DE602004026338D1 - Konkatamere ligationsprodukte: zusammensetzungen, verfahren und kits dafür - Google Patents

Konkatamere ligationsprodukte: zusammensetzungen, verfahren und kits dafür

Info

Publication number
DE602004026338D1
DE602004026338D1 DE602004026338T DE602004026338T DE602004026338D1 DE 602004026338 D1 DE602004026338 D1 DE 602004026338D1 DE 602004026338 T DE602004026338 T DE 602004026338T DE 602004026338 T DE602004026338 T DE 602004026338T DE 602004026338 D1 DE602004026338 D1 DE 602004026338D1
Authority
DE
Germany
Prior art keywords
present teachings
compositions
methods
target polynucleotides
ligation products
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
DE602004026338T
Other languages
English (en)
Inventor
Caifu Chen
Kevin Hennessy
Kai Lao
Teodoro Paner
Vinod Mirchandani
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Life Technologies Corp
Original Assignee
Applied Biosystems LLC
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Applied Biosystems LLC filed Critical Applied Biosystems LLC
Publication of DE602004026338D1 publication Critical patent/DE602004026338D1/de
Anticipated expiration legal-status Critical
Active legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00—Preparation of compounds containing saccharide radicals
    • C12P19/26—Preparation of nitrogen-containing carbohydrates
    • C12P19/28—N-glycosides
    • C12P19/30—Nucleotides
    • C12P19/34—Polynucleotides, e.g. nucleic acids, oligoribonucleotides
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6816—Hybridisation assays characterised by the detection means
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Macromonomer-Based Addition Polymer (AREA)
DE602004026338T 2003-11-04 2004-11-04 Konkatamere ligationsprodukte: zusammensetzungen, verfahren und kits dafür Active DE602004026338D1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US51747003P 2003-11-04 2003-11-04
PCT/US2004/037284 WO2005047547A1 (en) 2003-11-04 2004-11-04 Concatameric ligation products: compositions, methods and kits for same

Publications (1)

Publication Number Publication Date
DE602004026338D1 true DE602004026338D1 (de) 2010-05-12

Family

ID=34590160

Family Applications (1)

Application Number Title Priority Date Filing Date
DE602004026338T Active DE602004026338D1 (de) 2003-11-04 2004-11-04 Konkatamere ligationsprodukte: zusammensetzungen, verfahren und kits dafür

Country Status (5)

Country Link
US (1) US7208278B2 (de)
EP (2) EP2204458A1 (de)
AT (1) ATE462801T1 (de)
DE (1) DE602004026338D1 (de)
WO (1) WO2005047547A1 (de)

Families Citing this family (30)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2505687A1 (en) * 2002-11-19 2004-06-03 Applera Corporation Polynucleotide sequence detection assays and analysis
WO2004065582A2 (en) * 2003-01-15 2004-08-05 Dana-Farber Cancer Institute, Inc. Amplification of dna in a hairpin structure, and applications
US20070099228A1 (en) * 2004-11-04 2007-05-03 Applera Corporation Concatameric Ligation Products: Compositions, Methods and Kits for Same
WO2005108618A2 (en) * 2004-04-30 2005-11-17 Applera Corporation Methods and kits for methylation detection
US7575863B2 (en) * 2004-05-28 2009-08-18 Applied Biosystems, Llc Methods, compositions, and kits comprising linker probes for quantifying polynucleotides
US20060019288A1 (en) * 2004-06-30 2006-01-26 Applera Corporation Methods, reaction mixtures, and kits for ligating polynucleotides
WO2006034387A1 (en) * 2004-09-21 2006-03-30 Applera Corporation TWO-COLOR REAL-TIME/END-POINT QUANTITATION OF MICRORNAS (miRNAs)
US20060211000A1 (en) * 2005-03-21 2006-09-21 Sorge Joseph A Methods, compositions, and kits for detection of microRNA
WO2007011901A2 (en) * 2005-07-15 2007-01-25 Applera Corporation Hot start reverse transcription by primer design
US20070196849A1 (en) * 2006-02-22 2007-08-23 Applera Corporation Double-ligation Method for Haplotype and Large-scale Polymorphism Detection
CA2651815A1 (en) 2006-05-10 2007-11-22 Dxterity Diagnostics Detection of nucleic acid targets using chemically reactive oligonucleotide probes
US7833716B2 (en) 2006-06-06 2010-11-16 Gen-Probe Incorporated Tagged oligonucleotides and their use in nucleic acid amplification methods
US7906287B2 (en) * 2007-05-14 2011-03-15 Insight Genetics, Inc. Methods of screening nucleic acids for single nucleotide variations
US8008010B1 (en) 2007-06-27 2011-08-30 Applied Biosystems, Llc Chimeric oligonucleotides for ligation-enhanced nucleic acid detection, methods and compositions therefor
US9909170B2 (en) 2008-09-05 2018-03-06 Washington University Method for multiplexed nucleic acid patch polymerase chain reaction
US8586310B2 (en) 2008-09-05 2013-11-19 Washington University Method for multiplexed nucleic acid patch polymerase chain reaction
US11111514B2 (en) 2008-09-05 2021-09-07 Washington University Method for multiplexed nucleic acid patch polymerase chain reaction
CN102449169B (zh) * 2009-04-01 2016-03-16 德克斯特里蒂诊断公司 化学连接依赖性的探针扩增(clpa)
JP2014513557A (ja) * 2011-05-17 2014-06-05 ディクステリティー ダイアグノスティクス インコーポレイテッド 標的核酸を検出する方法及び組成物
WO2014145269A1 (en) * 2013-03-15 2014-09-18 Theranos, Inc. Thermostable blunt-end ligase and methods of use
GB2520765A (en) 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Multiplex detection of nucleic acids
GB2520763A (en) * 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Nucleic acid probe and method of detecting genomic fragments
WO2015191777A2 (en) 2014-06-10 2015-12-17 Dxterity Diagnostics Incorporated Devices and methods for collecting and stabilizing biological samples
EP3350342B1 (de) 2015-09-18 2020-02-19 Vanadis Diagnostics Sondensatz zur analyse einer dna-probe und verfahren zur verwendung davon
US11208649B2 (en) 2015-12-07 2021-12-28 Zymergen Inc. HTP genomic engineering platform
US9988624B2 (en) 2015-12-07 2018-06-05 Zymergen Inc. Microbial strain improvement by a HTP genomic engineering platform
US11151497B2 (en) 2016-04-27 2021-10-19 Zymergen Inc. Microbial strain design system and methods for improved large-scale production of engineered nucleotide sequences
US20230242971A1 (en) * 2020-05-08 2023-08-03 Roche Sequencing Solutions, Inc. Removal of excess oligonucleotides from a reation mixture
EP4392554A1 (de) * 2021-08-23 2024-07-03 DNA Script Verfahren zur erzeugung von doppelsträngiger nukleinsäure
EP4410995A1 (de) * 2023-02-01 2024-08-07 4basebio, S.L.U. Lineare dns mit erhöhter resistenz gegen exonukleasen und verfahren zu ihrer herstellung

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6235502B1 (en) * 1998-09-18 2001-05-22 Molecular Staging Inc. Methods for selectively isolating DNA using rolling circle amplification
US6498023B1 (en) * 1999-12-02 2002-12-24 Molecular Staging, Inc. Generation of single-strand circular DNA from linear self-annealing segments

Also Published As

Publication number Publication date
US20060063163A1 (en) 2006-03-23
EP1680517B1 (de) 2010-03-31
EP1680517A1 (de) 2006-07-19
WO2005047547A1 (en) 2005-05-26
EP2204458A1 (de) 2010-07-07
ATE462801T1 (de) 2010-04-15
US7208278B2 (en) 2007-04-24

Similar Documents

Publication Publication Date Title
DE602004026338D1 (de) Konkatamere ligationsprodukte: zusammensetzungen, verfahren und kits dafür
WO2004106547A3 (en) Fast method for detecting micro-organisms in food samples
WO2009076238A3 (en) Efficient base determination in sequencing reactions
WO2001083823A8 (en) Methods and compositions for polynucleotide analysis using generic capture sequences
GB0324456D0 (en) Parallel DNA sequencing methods
WO2008014485A3 (en) Multiplex q-pcr arrays
DE60229873D1 (de) Verfahren zum nachweis und zur quantifizierung von analyten in komplexen mischungen
WO2006102309A3 (en) Methods, compositions, and kits for detection of micro rna
ATE148924T1 (de) Verfahren zur feststellung der anzahl eines bestimmten dns fragments von interesse bei der enzymatischen amplifikation von dns
DE602005020943D1 (de) Verfahren und zusammensetzungen zum nachweis von nukleinsäuren in einer biologischen probe
WO2005001113A3 (en) Methods for detecting nucleic acid variations
GB2445529A (en) Method for isothermal amplification of nucleic acids and method for detecting nucleic acids using simultaneous isothermal amplification of nucleic acids
ATE306562T1 (de) Verfahren zur analyse von wiederkehrenden pcr- podukten, das auf der analyse von dns- schmelzkurven basiert
WO2005090610A3 (en) Methods, kits and compositions pertaining to nucleic acid probes using fluorescence quenching
WO2004046344A3 (en) Polynucleotide sequence detection assays
WO2005036126A3 (en) Apparatus and methods for fluorescent detection of nucleic acids
DE59712894D1 (de) Verfahren zum nachweis klinisch relevanter veränderungen der dns-sequenz des ki-ras-onkogens, seine verwendung und testkit zur früherkennung von tumoren
ATE366325T1 (de) Verfahren zum nachweisen von mikroorganismen in einer probe
ATE492649T1 (de) Microarray-basiertes verfahren zur amplifikation und detektion von nukleinsäuren in einem kontinuierlichen prozess
WO2001061038A3 (en) Method for detecting a biological entity in a sample
WO2006073449A3 (en) Multiplex systems, methods, and kits for detecting and identifying nucleic acids
ATE335853T1 (de) Verfahren zum nachweis von hybridisierungsereignissen in nukleinsäuren
US9523117B2 (en) Gene analysis method using SDL-PCR
DE602006008263D1 (de) Verfahren zur Detektion von Staphylococcus epidermidis
EP1221466A3 (de) Nachweisreagenzien sowie Nachweisverfahren für doppelsträngige Nucleinsäure

Legal Events

Date Code Title Description
8327 Change in the person/name/address of the patent owner

Owner name: LIFE TECHNOLOGIES CORP., CARLSBAD, CALIF., US

8364 No opposition during term of opposition