EP3411692A4 - ULTRAVIOLET RADIATION EXTREME IN GENOMIC SEQUENCING AND OTHER APPLICATIONS - Google Patents

ULTRAVIOLET RADIATION EXTREME IN GENOMIC SEQUENCING AND OTHER APPLICATIONS Download PDF

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Publication number
EP3411692A4
EP3411692A4 EP17748097.7A EP17748097A EP3411692A4 EP 3411692 A4 EP3411692 A4 EP 3411692A4 EP 17748097 A EP17748097 A EP 17748097A EP 3411692 A4 EP3411692 A4 EP 3411692A4
Authority
EP
European Patent Office
Prior art keywords
applications
ultraviolet radiation
extreme ultraviolet
genomic sequencing
genomic
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
EP17748097.7A
Other languages
German (de)
English (en)
French (fr)
Other versions
EP3411692A1 (en
Inventor
Supriya JAISWAL
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Individual
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of EP3411692A1 publication Critical patent/EP3411692A1/en
Publication of EP3411692A4 publication Critical patent/EP3411692A4/en
Pending legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102—Mutagenizing nucleic acids
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/17—Systems in which incident light is modified in accordance with the properties of the material investigated
    • G01N21/25—Colour; Spectral properties, i.e. comparison of effect of material on the light at two or more different wavelengths or wavelength bands
    • G01N21/31—Investigating relative effect of material at wavelengths characteristic of specific elements or molecules, e.g. atomic absorption spectrometry
    • G01N21/33—Investigating relative effect of material at wavelengths characteristic of specific elements or molecules, e.g. atomic absorption spectrometry using ultraviolet light
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/17—Systems in which incident light is modified in accordance with the properties of the material investigated
    • G01N21/59—Transmissivity
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6818—Sequencing of polypeptides
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6893—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids related to diseases not provided for elsewhere
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/17—Systems in which incident light is modified in accordance with the properties of the material investigated
    • G01N21/25—Colour; Spectral properties, i.e. comparison of effect of material on the light at two or more different wavelengths or wavelength bands
    • G01N21/31—Investigating relative effect of material at wavelengths characteristic of specific elements or molecules, e.g. atomic absorption spectrometry
    • G01N21/33—Investigating relative effect of material at wavelengths characteristic of specific elements or molecules, e.g. atomic absorption spectrometry using ultraviolet light
    • G01N2021/335—Vacuum UV
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2223/00—Investigating materials by wave or particle radiation
    • G01N2223/60—Specific applications or type of materials
    • G01N2223/612—Specific applications or type of materials biological material
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N23/00—Investigating or analysing materials by the use of wave or particle radiation, e.g. X-rays or neutrons, not covered by groups G01N3/00 – G01N17/00, G01N21/00 or G01N22/00
    • G01N23/02—Investigating or analysing materials by the use of wave or particle radiation, e.g. X-rays or neutrons, not covered by groups G01N3/00 – G01N17/00, G01N21/00 or G01N22/00 by transmitting the radiation through the material
    • G01N23/06—Investigating or analysing materials by the use of wave or particle radiation, e.g. X-rays or neutrons, not covered by groups G01N3/00 – G01N17/00, G01N21/00 or G01N22/00 by transmitting the radiation through the material and measuring the absorption
    • G01N23/083—Investigating or analysing materials by the use of wave or particle radiation, e.g. X-rays or neutrons, not covered by groups G01N3/00 – G01N17/00, G01N21/00 or G01N22/00 by transmitting the radiation through the material and measuring the absorption the radiation being X-rays
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/483—Physical analysis of biological material
    • G01N33/487—Physical analysis of biological material of liquid biological material
    • H—ELECTRICITY
    • H05—ELECTRIC TECHNIQUES NOT OTHERWISE PROVIDED FOR
    • H05G—X-RAY TECHNIQUE
    • H05G2/00—Apparatus or processes specially adapted for producing X-rays, not involving X-ray tubes, e.g. involving generation of a plasma
    • H05G2/001—X-ray radiation generated from plasma

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biomedical Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Biotechnology (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Microbiology (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Cell Biology (AREA)
  • Medicinal Chemistry (AREA)
  • Food Science & Technology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Plant Pathology (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Toxicology (AREA)
  • Optics & Photonics (AREA)
  • Plasma & Fusion (AREA)
  • Analysing Materials By The Use Of Radiation (AREA)
  • Investigating Or Analysing Materials By Optical Means (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
EP17748097.7A 2016-02-01 2017-02-01 ULTRAVIOLET RADIATION EXTREME IN GENOMIC SEQUENCING AND OTHER APPLICATIONS Pending EP3411692A4 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201662289897P 2016-02-01 2016-02-01
PCT/US2017/016095 WO2017136476A1 (en) 2016-02-01 2017-02-01 Extreme ultraviolet radiation in genomic sequencing and other applications

Publications (2)

Publication Number Publication Date
EP3411692A1 EP3411692A1 (en) 2018-12-12
EP3411692A4 true EP3411692A4 (en) 2019-09-11

Family

ID=59387454

Family Applications (1)

Application Number Title Priority Date Filing Date
EP17748097.7A Pending EP3411692A4 (en) 2016-02-01 2017-02-01 ULTRAVIOLET RADIATION EXTREME IN GENOMIC SEQUENCING AND OTHER APPLICATIONS

Country Status (6)

Country Link
US (2) US10519495B2 (ja)
EP (1) EP3411692A4 (ja)
JP (2) JP2019506625A (ja)
KR (1) KR102561757B1 (ja)
CA (1) CA3012825C (ja)
WO (1) WO2017136476A1 (ja)

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20050211910A1 (en) * 2004-03-29 2005-09-29 Jmar Research, Inc. Morphology and Spectroscopy of Nanoscale Regions using X-Rays Generated by Laser Produced Plasma
WO2014062419A1 (en) * 2012-10-18 2014-04-24 Vuv Analytics, Inc. Vacuum ultraviolet absorption spectroscopy system and method

Family Cites Families (14)

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Publication number Priority date Publication date Assignee Title
US98102A (en) * 1869-12-21 Improvement in combined oyster-knife and ice-pick
US5107526A (en) * 1990-10-31 1992-04-21 The United State Of America As Represented By The Administrator Of The National Aeronautics And Space Administration Water window imaging x-ray microscope
GB9509410D0 (en) 1995-05-10 1995-07-05 Imperial College Molecular imaging
CA2201410A1 (en) * 1996-04-16 1997-10-16 Bogdan Kurtyka System for matching absorbance spectra employing a library stabilization algorithm
US6033079A (en) * 1999-03-15 2000-03-07 Hudyma; Russell High numerical aperture ring field projection system for extreme ultraviolet lithography
JP2005283929A (ja) * 2004-03-29 2005-10-13 Osamu Takai パターン形成方法及び装置
FR2893130B1 (fr) * 2005-11-08 2008-05-02 Thales Sa Dispositif d'imagerie pour biopuce, et biopuce associee
US8143600B2 (en) * 2008-02-18 2012-03-27 Visiongate, Inc. 3D imaging of live cells with ultraviolet radiation
JP2012021951A (ja) * 2010-07-16 2012-02-02 Saitama Medical Univ 軟ｘ線顕微鏡
KR102176709B1 (ko) 2012-01-19 2020-11-10 수프리야 자이스왈 리소그래피 및 다른 적용분야에서 극자외 방사선을 이용하는 재료, 성분 및 사용을 위한 방법
US9091930B2 (en) 2012-04-02 2015-07-28 Taiwan Semiconductor Manufacturing Company, Ltd. Enhanced EUV lithography system
CN103365073B (zh) * 2012-04-10 2015-07-01 中国科学院微电子研究所 极紫外光刻掩模缺陷检测系统
KR20180034453A (ko) 2015-06-30 2018-04-04 수프리야 자이스왈 극자외선 및 연질 x선 광학소자용의 코팅
US9583229B2 (en) * 2016-07-23 2017-02-28 Rising Star Pathway, a California Corporation X-ray laser microscopy system and method

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20050211910A1 (en) * 2004-03-29 2005-09-29 Jmar Research, Inc. Morphology and Spectroscopy of Nanoscale Regions using X-Rays Generated by Laser Produced Plasma
WO2014062419A1 (en) * 2012-10-18 2014-04-24 Vuv Analytics, Inc. Vacuum ultraviolet absorption spectroscopy system and method

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
ADE H ET AL: "Chemical contrast in X-ray microscopy and spatially resolved XANES spectroscopy of organic specimens", SCIENCE, AAAS, AMERICAN ASSOC. FOR THE ADVANCEMENT OF SCIENCE, US, vol. 258, 6 November 1992 (1992-11-06), pages 972 - 975, XP002430129, ISSN: 0036-8075, DOI: 10.1126/SCIENCE.1439809 *
CROSETTO: "Spatially resolved transcriptomics and beyond", NATURE REVIEW GENETICS, 1 January 2015 (2015-01-01), pages 57 - 66, XP055284555, Retrieved from the Internet <URL:http://www.nature.com/nrg/journal/v16/n1/pdf/nrg3832.pdf> [retrieved on 20160629], DOI: 10.1038/nrg3832 *
WEIJIE HUA ET AL: "Systematic Study of Soft X-ray Spectra of Poly(Dg)?Poly(Dc) and Poly(Da)?Poly(Dt) DNA Duplexes", JOURNAL OF PHYSICAL CHEMISTRY PART B, vol. 114, no. 20, 27 May 2010 (2010-05-27), US, pages 7016 - 7021, XP055404261, ISSN: 1520-6106, DOI: 10.1021/jp911199e *

Also Published As

Publication number Publication date
JP2019506625A (ja) 2019-03-07
JP2022119765A (ja) 2022-08-17
EP3411692A1 (en) 2018-12-12
US11718871B2 (en) 2023-08-08
CA3012825C (en) 2024-02-13
US20200140941A1 (en) 2020-05-07
CA3012825A1 (en) 2017-08-10
KR20190002420A (ko) 2019-01-08
US10519495B2 (en) 2019-12-31
WO2017136476A1 (en) 2017-08-10
KR102561757B1 (ko) 2023-07-31
US20170218440A1 (en) 2017-08-03

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