IL315002A - Engineered polymerases with reduced sequence-specific errors - Google Patents

Engineered polymerases with reduced sequence-specific errors

Info

Publication number
IL315002A
IL315002A IL315002A IL31500224A IL315002A IL 315002 A IL315002 A IL 315002A IL 315002 A IL315002 A IL 315002A IL 31500224 A IL31500224 A IL 31500224A IL 315002 A IL315002 A IL 315002A
Authority
IL
Israel
Prior art keywords
specific errors
reduced sequence
engineered polymerases
polymerases
engineered
Prior art date
Application number
IL315002A
Other languages
English (en)
Hebrew (he)
Original Assignee
Element Biosciences Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Element Biosciences Inc filed Critical Element Biosciences Inc
Publication of IL315002A publication Critical patent/IL315002A/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1241Nucleotidyltransferases (2.7.7)
    • C12N9/1252DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1241Nucleotidyltransferases (2.7.7)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/07Nucleotidyltransferases (2.7.7)
    • C12Y207/07007DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
IL315002A 2022-02-18 2023-02-17 Engineered polymerases with reduced sequence-specific errors IL315002A (en)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
US202263311939P 2022-02-18 2022-02-18
US202263343036P 2022-05-17 2022-05-17
US202363479490P 2023-01-11 2023-01-11
US18/160,951 US12006518B2 (en) 2022-02-18 2023-01-27 Engineered polymerases with reduced sequence-specific errors
US18/160,952 US12163163B2 (en) 2022-02-18 2023-01-27 Engineered polymerases with reduced sequence-specific errors
US18/160,947 US11788075B2 (en) 2022-02-18 2023-01-27 Engineered polymerases with reduced sequence-specific errors
PCT/US2023/062874 WO2023159219A2 (en) 2022-02-18 2023-02-17 Engineered polymerases with reduced sequence-specific errors

Publications (1)

Publication Number Publication Date
IL315002A true IL315002A (en) 2024-10-01

Family

ID=87573730

Family Applications (1)

Application Number Title Priority Date Filing Date
IL315002A IL315002A (en) 2022-02-18 2023-02-17 Engineered polymerases with reduced sequence-specific errors

Country Status (9)

Country Link
US (4) US11788075B2 (https=)
EP (1) EP4479528A4 (https=)
JP (1) JP2025506699A (https=)
KR (1) KR20240158392A (https=)
CN (1) CN119032166A (https=)
AU (1) AU2023221935A1 (https=)
CA (1) CA3244516A1 (https=)
IL (1) IL315002A (https=)
WO (1) WO2023159219A2 (https=)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10704094B1 (en) 2018-11-14 2020-07-07 Element Biosciences, Inc. Multipart reagents having increased avidity for polymerase binding
US12391929B2 (en) 2019-05-24 2025-08-19 Element Biosciences, Inc. Polymerase-nucleotide conjugates for sequencing by trapping
US12359193B2 (en) 2022-03-04 2025-07-15 Element Biosciences, Inc. Single-stranded splint strands and methods of use
US12371743B2 (en) 2022-03-04 2025-07-29 Element Biosciences, Inc. Double-stranded splint adaptors and methods of use
AU2022316142A1 (en) 2021-07-21 2024-02-22 Element Biosciences, Inc. Optical systems for nucleic acid sequencing and methods thereof
US12606819B2 (en) 2022-07-05 2026-04-21 Element Biosciences, Inc. PCR-free library preparation using double-stranded splint adaptors and methods of use
EP4573213A1 (en) 2022-08-15 2025-06-25 Element Biosciences, Inc. Spatially resolved surface capture of nucleic acids
AU2023343187A1 (en) 2022-09-12 2025-03-13 Element Biosciences, Inc. Double-stranded splint adaptors with universal long splint strands and methods of use
WO2025024465A1 (en) 2023-07-24 2025-01-30 Element Biosciences, Inc. On-support circularization and amplification for generating immobilized nucleic acid concatemer molecules
WO2025147667A1 (en) * 2024-01-05 2025-07-10 Element Biosciences, Inc. Target probe complexes and analyte detection complexes for in situ detecting and identifying target analytes
WO2025163526A1 (en) 2024-01-30 2025-08-07 Element Biosciences, Inc. Method for improving nucleic acid sequencing quality by eliminating nucleic acids with deaminated bases from library and method for sequencing in which complexes of primers, polymerases and labelled probes are bound to concatemers
WO2025240909A1 (en) 2024-05-17 2025-11-20 Element Biosciences, Inc. Hybridization-based capture and enrichment of target nucleic acid sequences
CN121065140B (zh) * 2025-11-06 2026-01-30 中国人民解放军军事科学院军事医学研究院 一种高保真dna聚合酶及其制备方法和应用

Family Cites Families (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE60027040T2 (de) * 1999-10-29 2006-11-23 Stratagene California, La Jolla Zusammensetzungen und methoden zur verwendung von dna polymerasen
US8268605B2 (en) 1999-10-29 2012-09-18 Agilent Technologies, Inc. Compositions and methods utilizing DNA polymerases
GB0321306D0 (en) 2003-09-11 2003-10-15 Solexa Ltd Modified polymerases for improved incorporation of nucleotide analogues
GB0507835D0 (en) 2005-04-18 2005-05-25 Solexa Ltd Method and device for nucleic acid sequencing using a planar wave guide
GB0804721D0 (en) 2008-03-14 2008-04-16 Genesys Ltd Enzyme
WO2009145828A2 (en) 2008-03-31 2009-12-03 Pacific Biosciences Of California, Inc. Two slow-step polymerase enzyme systems and methods
US20110045489A1 (en) 2008-04-22 2011-02-24 New England Biolabs, Inc. Polymerases for Incorporating Modified Nucleotides
EP2494073B1 (de) 2009-10-26 2017-11-29 AGCT GmbH Konjugate von nukleotiden und methoden zu deren anwendung
GB201007384D0 (en) 2010-04-30 2010-06-16 Medical Res Council Enzymes
US20130165350A1 (en) 2011-12-22 2013-06-27 Affymetrix, Inc. Surface linkers for array synthesis
US8906660B2 (en) 2012-02-01 2014-12-09 Pacific Biosciences Of California, Inc. Recombinant polymerases with increased phototolerance
WO2015166354A2 (en) * 2014-04-11 2015-11-05 King Abdullah University Of Science And Technology Dna polymerases from the red sea brine pool organisms
CN107002051A (zh) 2014-09-30 2017-08-01 亿明达股份有限公司 用于核苷酸类似物的改善的掺入的经修饰的聚合酶
WO2018148727A1 (en) 2017-02-13 2018-08-16 Qiagen Waltham Inc. Polymerase enzyme from 9°n
EP4234718A3 (en) 2018-04-26 2023-11-29 Pacific Biosciences Of California, Inc. Methods and compositions for stabilizing nucleic acid-nucleotide-polymerase complexes
EP3874036A1 (en) 2018-10-31 2021-09-08 Illumina, Inc. Polymerases, compositions, and methods of use
US10704094B1 (en) 2018-11-14 2020-07-07 Element Biosciences, Inc. Multipart reagents having increased avidity for polymerase binding
US10768173B1 (en) 2019-09-06 2020-09-08 Element Biosciences, Inc. Multivalent binding composition for nucleic acid analysis
WO2020117968A2 (en) 2018-12-05 2020-06-11 Illumina, Inc. Polymerases, compositions, and methods of use
US11512295B2 (en) 2019-09-12 2022-11-29 Singular Genomics Systems, Inc. Modified thermoccocus polymerases
US11287422B2 (en) 2019-09-23 2022-03-29 Element Biosciences, Inc. Multivalent binding composition for nucleic acid analysis
US11427855B1 (en) * 2021-06-17 2022-08-30 Element Biosciences, Inc. Compositions and methods for pairwise sequencing

Also Published As

Publication number Publication date
WO2023159219A3 (en) 2023-10-05
AU2023221935A1 (en) 2024-09-05
US20230265400A1 (en) 2023-08-24
US12163163B2 (en) 2024-12-10
WO2023159219A2 (en) 2023-08-24
KR20240158392A (ko) 2024-11-04
US20240287482A1 (en) 2024-08-29
US20230265402A1 (en) 2023-08-24
US11788075B2 (en) 2023-10-17
CA3244516A1 (en) 2023-08-24
US20230265401A1 (en) 2023-08-24
US12006518B2 (en) 2024-06-11
JP2025506699A (ja) 2025-03-13
EP4479528A2 (en) 2024-12-25
EP4479528A4 (en) 2026-04-08
CN119032166A (zh) 2024-11-26

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