DE112015001637T5 - Sequenzdatenanalysator, DNA-Analysesystem und Sequenzdatenanalyseverfahren - Google Patents

Sequenzdatenanalysator, DNA-Analysesystem und Sequenzdatenanalyseverfahren Download PDF

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Publication number
DE112015001637T5
DE112015001637T5 DE112015001637.6T DE112015001637T DE112015001637T5 DE 112015001637 T5 DE112015001637 T5 DE 112015001637T5 DE 112015001637 T DE112015001637 T DE 112015001637T DE 112015001637 T5 DE112015001637 T5 DE 112015001637T5
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Prior art keywords
sequence
sample
base
read
character
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Pending
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DE112015001637.6T
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German (de)
English (en)
Inventor
Kouichi Kimura
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Hitachi High Tech Corp
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Hitachi High Technologies Corp
Hitachi High Tech Corp
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Application filed by Hitachi High Technologies Corp, Hitachi High Tech Corp filed Critical Hitachi High Technologies Corp
Publication of DE112015001637T5 publication Critical patent/DE112015001637T5/de
Pending legal-status Critical Current

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    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
    • G06F16/30—Information retrieval; Database structures therefor; File system structures therefor of unstructured textual data
    • G06F16/33—Querying
    • G06F16/3331—Query processing
    • G06F16/334—Query execution
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids

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  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Theoretical Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medical Informatics (AREA)
  • Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Chemical & Material Sciences (AREA)
  • Computational Linguistics (AREA)
  • Data Mining & Analysis (AREA)
  • Databases & Information Systems (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
DE112015001637.6T 2014-04-03 2015-03-12 Sequenzdatenanalysator, DNA-Analysesystem und Sequenzdatenanalyseverfahren Pending DE112015001637T5 (de)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
JP2014077278A JP6198659B2 (ja) 2014-04-03 2014-04-03 配列データ解析装置、ｄｎａ解析システムおよび配列データ解析方法
JPJP2014077278 2014-04-03
PCT/JP2015/057348 WO2015151758A1 (ja) 2014-04-03 2015-03-12 配列データ解析装置、ｄｎａ解析システムおよび配列データ解析方法

Publications (1)

Publication Number Publication Date
DE112015001637T5 true DE112015001637T5 (de) 2017-02-09

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Family Applications (1)

Application Number Title Priority Date Filing Date
DE112015001637.6T Pending DE112015001637T5 (de) 2014-04-03 2015-03-12 Sequenzdatenanalysator, DNA-Analysesystem und Sequenzdatenanalyseverfahren

Country Status (6)

Country Link
US (1) US10810239B2 (https=)
JP (1) JP6198659B2 (https=)
CN (1) CN106104541B (https=)
DE (1) DE112015001637T5 (https=)
GB (1) GB2539596B (https=)
WO (1) WO2015151758A1 (https=)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10395759B2 (en) 2015-05-18 2019-08-27 Regeneron Pharmaceuticals, Inc. Methods and systems for copy number variant detection
US12071669B2 (en) 2016-02-12 2024-08-27 Regeneron Pharmaceuticals, Inc. Methods and systems for detection of abnormal karyotypes
JP6653628B2 (ja) * 2016-06-16 2020-02-26 株式会社日立製作所 Ｄｎａ配列解析装置、ｄｎａ配列解析方法及びｄｎａ配列解析システム
CN106446537B (zh) * 2016-09-18 2018-07-10 北京百度网讯科技有限公司 结构体变异检测的方法、设备及系统
US20220199199A1 (en) * 2019-02-07 2022-06-23 Biokey Bv Biological sequence information handling
WO2021134574A1 (zh) * 2019-12-31 2021-07-08 深圳华大智造科技有限公司 创建基因突变词典及利用基因突变词典压缩基因组数据的方法和装置
CN111782609B (zh) * 2020-05-22 2023-10-13 北京和瑞精湛医学检验实验室有限公司 一种快速将fastq文件均匀分片的方法
WO2022054178A1 (ja) * 2020-09-09 2022-03-17 株式会社日立ハイテク 個体ゲノムの構造変異検出方法及び装置
KR102265937B1 (ko) * 2020-12-21 2021-06-17 주식회사 모비젠 시퀀스데이터의 분석 방법 및 그 장치
CN114550828B (zh) * 2022-01-28 2024-12-10 赛纳生物科技(北京)有限公司 一种基因序列的比对方法

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AUPS115502A0 (en) * 2002-03-18 2002-04-18 Diatech Pty Ltd Assessing data sets
US8428882B2 (en) 2005-06-14 2013-04-23 Agency For Science, Technology And Research Method of processing and/or genome mapping of diTag sequences
JP5183155B2 (ja) * 2007-11-06 2013-04-17 株式会社日立製作所 大量配列の一括検索方法及び検索システム
CA2823815A1 (en) * 2011-01-14 2012-07-19 Keygene N.V. Paired end random sequence based genotyping
JP5985040B2 (ja) 2013-02-28 2016-09-06 株式会社日立ハイテクノロジーズ データ解析装置、及びその方法

Also Published As

Publication number Publication date
GB2539596B (en) 2021-03-17
WO2015151758A1 (ja) 2015-10-08
JP6198659B2 (ja) 2017-09-20
GB201616668D0 (en) 2016-11-16
GB2539596A (en) 2016-12-21
CN106104541A (zh) 2016-11-09
JP2015197899A (ja) 2015-11-09
US10810239B2 (en) 2020-10-20
US20170017717A1 (en) 2017-01-19
CN106104541B (zh) 2018-09-11

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