JP2019528697A5 - - Google Patents
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- JP2019528697A5 JP2019528697A5 JP2019511497A JP2019511497A JP2019528697A5 JP 2019528697 A5 JP2019528697 A5 JP 2019528697A5 JP 2019511497 A JP2019511497 A JP 2019511497A JP 2019511497 A JP2019511497 A JP 2019511497A JP 2019528697 A5 JP2019528697 A5 JP 2019528697A5
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- Prior art keywords
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- classification
- tissue sample
- sample
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- 238000000034 method Methods 0.000 claims 23
- 201000009794 Idiopathic Pulmonary Fibrosis Diseases 0.000 claims 16
- 208000036971 interstitial lung disease 2 Diseases 0.000 claims 16
- 230000014509 gene expression Effects 0.000 claims 12
- 210000001519 tissue Anatomy 0.000 claims 8
- 238000010801 machine learning Methods 0.000 claims 4
- 206010006448 Bronchiolitis Diseases 0.000 claims 2
- 206010067472 Organising pneumonia Diseases 0.000 claims 2
- 238000003556 assay Methods 0.000 claims 2
- 201000009805 cryptogenic organizing pneumonia Diseases 0.000 claims 2
- 238000001514 detection method Methods 0.000 claims 2
- 201000001155 extrinsic allergic alveolitis Diseases 0.000 claims 2
- 208000022098 hypersensitivity pneumonitis Diseases 0.000 claims 2
- 201000004071 non-specific interstitial pneumonia Diseases 0.000 claims 2
- 230000000241 respiratory effect Effects 0.000 claims 2
- 230000000391 smoking effect Effects 0.000 claims 2
- 230000008236 biological pathway Effects 0.000 claims 1
- 238000001574 biopsy Methods 0.000 claims 1
- 230000001680 brushing effect Effects 0.000 claims 1
- 230000000694 effects Effects 0.000 claims 1
- 210000000981 epithelium Anatomy 0.000 claims 1
- 230000004927 fusion Effects 0.000 claims 1
- 230000035772 mutation Effects 0.000 claims 1
- 238000011176 pooling Methods 0.000 claims 1
- 108090000623 proteins and genes Proteins 0.000 claims 1
- 201000003651 pulmonary sarcoidosis Diseases 0.000 claims 1
- 230000035945 sensitivity Effects 0.000 claims 1
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2022082508A JP7394169B2 (ja) | 2016-09-07 | 2022-05-19 | 通常型間質性肺炎を検出するための方法及びシステム |
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201662384609P | 2016-09-07 | 2016-09-07 | |
| US62/384,609 | 2016-09-07 | ||
| US201762528899P | 2017-07-05 | 2017-07-05 | |
| US62/528,899 | 2017-07-05 | ||
| PCT/US2017/050358 WO2018048960A1 (en) | 2016-09-07 | 2017-09-06 | Methods and systems for detecting usual interstitial pneumonia |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2022082508A Division JP7394169B2 (ja) | 2016-09-07 | 2022-05-19 | 通常型間質性肺炎を検出するための方法及びシステム |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| JP2019528697A JP2019528697A (ja) | 2019-10-17 |
| JP2019528697A5 true JP2019528697A5 (enExample) | 2020-11-12 |
Family
ID=61562790
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2019511497A Pending JP2019528697A (ja) | 2016-09-07 | 2017-09-06 | 通常型間質性肺炎を検出するための方法及びシステム |
| JP2022082508A Active JP7394169B2 (ja) | 2016-09-07 | 2022-05-19 | 通常型間質性肺炎を検出するための方法及びシステム |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2022082508A Active JP7394169B2 (ja) | 2016-09-07 | 2022-05-19 | 通常型間質性肺炎を検出するための方法及びシステム |
Country Status (7)
| Country | Link |
|---|---|
| US (2) | US20190330680A1 (enExample) |
| EP (2) | EP4424840A1 (enExample) |
| JP (2) | JP2019528697A (enExample) |
| CN (1) | CN109689892A (enExample) |
| AU (1) | AU2017324949B2 (enExample) |
| CA (1) | CA3033241A1 (enExample) |
| WO (1) | WO2018048960A1 (enExample) |
Families Citing this family (20)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP2360278A1 (en) | 2005-04-14 | 2011-08-24 | Trustees Of Boston University | Diagnostic for lung disorders using class prediction |
| EP1999472A2 (en) | 2006-03-09 | 2008-12-10 | The Trustees Of Boston University | Diagnostic and prognostic methods for lung disorders using gene expression profiles from nose epithelial cells |
| AU2008302076B2 (en) | 2007-09-19 | 2015-06-11 | The Trustees Of Boston University | Identification of novel pathways for drug development for lung disease |
| US10236078B2 (en) | 2008-11-17 | 2019-03-19 | Veracyte, Inc. | Methods for processing or analyzing a sample of thyroid tissue |
| US8669057B2 (en) | 2009-05-07 | 2014-03-11 | Veracyte, Inc. | Methods and compositions for diagnosis of thyroid conditions |
| WO2014186036A1 (en) | 2013-03-14 | 2014-11-20 | Allegro Diagnostics Corp. | Methods for evaluating copd status |
| US11976329B2 (en) | 2013-03-15 | 2024-05-07 | Veracyte, Inc. | Methods and systems for detecting usual interstitial pneumonia |
| US12297505B2 (en) | 2014-07-14 | 2025-05-13 | Veracyte, Inc. | Algorithms for disease diagnostics |
| CN114606309A (zh) | 2014-11-05 | 2022-06-10 | 威拉赛特公司 | 使用机器学习和高维转录数据的诊断系统和方法 |
| EP4180531A3 (en) | 2016-05-12 | 2023-08-23 | Trustees of Boston University | Nasal epithelium gene expression signature and classifier for the prediction of lung cancer |
| WO2018009915A1 (en) | 2016-07-08 | 2018-01-11 | Trustees Of Boston University | Gene expression-based biomarker for the detection and monitoring of bronchial premalignant lesions |
| US20220015714A1 (en) * | 2018-11-29 | 2022-01-20 | Somalogic, Inc. | Methods For Determining Disease Risk Combining Downsampling of Class-Imbalanced Sets With Survival Analysis |
| GB2596233B (en) * | 2018-12-20 | 2023-10-11 | Veracyte Inc | Methods and systems for detecting genetic fusions to identify a lung disorder |
| WO2020176620A1 (en) * | 2019-02-26 | 2020-09-03 | Tempus | Systems and methods for using sequencing data for pathogen detection |
| EP4567125A3 (en) | 2019-07-03 | 2025-09-17 | BostonGene Corporation | Systems and methods for sample preparation, sample sequencing, and sequencing data bias correction and quality control |
| CA3155044A1 (en) * | 2019-10-16 | 2021-04-22 | Icahn School Of Medicine At Mount Sinai | Systems and methods for detecting a disease condition |
| WO2021228342A2 (en) * | 2020-05-12 | 2021-11-18 | Synaptic Aps | An individualized group testing method for medical test samples |
| US12093803B2 (en) * | 2020-07-01 | 2024-09-17 | International Business Machines Corporation | Downsampling genomic sequence data |
| EP4351723A4 (en) * | 2021-06-11 | 2025-04-16 | Acceleron Pharma, Inc. | ACTRII PROTEINS AND THEIR USES |
| WO2025117806A1 (en) * | 2023-11-30 | 2025-06-05 | Arizona Board Of Regents On Behalf Of Arizona State University | Volatile biomarkers for discriminating valley fever from other lung infections |
Family Cites Families (12)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5795782A (en) | 1995-03-17 | 1998-08-18 | President & Fellows Of Harvard College | Characterization of individual polymer molecules based on monomer-interface interactions |
| AU5631200A (en) | 1999-06-22 | 2001-01-09 | President And Fellows Of Harvard College | Control of solid state dimensional features |
| US7258838B2 (en) | 1999-06-22 | 2007-08-21 | President And Fellows Of Harvard College | Solid state molecular probe device |
| WO2006028508A2 (en) | 2004-03-23 | 2006-03-16 | President And Fellows Of Harvard College | Methods and apparatus for characterizing polynucleotides |
| JP4533015B2 (ja) | 2004-06-15 | 2010-08-25 | キヤノン株式会社 | 化合物及びそれを用いた有機エレクトロルミネッセンス素子 |
| CA2577079C (en) | 2004-08-13 | 2014-05-20 | President And Fellows Of Harvard College | An ultra high-throughput opti-nanopore dna readout platform |
| WO2011044142A1 (en) * | 2009-10-05 | 2011-04-14 | Duke University | Peripheral blood biomarkers for idiopathic interstitial pneumonia and methods of use |
| AU2012347263A1 (en) * | 2011-12-09 | 2014-07-24 | Mycartis N.V. | LTBP2 as a biomarker for lung injury |
| SG11201405830VA (en) * | 2012-03-27 | 2014-10-30 | Genentech Inc | Methods of prognosing, diagnosing and treating idiopathic pulmonary fibrosis |
| CN109504768A (zh) * | 2013-03-15 | 2019-03-22 | 威拉赛特公司 | 用于诊断肺病的生物标记物及其使用方法 |
| BR112015022490A2 (pt) * | 2013-03-15 | 2017-07-18 | Veracyte Inc | métodos e composições para classificação de amostras |
| CN114606309A (zh) * | 2014-11-05 | 2022-06-10 | 威拉赛特公司 | 使用机器学习和高维转录数据的诊断系统和方法 |
-
2017
- 2017-09-06 AU AU2017324949A patent/AU2017324949B2/en active Active
- 2017-09-06 CN CN201780055050.1A patent/CN109689892A/zh active Pending
- 2017-09-06 EP EP24166148.7A patent/EP4424840A1/en not_active Withdrawn
- 2017-09-06 EP EP17849490.2A patent/EP3510173A4/en not_active Withdrawn
- 2017-09-06 WO PCT/US2017/050358 patent/WO2018048960A1/en not_active Ceased
- 2017-09-06 JP JP2019511497A patent/JP2019528697A/ja active Pending
- 2017-09-06 CA CA3033241A patent/CA3033241A1/en active Pending
-
2019
- 2019-03-05 US US16/292,573 patent/US20190330680A1/en not_active Abandoned
-
2021
- 2021-03-30 US US17/218,123 patent/US20210355524A1/en not_active Abandoned
-
2022
- 2022-05-19 JP JP2022082508A patent/JP7394169B2/ja active Active
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