based pcr analysis system
US8219366B2 (en) * 2009-08-26 2012-07-10 Roche Molecular Sytems, Inc. Determination of elbow values for PCR for parabolic shaped curves
JP5379044B2 (ja) * 2010-02-25 2013-12-25 株式会社日立ハイテクノロジーズ 自動分析装置
US10176293B2 (en) 2012-10-02 2019-01-08 Roche Molecular Systems, Inc. Universal method to determine real-time PCR cycle threshold values
CN116027439A (zh) * 2022-11-28 2023-04-28 陕煤集团神木张家峁矿业有限公司 一种瞬变电磁法低信噪比观测数据标准差估计方法及系统

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2139070C (en) * 1994-12-23 2010-03-30 Burton W. Blais Method for enhancing detection ability of nucleic acid assays employing polymerase chain reaction
US6175602B1 (en) * 1998-05-27 2001-01-16 Telefonaktiebolaget Lm Ericsson (Publ) Signal noise reduction by spectral subtraction using linear convolution and casual filtering
US20020146723A1 (en) * 2000-10-25 2002-10-10 Krontiris Theodore G. Candidate region mismatch scanning for genotyping and mutation detection
US7228237B2 (en) * 2002-02-07 2007-06-05 Applera Corporation Automatic threshold setting and baseline determination for real-time PCR
US20050069904A1 (en) * 2003-09-29 2005-03-31 Stuart Peirson Analysis of real-time PCR data

Also Published As

Publication number Publication date
EP1880334A2 (en) 2008-01-23
WO2006124673A2 (en) 2006-11-23
WO2006124673A3 (en) 2008-04-17
AU2006247597B2 (en) 2010-02-11
EP1880334A4 (en) 2010-01-20
CN101292245A (zh) 2008-10-22
AU2006247597A1 (en) 2006-11-23
CA2603389A1 (en) 2006-11-23
JP2008546048A (ja) 2008-12-18
CN101292245B (zh) 2013-04-17
CA2603389C (en) 2012-07-10

Similar Documents

Publication Publication Date Title
JP6388627B2 (ja) 情報システムを用いて反応を解析する方法およびシステム
JP4610196B2 (ja) リアルタイムｐｃｒのための自動閾値設定およびベースライン決定
US8560247B2 (en) Multi-stage, regression-based PCR analysis system
US7720611B2 (en) Baselining amplification data
JP5599986B2 (ja) リアルタイムｐｃｒ蛍光データ内のステップ型不連続部除去用のシステム及び方法
JP5558762B2 (ja) 方程式のないアルゴリズムによるリアルタイムｐｃｒエルボーの呼び出し
JP4634365B2 (ja) ダブルシグモイドの曲率分析を使用したｐｃｒのエルボー決定
JP6907388B2 (ja) 核酸増幅反応を分析するための分析方法およびシステム
CN105849736B (zh) 用于检测和校正实时pcr信号中的跳跃的方法和系统
JP5091122B2 (ja) 統計的線形データの同定
EP2419846B1 (en) Methods for nucleic acid quantification
US7647187B2 (en) Identifying statistically linear data
US11232851B2 (en) System and method for modeling and subtracting background signals from a melt curve
JP4690513B2 (ja) 核酸アッセイの読取り値を分析するためのコンピュータ化した方法とその装置
KR20140002242A (ko) 실시간 ｐｃｒ을 이용하여 핵산의 정량 분석을 수행하는 방법 및 장치
JP2011523453A (ja) 測定信号の相対ノイズ
JP5313663B2 (ja) 増幅データのベースライン化
AU2005300646B2 (en) A method, an installation, and a computer program for estimating the initial size of a population of nucleic acids, in particular by PCR

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20090317

A621 Written request for application examination

Free format text: JAPANESE INTERMEDIATE CODE: A621

Effective date: 20090317

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20090514

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20120124

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20120423

A602 Written permission of extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A602

Effective date: 20120501

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20120718

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20120814

A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20120913

FPAY Renewal fee payment (event date is renewal date of database)

Free format text: PAYMENT UNTIL: 20150921

Year of fee payment: 3

R150 Certificate of patent or registration of utility model

Free format text: JAPANESE INTERMEDIATE CODE: R150

Ref document number: 5091122

Country of ref document: JP

Free format text: JAPANESE INTERMEDIATE CODE: R150

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

LAPS Cancellation because of no payment of annual fees