Classifications

• • B—PERFORMING OPERATIONS; TRANSPORTING
  • B05—SPRAYING OR ATOMISING IN GENERAL; APPLYING FLUENT MATERIALS TO SURFACES, IN GENERAL
  • B05D—PROCESSES FOR APPLYING FLUENT MATERIALS TO SURFACES, IN GENERAL
  • B05D7/00—Processes, other than flocking, specially adapted for applying liquids or other fluent materials to particular surfaces or for applying particular liquids or other fluent materials
  • B05D7/24—Processes, other than flocking, specially adapted for applying liquids or other fluent materials to particular surfaces or for applying particular liquids or other fluent materials for applying particular liquids or other fluent materials
• • C—CHEMISTRY; METALLURGY
  • C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
  • C08J—WORKING-UP; GENERAL PROCESSES OF COMPOUNDING; AFTER-TREATMENT NOT COVERED BY SUBCLASSES C08B, C08C, C08F, C08G or C08H
  • C08J7/00—Chemical treatment or coating of shaped articles made of macromolecular substances
  • C08J7/12—Chemical modification
  • C08J7/123—Treatment by wave energy or particle radiation
• • B—PERFORMING OPERATIONS; TRANSPORTING
  • B05—SPRAYING OR ATOMISING IN GENERAL; APPLYING FLUENT MATERIALS TO SURFACES, IN GENERAL
  • B05D—PROCESSES FOR APPLYING FLUENT MATERIALS TO SURFACES, IN GENERAL
  • B05D1/00—Processes for applying liquids or other fluent materials
  • B05D1/62—Plasma-deposition of organic layers
• • B—PERFORMING OPERATIONS; TRANSPORTING
  • B05—SPRAYING OR ATOMISING IN GENERAL; APPLYING FLUENT MATERIALS TO SURFACES, IN GENERAL
  • B05D—PROCESSES FOR APPLYING FLUENT MATERIALS TO SURFACES, IN GENERAL
  • B05D7/00—Processes, other than flocking, specially adapted for applying liquids or other fluent materials to particular surfaces or for applying particular liquids or other fluent materials
  • B05D7/02—Processes, other than flocking, specially adapted for applying liquids or other fluent materials to particular surfaces or for applying particular liquids or other fluent materials to macromolecular substances, e.g. rubber
• • C—CHEMISTRY; METALLURGY
  • C03—GLASS; MINERAL OR SLAG WOOL
  • C03C—CHEMICAL COMPOSITION OF GLASSES, GLAZES OR VITREOUS ENAMELS; SURFACE TREATMENT OF GLASS; SURFACE TREATMENT OF FIBRES OR FILAMENTS MADE FROM GLASS, MINERALS OR SLAGS; JOINING GLASS TO GLASS OR OTHER MATERIALS
  • C03C17/00—Surface treatment of glass, not in the form of fibres or filaments, by coating
  • C03C17/28—Surface treatment of glass, not in the form of fibres or filaments, by coating with organic material
  • C03C17/32—Surface treatment of glass, not in the form of fibres or filaments, by coating with organic material with synthetic or natural resins
• • C—CHEMISTRY; METALLURGY
  • C03—GLASS; MINERAL OR SLAG WOOL
  • C03C—CHEMICAL COMPOSITION OF GLASSES, GLAZES OR VITREOUS ENAMELS; SURFACE TREATMENT OF GLASS; SURFACE TREATMENT OF FIBRES OR FILAMENTS MADE FROM GLASS, MINERALS OR SLAGS; JOINING GLASS TO GLASS OR OTHER MATERIALS
  • C03C17/00—Surface treatment of glass, not in the form of fibres or filaments, by coating
  • C03C17/34—Surface treatment of glass, not in the form of fibres or filaments, by coating with at least two coatings having different compositions
  • C03C17/3405—Surface treatment of glass, not in the form of fibres or filaments, by coating with at least two coatings having different compositions with at least two coatings of organic materials
• • C—CHEMISTRY; METALLURGY
  • C23—COATING METALLIC MATERIAL; COATING MATERIAL WITH METALLIC MATERIAL; CHEMICAL SURFACE TREATMENT; DIFFUSION TREATMENT OF METALLIC MATERIAL; COATING BY VACUUM EVAPORATION, BY SPUTTERING, BY ION IMPLANTATION OR BY CHEMICAL VAPOUR DEPOSITION, IN GENERAL; INHIBITING CORROSION OF METALLIC MATERIAL OR INCRUSTATION IN GENERAL
  • C23C—COATING METALLIC MATERIAL; COATING MATERIAL WITH METALLIC MATERIAL; SURFACE TREATMENT OF METALLIC MATERIAL BY DIFFUSION INTO THE SURFACE, BY CHEMICAL CONVERSION OR SUBSTITUTION; COATING BY VACUUM EVAPORATION, BY SPUTTERING, BY ION IMPLANTATION OR BY CHEMICAL VAPOUR DEPOSITION, IN GENERAL
  • C23C8/00—Solid state diffusion of only non-metal elements into metallic material surfaces; Chemical surface treatment of metallic material by reaction of the surface with a reactive gas, leaving reaction products of surface material in the coating, e.g. conversion coatings, passivation of metals
  • C23C8/06—Solid state diffusion of only non-metal elements into metallic material surfaces; Chemical surface treatment of metallic material by reaction of the surface with a reactive gas, leaving reaction products of surface material in the coating, e.g. conversion coatings, passivation of metals using gases
  • C23C8/36—Solid state diffusion of only non-metal elements into metallic material surfaces; Chemical surface treatment of metallic material by reaction of the surface with a reactive gas, leaving reaction products of surface material in the coating, e.g. conversion coatings, passivation of metals using gases using ionised gases, e.g. ionitriding

Definitions

• the present invention relates to a method of providing a substrate for immobilising chemical compounds, in particular biomolecules, and analogues and derivatives thereof.
• the substrate carries chemically reactive groups which are capable of reacting with specific chemical groups of biomolecules such as amines, phosphor esters, thiols and hydroxyls.
• the invention also relates to the substrate and use of the substrate.
• biomolecules e.g. proteins, lipids, nucleic acid, whole cells or cell fragments
• substrates on which the chemically reactive groups are capable of reacting with biomolecules without the need for further activation.
• a method of providing a substrate for immobilising chemical compounds such as biomolecules is e.g. described in WO 96/31557 This method-includes an photochemical immobilising. Similar methods are described in US 4,973,493 and US 5,002,582.
• Acid halogenides, acid anhydrides, epoxides, aldehydes, etc. can readily undergo reaction with amine groups (in particular primary amines), and these chemically reactive groups are therefore believed to have particular relevance as chemically reactive groups on substrates intended for immobilisation of biomolecules. To the applicant's best knowledge, it has normally been quite difficult and laborious to prepare such functionalised substrates, in particular on an industrial scale.
• US 6,303,179 discloses a method of providing a substrate with an amine-functional polymer surface by irradiating the surface of a solid polymer material, grafting the irradiated surface with an amide functional ethylenically unsaturated monomer and converting the amide functional group to an amine functional group.
• the objective of the present invention is to provide an alternative method of providing a substrate for immobilising molecules e.g. biomolecules.
• the present invention thus, relates to a novel method of providing functional groups including chemically reactive groups on the surface of a solid substrate by plasma polymerisation, including treatment of the substrate with a monomer gas in a plasma generated by a multiple phase AC supply or a DC supply in order to provide a plasma polymerised layer onto the surface.
• the monomer gas comprises one or more types of monomers which will give rise to the chemically reactive groups on the surface of the solid substrate.
• the present invention relates to a process for coupling a biomolecule or a biomolecule analogue or a derivative thereof to a surface of a solid substrate
• the process may include the steps of functionalising the surface of the substrate using the method defined in the claims so as to provide chemically reactive-groups on the surface of the substrate, and contacting the surface of the substrate with a solution comprising the biomolecule or biomolecule analogues or derivative thereof so as-to allow reaction between the chemically reactive groups of the substrate and the proteins, lipids, cells, cell fractions or nucleic acids or analogues thereof.
• the method of providing a solid substrate for immobilising chemical compounds according to the invention comprises the steps of providing a basis substrate, and treating the surface of the basis substrate with a monomer gas in a plasma.
• Plasma surface modification techniques are generally known in the art.
• US patent 5,876,753 describes a method of applying a fluorocarbon film onto a substrate using an RF plasma polymerisation process.
• a substrate of increased quality is provided.
• the basic solid substrate may in principle be of any kind of materials or combinations of materials e.g. layered or mixed materials.
• the solid substrate essentially consists of a material selected from glass, silicon, paper, carbon fibres, ceramics, metals and polymers, e.g. polyolefins such as polyethylene (PE) and polypropylene (PP), polystyrene (PS), or other thermoplastics such as polytetrafluoroethylene (PTFE), tetra-fluoroethylene- hexafluoropropylen-copolymers (FEP), polyvinyl-difluoride (PVDF), polyamides (e.g.
• nylon-6.6 and nylon-11 and polyvinylchloride (PVC), rubbers e.g. silicon rubbers.
• PVC polyvinylchloride
• Presently preferred materials are polyethylene (PE), polystyrene (PS), silicon, and glass which are well known for use in traditional biochemical applications, and which are compatible with most standardised analytical instrumentation.
• the solid substrate may have any shape e.g. shaped as a strip, a plate, a slide, an Eliza plate, a dipstick, and etc.
• the surface of the substrate or "substrate surface” could be one or more sub surface areas, but it could also include the entire surface of the substrate. It should also be observed that the substrate may comprise different chemically reactive groups or different concentrations of chemically reactive groups on different sub surface areas. Thus parts of the substrate may be totally or partly masked during all or part of the plasma treatment and further the substrate may be subjected to two or more plasma treatments e.g. with different masked sub surface areas. Generally it is preferred that the substrate surface which is subjected to a plasma treatment and thereby is provided with chemically reactive groups includes an area of at least 1 my 2 , preferably at least 10 my 2 , more preferably at least 100 my 2 . In some applications the substrate surface, which is subjected to a plasma treatment and thereby is provided with chemically reactive groups includes an area of between 0.01 - 100 cm 2 or even larger areas.
• the substrate surface may be pre-coated in order to modify the properties thereof, e.g. the ability of the surface to adhere to the plasma polymerised layer, or the hydrophobic properties of the substrate as such.
• the pre-coating may e.g. be performed by plasma polymerisation.
• the pre-coating provides a substantially homogenous layer of a polymer onto the native surface of the substrate.
• the surface may be pre-coated with a plasma polymerised layer of, e.g., polystyrene (see Example 1).
• the chemically reactive groups which are highly desirable within the present invention are such groups which are capable of reacting with biomolecules or biomolecule analogues or derivatives thereof (commonly referred to as "biomolecules" in the following).
• the reaction may preferably result in an ionic or even more preferred a covalent bonding between the chemically reactive group and the chemical compound.
• Biomolecules will often include reactive sites such as amino groups, hydroxy groups, thio groups, phosphor ester groups, etc., or biomolecules can be derivatised so as to include such groups, in particular amines such as primary amines.
• amines of such biomolecules are highly useful for immobilisation to the solid substrates, which can be prepared according to the present invention.
• the chemically reactive groups which are provided on the surface of the solid substrate are preferably groups which can react and thereby bind to a biomolecule, preferably a protein or nucleic acid in a liquid phase reaction not requiring energy input from external sources, e.g., heat, UV-light, electron beam, microwaves, or ultra sound.
• the binding reaction is carried out in aqueous solution, optionally containing pH-buffers, salts, carbodiimides, or other additives known to those skilled in the art of binding of biomolecules, or in an organic solvent, e.g., acetonitrile, tetrahydrofurane, chloroform, di- chloromethane, ethanol, dimethyl formamide, dimethyl sulfoxide, or in a mixture of two or more organic solvents optionally containing additives known to those skilled in the art of binding of biomolecules.
• an organic solvent e.g., acetonitrile, tetrahydrofurane, chloroform, di- chloromethane, ethanol, dimethyl formamide, dimethyl sulfoxide, or in a mixture of two or more organic solvents optionally containing additives known to those skilled in the art of binding of biomolecules.
• Examples of functional chemically reactive groups which are found particularly interesting are those selected from acid anhydrides (in particular carboxylic acid anhydrides), acid halides (in particular carboxylic acid halides) such as acid chlorides, acid bromides, acid fluorides, acid iodides, epoxides, aldehydes, carboxylic acids, thiols, nitriles, primary and secondary amines, and phosphate esters, in particular acid anhydrides, acid halides, epoxides, and aldehydes.
• Especially interesting chemically reactive gro ⁇ ps are acid anhydrides and acid halides (such as acid chioride), and epoxides. These latter groups are particularly suited for reaction with the amine groups of biomolecules (or biomolecule analogues or derivatives thereof).
• biomolecule should be understood in the broadest sense. With no intention to be limiting, examples of biomolecules include proteins, lipids, nucleic acids (such as RNA, DNA, etc), oligonucleotides, oligonucleotide analogues (such as PNA, LNA, etc.), cells, microorganisms, etc. as well as derivatives thereof. Particularly interesting derivatives are those which includes an amine group suitable for coupling to the solid surfaces prepared as described herein. Other particularly interesting groups are thio and phosphate groups.
• the method of the invention includes the step of treating the substrate in a plasma with a monomer gas comprising one or more types of monomers which is plasma polymerised onto the surface to thereby provide the surface of the solid substrate with chemically reactive groups.
• the monomers comprise a polymerisable group in addition to the groups which give rise to the chemically reactive groups on the solid substrate.
• a polymerisable group is typically selected from ethylenically unsaturated groups such as vinyl, propen-1- yl, propen-2-yl, acetylene, etc. and mono-, di-, or tri-substituted aromatic compounds.
• the individual monomers may comprise more than one group which primarily is intended for polymerisation (e.g. acrylic acid anhydride) and more than one group which primarily is intended to give rise to the chemically reactive group (e.g., 1 ,2-di-thiol-benzene).
• Examples of useful monomers are methacrylic acid anhydride, acrylic acid chloride, acrylic acid, methacrylic acid, acrylic acid anhydride, 4-pentenoic anhydride, methacrylic acid chloride, acrolein, methacrolein, 1 ,2-epoxy-5-hexene, glycidylmethacrylate, allylamine, and allylmercaptane.
• Presently preferred monomers are methacrylic acid anhydride, acrylic acid chloride, acrolein, and glycidylmethacrylate.
• the monomer gas may comprise more than one type of functional monomer.
• the selected type of monomer may have a great influence on the surface tension of the functionalised substrate. Acid anhydrides used as monomers will normally render the surface quite hydrophilic whereas acid halogenides will render the surface quite hydrophobic. Very hydrophobic surfaces may make it more difficult to bring an aqueous solution of a biomolecule in contact with the functionalised surface, whereas a very hydrophilic surface will make it difficult to control the accurate spotting of aliquots of an aqueous solution. It may thus be desirable to include a modifying monomer in the monomer gas so as to prepare a copolymer with modified properties, i.e. a copolymer which will provide a surface which is more balanced in relation to the solution in which the biomolecule is provided.
• the modifying monomer may e.g. be a monomer free of chemical groups, which react with biomolecules without further initiation.
• monomers which may be used to adjust the surface tension are monomers being relatively hydrophobic (e.g. perfluorohexene, perfluoromethylpentene, hexene, pentene, propene, ethylene, cyclohexene, acetylene, styrene, xylene, vinylbornene, tetra-methylsilane, hexamethyl-di-silane, etc.) and monomers being relatively hydrophilic (e.g. vinylacetate, vinylpyrolidone, ethyleneglycolvinylether, diethyleneglycolvinylether, methacrylate. methylmethacrylate, allylalcohol, etc.).
• acid anhydrides are advantageously combined with hydrophobic monomers such as hexene or styrene (hydrophobic), whereas acid chlorides (hydrophobic) advantageously are combined with vinyl acetate (hydrophilic).
• the selected type of monomer may also have a great influence on the mechanical strength of the functionalised substrate.
• Monomers whose chemically reactive group makes up the major part of the monomer will normally render the surface mechanically rather weak. It may thus be desirable to include another (non-reactive) monomer in the monomer gas so as to prepare a copolymer with higher mechanical strength.
• acid halides are advantageously combined with strength providing monomers such as hexene, styrene or xylene (hydrophobic) or with vinyl acetate (hydrophilic) or with methyl methacrylate.-. .
• the monomer gas further comprises a second monomer (such as the above hydrophilic, hydrophobic or strength providing monomers) which after plasma polymerisation with the one or more type of monomers gives rise to a co-polymer.
• a second monomer such as the above hydrophilic, hydrophobic or strength providing monomers
• the relative molar ratio between the "chemically reactive" monomer and the hydrophobic/- , hydrophilic strength providing monomer may e.g. be in the range of 1 :1 to 1 :100 mol/mol, when such a second monomer is used.
• the plasma reaction chamber useful in the method of the invention can basically be of any conventional type, which can provide the desired plasma i.e. as defined in the claims.
• An applicable reaction chamber is the one described by the applicant in the earlier WO 00/44207 or those utilising the electrode system described in EP 0 741 404 B1.
• the plasma type advantageously used in the concept of the present invention is one generated by a multiple phase AC supply or a DC supply. It has been found that this type of plasma has a level of intensity, which allows a substantial portion of the chemically reactive groups to be preserved. It is particularly advantageous to utilise a two or three phase AC plasma which offers the possibility of using a sufficiently low energy, e.g. energy levels of at the most 5 W/I such as at the most 3 W/I.
• the intensity of the plasma is at the most 2.0 W/I, e.g. at the ⁇ nost. ⁇ 7. W/I . such a at the most 1.5 W/I, preferably at the most 1.2 W/I, in particular at the. most 1.0 W/I, especially at the most 0.7 W/I. Most preferably the intensity of the plasma is between 0.5 and 2 W/I. It has been shown in the examples that even these surprisingly low plasma intensities provide very useful functionalised substrates.
• the pressure in the reaction chamber will normally be in the range of 10-1000 ⁇ bar, such as 25-500 ⁇ bar or alternatively such as 20-300 ⁇ bar.
• the pressure in the reaction chamber is controlled by a vacuum pump optionally including a gas flow reduction valve, and a supply of the monomer gas and a carrier gas which may be an inert gas or a reactive gas or a mixture thereof.
• the inert carrier gas is suitably a noble gas such as helium, argon, neon, krypton or a mixture thereof.
• the reactive carrier gas may preferably be selected from the group consisting of hydrogen, oxygen, fluor, chloride or mixtures thereof.
• a plasma reaction chamber can be adapted in accordance with the instructions given herein with possible modification obvious for the person skilled in the art.
• the monomer concentration and the total treatment time should preferably be sufficient to provide the basis substrate surface with a plasma polymerised layer, preferably having a thickness of at least about 5 angstroms, such as between 10 and 1000 angstroms or higher.
• the plasma polymerisation process is normally conducted for a period of 1-1000 sec, such as 10-100 sec.
• the plasma polymerised layer typically has a substantially uniform thickness. It is believed that the layer thickness generally is in the range of 5-5000 nm, such as in the range of 1- 1000 or 10-1000 nm, typically 10-200 nm, such as 5-50 nm.
• the method of the invention is applicable for providing surfaces (polymerised layers) where preferably at least 1 mole-%, such as at least 3 mole-%, e.g. at least 5 mole-%, of the chemically reactive groups provided with the monomer gas to the plasma are present at the surface of the substrate i.e. in the polymerised layer.
• a fraction e.g. 5 % or 25 % or more of the chemically reactive groups in the polymerised layer may be available for reaction with biomolecules, whereas other groups may be embedded in the plasma polymerised layer.
• the method of the invention can provide substrates where the density of the chemically reactive groups on the substrate surface which has been treated with plasma is at least 0.001 nmol per cm 2 , such as at least 0.005 nmol per cm 2 , e.g. at least 0.01 nmol per cm 2 . It is envisaged that even higher densities can be obtained if desirable, see, e.g., example 7 where 0.1 nmol/cm 2 of activated group was demonstrated to react with the primary amine of an organic molecule.
• the present invention also provides a substrate obtainable according to the method defined above.
• substrate should preferably comprise plasma polymerised monomers selected from acid anhydrides, acid halides (such as acid chlorides), carboxylic acids, epoxides, aldehydes, and thiols, preferably from acid anhydrides, epoxides, and acid halides, in particular acid anhydrides, epoxides, and acid chlorides.
• Such as substrate preferably has a density of the chemically reactive groups accessible for chemical reaction of at least 0.001 nmol per cm 2 .
• Particularly preferred substrates include
• a substrate comprising epoxy functionalities, wherein the density of the epoxy groups accessible for chemical reaction is at least 0.001 nmol per cm 2 ,
• other molecules e.g. low molecular weight molecules, may also be coupled to the substrates prepared as described herein.
• the substrates may be used to immobilise peptides, amino acids organic spacers, etc.
• a further aspect of the invention relates to a process for immobilising a chemical compound to a surface of a solid substrate, the process comprising the following steps:
• the solution comprising the protein or nucleic acid or analogue thereof does not include a coupling agent, i.e. the reaction between the chemically reactive groups of the substrate and the biomolecule (or biomolecule analogue or derivative thereof) preferably takes place without activation.
• the chemically reactive, groups of the substrate surface need no activation, and that the process therefore does not include such activation step.
• the chemical compound should preferably be selected from the group consisting of biomolecule or a biomolecule analogue or a derivative thereof as defined above.
• the chemical compound is proteins, lipids, nucleic acid, or analogue thereof, or mixtures thereof.
• Such a process may comprise the subsequent step of rinsing the surface of the substrate so as to remove non-reacted biomolecule or biomolecule analogue or derivative, and/or so as to inactivate non-reacted activated chemically reactive groups.
• hydrophobicity When the hydrophobicity is suitable adjusted, it may be possible to present a number (e.g. 10-1000 or even more, of discrete spots of different biomolecules onto the same substrate, e.g. within an area of less than 10 cm 2 .
• a number e.g. 10-1000 or even more, of discrete spots of different biomolecules onto the same substrate, e.g. within an area of less than 10 cm 2 .
• Figure 1 Localisation of spots on a glass slide (examples 4 and 10) for coupling, upper row, and for hybridisation, lower row.
• Figure 2 Coupling of radio-labelled oligo to a slide (examples 4..and 10. Coupling capacities in the range of 0.004-0.012 nmol pr cm 2 was achieved.
• Figure 3 Hybridisation of oligo SGP4 to coupled oligonucleotides as described (example 10).
• Figures 4a and 4b A front view and a side view, respectively of an electrode system, which can be used when carrying out the invention.
• FT-IR Fourier Transform Infrared spectroscopy
• Advancing contact angle with deionised water was 90 deg. to 120 deg. In comparison the value for untreated glass slides was less than 10 deg.
• FT-IR Fourier Transform Infrared Spectroscopy
• FT-IR The presence of poIy(methacrylic acid) was evidenced by absorption peaks in the following bands: 3000 - 2800 cm-1 (Aliphatic C-H), 1720 - 1700 cm-1 (Carboxylic acid), 1451 cm-1 (Aliphatic C-H). Furthermore a broad absorption peak in the band 4000-3000 cm-1 indicates the presence of hydroxyl and/or carboxylic acid.
• Example 3 Polymerisation of Methacrylic acid anhydride (MAAH) 10 polystyrene coated glass slides were placed in a 300 I cylindrical plasma chamber equipped with a three phase electrode system described in EP 0 741 404 B1. Plasma polymerisation of MAAH was carried out in the following way: Ar was bubbled through MAAH at 5 seem, and fed to the chamber, and the polymerisation was carried out at pressure 0.30 mbar, power density 2.7 W/I, andduration 300 seconds.
• MAAH Methacrylic acid anhydride
• FT-IR The presence of poly(methacrylic acid anhydride) was evidenced by absorption peaks in the following bands: 3000 - 2800 cm “1 (Aliphatic C-H), 1800 - 1740 cm “1 (Carboxylic acid anhydride), 1451 cm “1 (Aliphatic C-H). Furthermore a broad absorption peak in the band 4000-3000 cm “1 indicates the presence of hydroxyl and/or carboxylic acid.
• AACI polystyrene coated glass slides were placed in a 300 I cylindrical plasma chamber equipped with a three phase electrode system described in EP 0 741 404 B1. Plasma polymerisation of AACI was carried out under the following conditions: Pressure 0.1 mbar, power density 2.1 W/I, Argon flow 10 seem., AACI flow 200 seem, and duration 60 seconds.
• FT-IR The presence of poly(acrylic acid chloride) (PAACI) is evidenced by absorption peaks in the following bands: 3000 - 2800 cm “1 (Aliphatic.C-H), 1780 - 1740 cm “1 (Carboxylic acid chloride), 1445 cm “1 (Aliphatic C-H).
• significant absorption in 10 the band 1730 - 1700 cm “1 reveals that apart from PAACI the coating contains other carbonyl groups such as carboxylic acid, ester, and ketone.
• a broad absorption peak in the band 4000-3000 cm "1 indicates the presence of hydroxyl and/or carboxylic acid.
• the electrode geometry is illustrate in figures 4a and 4b showing a front view and a side view, respectively.
• the electrode geometry comprises two concentric electrodes 1 ,2, an outer electrode 1 and an inner electrode 2 circumferenced by the outer electrode 1.
• 20 electrode 1 consists of a 0.5 mm thick stainless steel. plate bent to form a tube with an approximately elliptical cross section of width " 500 " mm, higth 240 mm, and length 1000 mm.
• the inner electrode 2 consists of a 1 mm thick stainless steel grid bent to form a tube with an approximately elliptical cross section of width 360 mm, higth 100 mm, and length 1000 mm.
• the substrates were placed on a stainless steel grid 3 electrically
• Plasma polymerisation of AACI was carried out under the following conditions: Pressure 0.025 mbar, power density 0.18 W/I, Argon flow 10 seem., AACI flow 200 seem, and duration 120 seconds.
• FT-IR The presence of polyacrylic acid chloride (PAACI) is evidenced by absorption peaks in the following bands: 3000 - 2800 cm “1 (Aliphatic C-H), 1780 - 1740 cm “1 (Carboxylic acid chloride), 1445 cm “1 (Aliphatic C-H).
• significant absorption in the band 1730 - 1700 cm “1 reveals that apart from PAACI the coating contains other carbonyl groups such as carboxylic acid, ester, and ketone.
• a broad absorption peak in the band 4000-3000 cm "1 indicates the presence of hydroxyl and/or 5 carboxylic acid.
• X-ray photon spectroscopy (XPS): Elementary composition (atomic %) of the upper approximately 5 nm: 13.6 % Oxygen, 1.5 " % Nitrogen, 71.7 % Carbon, 13.2 % Chloride.
• the composition of the monomer is 20% O, 60% C, and 20% Cl.
• the monomer has 10 not been polymerised in stoichiometric ratio.
• a substantial amount of Cl is actually found in the resulting coating, and more important, the ratio of Cl to O is near 1 :1 as is the case for acid chloride.
• Plasma polymerisation of AACI was carried out under the following conditions: Pressure 0.025 mbar, power density 0.28 W//, Ar flow 25 seem, AACI flow 200 seem, and duration 60 s.
• FT-IR The presence of polyacrylic acid chloride (PAACI) is evidenced by absorption peaks in the following bands: 3000 - 2800 cm “1 (aliphatic C-H), 1780 - 1740 cm “1 (carboxylic acid chloride), and 1445 cm “1 (Aliphatic C-H). Moreover, strong absorption peaks of HMDSLAN base coat were observed in the bands characteristic for HMDSLAN as described in example 1 B.
• PAACI polyacrylic acid chloride
• FT-IR The presence of polyacrylie acid chloride is evidenced by absorption peaks in the following bands: 3000 - 2800 cm “1 (Aliphatic C-H), 1780 - 1740 cm “1 (Carboxylic acid chloride). However, significant absorption in the band 1730 - 1700 cm “1 reveals that apart from PAACI the coating contains other carbonyl groups such as carboxylic acid, ester, and ketone. Furthermore a broad absorption peak in the band 4000-3000 cm “1 indicates the presence of hydroxyl and/or carboxylic acid.
• Polystyrene coated glass slide A was placed in a 300 I cylindrical plasma chamber equipped with a two phase electrode system as described in PCT/DK01/00714.
• Plasma polymerisation of AACI was carried out under the following conditions: Pressure 0.025 mbar, power density 1 W/I, Ar flow 10 seem, AACI ftow 200 seem, and duration 120 s.
• Another polystyrene coated glass slide B was placed in the same plasma chamber.
• Plasma polymerisation of AACI was carried out under the following conditions: Pressure 0.100 mbar, power density 1 W/I, Ar flow 10 seem, AACI flow 200 seem, and duration 120 s. Characterisation of the resulting coating:
• FT-IR for both slides A and B The presence of polyacrylie acid chloride (PAACI) is evidenced by absorption peaks in the following bands: 3000 - 2800 cm “1 (aliphatic C-H), 1780 - 1740 cm “1 (carboxylic acid chloride), and 1442 cm “1 (Aliphatic C-H). Furthermore, FT-IR from slide B also reveals an absorption peak at 1710 cm "1 , indicating that apart from PAACI the coating contains other carbonyl groups such as carboxylic acid, ester and ketone. This peak is not present for slide A. Comparing the plasma polymerisation parameters for slides A and B, it seems that higher pressure results in other carbonyl groups than acrylic acid chloride.
• PAACI polyacrylie acid chloride
• X-ray Photoelectron Spectroseopy (XPS): Elementary composition (atomic % of the upper approximately 5 nm) of slide A: 11.9% oxygen, 73.7% ⁇ carbon and 14.4% chlorine. For comparison, elementary composition of slide B: 12.8% oxygen, 1.3% nitrogen, 70.9% carbon, 15.0% chlorine. No major difference in elementary composition is observed between slides A and B.
• the Cl concentration was 11% (average of B1 and B2) before the binding reaction took place and the Br concentration was 0.3% (average of 01 , C2 and 03) after the reaction. This indicates that the binding capacity of the coated COCI group is approx. 70%, which is quite high.
• Plasma co- polymerisation of AACI and pX was carried out under the following conditions: Pressure 0.025 mbar, Power density 0.3 W/I, Argon flow 10 seem., AACI flow 100 seem., pX flow 100 seem., and reaction time 300 seconds.
• Example 9B Polymerisation of acrolein (aldehyde functionality)
• Acrolein was plasma polymerised under the following conditions: Pressure 0.025 mbar, power density approximately 0.03 W/I, H 2 flow 15 seem, Ar flow 35 seem, acrolein flow 200 seem, and duration 600s.
• a polyhexene base coating was applied ⁇ as described in example 1 C.
• glycidylmethacrylate was plasma polymerised under the following conditions: Pressure 0.025 mbar, power density approximately 0.3 W/I, Ar was bubbled through glycidylmethacrylate at 5 seem, and duration 600s.
• T4 polynucleotide kinase (New England BioLabs). This enzyme catalyses the transfer of the terminal phosphathase group of gamma P-32 labelled adenosine triphosphate to the ⁇ '-hydroxylated terminus of an oligonucleotide. The reaction was carried out for 30 min at 37°C. Labelled oligonucleotides were purified by EtOH precipitation, washed three times with cold 70 % EtOH and examined by thin layer chromatography on silica gel plates (Merck) in 0.85 M KH 2 P0 4 .
• Samples of labelled and unlabelled oligo (unlabelled oligos applied for hybridisation to a complementary oligo sequence, see later) were prepared in 50 mM borate buffer pH 10.2 with 10 pmol oligonucleotide per ⁇ l.
• SGP1 , SGP3, SGP6 labelled and unlabelled, respectively two 1 ⁇ l aliquots were spotted onto the slide surface for coupling, se figure 1 , and incubated for 16 hrs at 22°C in a sealed humidity chamber with saturated NaCI in water in the bottom.
• spots in the upper row from the left are radio-labelled oligonucleotide SGP1 , SGP3 and SGP 6, respectively, and in the lower row from the left SGP1 , SGP3 and SGP6 unlabelled. Each oligo was spotted twice (side by side).
• the average amount of coupled oligo SGP1 , SGP3 and-SGP6 were 0.012 nmol/cm 2 , 0.004 nmol/cm 2 , and 0.004 nmol/cm 2 , respectively.
• oligo SGP4 was radio-labelled and purified as described above for the other oligos.
• Hybridisation was carried out in 100 % relative humidity for 18 hrs at 50°C in 5 x SSC, 0.1 % SDS, 0J ⁇ g/ ⁇ l salmon sperm and 0.02 pmol labelled oligo SGP4.
• the hybridisation volume was 180 ⁇ l and the hybridisation mix was covered with a cover slip.
• After hybridisation the slide was washed as follows: 5 min at 50°C in 2 x SSC; 0.1 % SDS, 10 min at 22°C in 0.2 x SSC, 10 min at 22°C in 0.1 x SSC and finally 2 min at 22°C in Millie-Q water. Subsequently the slide was dried and the hybridisation was monitored by the Cyclone Storage Phosphor System (Packard). The result of the hybridisation is shown in figure 3. Significant DNA hybridisation is demonstrated to oligo SGP1 and SGP3 (both complementary to oligo SGP4) and no hybridisation is detected for the negative control SGP6.
• Example 10 A. Immobilisation of oligo DNA to aldehyde and epoxy functionalised slides
• Oligonucleotides were applied for binding on an acrolein plasma treated glass slide surface prepared according to example 9B and on a glycidylmethacrylate plasma treated glass slide surface prepared according to example 9C by the same binding procedure as described in example 10.
• the binding results are given in the table below.

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