EP1594983A2 - Use of a novel polymorphism in the hsgk1 gene in the diagnosis of hypertonia and use of the sgk gene family in the diagnosis and therapy of the long qt syndrome - Google Patents

Use of a novel polymorphism in the hsgk1 gene in the diagnosis of hypertonia and use of the sgk gene family in the diagnosis and therapy of the long qt syndrome

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EP1594983A2
EP1594983A2 EP04708317A EP04708317A EP1594983A2 EP 1594983 A2 EP1594983 A2 EP 1594983A2 EP 04708317 A EP04708317 A EP 04708317A EP 04708317 A EP04708317 A EP 04708317A EP 1594983 A2 EP1594983 A2 EP 1594983A2
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gene
hsgkl
diagnosis
sgk
long
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French (fr)
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Florian Lang
Andreas Busjahn
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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/56Compounds containing cyclopenta[a]hydrophenanthrene ring systems; Derivatives thereof, e.g. steroids
    • A61K31/57Compounds containing cyclopenta[a]hydrophenanthrene ring systems; Derivatives thereof, e.g. steroids substituted in position 17 beta by a chain of two carbon atoms, e.g. pregnane or progesterone
    • A61K31/573Compounds containing cyclopenta[a]hydrophenanthrene ring systems; Derivatives thereof, e.g. steroids substituted in position 17 beta by a chain of two carbon atoms, e.g. pregnane or progesterone substituted in position 21, e.g. cortisone, dexamethasone, prednisone or aldosterone
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/56Compounds containing cyclopenta[a]hydrophenanthrene ring systems; Derivatives thereof, e.g. steroids
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/16Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • A61K38/17Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • A61K38/18Growth factors; Growth regulators
    • A61K38/1841Transforming growth factor [TGF]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P9/00Drugs for disorders of the cardiovascular system
    • A61P9/06Antiarrhythmics
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/573Immunoassay; Biospecific binding assay; Materials therefor for enzymes or isoenzymes
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6893Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids related to diseases not provided for elsewhere
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/90Enzymes; Proenzymes
    • G01N2333/91Transferases (2.)
    • G01N2333/912Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • G01N2333/91205Phosphotransferases in general
    • G01N2333/9121Phosphotransferases in general with an alcohol group as acceptor (2.7.1), e.g. general tyrosine, serine or threonine kinases

Definitions

  • the present invention relates to the use of a single-stranded or double-stranded nucleic acid containing a fragment of the hsgk for the diagnosis of hypertension, the said fragment being at least 10 nucleotides / base pairs long and the said fragment further comprising a polymorphism which results from the presence or Absence of an insertion of nucleotide G at position 732/733 in intron 2 of the hsgkl gene results.
  • the present invention further relates to the use of the direct correlation between the overexpression or the functional molecular modification of human homologs of the sgk family and the length of the Q / T time for the diagnosis of Long Q / T syndrome, and the use of the nucleic acid a human homologue of the sgk gene family or one of its fragments for the diagnosis of Long-Q / T syndrome.
  • polymorphisms of single nucleotides single nucleotides
  • single nucleotide polymorphisms SNP
  • the invention relates to the use of a functional activator or a transcription factor which increases the expression of the genes of the sgk family for the manufacture of a medicament for the therapy and / or prophylaxis of Long-Q / T syndrome.
  • the human version of the sgk was cloned from liver cells (Waldegger et al., 1997). It was shown that the expression of the hsgkl is influenced by the regulation of the cell volume. Such a dependence on the cell volume has so far not been demonstrated for the expression of the rat sgk. Furthermore, it was found that the rat kinase stimulates the epithelial Na + channel (ENaC) (Chen et al, 1999; Naray-Pejes-Toth et al, 1999). The ENaC in turn plays a crucial role in renal Na excretion. An increased activity of the ENaC leads to an increased renal retention of sodium ions, and in this way to the development of hypertension, as shown by WO02 / 074987 A2.
  • hsgk2 and hsgk3 Two other members of the human sgk gene family were cloned, the hsgk2 and hsgk3 (Kobayashi et al., 1999), both of which - like the hsgkl - are activated by Ins ⁇ lin and IGF1 via the PI3 kinase pathway. Electrophysiological experiments showed that coexpression of the hsgk2 and hsgk3 also resulted in a significant increase in the activity of the ENaC.
  • hsgkl is a considerable diagnostic tool in many diseases in which cell volume changes play a decisive pathophysiological role, such as, for example, hypernatremia, hyponatremia, diabetes mellitus, renal insufficiency, hypercatabolism, hepatic encephalopathy and microbial or viral infections Has potential.
  • hsgkl activates the endothelial Na + channel, which increases renal Na + absorption. Since this increased renal Na + absorption is associated with hypertension, it was assumed here that an increased expression of the hsgkl should lead to hypertension, a reduced expression of the hsgkl should ultimately lead to hypotension.
  • DE 100 421 37 also describes a similar relationship between the overexpression or overactivity of the human homologues hsgk2 and hsgk3 with the overactivation of the ENaC, the resulting increased renal Na absorption and the hypertension that develops from this. Furthermore, the diagnostic potential of the kinases hsgk2 and hsgk3 regarding arterial hypertension has already been discussed.
  • WO02 / 074987 A2 discloses the relationship between the occurrence of two different polymorphisms (single nucleotide polymorphism (SNP)) of individual nucleotides in the hsgkl gene with a genetic predisposition to hypertension.
  • SNP single nucleotide polymorphism
  • the object of the present invention is therefore to provide a further polymorphism in the hsgkl gene, the occurrence of which in one version or the other may correlate even better with the phenotypic occurrence of hypertension in the patient than the two known polymorphisms in exon 8 and intron 6.
  • the invention relates to the use of an isolated single- or double-stranded nucleic acid which contains a fragment of the nucleic acid sequence according to SEQ ID No. 1 or according to SEQ ID No. 2 comprises, for the diagnosis of hypertension, wherein said fragment is at least 10 nucleotides / base pairs, preferably at least 15 nucleotides / base pairs, in particular at least 20 nucleotides / base pairs long, and wherein said fragment has the polymorphism in intron 2 of the hsgkl gene either with or without the insertion of nucleotide G at position 732/733.
  • SEQ ID No. 1 describes the genomic DNA sequence of the hsgkl without the insertion of the nucleotide G (or GTP) at position 732/733 in intron 2 of the hsgkl gene, which describes the so-called “wild type (WT)” sequence and SEQ ID No. 2 the genomic DNA sequence of the hsgkl with the insertion of the nucleotide G (or GTP) at position 732/733 in intron 2 of the hsgkl gene, the so-called “insertion G (InsG)” sequence.
  • the present invention relates to a kit for diagnosing hypertension, comprising at least one isolated single- or double-stranded nucleic acid which contains a fragment of the sequence according to SEQ ID No. 1 or 2 includes.
  • the said fragment from SEQ ID No. 1 or 2 is at least 10 nucleotides / base pairs, preferably at least 15 nucleotides / base pairs, in particular at least 20 nucleotides / base pairs.
  • said fragment from SEQ ID No. 1 or 2 comprise the polymorphism in intron 2 of the hsgkl gene either with or without the insertion of nucleotide G at position 732/733.
  • the kit for the diagnosis of hypertension in addition to or instead of the single or double-stranded nucleic acid mentioned above — may also contain at least one antibody which is directed against such a region of the hsgk protein whose presence in the hsgkl protein is dependent on the presence of the insertion of nucleotide G at position 732/733 in intron 2 of the corresponding coding hsgk gene.
  • an antibody directed against precisely this spliced-out protein region could be used to detect the polymorphism version of the individual , With such an antibody, a predisposition to develop hypertension could therefore be diagnosed.
  • the invention in a third aspect, relates to a method for diagnosing hypertension, which comprises the following method steps: a) taking a body sample from an individual, b) optionally isolating and / or amplifying genomic DNA, cDNA or mRNA from the body sample according to a) , c) Quantification of alleles which have an insertion of nucleotide G at position 732/733 in intron 2 of the hsgkl gene.
  • a body sample is taken from a test individual, who is preferably a mammal, in particular a human.
  • a test individual who is preferably a mammal, in particular a human.
  • blood samples or also saliva samples are preferably used as body samples of the patient, which comprise cellular material and can be obtained by the patient with relatively little effort.
  • body samples that also include cells, such as tissue or cell samples, etc., can also be used.
  • step b either genomic DNA or cDNA or also mRNA is prepared from the body sample from a) using standard methods (Sambrook-J and Russell-DW (2001) Cold Spring Harbor, NY, CSHL Press) and / or optionally amplified. All suitable methods known to the person skilled in the art can be used here.
  • This DNA isolation step or DNA amplification step can optionally also be dispensed with, in particular if detection methods are used in step c) which themselves contain a PCR amplification step.
  • step c) the number of alleles is finally quantified which have an insertion of the nucleotide G at position 732/733 in intron 2 of the hsgkl gene.
  • Individuals who have two WT alleles are likely to be predisposed to training of hypertension.
  • the quantification / identification of the alleles with regard to the polymorphism at position 732/733 in intron 2 of the hsgkl gene can be carried out using various methods which are known to the person skilled in the art. Some preferred methods are explained in more detail below. However, the quantification of the number of alleles that have an insertion of nucleotide G at position 732/733 in intron 2 of the hsgkl gene is not limited to the preferred methods below.
  • the genotype (or the number of alleles) can be identified with respect to the polymorphism at position 732/733 by direct sequencing of the DNA, preferably the genomic DNA, from the body sample at said position 732/733 in intron 2 of the hsgkl gene ,
  • short oligonucleotides with sequences from the vicinity of position 732/733 of the hsgkl gene must be made available as sequencing primers according to known sequencing methods.
  • Another, likewise preferred method for identifying the genotype (or for quantifying the number of alleles) with regard to the polymorphism at position 732/733 are all known methods which are based on the hybridization of the genomic DNA from the body sample with specific hybridization probes.
  • An example of such a hybridization method is e.g. the southern blot. If, for example, the presence of the G insert at position 732/733 in intron 2 of the hsgkl gene destroys or also forms an interface for a restriction endonuclease, nucleic acid fragments with lengths that differ from the corresponding fragment lengths in the WT alleles differ. A specific genotype could thus be detected with regard to the polymorphism in question at position 732/733.
  • the genotype for the polymorphism in question at position 732/733 could also be determined with the help of a specific hybridization probe Splice variant missing exon can be detected.
  • Another example of a hybridization method is the hybridization of the genomic DNA from the body sample with a labeled, single-stranded oligonucleotide, preferably 15-25 nucleotides in length, which either has a G insertion at position 732/733 or does not have it. Under very specific hybridization conditions that can be tested experimentally for each individual oligonucleotide by known methods, a completely hybridizing oligonucleotide can then be distinguished from an oligonucleotide with a single base mismatch.
  • an oligonucleotide could be provided which contains the sequence of a fragment from SEQ ID No. 2 and at its 3 'end has the G at polymorphism position 732/733. If this oligonucleotide was hybridized with a sample fragment of the WT allele (without G insertion), this could not be extended and ultimately amplified in a subsequent PCR reaction due to the mismatch at the 3 'end.
  • a ligation assay is ultimately based on the same principle as the PCR oligonucleotide elongation assay: only those double-stranded nucleic acid fragments can be ligated to another double-stranded nucleic acid fragment that have an exact base pairing at the end.
  • the occurrence of a specific ligation product can therefore be made dependent on the presence or absence of the G insertion at position 732/733 in intron 2 of the hsgkl gene.
  • the Q, R and S waves that can be detected with the ECG measuring device represent measured values for assessing the spread of excitation.
  • the so-called Q / T time is defined as the time that elapses with the help of an EKG measuring device from the start of the spread of the T - Wave (the occurrence of the Q deflection) is to be detected until the end of the excitation propagation, which is characterized by the end of the T wave.
  • the Q / T time thus represents the time that passes between the beginning of a new state of excitation of the heart and the return to the resting state. A significantly longer Q / T time therefore leads to cardiac arrhythmias and ultimately to the Long Q / T syndrome mentioned above.
  • the invention therefore furthermore relates to the use of the direct correlation between the overexpression or the functional molecular modification of human homologs of the sgk family, in particular the hsgkl gene, and the length of the Q / T time for diagnosing the Long-QT syndrome.
  • a human homologue of the sgk family which comprises a functional molecular modification in the above sense, means a homologue of the sgk family which is mutated in such a way that the properties, in particular the catalytic properties or the substrate specificity of the corresponding protein can also be changed.
  • Equipment of the human homologues of the sgk family implies that individual mutations in the genes hsgkl, hsgk2 or hsgk3 could occur in individual patients, which alter the level of expression or the functional properties of the kinases hsgkl, Modify hsgk2 or hsgk3, and thus lead to a genetically caused extension of the Q / T time and ultimately to a predisposition to the development of Long Q / T syndrome.
  • Such mutations could occur, for example, in the regulatory gene regions or also in intron sequences of the sgk gene locus.
  • individual differences in the genetic makeup of the sgk locus could also affect the coding gene area.
  • Mutations in the coding region could then possibly lead to a functional change in the corresponding kinase, for example to modified catalytic properties of the kinase, which ultimately also influence the Q / T time. Accordingly, both types of mutation described above could cause an extension of the Q / T time and thus ultimately the predisposition to the development of the Long Q / T syndrome.
  • SNP single nucleotide polymorphisms
  • SNPs in the intron region or in regulatory sequences of the hsgk genes can, in their mutated version, possibly lead to a change in the expression level of the corresponding kinase.
  • SNPs in the intron region could also lead to a functional modification of the kinase if they influence the alternative splicing of the immature mRNA.
  • Another object of the invention relates to the use of a single- or double-stranded nucleic acid which comprises the sequence of a human homologue of the sgk family or one of its fragments, in particular the hsgkl gene itself or one of its fragments, for the diagnosis of a predisposition to the formation of the long -Q / T syndrome.
  • the single- or double-stranded nucleic acid is preferably at least 10 nucleotides / base pairs in length.
  • certain antibodies which are directed against substrates of the human homologues of the sgk family, in particular against substrates of the hsgkl, are also suitable for diagnosing a predisposition to the formation of Long-Q / T syndrome and hypertension.
  • This diagnostic Antibodies are preferably directed against such an epitope of the human homologues of the sgk family, in particular the hsgkl, which contains the phosphorylation site of the substrate either in phosphorylated form or in non-phosphorylated form.
  • the ubiquitin protein ligase Nedd4-2 (Acc No. BAA23711) is used as the substrate of the human homologue of the sgk family.
  • This ubiquitin protein ligase is a protein which is specifically phosphorylated by the human homologues of the sgk family [Debonneville et al., Phosphorylation of Nedd4-2 by Sgkl regulates epithelial Na (+) channel cell surface expression. EMBO J., 2001; 20: 7052-7059; Snyder et al., Serum and glucocorticoid-regulated kinase modulates Nedd4-2-mediated inhibition of the epithelial Na (+) channel. J. Biol.
  • Phosphorylation sites for the hsgkl have the consensus sequence (R X R X X S / T), where R is arginine, S is serine, T is threonine and X is any amino acid.
  • Nedd4-2 Acc No. BAA23711
  • the abovementioned antibodies for diagnosing a predisposition to the formation of the Long-Q / T syndrome are therefore preferably directed against the substrate Nedd4-2 and particularly preferably against a protein region of Nedd4-2 with the sequence of the potential phosphorylation site for the hsgkl, the consensus Sequence (RXRXXS / T).
  • these antibodies are directed against those Nedd4-2 protein regions which comprise at least one of the two potential phosphorylation sites serine at amino acid position 382 and / or serine at amino acid position 468.
  • kits for the diagnosis of Long-QT syndrome or other diseases which manifest themselves in an extension of the Q / T time preferably contains antibodies, or in particular, directed against the human homologs of the sgk protein family
  • kits can also contain antibodies that are directed against the human homologs of the sgk protein family and nucleic acids that hybridize with the human homologues of the sgk gene family under stringent conditions.
  • the kit according to the invention for diagnosing Long-Q / T syndrome can also be antibodies which are directed against the hsgkl protein, or
  • hybridization under stringent conditions is understood to mean hybridization under such hybridization conditions with regard to the hybridization temperature and formamide content of the hybridization solution as is described in the relevant specialist literature (Sambrook-J and Russell-DW (2001) Cold Spring Harbor, NY, CSHL Press) has been described.
  • the diagnostic kit can contain single or double-stranded nucleic acids as hybridization probes that have a sequence according to SEQ ID No. Have 1 or 2 which are at least 10 nucleotides / base pairs long and which comprise the polymorphism at position 732/733 in intron 2 of the hsgkl gene either with or without the insertion of the nucleotide G.
  • those antibodies are provided which are specifically directed against regions of the hsgkl protein whose presence in the hsgkl protein depends on the presence of the G insertion at position 732/733 in intron 2 of the hsgkl gene.
  • regions which are alternatively spliced out in the immature mRNA due to the presence or absence of this G insertion and therefore are not present in the mature mRNA and in the protein resulting therefrom are suitable as immunogenic epitopes against which diagnostic antibodies are directed can.
  • nucleic acid regions of the hsgkl gene are also particularly suitable as diagnostic hybridization probes which can hybridize with such a gene region spliced out at position 732/733 depending on the G insertion.
  • the kit for diagnosing Long-Q / T syndrome can preferably also contain such nucleic acid fragments as specific hybridization probes that the known SNPs in the hsgkl gene, in particular the SNP in exon 8 (C2617T, D240D), the SNP in intron 6 (T2071C ) and / or the SNP in intron 2 at position 732/733 (insertion of G).
  • SNPs in the hsgkl gene in particular the SNP in exon 8 (C2617T, D240D), the SNP in intron 6 (T2071C ) and / or the SNP in intron 2 at position 732/733 (insertion of G).
  • a “functional activator” is to be understood as a substance that activates the physiological function of the corresponding kinase of the sgk family.
  • a “positive transcription regulator” is to be understood as a substance that activates the expression of the corresponding kinase of the sgk family.
  • Another object of the invention thus relates to the use of a functional activator or a positive transcription regulator of a human homologue of the sgk family, in particular the hsgkl, for lowering the Q / T time and in particular for the therapy and / or prophylaxis of the Long-QT syndrome .
  • Known functional activators and / or positive transcription regulators of the human human homologues of the sgk family, in particular the hsgkl are glucocorticoids, mineral corticoids, aldosterone, gonadotropins, and a number of cytokines, in particular TGF-ß.
  • the invention therefore further relates to the use of substances selected from the group consisting of glucocorticoids, mineral corticoids, aldosterone, gonadotropins and cytokines, in particular TGF- ⁇ , for the manufacture of a medicament for the therapy and / or prophylaxis of Long-QT syndrome.
  • the invention further relates to a medicament containing a substance selected from the group of substances mentioned above for the therapy and / or prophylaxis of the Long-Q / T syndrome.
  • test subjects were all members of the German-Caucasian breed and came from different parts of Germany. Blood was taken from the twins and their parents for verification of the bipolar structure and for further molecular genetic analyzes. Each participating subject was previously examined by a doctor. No chronic medical illness was known to any of the test subjects. After 5 min, the blood pressure of the test person in the sitting position was measured by a trained doctor using a standardized mercury sphygmomanometer (2 measurements with a time interval of 1 min). The mean of the two measurements was used as the blood pressure value.
  • dizygot twins for correlation studies is that they match in age and that the external influences on their phenotypes can be considered minimal (Martin et al., Nat Genet 1997, 17: 387-392).
  • PCR polymerase chain reaction
  • hsgkl gene For the molecular genetic analysis of the target gene, here the hsgkl gene, three further microsatellite marker regions (d6s472, d6sl038, d6s270) in the immediate vicinity of the hsgkl locus were amplified by PCR and then compared with the corresponding samples from the other twin and the parents , In this way it was possible to decide whether the twins had inherited identical or different alleles from their parents with regard to the allele examined.
  • the correlation analysis was carried out using the so-called "structural equation modeling" (SEM) model (Eaves et al., Behav Genet 1996, 26: 519-525; Neale, 1997: Mx: Statistical modeling.
  • SEM structural equation modeling
  • This model is based on variance-covariance matrices of the test pairs by the probability of them either none, one or two identical alleles are characterized.
  • the variance regarding the phenotype was divided into a variance based on the genetic background of all genes (A), a variance based on the genetic background of the target gene (Q), here the hsgkl gene, and the variance due to external influences (E ) is based.
  • VAR A 2 + Q 2 + E 2
  • the differences between models that take the genetic variance with respect to the target gene hsgkl into account or not take it into account were calculated as ⁇ 2 statistics.
  • the allele ratios for each pair and each locus were calculated using the so-called "multipoint" model (MAPMAKER / SIBS; Kruglyak et al., Am J Hum Genet 1995, 57: 439-454) based on the parental genotypes.
  • the low values for the error probabilities p determined which do not or only slightly exceed the accepted error probability of p ⁇ 0.01, prove the direct correlation between the genetic variance with regard to the hsgkl locus and the phenotypically determined variance the measured blood pressure.
  • the SNPs in the hsgkl gene published in databases were first examined to determine whether they were real SNPs - and not pure sequencing errors - and whether the SNPs were sufficient are polymorphic to provide the basis for diagnostic evidence of a predisposition to hypertension.
  • Blood samples were taken from a sample of the 75 pairs of twins. After amplification of the genomic DNA of the hsgkl gene from the blood samples by means of PCR the exons and introns (but not the promoter region) of the hsgkl gene were sequenced directly and completely using suitable sequencing primers. In a sequence comparison of the hsgkl genes, which originated from different subjects, a further polymorphism in intron 2 was noticed, consisting of the insertion of an additional nucleotide G in position 732/733.
  • test subjects showed this the rarer WT / WT genotype significantly shorter Q / T times than heterozygous WT / InsG subjects and these in turn significantly shorter Q / T times than subjects with the more common InsG / InsG genotype (see Table 3). Longer Q / T times increase the risk of developing cardiac arrhythmias, in particular the Long Q / T syndrome.

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Abstract

The invention relates to the use of single- or double-stranded nucleic acids that contain a fragment of the hsgk in the diagnosis of hypertonia. The said fragment has a minimum length of 10 nucleotides/base pairs and the said fragment further comprises a polymorphism which is the result of the presence or absence of an insert of the nucleotide G in position 732/733 in intron 2 of the hsgk1 gene. The invention also relates to the use of the direct correlation between overexpression or the functional molecular modification of human homologues of the sgk family and the length of the Q/T time in the diagnosis of the Long QT syndrome, and to the use of the nucleic acid of a human homologue of the sgk gene family or of one of its fragments in the diagnosis of the Long QT syndrome. Polymorphisms of single nucleotides (single nucleotide polymorphisms = SNP) in the human homologues of the sgk gene family are especially useful in the diagnosis of a congenital predisposition for the Long QT syndrome. In another aspect, the invention relates to the use of a functional activator or a transcriptional factor which boosts expression of the genes of the sgk family for producing a drug for use in the therapy and/or the prophylaxis of the Long QT syndrome.

Description

Verwendung eines neuen Polymorphismus im hsgkl-Gen zur Diagnose der Hypertonie und Verwendung der sgk-Genfamilie zur Diagnose und Therapie des Use of a new polymorphism in the hsgkl gene for diagnosis of hypertension and use of the sgk gene family for diagnosis and therapy of
Long-Q/T-SyndromsLong-Q / T syndrome
Die vorliegende Erfindung betrifft die Verwendung einer einzel- oder doppelsträngigen Nukleinsäure enthaltend ein Fragment der hsgk zur Diagnose von Hypertonie, wobei das besagte Fragment mindestens 10 Nukleotide/Basenpaare lang ist und wobei das besagte Fragment weiterhin einen Polymorphismus umfasst, welcher sich aus der Anwesenheit bzw. Abwesenheit einer Insertion des Nukleotids G an Position 732/733 in Intron 2 des hsgkl-Gens ergibt.The present invention relates to the use of a single-stranded or double-stranded nucleic acid containing a fragment of the hsgk for the diagnosis of hypertension, the said fragment being at least 10 nucleotides / base pairs long and the said fragment further comprising a polymorphism which results from the presence or Absence of an insertion of nucleotide G at position 732/733 in intron 2 of the hsgkl gene results.
Die vorliegende Erfindung betrifft weiterhin die Verwendung der direkten Korrelation zwischen der Überexpression oder der funktionalen molekularen Modifikation von humanen Homologen der sgk-Familie und der Länge der Q/T-Zeit zur Diagnose des Long- Q/T-Syndroms, sowie die Verwendung der Nukleinsäure eines humanen Homologen der sgk-Genfamilie oder eines ihrer Fragmente zur Diagnose des Long-Q/T-Syndroms. Insbesondere lassen sich auch hier Polymorphismen einzelner Nukleotide (single nucleotide polymorphisms = SNP) in den humanen Homologen der sgk-Genfamilie zur Diagnose einer genetisch bedingten Prädisposition zum Long-Q/T-Syndrom einsetzen.The present invention further relates to the use of the direct correlation between the overexpression or the functional molecular modification of human homologs of the sgk family and the length of the Q / T time for the diagnosis of Long Q / T syndrome, and the use of the nucleic acid a human homologue of the sgk gene family or one of its fragments for the diagnosis of Long-Q / T syndrome. In particular, polymorphisms of single nucleotides (single nucleotide polymorphisms = SNP) can also be used in the human homologues of the sgk gene family for the diagnosis of a genetic predisposition to Long-Q / T syndrome.
In einem weiteren Aspekt betrifft die Erfindung die Verwendung eines funktionalen Aktivators oder eines Transkriptionsfaktors, der die Expression der Gene der sgk-Familie steigert, zur Herstellung eines Arzneimittels zur Therapie und/oder zur Prophylaxe des Long-Q/T-Syndroms.In a further aspect, the invention relates to the use of a functional activator or a transcription factor which increases the expression of the genes of the sgk family for the manufacture of a medicament for the therapy and / or prophylaxis of Long-Q / T syndrome.
Zahlreiche extrazelluläre Signale fuhren zu intrazellulären Phosphorylierungs- /Dephosphorylierungskaskaden, um eine schnelle Übertragung dieser Signale von der Plasmamembran und ihren Rezeptoren in das Zytoplasma und den Zellkern zu gewährleisten. Die Spezifität dieser reversiblen Signaltransduktionskaskaden wird durch eine Vielzahl von einzelnen Proteinen, insbesondere von Kinasen, die eine Phosphatgruppe auf individuelle Substrate übertragen, ermöglicht. Die Serum- und Glucocorticoid-abhängige Kinase (sgk), eine Serin/Threonin-Kinase, deren Expression durch Serum und Glucocorticoide gesteigert wird, wurde zunächst aus Rattenmarnmakarzinomazellen kloniert (Webster et al., 1993). Die humane Version der sgk, die hsgkl, wurde aus Leberzellen kloniert (Waldegger et al., 1997). Es zeigte sich, daß die Expression der hsgkl durch die Regulation des Zellvolumens beeinflusst wird. Für die Expression der Ratten-sgk konnte eine solche Abhängigkeit vom Zellvolumen bisher nicht nachgewiesen werden. Weiterhin ergab sich, daß die Ratten-Kinase den epithelialen Na+- Kanal (ENaC) stimuliert (Chen et al, 1999; Naray-Pejes-Toth et al, 1999). Der ENaC spielt wiederum eine entscheidende Rolle bei der renalen Na -Ausscheidung. Eine gesteigerte Aktivität des ENaC führt zu einer verstärkten renalen Retention von Natrium- Ionen, und auf diese Weise zur Entwicklung von Hypertonie, wie WO02/074987 A2 zeigt.Numerous extracellular signals lead to intracellular phosphorylation / dephosphorylation cascades in order to ensure rapid transmission of these signals from the plasma membrane and its receptors into the cytoplasm and the cell nucleus. The specificity of these reversible signal transduction cascades is made possible by a large number of individual proteins, in particular kinases, which transfer a phosphate group to individual substrates. The serum and glucocorticoid-dependent kinase (sgk), a serine / threonine kinase, the expression of which is increased by serum and glucocorticoids, was first cloned from rat breast cancer cells (Webster et al., 1993). The human version of the sgk, the hsgkl, was cloned from liver cells (Waldegger et al., 1997). It was shown that the expression of the hsgkl is influenced by the regulation of the cell volume. Such a dependence on the cell volume has so far not been demonstrated for the expression of the rat sgk. Furthermore, it was found that the rat kinase stimulates the epithelial Na + channel (ENaC) (Chen et al, 1999; Naray-Pejes-Toth et al, 1999). The ENaC in turn plays a crucial role in renal Na excretion. An increased activity of the ENaC leads to an increased renal retention of sodium ions, and in this way to the development of hypertension, as shown by WO02 / 074987 A2.
Schließlich wurden zwei weitere Mitglieder der humanen sgk-Genfamilie kloniert, die hsgk2 und hsgk3 (Kobayashi et al., 1999), die beide - wie auch die hsgkl - durch Insμlin und IGF1 über den PI3 Kinase- Weg aktiviert werden. Elektrophysiologische Experimente zeigten, daß eine Coexpression der hsgk2 und hsgk3 ebenfalls eine signifikante Zunahme der Aktivität des ENaC zur Folge hat.Finally, two other members of the human sgk gene family were cloned, the hsgk2 and hsgk3 (Kobayashi et al., 1999), both of which - like the hsgkl - are activated by Insμlin and IGF1 via the PI3 kinase pathway. Electrophysiological experiments showed that coexpression of the hsgk2 and hsgk3 also resulted in a significant increase in the activity of the ENaC.
Aus der DE 197 08 173 AI geht hervor, daß die hsgkl bei vielen Krankheiten, bei denen Zellvolumenänderungen eine entscheidende pathophysiologische Rolle spielen, wie beispielsweise Hypernatriämie, Hyponatriämie, Diabetes mellitus, Niereninsuffizienz, Hyperkatabolismus, hepatische Encephalopathie und mikrobielle oder virale Infektionen, ein beträchtliches diagnostisches Potential besitzt.DE 197 08 173 AI shows that the hsgkl is a considerable diagnostic tool in many diseases in which cell volume changes play a decisive pathophysiological role, such as, for example, hypernatremia, hyponatremia, diabetes mellitus, renal insufficiency, hypercatabolism, hepatic encephalopathy and microbial or viral infections Has potential.
In der WO 00/62781 wurde beschrieben, daß die hsgkl den endothelialen Na+-Kanal aktiviert, wodurch die renale Na+-Resorption erhöht wird. Da diese gesteigerte renale Na+- Resorption mit Hypertonie einhergeht, wurde hier vermutet, daß eine gesteigerte Expression der hsgkl zur Hypertonie, eine verminderte Expression der hsgkl letztlich zur Hypotonie führen sollte.It has been described in WO 00/62781 that the hsgkl activates the endothelial Na + channel, which increases renal Na + absorption. Since this increased renal Na + absorption is associated with hypertension, it was assumed here that an increased expression of the hsgkl should lead to hypertension, a reduced expression of the hsgkl should ultimately lead to hypotension.
Auch in DE 100 421 37 wurde ein ähnlicher Zusammenhang zwischen der Überexpression bzw. Überaktivität der humanen Homologen hsgk2 und hsgk3 mit der Überaktivierung des ENaCs, der daraus resultierenden verstärkten renalen Na -Resorption und der sich daraus entwickelnden Hypertonie beschrieben. Weiterhin wurde bereits das diagnostische Potential der Kinasen hsgk2 und hsgk3 bezüglich der arteriellen Hypertonie diskutiert. In WO02/074987 A2 wird der Zusammenhang zwischen dem Auftreten zweier verschiedener Polymorphismen (single nucleotide polymorphism (SNP)) einzelner Nukleotide im hsgkl -Gen mit einer genetisch bedingten Prädisposition zur Hypertonie offenbart. Hierbei handelt es sich um einen Polymorphismus in Intron 6 (T— >C) und um einen Polymorphismus in Exon 8 (C→T) im hsgkl -Gen. Aus Tabelle 5 aus WO02/074987 A2 geht insbesondere hervor, daß ein starkes Korrelationsungleichgewicht zwischen den beiden analysierten SNPs besteht: Die meisten CC-Träger des SNPs in Exon 8 sind auch Intron 6 TT-Träger (nämlich 64%), während nur wenige Exon 8 TT-Träger auch gleichzeitig Intron 6 CC-Träger sind (lediglich 2%). Diese beobachteten Korrelationen zwischen dem Auftreten der Polymorphismen in Intron 6 und Exon 8 begründen die Notwendigkeit, den Genotyp für beide Polymorphismen (Intron 6 und Exon 8) zu analysieren, um eine Prädisposition zur Hypertonie nachzuweisen, was zu einem hohen technischen und zeitlichen Aufwand führt.DE 100 421 37 also describes a similar relationship between the overexpression or overactivity of the human homologues hsgk2 and hsgk3 with the overactivation of the ENaC, the resulting increased renal Na absorption and the hypertension that develops from this. Furthermore, the diagnostic potential of the kinases hsgk2 and hsgk3 regarding arterial hypertension has already been discussed. WO02 / 074987 A2 discloses the relationship between the occurrence of two different polymorphisms (single nucleotide polymorphism (SNP)) of individual nucleotides in the hsgkl gene with a genetic predisposition to hypertension. This is a polymorphism in intron 6 (T—> C) and a polymorphism in exon 8 (C → T) in the hsgkl gene. Table 5 from WO02 / 074987 A2 shows in particular that there is a strong correlation imbalance between the two SNPs analyzed: Most CC carriers of the SNP in exon 8 are also intron 6 TT carriers (namely 64%), while only a few exons 8 TT carriers are also intron 6 CC carriers (only 2%). These observed correlations between the occurrence of the polymorphisms in intron 6 and exon 8 justify the need to analyze the genotype for both polymorphisms (intron 6 and exon 8) in order to demonstrate a predisposition to hypertension, which leads to a high technical and time expenditure.
Aufgabe der vorliegenden Erfindung ist es daher, einen weiteren Polymorphismus im hsgkl -Gen bereitzustellen, dessen Auftreten in der einen oder anderen Version eventuell noch besser mit dem phänotypischen Auftreten der Hypertonie im Patienten korreliert als die beiden bekannten Polymorphismen in Exon 8 und Intron 6. Insbesondere wäre das Bereitstellen eines einzigen SNPs, der mit der Prädisposition zur Hypertonie korreliert und dessen Gegenwart in der einen oder anderen Version sogar Folgen für eine funktionale molekulare Modifikation des hsgkl -Proteins hat, von großem Vorteil.The object of the present invention is therefore to provide a further polymorphism in the hsgkl gene, the occurrence of which in one version or the other may correlate even better with the phenotypic occurrence of hypertension in the patient than the two known polymorphisms in exon 8 and intron 6. In particular it would be of great advantage to provide a single SNP that correlates with the predisposition to hypertension and whose presence in one version or another even has consequences for a functional molecular modification of the hsgkl protein.
Diese Aufgabe wurde gelöst durch die Bereitstellung eines neuen Polymorphismus im hsgkl -Gen, der aus der Insertion des Nukleotids G an der Position 732/733 besteht. Es hat sich gezeigt, daß Individuen, die eine solche Insertion des Nukleotids G an der PositionThis object was achieved by providing a new polymorphism in the hsgkl gene, which consists of the insertion of the nucleotide G at position 732/733. It has been shown that individuals who insert such nucleotide G at the position
732/733 besitzen (InsG/InsG), häufiger vorkommen und eine geringere Prädisposition zur732/733 (InsG / InsG), occur more frequently and have a lower predisposition to
Ausbildung der Hypertonie besitzen. Individuen, die hingegen eine solche Insertion an derHave hypertension training. Individuals who, on the other hand, have such an insertion on the
Position 732/733 nicht besitzen (WT/WT), kommen seltener vor und haben eine deutlich erhöhte Prädisposition zur Ausbildung der Hypertonie. Nach den bisherigen Ergebnissen scheint diese Korrelation zwischem dem Genotyp bezüglich des Polymorphismus anDo not have position 732/733 (WT / WT), occur less frequently and have a significantly increased predisposition to develop hypertension. According to the results so far, this correlation between the genotype and the polymorphism appears
Position 732/733 in Intron 2 und der Prädisposition zur Ausbildung der Hypertonie eine deutlich höhere Signifikanz zu besitzen als die entsprechenden Korrelationen bezüglich derPosition 732/733 in intron 2 and the predisposition to hypertension to have a significantly higher significance than the corresponding correlations with regard to the
Polymorphismen in Exon 8 und Intron 6 (siehe Tabelle 1). Weiterhin ist aufgrund der Voraussage von bekannten Prädiktionsprogrammen anzunehmen, daß von der An- bzw. Abwesenheit der G-Insertion an Position 732/733 in Intron 2 des hsgkl-Gens die Expression einer spezifischen Spleiß- Variante des hsgkl-Gens abhängt. Die Expression einer solchen spezifischen Spleiß-Variante des hsgkl-Gens könnte eine funktionale molekulare Modifikation des hsgkl -Proteins zur Folge haben, die zu einer modifizierten Aktivität der hsgkl, insbesondere zu einer gesteigerten Aktivität der hsgkl führt. Die physiologischen Folgen dieser molekularen Modifikation des hsgkl - Proteins, insbesondere eine gesteigerte Aktivität der hsgkl, könnten dann letztlich die Ausbildung der Symptome der Hypertonie zur Folge haben.Polymorphisms in exon 8 and intron 6 (see Table 1). Furthermore, based on the prediction of known prediction programs, it can be assumed that the expression of a specific splice variant of the hsgkl gene depends on the presence or absence of the G insertion at position 732/733 in intron 2 of the hsgkl gene. The expression of such a specific splice variant of the hsgkl gene could result in a functional molecular modification of the hsgkl protein, which leads to a modified activity of the hsgkl, in particular to an increased activity of the hsgkl. The physiological consequences of this molecular modification of the hsgkl protein, in particular an increased activity of the hsgkl, could ultimately result in the development of the symptoms of hypertension.
In einem ersten Aspekt, betrifft die Erfindung die Verwendung einer isolierten einzel- oder doppelsträngigen Nukleinsäure, welche ein Fragment der Nukleinsäuresequenz nach SEQ ID No. 1 oder nach SEQ ID No. 2 umfasst, zur Diagnose von Hypertonie, wobei das besagte Fragment mindestens 10 Nukleotide/Basenpaare, vorzugsweise mindestens 15 Nukleotide/Basenpaare, insbesondere mindestens 20 Nukleotide/Basenpaare lang ist und wobei das besagte Fragment den Polymorphismus in Intron 2 des hsgkl-Gens entweder mit oder ohne die Insertion des Nukleotids G an Position 732/733 umfaßt.In a first aspect, the invention relates to the use of an isolated single- or double-stranded nucleic acid which contains a fragment of the nucleic acid sequence according to SEQ ID No. 1 or according to SEQ ID No. 2 comprises, for the diagnosis of hypertension, wherein said fragment is at least 10 nucleotides / base pairs, preferably at least 15 nucleotides / base pairs, in particular at least 20 nucleotides / base pairs long, and wherein said fragment has the polymorphism in intron 2 of the hsgkl gene either with or without the insertion of nucleotide G at position 732/733.
SEQ ID No. 1 beschreibt die genomische DNA-Sequenz der hsgkl ohne die Insertion des Nukleotids G (bzw. GTP) an Position 732/733 in Intron 2 des hsgkl-Gens, die sogenannte „Wildtyp (WT)"-Sequenz und SEQ ID No. 2 beschreibt die genomische DNA-Sequenz der hsgkl mit der Insertion des Nukleotids G (bzw. GTP) an Position 732/733 in Intron 2 des hsgkl-Gens, die sogenannte „Insertion G (InsG)"-Sequenz.SEQ ID No. 1 describes the genomic DNA sequence of the hsgkl without the insertion of the nucleotide G (or GTP) at position 732/733 in intron 2 of the hsgkl gene, which describes the so-called “wild type (WT)” sequence and SEQ ID No. 2 the genomic DNA sequence of the hsgkl with the insertion of the nucleotide G (or GTP) at position 732/733 in intron 2 of the hsgkl gene, the so-called “insertion G (InsG)” sequence.
In einem zweiten Aspekt betrifft die vorliegende Erfindung einen Kit zur Diagnose der Hypertonie, enthaltend mindestens eine isolierte einzel- oder doppelsträngige Nukleinsäure, die ein Fragment der Sequenz nach SEQ ID No. 1 oder 2 umfasst. Das besagte Fragment aus SEQ ID No. 1 oder 2 ist hierbei mindestens 10 Nukleotide/Basenpaare, vorzugsweise mindestens 15 Nukleotide/Basenpaare, insbesondere mindestens 20 Nukleotide/Basenpaare lang. Weiterhin soll das besagte Fragment aus SEQ ID No. 1 oder 2 den Polymorphismus in Intron 2 des hsgkl-Gens entweder mit oder ohne die Insertion des Nukleotids G an Position 732/733 umfassen.In a second aspect, the present invention relates to a kit for diagnosing hypertension, comprising at least one isolated single- or double-stranded nucleic acid which contains a fragment of the sequence according to SEQ ID No. 1 or 2 includes. The said fragment from SEQ ID No. 1 or 2 is at least 10 nucleotides / base pairs, preferably at least 15 nucleotides / base pairs, in particular at least 20 nucleotides / base pairs. Furthermore, said fragment from SEQ ID No. 1 or 2 comprise the polymorphism in intron 2 of the hsgkl gene either with or without the insertion of nucleotide G at position 732/733.
Alternativ kann der Kit zur Diagnose der Hypertonie -zusätzlich oder anstelle der oben genannten einzel- oder doppelsträngigen Nukleinsäure- auch mindestens einen Antikörper enthalten, der gegen eine solche Region des hsgk-Proteins gerichtet ist, deren Präsenz im hsgkl -Protein von der Gegenwart der Insertion des Nukleotids G an der Position 732/733 in Intron 2 des entsprechenden kodierenden hsgk-Gens abhängig ist. Würde beispielsweise durch die Anwesenheit der G-Insertion an der Position 732/733 im hsgkl-Gen das Herausspleißen eines Exons induziert werden, so könnte ein Antikörper, der gegen genau diese herausgespleißte Proteinregion gerichtet ist, zur Detektion der Polymorphismus- Version des Individuums verwendet werden. Mit einem solchen Antikörper könnte daher eine Prädisposition zur Ausbildung der Hypertonie diagnostiziert werden.Alternatively, the kit for the diagnosis of hypertension — in addition to or instead of the single or double-stranded nucleic acid mentioned above — may also contain at least one antibody which is directed against such a region of the hsgk protein whose presence in the hsgkl protein is dependent on the presence of the insertion of nucleotide G at position 732/733 in intron 2 of the corresponding coding hsgk gene. For example, if the presence of the G insert at position 732/733 in the hsgkl gene induced the splicing of an exon, an antibody directed against precisely this spliced-out protein region could be used to detect the polymorphism version of the individual , With such an antibody, a predisposition to develop hypertension could therefore be diagnosed.
In einem dritten Aspekt betrifft die Erfindung ein Verfahren zur Diagnose der Hypertonie, welches die folgenden Verfahrensschritte umfaßt: a) Entnahme einer Körperprobe aus einem Individuum, b) gegebenenfalls Isolierung und/oder Amplifizierung von genomischer DNA, cDNA oder mRNA aus der Körperprobe nach a), c) Quantifizierung der Allele, die eine Insertion des Nukleotides G an der Position 732/733 in Intron 2 des hsgkl-Gens besitzen.In a third aspect, the invention relates to a method for diagnosing hypertension, which comprises the following method steps: a) taking a body sample from an individual, b) optionally isolating and / or amplifying genomic DNA, cDNA or mRNA from the body sample according to a) , c) Quantification of alleles which have an insertion of nucleotide G at position 732/733 in intron 2 of the hsgkl gene.
In Schritt a) wird einem Test-Individuum, welches vorzugsweise ein Säugetier, insbesondere ein Mensch ist, eine Körperprobe entnommen. Bei diesem erfindungsgemäßen Diagnose-Verfahren werden als Körperproben des Patienten vorzugsweise Blutproben oder auch Speichelproben verwendet, die zelluläres Material umfassen und relativ wenig aufwendig vom Patienten gewonnen werden können. Andere Körperproben, die ebenfalls Zellen umfassen, wie beispielsweise Gewebe- oder Zellproben u.a., können jedoch auch verwendet werden.In step a), a body sample is taken from a test individual, who is preferably a mammal, in particular a human. In this diagnostic method according to the invention, blood samples or also saliva samples are preferably used as body samples of the patient, which comprise cellular material and can be obtained by the patient with relatively little effort. However, other body samples that also include cells, such as tissue or cell samples, etc., can also be used.
In Schritt b) wird aus der Körperprobe aus a) gegebenenfalls entweder genomische DNA oder cDNA oder auch mRNA nach Standardmethoden (Sambrook-J and Russell-DW (2001) Cold Spring Harbor, NY, CSHL Press) präpariert und/oder gegebenenfalls amplifiziert. Hierbei können alle geeigneten Methoden verwendet werden, die dem Fachmann geläufig sind. Auf diesen DNA-Isolationsschritt bzw. DNA- Amplifikationsschritt kann gegebenenfalls auch verzichtet werden, insbesondere wenn in Schritt c) Nachweismethoden eingesetzt werden, die selbst einen PCR- Amplifikationsschritt beinhalten.In step b), either genomic DNA or cDNA or also mRNA is prepared from the body sample from a) using standard methods (Sambrook-J and Russell-DW (2001) Cold Spring Harbor, NY, CSHL Press) and / or optionally amplified. All suitable methods known to the person skilled in the art can be used here. This DNA isolation step or DNA amplification step can optionally also be dispensed with, in particular if detection methods are used in step c) which themselves contain a PCR amplification step.
In Schritt c) wird schließlich die Anzahl der Allele quantifiziert, die eine Insertion des Nukleotides G an der Position 732/733 in Intron 2 des hsgkl-Gens besitzen. Hierbei dürften solche Individuen, die zwei WT-Allele haben, eine Prädisposition zur Ausbildung der Hypertonie besitzen. Die Quantifizierung/Identifizierung der Allele bezüglich des Polymorphismus an Position 732/733 in Intron 2 des hsgkl-Gens kann durch die Anwendung verschiedener Verfahren, die dem Fachmann bekannt sind, erfolgen. Einige bevorzugte Vefahren werden nachfolgend näher erläutert. Die Quantifizierung der Anzahl der Allele, die eine Insertion des Nukleotides G an der Position 732/733 in Intron 2 des hsgkl-Gens besitzen, ist jedoch nicht auf die nachfolgenden bevorzugten Verfahren beschränkt.In step c) the number of alleles is finally quantified which have an insertion of the nucleotide G at position 732/733 in intron 2 of the hsgkl gene. Individuals who have two WT alleles are likely to be predisposed to training of hypertension. The quantification / identification of the alleles with regard to the polymorphism at position 732/733 in intron 2 of the hsgkl gene can be carried out using various methods which are known to the person skilled in the art. Some preferred methods are explained in more detail below. However, the quantification of the number of alleles that have an insertion of nucleotide G at position 732/733 in intron 2 of the hsgkl gene is not limited to the preferred methods below.
Vorzugsweise kann der Genotyp (bzw. die Anzahl der Allele) bezüglich des Polymorphismus an Position 732/733 durch direkte Sequenzierung der DNA, vorzugsweise der genomischen DNA, aus der Körperprobe an der besagten Position 732/733 in Intron 2 des hsgkl-Gens identifiziert werden. Hierzu müssen nach bekannten Sequenzierungsmethoden kurze Oligonukleotide mit Sequenzen aus der näheren Umgebung der Position 732/733 des hsgkl-Gens als Sequenzierprimer zur Verfügung gestellt werden.Preferably, the genotype (or the number of alleles) can be identified with respect to the polymorphism at position 732/733 by direct sequencing of the DNA, preferably the genomic DNA, from the body sample at said position 732/733 in intron 2 of the hsgkl gene , For this, short oligonucleotides with sequences from the vicinity of position 732/733 of the hsgkl gene must be made available as sequencing primers according to known sequencing methods.
Ein weiteres, ebenfalls bevorzugtes Verfahren zur Identifizierung des Genotyps (bzw. zur Quantifizierung der Anzahl der Allele) bezüglich des Polymorphismus an Position 732/733 sind alle bekannten Verfahren, die auf der Hybridisierung der genomischen DNA aus der Körperprobe mit spezifischen Hybridisierungssonden beruhen.Another, likewise preferred method for identifying the genotype (or for quantifying the number of alleles) with regard to the polymorphism at position 732/733 are all known methods which are based on the hybridization of the genomic DNA from the body sample with specific hybridization probes.
Ein Beispiel für ein solches Hybridisierungsverfahren ist z.B. der Southern Blot. Sollte beispielsweise durch die Anwesenheit der G-Insertion an Position 732/733 in Intron 2 des hsgkl-Gens eine Schnittstelle für eine Restriktionsendonuklease zerstört oder auch gebildet werden, könnten mit Hilfe spezifischer Hybridisierungssonden Nukleinsäurefragmente mit solchen Längen detektiert werden, die von den entsprechenden Fragmentlängen im WT-Allel abweichen. Damit könnte ein spezifischer Genotyp bezüglich des fraglichen Polymorphismus an Position 732/733 detektiert werden.An example of such a hybridization method is e.g. the southern blot. If, for example, the presence of the G insert at position 732/733 in intron 2 of the hsgkl gene destroys or also forms an interface for a restriction endonuclease, nucleic acid fragments with lengths that differ from the corresponding fragment lengths in the WT alleles differ. A specific genotype could thus be detected with regard to the polymorphism in question at position 732/733.
Sollte durch die An- oder Abwesenheit der G-Insertion an Position 732/733 eine alternative Spleißvariante exprimiert werden, der ein bestimmtes Exon fehlt, könnte der Genotyp bezüglich des fraglichen Polymorphismus an Position 732/733 auch mit Hilfe einer spezifischen Hybridisierungssonde aus dem in der Spleiß- Variante fehlenden Exon detektiert werden. Ein anderes Beispiel für ein Hybridisierungsverfahren ist die Hybridisierung der genomischen DNA aus der Körperprobe mit einem markierten, einzelsträngigen Oligonukleotid von vorzugsweise 15- 25 Nukleotiden Länge, das entweder eine G- Insertion an Position 732/733 besitzt oder nicht besitzt. Unter sehr spezifischen Hybridisierungsbedingungen, die für jedes individuelle Oligonukleotid nach bekannten Methoden experimentell ausgetestet werden können, kann dann ein vollständig hybridisierendes Oligonukleotid von einem Oligonukleotid mit einer einzigen Basen- Fehlpaarung unterschieden werden.If the presence or absence of the G insertion at position 732/733 expresses an alternative splice variant that lacks a specific exon, the genotype for the polymorphism in question at position 732/733 could also be determined with the help of a specific hybridization probe Splice variant missing exon can be detected. Another example of a hybridization method is the hybridization of the genomic DNA from the body sample with a labeled, single-stranded oligonucleotide, preferably 15-25 nucleotides in length, which either has a G insertion at position 732/733 or does not have it. Under very specific hybridization conditions that can be tested experimentally for each individual oligonucleotide by known methods, a completely hybridizing oligonucleotide can then be distinguished from an oligonucleotide with a single base mismatch.
Weitere bevorzugte Verfahren zur Identifizierung des Genotyps (bzw. zur Quantifizierung der Anzahl der Allele) bezüglich des Polymorphismus an Position 732/733 stellen insbesondere der PCR-Oligonukleotid-Elongations-Assay oder der Ligations-Assay dar.Further preferred methods for identifying the genotype (or for quantifying the number of alleles) with regard to the polymorphism at position 732/733 are, in particular, the PCR oligonucleotide elongation assay or the ligation assay.
Bei dem PCR-Oligonukleotid-Elongations-Assay könnte beispielsweise ein Oligonukleotid bereitgestellt werden, welches die Sequenz eines Fragments aus SEQ ID No. 2 und an seinem 3 '-Ende das G an der Polymorphismus-Position 732/733 besitzt. Bei Hybridisierung dieses Oligonukleotids mit einem Proben-Fragment des WT-Allels (ohne G-Insertion) könnte dieses bei einer nachfolgenden PCR-Reaktion aufgrund der Fehlpaarung am 3 '-Ende nicht verlängert und letztlich amplifiziert werden. Bei Hybridisierung dieses Oligonukleotids mit einem InsG-Allel könnte es hingegen aufgrund der perfekten Basenpaarung am 3 '-Ende des Oligonukleotids zur Elongation und letztlich zu einem PCR-Amplifikationsprodukt kommen.In the PCR oligonucleotide elongation assay, for example, an oligonucleotide could be provided which contains the sequence of a fragment from SEQ ID No. 2 and at its 3 'end has the G at polymorphism position 732/733. If this oligonucleotide was hybridized with a sample fragment of the WT allele (without G insertion), this could not be extended and ultimately amplified in a subsequent PCR reaction due to the mismatch at the 3 'end. When this oligonucleotide is hybridized with an InsG allele, on the other hand, due to the perfect base pairing at the 3 'end of the oligonucleotide, elongation and ultimately a PCR amplification product could result.
Ein Ligations-Assay basiert letztlich auf demselben Prinzip wie der PCR-Oligonukleotid- Elongations-Assay: nur solche doppelsträngigen Nuklemsäurefragmente können mit einem anderen doppelsträngigen Nukleinsäurefragment ligiert werden, die an ihrem Ende eine exakte Basenpaarung besitzen. Das Auftreten eines spezifischen Ligationsproduktes kann daher abhängig gemacht werden von der An- bzw. Abwesenheit der G-Insertion an Position 732/733 in Intron 2 des hsgkl-Gens.A ligation assay is ultimately based on the same principle as the PCR oligonucleotide elongation assay: only those double-stranded nucleic acid fragments can be ligated to another double-stranded nucleic acid fragment that have an exact base pairing at the end. The occurrence of a specific ligation product can therefore be made dependent on the presence or absence of the G insertion at position 732/733 in intron 2 of the hsgkl gene.
Neben der Korrelation des erfindungsgemäßen Polymorphismus zur Prädisposition der Hypertonie zeigte sich überraschenderweise noch eine zweite Korrelation des erfindungsgemäßen Polymorphismus zu der Länge der sogenannten Q/T-Zeit. Bei Individuen, die einen WT/WT-Genotyp bezüglich der Position 732/733 in Intron 2 des hsgkl-Gens besitzen, zeigen sich deutlich kürzere Q/T-Zeiten als für Individuen, die einen InsG/InsG-Genotyp besitzen. Heterozygote Individuen (WT/InsG) besitzen mittlere Q/T- Zeiten (siehe Tabelle 3). Eine signifikant verlängerte Q/T-Zeit führt zur Ausbildung des sogenannten Long-Q/T-Syndroms, welches sich in Herz-Rhythmus-Störungen, über Kammerflimmern bis hin zum plötzlichen Herztod äußern kann. Individuen mit dem Genotyp InsG/InsG dürften daher eine Prädisposition zur Entwicklung des Long-Q/T- Syndroms besitzen.In addition to the correlation of the polymorphism according to the invention to the predisposition of hypertension, a second correlation of the polymorphism according to the invention to the length of the so-called Q / T time was surprisingly found. Individuals who have a WT / WT genotype with regard to position 732/733 in intron 2 of the hsgkl gene show significantly shorter Q / T times than for individuals who have an InsG / InsG genotype. Heterozygous individuals (WT / InsG) have medium Q / T Times (see table 3). A significantly prolonged Q / T time leads to the development of the so-called Long Q / T syndrome, which can manifest itself in cardiac arrhythmias, ventricular fibrillation and sudden cardiac death. Individuals with the InsG / InsG genotype are therefore likely to be predisposed to the development of the Long-Q / T syndrome.
Aufgrund der nachgewiesenen direkten Korrelation zwischen der Länge der Q/T-Zeit und der genetischen Ausstattung des hsgkl-Gens, insbesondere zwischen der Länge der Q/T- Zeit und dem Polymorphismus an Position 732/733 in Intron 2 des hsgkl-Gens, ist anzunehmen, daß sich Nukleinsäuren eines anderen humanen Homologen der sgk-Familie ebenfalls zur Diagnose des Long-QT-Syndroms eignen.Due to the proven direct correlation between the length of the Q / T time and the genetic makeup of the hsgkl gene, in particular between the length of the Q / T time and the polymorphism at position 732/733 in intron 2 of the hsgkl gene, to assume that nucleic acids from another human homologue of the sgk family are also suitable for the diagnosis of Long-QT syndrome.
Die mit dem EKG-Messgerät detektierbaren Q-, R- und S-Wellen stellen Meßwerte zur Beurteilung der Erregungsausbreitung dar. Die sogenannte Q/T-Zeit ist als die Zeit definiert, die mit Hilfe eines EKG-Messgerätes vom Beginn der Ausbreitung der T- Welle (dem Auftreten des Q-Ausschlags) bis zum Ende der Erregungsausbreitung, die durch das Ende der T- Welle charakterisiert ist, zu detektieren ist. Damit stellt die Q/T-Zeit die Zeit dar, die zwischen dem Beginn eines neuen Erregungszustandes des Herzens und der Rückkehr in den Ruhezustand vergeht. Eine deutlich verlängerte Q/T-Zeit führt demnach zu Herz-Rhythmus-Störungen und letztlich zu dem bereits genannten Long-Q/T-Syndrom.The Q, R and S waves that can be detected with the ECG measuring device represent measured values for assessing the spread of excitation. The so-called Q / T time is defined as the time that elapses with the help of an EKG measuring device from the start of the spread of the T - Wave (the occurrence of the Q deflection) is to be detected until the end of the excitation propagation, which is characterized by the end of the T wave. The Q / T time thus represents the time that passes between the beginning of a new state of excitation of the heart and the return to the resting state. A significantly longer Q / T time therefore leads to cardiac arrhythmias and ultimately to the Long Q / T syndrome mentioned above.
Ein weiterer Gegenstand der Erfindung ist daher die Verwendung der direkten Korrelation zwischen der Überexpression oder der funktionalen molekularen Modifikation von humanen Homologen der sgk-Familie, insbesondere des hsgkl-Gens, und der Länge der Q/T-Zeit zur Diagnose des Long-QT-Syndroms.The invention therefore furthermore relates to the use of the direct correlation between the overexpression or the functional molecular modification of human homologs of the sgk family, in particular the hsgkl gene, and the length of the Q / T time for diagnosing the Long-QT syndrome.
Unter einem humanen Homologen der sgk-Familie, welches im obigen Sinne eine funktionale molekulare Modifikation umfaßt, versteht man in diesem Zusammenhang ein Homologes der sgk-Familie, das auf eine solche Art und Weise mutiert ist, daß die Eigenschaften, insbesondere die katalytischen Eigenschaften oder auch die Substratsspezifität des entsprechenden Proteins verändert werden.In this context, a human homologue of the sgk family, which comprises a functional molecular modification in the above sense, means a homologue of the sgk family which is mutated in such a way that the properties, in particular the catalytic properties or the substrate specificity of the corresponding protein can also be changed.
Die erfindungsgemäße direkte Korrelation zwischen der Q/T-Zeit und der genetischenThe direct correlation according to the invention between the Q / T time and the genetic one
Ausstattung der humanen Homologen der sgk-Familie impliziert, daß bei einzelnen Patienten individuelle Mutationen in den Genen hsgkl, hsgk2 oder hsgk3 auftreten könnten, die die Expressionshöhe oder die funktioneilen Eigenschaften der Kinasen hsgkl, hsgk2 oder hsgk3 modifizieren, und so zu einer genetisch verursachten Verlängerung der Q/T-Zeit und letztlich zu einer Prädisposition zur Ausbildung des Long-Q/T-Syndrom führen. Solche Mutationen könnten beispielsweise in den regulatorischen Genregionen oder auch in Intron-Sequenzen des sgk-Genlocus auftreten. Andererseits ' könnten individuelle Unterschiede in der genetischen Ausstattung des sgk-Locus auch den kodierenden Genbereich betreffen. Mutationen im kodierenden Bereich könnten dann gegebenenfalls zu einer funktionalen Veränderung der entsprechenden Kinase, so z.B. zu modifizierten katalytischen Eigenschaften der Kinase, die letztlich auch die Q/T-Zeit beeinflussen, führen. Demnach könnten beide oben beschriebenen Mutationsarten eine Verlängerung der Q/T-Zeit und damit letztlich die Prädisposition zur Ausbildung des Long-Q/T-Syndroms bewirken.Equipment of the human homologues of the sgk family implies that individual mutations in the genes hsgkl, hsgk2 or hsgk3 could occur in individual patients, which alter the level of expression or the functional properties of the kinases hsgkl, Modify hsgk2 or hsgk3, and thus lead to a genetically caused extension of the Q / T time and ultimately to a predisposition to the development of Long Q / T syndrome. Such mutations could occur, for example, in the regulatory gene regions or also in intron sequences of the sgk gene locus. On the other hand, individual differences in the genetic makeup of the sgk locus could also affect the coding gene area. Mutations in the coding region could then possibly lead to a functional change in the corresponding kinase, for example to modified catalytic properties of the kinase, which ultimately also influence the Q / T time. Accordingly, both types of mutation described above could cause an extension of the Q / T time and thus ultimately the predisposition to the development of the Long Q / T syndrome.
Die oben beschriebenen Mutationen in den humanen Homologen der sgk-Familie, die die Prädisposition zur Ausbildung des Long-Q/T-Syndroms beim Patienten bewirken, sind in der Regel sogenannte "single nucleotide polymorphisms" (SNP) entweder im Exon- oder im Intron-B ereich dieser Homologen. SNPs im Exon-Bereich der hsgk-Gene können in ihrer weniger häufig auftretenden Version - im folgenden die mutierte Version genannt - gegebenenfalls zu Aminosäureaustauschen im entsprechenden hsgk-Protein und somit zur einer funktionalen Modifikation der Kinase führen. SNPs im Intron-Bereich oder in regulatorischen Sequenzen der hsgk-Gene können in ihrer mutierten Version gegebenenfalls zu einer veränderten Expressionshöhe der entsprechenden Kinase führen. SNPs im Intron-Bereich könnten jedoch auch dann zu einer funktionalen Modifikation der Kinase führen, sofern sie das alternative Spleißen der unreifen mRNA beeinflussen.The mutations described above in the human homologs of the sgk family, which predispose to the development of Long-Q / T syndrome in the patient, are usually so-called "single nucleotide polymorphisms" (SNP) either in the exon or in the intron -Barea of these homologues. SNPs in the exon region of the hsgk genes can, in their less frequently occurring version - hereinafter referred to as the mutated version - possibly lead to amino acid exchanges in the corresponding hsgk protein and thus to a functional modification of the kinase. SNPs in the intron region or in regulatory sequences of the hsgk genes can, in their mutated version, possibly lead to a change in the expression level of the corresponding kinase. However, SNPs in the intron region could also lead to a functional modification of the kinase if they influence the alternative splicing of the immature mRNA.
Ein weiterer Gegenstand der Erfindung betrifft die Verwendung einer einzel- oder doppelsträngigen Nukleinsäure, welche die Sequenz eines humanen Homologen der sgk- Familie oder eines seiner Fragmente, insbesondere das hsgkl -Gen selbst oder eines seiner Fragmente umfaßt, zur Diagnose einer Prädisposition zur Ausbildung des Long-Q/T- Syndroms. Die einzel- oder doppelsträngige Nukleinsäure besitzt hierbei vorzugsweise eine Länge von mindestens 10 Nukleotiden/Basenpaaren.Another object of the invention relates to the use of a single- or double-stranded nucleic acid which comprises the sequence of a human homologue of the sgk family or one of its fragments, in particular the hsgkl gene itself or one of its fragments, for the diagnosis of a predisposition to the formation of the long -Q / T syndrome. The single- or double-stranded nucleic acid is preferably at least 10 nucleotides / base pairs in length.
Neben den oben genannten einzel- oder doppelsträngigen Nukleinsäuren eignen sich auch bestimmte Antikörper, die gegen Substrate der humanen Homologen der sgk-Familie, insbesondere gegen Substrate der hsgkl, gerichtet sind, zur Diagnose einer Prädisposition zur Ausbildung des Long-Q/T-Syndroms und der Hypertonie. Diese diagnostischen Antikörper sind vorzugsweise gegen ein solches Epitop der humanen Homologen der sgk- Familie, insbesondere der hsgkl, gerichtet, welches die Phosphorylierungsstelle des Substrates entweder in phosphorylierter Form oder in nicht phosphorylierter Form enthält.In addition to the single-stranded or double-stranded nucleic acids mentioned above, certain antibodies which are directed against substrates of the human homologues of the sgk family, in particular against substrates of the hsgkl, are also suitable for diagnosing a predisposition to the formation of Long-Q / T syndrome and hypertension. This diagnostic Antibodies are preferably directed against such an epitope of the human homologues of the sgk family, in particular the hsgkl, which contains the phosphorylation site of the substrate either in phosphorylated form or in non-phosphorylated form.
In einer bevorzugten Ausführungsform wird als Substrat des humanen Homologen der sgk- Familie die Ubiquitin-Protein-Ligase Nedd4-2 (Acc No. BAA23711) eingesetzt. Diese Ubiquitin-Protein-Ligase stellt ein Protein dar, welches von den humanen Homologen der sgk-Familie spezifisch phophoryliert wird [Debonneville et al., Phosphorylation of Nedd4- 2 by Sgkl regulates epithelial Na(+) Channel cell surface expression. EMBO J., 2001; 20: 7052-7059; Snyder et al., Serum and glucocorticoid-regulated kinase modulates Nedd4-2- mediated inhibition of the epithelial Na(+) Channel. J. Biol. Chem., 2002, 277: 5-8]. Phosphorylierungsstellen für die hsgkl besitzen die Konsensus-Sequenz (R X R X X S/T), wobei R für Arginin, S für Serin, T für Threonin und X für eine beliebige Aminosäure steht. In Nedd4-2 (Acc No. BAA23711) gibt es zwei potentielle Phosphorylierungsstellen für die hsgkl, auf die die oben genannte Konsensus-Sequenz paßt: das Serin an Aminosäure-Position 382 und das Serin an Aminosäure-Position 468.In a preferred embodiment, the ubiquitin protein ligase Nedd4-2 (Acc No. BAA23711) is used as the substrate of the human homologue of the sgk family. This ubiquitin protein ligase is a protein which is specifically phosphorylated by the human homologues of the sgk family [Debonneville et al., Phosphorylation of Nedd4-2 by Sgkl regulates epithelial Na (+) channel cell surface expression. EMBO J., 2001; 20: 7052-7059; Snyder et al., Serum and glucocorticoid-regulated kinase modulates Nedd4-2-mediated inhibition of the epithelial Na (+) channel. J. Biol. Chem., 2002, 277: 5-8]. Phosphorylation sites for the hsgkl have the consensus sequence (R X R X X S / T), where R is arginine, S is serine, T is threonine and X is any amino acid. In Nedd4-2 (Acc No. BAA23711) there are two potential hsgkl phosphorylation sites to which the above consensus sequence fits: the serine at amino acid position 382 and the serine at amino acid position 468.
Die oben genannten Antikörper zur Diagnose einer Prädisposition zur Ausbildung des Long-Q/T-Syndroms sind daher vorzugsweise gegen das Substrat Nedd4-2 gerichtet und besonders bevorzugt gegen eine Proteinregion von Nedd4-2 mit der Sequenz der potentiellen Phosphorylierungsstelle für die hsgkl, der Konsensus-Sequenz (R X R X X S/T), gerichtet. Insbesondere sind diese Antikörper gegen solche Nedd4-2-Protein- Regionen gerichtet, die mindestens eine der beiden potentiellen Phosphorylierungsstellen Serin an Aminosäure-Position 382 und/oder Serin an Aminosäure-Position 468 umfassen.The abovementioned antibodies for diagnosing a predisposition to the formation of the Long-Q / T syndrome are therefore preferably directed against the substrate Nedd4-2 and particularly preferably against a protein region of Nedd4-2 with the sequence of the potential phosphorylation site for the hsgkl, the consensus Sequence (RXRXXS / T). In particular, these antibodies are directed against those Nedd4-2 protein regions which comprise at least one of the two potential phosphorylation sites serine at amino acid position 382 and / or serine at amino acid position 468.
Ein weiterer Gegenstand der Erfindung ist ein Kit zur Diagnose des Long-QT-Syndroms oder anderer Erkrankungen, die sich in einer Verlängerung der Q/T-Zeit äußern. Dieser Kit zur Diagnose des Long-QT-Syndroms enthält vorzugsweise Antikörper, die gegen die humanen Homologen der sgk-Protein-Familie gerichtet sind, oder insbesondereAnother object of the invention is a kit for the diagnosis of Long-QT syndrome or other diseases which manifest themselves in an extension of the Q / T time. This kit for the diagnosis of Long-QT syndrome preferably contains antibodies, or in particular, directed against the human homologs of the sgk protein family
Nukleinsäuren, die mit den humanen Homologen der sgk-Gen-Familie unter stringentenNucleic acids that are stringent with the human homologs of the sgk gene family
Bedingungen hybridisieren können. Der Kit kann auch Antikörper, die gegen die humanen Homologen der sgk-Protein-Familie gerichtet sind, und Nukleinsäuren, die mit den humanen Homologen der sgk-Gen-Familie unter stringenten Bedingungen hybridisieren, gemeinsam enthalten. Besonders bevorzugt kann der erfindungsgemäße Kit zur Diagnose des Long-Q/T-Syndroms auch Antikörper, die gegen das hsgkl -Protein gerichtet sind, oderConditions can hybridize. The kit can also contain antibodies that are directed against the human homologs of the sgk protein family and nucleic acids that hybridize with the human homologues of the sgk gene family under stringent conditions. Particularly preferably, the kit according to the invention for diagnosing Long-Q / T syndrome can also be antibodies which are directed against the hsgkl protein, or
Nukleinsäuren, die mit dem hsgkl -Gen unter stringenten Bedingungen hybridisieren können, enthalten. Unter einer Hybridisierung unter stringenten Bedingungen wird in diesem Zusammenhang eine Hybridisierung unter solchen Hybridisierungsbedingungen bezüglich Hybridisierungstemperatur und Formamid-Gehalt der Hybridisierungslösung verstanden, wie sie in einschlägiger Fachliteratur (Sambrook-J and Russell-DW (2001) Cold Spring Harbor, NY, CSHL Press) beschrieben wurde.Contain nucleic acids that can hybridize with the hsgkl gene under stringent conditions. In this context, hybridization under stringent conditions is understood to mean hybridization under such hybridization conditions with regard to the hybridization temperature and formamide content of the hybridization solution as is described in the relevant specialist literature (Sambrook-J and Russell-DW (2001) Cold Spring Harbor, NY, CSHL Press) has been described.
Insbesondere kann der Diagnose-Kit solche einzel- oder doppelsträngigen Nukleinsäuren als Hybridisierungssonden enthalten, die eine Sequenz nach SEQ ID No. 1 oder 2 besitzen, die mindestens 10 Nukleotiden/Basenpaaren lang sind und die den Polymorphismus an Position 732/733 in Intron 2 des hsgkl-Gens entweder mit oder ohne die Insertion des Nukleotids G umfassen.In particular, the diagnostic kit can contain single or double-stranded nucleic acids as hybridization probes that have a sequence according to SEQ ID No. Have 1 or 2 which are at least 10 nucleotides / base pairs long and which comprise the polymorphism at position 732/733 in intron 2 of the hsgkl gene either with or without the insertion of the nucleotide G.
Bei dem erfindungsgemäßen diagnostischen Kit werden insbesondere solche Antikörper bereitgestellt, die spezifisch gegen solche Regionen des hsgkl -Proteins gerichtet sind, deren Präsens im hsgkl -Protein von der Gegenwart der G-Insertion an Position 732/733 in Intron 2 des hsgkl-Gens abhängt. Inbesondere solche Regionen, die aufgrund der An- oder Abwesenheit dieser G-Insertion in der unreifen mRNA alternativ herausgespleißt werden und daher nicht in der reifen mRNA und in dem daraus hervorgehenden Protein vorhanden sind, eignen sich als immunogene Epitope, gegen die diagnostische Antikörper gerichtet sein können. Entsprechend eignen sich auch gerade solche Nukleinsäure-Regionen des hsgkl-Gens als diagnostische Hybridisierungssonden, die mit einer solchen in Abhängigkeit von der G-Insertion an Position 732/733 herausgespleißten Gen-Region hybridisieren können.In the diagnostic kit according to the invention, in particular those antibodies are provided which are specifically directed against regions of the hsgkl protein whose presence in the hsgkl protein depends on the presence of the G insertion at position 732/733 in intron 2 of the hsgkl gene. In particular, regions which are alternatively spliced out in the immature mRNA due to the presence or absence of this G insertion and therefore are not present in the mature mRNA and in the protein resulting therefrom, are suitable as immunogenic epitopes against which diagnostic antibodies are directed can. Accordingly, nucleic acid regions of the hsgkl gene are also particularly suitable as diagnostic hybridization probes which can hybridize with such a gene region spliced out at position 732/733 depending on the G insertion.
Der Kit zur Diagnose des Long-Q/T-Syndroms kann vorzugsweise auch solche Nuklemsäurefragmente als spezifische Hybridisierungssonden enthalten, die die bekannten SNPs im hsgkl -Gen, insbesondere den SNP in Exon 8 (C2617T, D240D), den SNP in Intron 6 (T2071C) und/oder den SNP in Intron 2 an Position 732/733 (Insertion von G), umfassen.The kit for diagnosing Long-Q / T syndrome can preferably also contain such nucleic acid fragments as specific hybridization probes that the known SNPs in the hsgkl gene, in particular the SNP in exon 8 (C2617T, D240D), the SNP in intron 6 (T2071C ) and / or the SNP in intron 2 at position 732/733 (insertion of G).
Die im Rahmen der Erfindung nachgewiesene Korrelation zwischen der genetischen Ausstattung der Gene der hsgkl -Genfamilie und der Länge der Q/T-Zeit ermöglicht auch eine therapeutische Nutzung von funktionalen Aktivatoren oder positiven Transkriptionsregulatoren der sgk-Familie zur Behandlung des Long-Q/T-Syndroms und ähnlicher Erkrankungen, die ebenfalls mit einer verlängerten Q/T-Zeit einhergehen. Hierbei ist unter einem „funktionalen Aktivator" eine Substanz zu verstehen, die die physiologische Funktion der entsprechenden Kinase der sgk-Familie aktiviert. Unter einem „positiven Transkriptionsregulator" ist eine Substanz zu verstehen, die die Expression der entsprechenden Kinase der sgk-Familie aktiviert.The correlation demonstrated in the context of the invention between the genetic makeup of the genes of the hsgkl gene family and the length of the Q / T time also enables a therapeutic use of functional activators or positive ones Transcription regulators of the sgk family for the treatment of Long-Q / T syndrome and similar diseases, which are also associated with an extended Q / T time. Here, a “functional activator” is to be understood as a substance that activates the physiological function of the corresponding kinase of the sgk family. A “positive transcription regulator” is to be understood as a substance that activates the expression of the corresponding kinase of the sgk family.
Ein weiterer Gegenstand der Erfindung betrifft somit die Verwendung eines funktionalen Aktivators oder eines positiven Transkriptionsregulators eines humanen Homologen der sgk-Familie, insbesondere der hsgkl, zur Erniedrigung der Q/T-Zeit und insbesondere zur Therapie und/oder Prophylaxe des Long-QT-Syndroms. Bekannte funktionale Aktivatoren • und/oder positive Transkriptionsregulatoren der humanen humanen Homologen der sgk- Familie, insbesondere der hsgkl, stellen Glucocorticoide, Mineral corticoide, Aldosteron, Gonadotropine, sowie eine Reihe von Cytokinen, insbesondere TGF-ß, dar.Another object of the invention thus relates to the use of a functional activator or a positive transcription regulator of a human homologue of the sgk family, in particular the hsgkl, for lowering the Q / T time and in particular for the therapy and / or prophylaxis of the Long-QT syndrome , Known functional activators and / or positive transcription regulators of the human human homologues of the sgk family, in particular the hsgkl, are glucocorticoids, mineral corticoids, aldosterone, gonadotropins, and a number of cytokines, in particular TGF-ß.
Die Erfindung betrifft daher weiterhin die Verwendung von Substanzen ausgewählt aus der Gruppe von Substanzen bestehend aus Glucocorticoiden, Mineralcorticoiden, Aldosteron, Gonadotropinen und Cytokinen, insbesondere TGF-ß, zur Herstellung eines Arzneimittels zur Therapie und/oder zur Prophylaxe des Long-QT-Syndroms. Die Erfindung betrifft weiterhin ein Arzneimittel enthaltend eine Substanz ausgewählt aus der oben genannten Gruppe von Substanzen zur Therapie und/oder zur Prophylaxe des Long-Q/T-Syndroms.The invention therefore further relates to the use of substances selected from the group consisting of glucocorticoids, mineral corticoids, aldosterone, gonadotropins and cytokines, in particular TGF-β, for the manufacture of a medicament for the therapy and / or prophylaxis of Long-QT syndrome. The invention further relates to a medicament containing a substance selected from the group of substances mentioned above for the therapy and / or prophylaxis of the Long-Q / T syndrome.
Durch die nachfolgenden Beispiele wird die vorliegende Erfindung im Detail erläutert.The present invention is explained in detail by the following examples.
Beispiel 1example 1
Im Rahmen der vorliegenden Erfindung wurde eine Korrelationsstudie durchgeführt, in der der Genotyp des hsgkl-Gens verschiedener Patienten (Zwillinge) mit den an ihnen gemessenen systolischen und diastolischen Blutdruckwerten verglichen und statistisch ausgewertet wurde.In the context of the present invention, a correlation study was carried out in which the genotype of the hsgkl gene of different patients (twins) was compared with the systolic and diastolic blood pressure values measured on them and statistically evaluated.
Es wurden 75 zweieigige Zwillingspärchen zur Korrelationsanalyse herangezogen (Busjahn et al., J Hypertens 1996, 14: 1195-1199; Busjahn et al, Hypertension 1997, 29:75 pairs of twins were used for correlation analysis (Busjahn et al., J Hypertens 1996, 14: 1195-1199; Busjahn et al, Hypertension 1997, 29:
165-170). Die Versuchspersonen waren alle Angehörige der deutsch-kaukasischen Rasse und stammten aus verschiedenen Teilen Deutschlands. Zur Verifikation der Zweieigigkeit und für weitere molekulargenetische Analysen wurde den Zwillingspärchen, sowie deren Eltern Blut entnommen. Jede teilnehmende Versuchsperson wurde zuvor ärztlich untersucht. Für keine der Versuchspersonen war eine chronisch-medizinische Erkrankung bekannt. Nach 5 min wurde der Blutdruck des Probanden in sitzender Position von einen ausgebildeten Arzt mit einem standardisierten Quecksilber-Sphygmomanometer gemessen (2 Messungen mit einem zeitlichen Intervall von 1 min). Der Mittelwert aus den beiden Messungen wurde als Blutdruckwert verwendet.165-170). The test subjects were all members of the German-Caucasian breed and came from different parts of Germany. Blood was taken from the twins and their parents for verification of the bipolar structure and for further molecular genetic analyzes. Each participating subject was previously examined by a doctor. No chronic medical illness was known to any of the test subjects. After 5 min, the blood pressure of the test person in the sitting position was measured by a trained doctor using a standardized mercury sphygmomanometer (2 measurements with a time interval of 1 min). The mean of the two measurements was used as the blood pressure value.
Der Vorteil von zweieigigen Zwillingen für Korrelationsstudien liegt darin, daß sie im Alter übereinstimmen und daß die äußeren Einflüsse auf ihre Phenotypen als minimal einzuschätzen sind (Martin et al., Nat Genet 1997, 17: 387-392).The advantage of dizygot twins for correlation studies is that they match in age and that the external influences on their phenotypes can be considered minimal (Martin et al., Nat Genet 1997, 17: 387-392).
Die Bedeutung von Zwillingsstudien bei der Aufklärung komplexer genetischer Krankheiten wurde kürzlich von Martin et al., 1997 beschrieben.The importance of twin studies in elucidating complex genetic diseases was recently described by Martin et al., 1997.
Die Zweieigigkeit der Zwillingspärchen wurde durch die Amplifikation von fünf Mikrosatelliten-Markern mit Hilfe der Polymerase Kettenreaktion (PCR) bestätigt. Bei dieser Analyse von Mikrosatelliten-Markem werden Desoxyribonucleinsäure (DNA) - Fragmente mit Hilfe spezifischer Oligonukleotide durch PCR amplifiziert, die bei verschiedenen menschlichen Individuen hochvariable Regionen beinhalten. Die hohe Variabilität in diesen Regionen des Genoms kann durch geringfügige Größenunterschiede der amplifizierten Fragmente detektiert werden, wodurch sich bei einer Diversität am entsprechenden Genort Doppelbanden, sogenannte Mikrosatelliten-Banden, nach gelelektrophoretischer Auftrennung der PCR-Produkte bilden (Becker et al., J. Reproductive Med 1997, 42: 260-266).The twinnedness of the twin pairs was confirmed by the amplification of five microsatellite markers using the polymerase chain reaction (PCR). In this analysis of microsatellite markers, deoxyribonucleic acid (DNA) fragments are amplified by means of specific oligonucleotides by PCR, which contain highly variable regions in different human individuals. The high variability in these regions of the genome can be detected by slight differences in the size of the amplified fragments, as a result of which double bands, so-called microsatellite bands, form after diversity at the corresponding locus after gel-electrophoretic separation of the PCR products (Becker et al., J. Reproductive Med 1997, 42: 260-266).
Für die molekulargenetische Analyse des Zielgens, hier des hsgkl-Gens, wurden drei weitere Mikrosatelliten-Marker Regionen (d6s472, d6sl038, d6s270) in unmittelbarer Nähe des hsgkl -Locus durch PCR amplifiziert und anschließend mit den entsprechenden Proben des anderen Zwillings und der Eltern verglichen. Auf diese Weise konnte entschieden werden, ob die Zwillinge von ihren Eltern identische oder unterschiedliche Allele bezüglich des untersuchten Allels geerbt hatten. Die Korrelationsanalyse wurde mit Hilfe des sogenannten "structural equation modeling" (SEM) Modells durchgeführt (Eaves et al., Behav Genet 1996, 26: 519-525; Neale, 1997: Mx: Statistical modeling. Box 126 MCV, Richmond, VA 23298: Department of Psychiatry. 4Λ edition). Dieses Modell basiert auf Varianz-Kovarianz Matrizen der Test-Paare, die durch die Wahrscheinlichkeit, daß sie entweder keines, eines oder zwei identische Allele besitzen, charakterisiert sind. Die Varianz bezüglich des Phänotyps wurde aufgeteilt in eine Varianz, die auf dem genetischen Hintergrund aller Gene (A), eine Varianz, die auf dem genetischen Hintergrund des Zielgens (Q), hier des hsgkl-Gens, und der Varianz aufgrund äußerer Einflüsse (E) beruht.For the molecular genetic analysis of the target gene, here the hsgkl gene, three further microsatellite marker regions (d6s472, d6sl038, d6s270) in the immediate vicinity of the hsgkl locus were amplified by PCR and then compared with the corresponding samples from the other twin and the parents , In this way it was possible to decide whether the twins had inherited identical or different alleles from their parents with regard to the allele examined. The correlation analysis was carried out using the so-called "structural equation modeling" (SEM) model (Eaves et al., Behav Genet 1996, 26: 519-525; Neale, 1997: Mx: Statistical modeling. Box 126 MCV, Richmond, VA 23298 : Department of Psychiatry. 4 Λ edition). This model is based on variance-covariance matrices of the test pairs by the probability of them either none, one or two identical alleles are characterized. The variance regarding the phenotype was divided into a variance based on the genetic background of all genes (A), a variance based on the genetic background of the target gene (Q), here the hsgkl gene, and the variance due to external influences (E ) is based.
VAR = A2+Q2+E2 VAR = A 2 + Q 2 + E 2
Für die drei möglichen Allelkombinationen IBDo, IBDi, IBD (IBD = "identical by descent"; 0, 1 oder 2 identische Allele) wurde die Kovarianz eines Test-Paares wie folgt definiert:The covariance of a test pair was defined as follows for the three possible allele combinations IBDo, IBDi, IBD (IBD = "identical by descent"; 0, 1 or 2 identical alleles):
COV(IBD0)= 0,5 A2 COV(IBDι)= 0,5 A2+0,5 Q2 COV(IBD2)= 0,5 A2 +Q2 COV (IBD 0 ) = 0.5 A 2 COV (IBDι) = 0.5 A 2 +0.5 Q 2 COV (IBD 2 ) = 0.5 A 2 + Q 2
Um die Korrelation zwischen der genetischen Ausstattung des hsgkl-Locus und dem Blutdruck des Probanden abzuschätzen, wurden die Differenzen zwischen Modellen, die die genetische Varianz bezüglich des Zielgens hsgkl berücksichtigen bzw. nicht berücksichtigen, als χ2-Statistik berechnet. Für jedes Paar und jeden Genlocus wurden die Allelenverhältnisse durch das sogenannte "multipoint" Modell (MAPMAKER/SIBS; Kruglyak et al., Am J Hum Genet 1995, 57: 439-454) basierend auf den elterlichen Genotypen errechnet.In order to estimate the correlation between the genetic makeup of the hsgkl locus and the subject's blood pressure, the differences between models that take the genetic variance with respect to the target gene hsgkl into account or not take it into account were calculated as χ 2 statistics. The allele ratios for each pair and each locus were calculated using the so-called "multipoint" model (MAPMAKER / SIBS; Kruglyak et al., Am J Hum Genet 1995, 57: 439-454) based on the parental genotypes.
Die höhere Aussagekraft der Analysemethode, die auf einer Varianz-Kovarianz Abschätzung beruht, im Vergleich zur oben beschriebenen χ2-Statistik (S.A.G.E. Statistical Analysis for Genetic Epidemiology, Release 2.2. Computer program package, Department of Epidemiology and Biostatistics, Gase Western Reserve University, Cleveland, OH, USA, 1996) wurde kürzlich in einer Simulationsstudie bestätigt (Fulker et al., Behav Gen 1996, 26: 527-532). Es wurde eine Irrtumswahrscheinlichkeit p < 0,01 akzeptiert, um eine signifikante Korrelation bezüglich der Kriterien von Lander und Kruglyak zu gewährleisten (Lander et al., Nat Genet 1995, 11 : 241-246).The greater significance of the analysis method, which is based on a variance-covariance estimate, in comparison to the χ 2 statistics described above (SAGE Statistical Analysis for Genetic Epidemiology, Release 2.2. Computer program package, Department of Epidemiology and Biostatistics, Gase Western Reserve University, Cleveland, OH, USA, 1996) was recently confirmed in a simulation study (Fulker et al., Behav Gen 1996, 26: 527-532). An error probability p <0.01 was accepted in order to ensure a significant correlation with regard to the criteria of Lander and Kruglyak (Lander et al., Nat Genet 1995, 11: 241-246).
Die Ergebnisse dieser Korrelationsstudie zeigt Tabelle 1. Tabelle 1:The results of this correlation study are shown in Table 1. Table 1:
Wie aus der Tabelle 1 ersichtlich, beweisen die niedrigen Werte für die ermittelten Irrtumswahrscheinlichkeiten p, die die akzeptierte Irrtumswahrscheinlichkeit von p < 0,01 nicht oder nur geringfügig überschreiten, die direkte Korrelation zwischen der genetischen Varianz bezüglich des hsgkl -Genorts und der phenotypisch ermittelten Varianz des gemessenen Blutdrucks.As can be seen from Table 1, the low values for the error probabilities p determined, which do not or only slightly exceed the accepted error probability of p <0.01, prove the direct correlation between the genetic variance with regard to the hsgkl locus and the phenotypically determined variance the measured blood pressure.
Beispiel 2Example 2
Die genomische Organisation des hsgk 1-Gens wurde bereits beschrieben (Waldegger et al, Genomics,51,299[1998]), http://www.ensembl.org/Ηomo_sapiens/geneview?gene= ENSG00000118515).The genomic organization of the hsgk 1 gene has already been described (Waldegger et al, Genomics, 51,299 [1998]), http://www.ensembl.org/Ηomo_sapiens/geneview?gene= ENSG00000118515).
Zur Identifizierung von SNPs, deren Auftreten für eine Prädisposition zur Ausbildung einer Hypertonie relevant sind, wurden zunächst die in Datenbanken publizierten SNPs im hsgkl -Gen danach untersucht, ob es sich um echte SNPs - und nicht um reine Sequenzierfehler - handelt und ob die SNPs ausreichend polymorph sind, um die Basis für einen diagnostischen Nachweis einer Prädisposition zur Hypertonie zu stellen. Auf diese Art waren bereits der SNP rs 1057293 in Exon 8, der einen Austausch eines C in ein T betrifft, (http://www.ensembl.org/Homo_sapiens/snpview? snp=l 057293; http://www.ncbi. nlm.nih.gov/SNP/snp_ref. cgi?type=rs&rs=l 057293) und ein zweiter SNP, der im hsgkl - Gen exakt 551 bp vom ersten SNP entfernt in der Donor- Spleißstelle des Introns 6 zu Exon 7 lokalisiert ist und der den Austausch eines T in ein C betrifft, lokalisiert worden.In order to identify SNPs whose occurrence is relevant for a predisposition to the development of hypertension, the SNPs in the hsgkl gene published in databases were first examined to determine whether they were real SNPs - and not pure sequencing errors - and whether the SNPs were sufficient are polymorphic to provide the basis for diagnostic evidence of a predisposition to hypertension. In this way, the SNP rs 1057293 was already in exon 8, which concerns an exchange of a C into a T, (http://www.ensembl.org/Homo_sapiens/snpview? Snp = l 057293; http: //www.ncbi . nlm.nih.gov/SNP/snp_ref. cgi? type = rs & rs = l 057293) and a second SNP, which is located in the hsgkl gene exactly 551 bp from the first SNP in the donor splice site of intron 6 to exon 7 and which concerns the exchange of a T into a C.
Beispiel 3Example 3
Von einer Stichprobe der 75 Zwillingspärchen wurden Blutproben entnommen. Nach einer Amplifikation der genomischen DNA des hsgkl-Gens aus den Blutproben mittels PCR wurden die Exons und Introns (nicht jedoch der Promotor-Bereich) des hsgkl-Gens direkt und vollständig mit Hilfe geeigneter Sequenzierprimer durchsequenziert. Bei einem Sequenzvergleich der hsgkl -Gene, die aus verschiedenen Probanden stammten, fiel ein weiterer Polymorphismus in Intron 2 auf, bestehend aus der Insertion eines zusätzlichen Nukleotids G in der Position 732/733. Die An- bzw. Abwesenheit dieser G-Insertion an Position 732/733 in den hsgkl-Genen der einzelnen Probanden zeigte zudem eine signifikante Korrelation zu dem Blutdruck, der bei den einzelnen Probanden gemessen wurde: InsG/InsG-Genotypen zeigten im Mittel signifikant niedrigere systolische und diastolische Blutdruckwerte als die selteneren WT/WT-Genotypen und auch als heterozygote WT/InsG-Genotypen (siehe Tabelle 3). Im Gegensatz dazu zeigten andere Polymorphismus im hsgkl -Gen eine weniger signifikante Korrelation zum gemessenen Blutdruck (z.B. Intron 6 (C2071T) und Exon 8 (T2617C, D240D)) bzw. keinerlei Korrelation zum gemessenen Blutdruck (z.B. Intron 3 Position Ins 13+xT, T1300-1312 und Intron 4 (C 145 IT) und Intron 7 Position 2544delA), wie Tabelle 2 zeigt.Blood samples were taken from a sample of the 75 pairs of twins. After amplification of the genomic DNA of the hsgkl gene from the blood samples by means of PCR the exons and introns (but not the promoter region) of the hsgkl gene were sequenced directly and completely using suitable sequencing primers. In a sequence comparison of the hsgkl genes, which originated from different subjects, a further polymorphism in intron 2 was noticed, consisting of the insertion of an additional nucleotide G in position 732/733. The presence or absence of this G insertion at position 732/733 in the hsgkl genes of the individual test subjects also showed a significant correlation to the blood pressure measured in the individual test subjects: InsG / InsG genotypes showed significantly lower mean values systolic and diastolic blood pressure values as the rarer WT / WT genotypes and also as heterozygous WT / InsG genotypes (see Table 3). In contrast, other polymorphisms in the hsgkl gene showed a less significant correlation to the measured blood pressure (e.g. intron 6 (C2071T) and exon 8 (T2617C, D240D)) or no correlation to the measured blood pressure (e.g. intron 3 position Ins 13 + xT, T1300-1312 and Intron 4 (C 145 IT) and Intron 7 position 2544delA), as Table 2 shows.
Auch die an den Probanden ebenfalls gemessenen EKG-Meßwerte zeigten eine deutliche Korrelation der für die einzelnen Probanden bestimmten Q/T-Zeiten mit dem Genotyp der Probanden bezüglich des Polymorphismus in Intron 2 an Position 732/733 des hsgkl- Gens: hierbei zeigten Probanden mit dem selteneren WT/WT-Genotyp deutlich kürzere Q/T-Zeiten als heterozygote WT/InsG-Probanden und diese wiederum signifikant kürzere Q/T-Zeiten als Probanden mit dem häufigeren InsG/InsG-Genotyp (siehe Tabelle 3). Längere Q/T-Zeiten erhöhen die Gefahr, an Herz-Rhythmus- Störungen, wie insbesondere dem Long-Q/T-Syndrom, zu erkranken. Somit ergeben sich umgekehrte Korrelationen zwischen dem Genotyp des Polymorphismus in Intron 2 an Position 732/733 des hsgkl - Gens mit einer Prädisposition für das Long-Q/T-Syndrom auf der einen Seite und mit einer Prädisposition für die Hypertonie auf der anderen Seite. Diese Korrelationen können jeweils für die Diagnose, Therapie und Prophylaxe der Hypertonie und des Long-Q/T- Syndroms genutzt werden.The ECG measurement values also measured on the test subjects also showed a clear correlation of the Q / T times determined for the individual test subjects with the genotype of the test subjects with regard to the polymorphism in intron 2 at position 732/733 of the hsgkl gene: test subjects showed this the rarer WT / WT genotype significantly shorter Q / T times than heterozygous WT / InsG subjects and these in turn significantly shorter Q / T times than subjects with the more common InsG / InsG genotype (see Table 3). Longer Q / T times increase the risk of developing cardiac arrhythmias, in particular the Long Q / T syndrome. This leads to reverse correlations between the genotype of the polymorphism in intron 2 at position 732/733 of the hsgkl gene with a predisposition for Long-Q / T syndrome on the one hand and with a predisposition for hypertension on the other hand. These correlations can be used for the diagnosis, therapy and prophylaxis of hypertension and Long-Q / T syndrome.
Tabelle 2:Table 2:
Intron 2 Intron 3 Intron 4 Intron 6 lntron7 Exon 8Intron 2 Intron 3 Intron 4 Intron 6 Intron7 Exon 8
SNP/SNP /
Position Position C1451T C2071T Position delA T2617C, DNA Nr. InsG lns13+xT 2544delA D240D Position Position C1451T C2071T Position delA T2617C, DNA No. InsG lns13 + xT 2544delA D240D
Tabelle 3:Table 3:

Claims

Patentansprüche claims
1. Verwendung einer isolierten einzel- oder doppelsträngigen Nukleinsäure enthaltend ein Fragment der Nukleinsäuresequenz nach SEQ ID No. 1 oder nach SEQ ID No. 2 zur Diagnose von Hypertonie, dadurch gekennzeichnet, daß das besagte Fragment mindestens 10 Nukleotide/Basenpaare lang ist und daß das besagte Fragment den Polymorphismus in Intron 2 des hsgkl-Gens entweder mit oder ohne die Insertion des Nukleotids G an Position 732/733 umfaßt.1. Use of an isolated single- or double-stranded nucleic acid containing a fragment of the nucleic acid sequence according to SEQ ID No. 1 or according to SEQ ID No. 2 for the diagnosis of hypertension, characterized in that said fragment is at least 10 nucleotides / base pairs long and that said fragment comprises the polymorphism in intron 2 of the hsgkl gene either with or without the insertion of nucleotide G at position 732/733.
2. Kit zur quantitativen Diagnose von Hypertonie, enthaltend mindestens eine isolierte einzel- oder doppelsträngige Nukleinsäure wie in Anspruch 1 definiert.2. Kit for the quantitative diagnosis of hypertension, comprising at least one isolated single- or double-stranded nucleic acid as defined in claim 1.
3. Kit zur quantitativen Diagnose von Hypertonie, enthaltend mindestens einen Antikörper gegen eine Region des hsgk-Proteins, dadurch gekennzeichnet, daß die Präsens besagter Region im hsgkl -Protein von der Gegenwart einer Insertion des3. Kit for the quantitative diagnosis of hypertension, containing at least one antibody against a region of the hsgk protein, characterized in that the presence of said region in the hsgkl protein from the presence of an insertion of
Nukleotids G an Position 732/733 in Intron 2 des kodierenden hsgk-Gens abhängig ist.Nucleotide G at position 732/733 in intron 2 of the coding hsgk gene is dependent.
4. Verfahren zur Diagnose der Hypertonie umfassend die folgenden Verfahrensschritte: a) Entnahme einer Körperprobe, b) gegebenenfalls Isolierung und/oder Amplifizierung von genomischer DNA, cDNA oder mRNA aus der Körperprobe nach a), c) Quantifizierung der Allele, die eine Insertion des Nukleotides G an der Position 732/733 in Intron 2 des hsgkl -Gens besitzen.4. A method for diagnosing hypertension comprising the following process steps: a) taking a body sample, b) optionally isolating and / or amplifying genomic DNA, cDNA or mRNA from the body sample after a), c) quantifying the alleles that are required to insert the Have nucleotides G at position 732/733 in intron 2 of the hsgkl gene.
5. Verfahren nach Anspruch 4, dadurch gekennzeichnet, daß die Körperprobe aus Schritt a) ausgewählt ist aus der Gruppe bestehend aus Blut, Speichel, Gewebe, Zellen.5. The method according to claim 4, characterized in that the body sample from step a) is selected from the group consisting of blood, saliva, tissue, cells.
Verfahren nach Anspruch 4 oder 5, dadurch gekennzeichnet, daß die Quantifizierung der Allele nach Schritt c) durch direkte Sequenzierung der genomischen DNA oder der cDNA, die aus der Körperprobe isoliert wurde, erfolgt. Method according to Claim 4 or 5, characterized in that the alleles are quantified after step c) by direct sequencing of the genomic DNA or the cDNA which has been isolated from the body sample.
7. Verfahren nach Anspruch 4 bis 6, dadurch gekennzeichnet, daß die Quantifizierung der Allele nach Schritt c) durch spezifische Hybridisierung der genomischen DNA oder der cDNA, die aus der Körperprobe isoliert wurde, erfolgt.7. The method according to claim 4 to 6, characterized in that the quantification of the alleles after step c) by specific hybridization of the genomic DNA or the cDNA, which was isolated from the body sample, takes place.
8. Verfahren nach Anspruch 4 bis 7, dadurch gekennzeichnet, daß die Quantifizierung der Allele nach Schritt c) durch einen PCR-Oligo-Elongations-Assay oder einen Ligations-Assay erfolgt.8. The method according to claim 4 to 7, characterized in that the quantification of the alleles after step c) is carried out by a PCR-oligo elongation assay or a ligation assay.
9. Verwendung der direkten Korrelation zwischen der Überexpression oder der funktionalen molekularen Modifikation von humanen Homologen der sgk-Familie und der Länge der Q/T-Zeit zur Diagnose des Long-QT-Syndroms.9. Using the direct correlation between the overexpression or the functional molecular modification of human homologs of the sgk family and the length of the Q / T time to diagnose the Long-QT syndrome.
10. Verwendung der einzel- oder doppelsträngigen Nukleinsäure umfassend die Sequenz eines humanen Homologen der sgk-Familie oder eines seiner Fragmente mit einer Länge von mindestens 10 Nukleotiden/Basenpaaren zur Diagnose des10. Use of the single- or double-stranded nucleic acid comprising the sequence of a human homologue of the sgk family or one of its fragments with a length of at least 10 nucleotides / base pairs for the diagnosis of
Long-QT- S yndroms .Long QT syndromes.
11. Verwendung nach Anspruch 9 oder 10, dadurch gekennzeichnet, daß das humane Homologe der sgk-Familie das hsgkl -Gen ist.11. Use according to claim 9 or 10, characterized in that the human homologue of the sgk family is the hsgkl gene.
12. Verwendung nach Anspruch 11, dadurch gekennzeichnet, daß die Nukleinsäure das hsgkl -Gen oder eines seiner Fragmente eine Länge von mindestens 10 Nukleotiden/Basenpaaren besitzt und daß besagte Nukleinsäure den Polymorphismus an Position 732/733 in Intron 2 des hsgkl-Gens entweder mit oder ohne die Insertion des Nukleotids G umfaßt.12. Use according to claim 11, characterized in that the nucleic acid of the hsgkl gene or one of its fragments has a length of at least 10 nucleotides / base pairs and that said nucleic acid either has the polymorphism at position 732/733 in intron 2 of the hsgkl gene or without the insertion of nucleotide G.
13. Verwendung eines Antikörpers gegen ein Substrat eines humanen Homologen der sgk-Familie zur Diagnose einer Prädisposition zur Ausbildung des Long-Q/T- Syndroms, wobei der Antikörper gegen ein solches Epitop des humanen Homologen gerichtet ist, welches die Phosphorylierungsstelle entweder in phosphorylierter Form oder in nicht phosphorylierter Form enthält.13. Use of an antibody against a substrate of a human homologue of the sgk family for the diagnosis of a predisposition to the development of Long-Q / T syndrome, the antibody being directed against such an epitope of the human homologue which the phosphorylation site either in phosphorylated form or contains in non-phosphorylated form.
14. Verwendung nach Anspruch 13, dadurch gekennzeichnet, daß das Substrat des humanen Homologen der sgk-Familie Nedd4-2 mit der Acc No. BAA23711 ist. 14. Use according to claim 13, characterized in that the substrate of the human homologue of the sgk family Nedd4-2 with the Acc No. BAA23711 is.
15. Kit zur Diagnose des Long-QT-Syndroms, enthaltend Antikörper, die gegen die humanen Homologen der sgk-Protein-Familie gerichtet sind, oder Nukleinsäuren, die mit den humanen Homologen der sgk-Gen-Familie unter stringenten Bedingungen hybridisieren können, oder diese Antikörper und Nukleinsäuren gemeinsam.15. Kit for the diagnosis of Long-QT syndrome, containing antibodies which are directed against the human homologues of the sgk protein family or nucleic acids which can hybridize with the human homologues of the sgk gene family under stringent conditions, or these antibodies and nucleic acids together.
16. Kit nach Anspruch 15, dadurch gekennzeichnet, daß das humane Homologe der sgk-Familie das hsgkl -Gen ist.16. Kit according to claim 15, characterized in that the human homologue of the sgk family is the hsgkl gene.
17. Verwendung eines funktionalen Aktivators oder positiven Transkriptionsregulators eines humanen Homologen der sgk-Familie, insbesondere der hsgkl, zur Erniedrigung der Q/T-Zeit.17. Use of a functional activator or positive transcription regulator of a human homologue of the sgk family, in particular the hsgkl, to lower the Q / T time.
18. Verwendung nach Anspruch 17, dadurch gekennzeichnet, daß der funktionale Aktivator oder positive Transkriptionsregulator ausgewählt ist aus der Gruppe bestehend aus Glucocorticoiden, Mmeralcorticoiden, Aldosteron, Gonadotropinen und Cytokinen, insbesondere TGF-ß.18. Use according to claim 17, characterized in that the functional activator or positive transcription regulator is selected from the group consisting of glucocorticoids, marcorticoids, aldosterone, gonadotropins and cytokines, in particular TGF-ß.
19. Verwendung von Substanzen ausgewählt aus der Gruppe bestehend aus Glucocorticoiden, Mmeralcorticoiden, Aldosteron, Gonadotropinen und Cytokinen, insbesondere TGF-ß, zur Herstellung eines Arzneimittels zur Therapie und/oder zur Prophylaxe des Long-QT-Syndroms.19. Use of substances selected from the group consisting of glucocorticoids, mmeralcorticoids, aldosterone, gonadotropins and cytokines, in particular TGF-β, for the manufacture of a medicament for the therapy and / or prophylaxis of the Long-QT syndrome.
20. Arzneimittel enthaltend mindestens eine Substanz aus der Gruppe von Substanzen bestehend aus Glucocorticoiden, Mmeralcorticoiden, Aldosteron, Gonadotropinen und Cytokinen, insbesondere TGF-ß, zur Therapie und/oder zur Prophylaxe des Long-QT-Syndroms. 20. Medicament containing at least one substance from the group of substances consisting of glucocorticoids, marcorticoids, aldosterone, gonadotropins and cytokines, in particular TGF-ß, for the therapy and / or prophylaxis of the Long-QT syndrome.
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AU2004209609A1 (en) 2004-08-19
WO2004070057A2 (en) 2004-08-19
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