CN115956129A - 遗传信息分析系统和遗传信息分析方法 - Google Patents

遗传信息分析系统和遗传信息分析方法 Download PDF

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Publication number
CN115956129A
CN115956129A CN202180035290.1A CN202180035290A CN115956129A CN 115956129 A CN115956129 A CN 115956129A CN 202180035290 A CN202180035290 A CN 202180035290A CN 115956129 A CN115956129 A CN 115956129A
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sequence
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sequence information
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reference sequence
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松尾步
陶山佳久
佐藤光彦
广田峻
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Tohoku University NUC
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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
CN202180035290.1A 2021-02-03 2021-02-03 遗传信息分析系统和遗传信息分析方法 Pending CN115956129A (zh)

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PCT/JP2021/003874 WO2022168195A1 (ja) 2021-02-03 2021-02-03 遺伝情報解析システム、及び遺伝情報解析方法

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CN115956129A true CN115956129A (zh) 2023-04-11

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CN202180035290.1A Pending CN115956129A (zh) 2021-02-03 2021-02-03 遗传信息分析系统和遗传信息分析方法

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US (1) US20230187023A1 (https=)
EP (1) EP4289966A4 (https=)
JP (2) JPWO2022168195A1 (https=)
CN (1) CN115956129A (https=)
TW (1) TW202242891A (https=)
WO (1) WO2022168195A1 (https=)

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2016149261A1 (en) * 2015-03-16 2016-09-22 Personal Genome Diagnostics, Inc. Systems and methods for analyzing nucleic acid
CN107779499A (zh) * 2017-10-17 2018-03-09 中国林业科学研究院森林生态环境与保护研究所 基于snp位点的川金丝猴遗传监测和繁育管理方法
CN110088840A (zh) * 2016-11-10 2019-08-02 生命科技股份有限公司 校正核酸序列读数的重复区域中的碱基调用的方法、系统和计算机可读媒体

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9816146B2 (en) 2012-06-07 2017-11-14 Suntory Holdings Limited Method for identifying variety of hop
US10767222B2 (en) * 2013-12-11 2020-09-08 Accuragen Holdings Limited Compositions and methods for detecting rare sequence variants
CA2945962C (en) * 2014-04-21 2023-08-29 Natera, Inc. Detecting mutations and ploidy in chromosomal segments
AU2016311444B2 (en) * 2015-08-25 2019-02-07 Nantomics, Llc Systems and methods for high-accuracy variant calling
JP2017192383A (ja) * 2016-04-19 2017-10-26 学校法人藤田学園 胎児成分の検出方法
KR102933367B1 (ko) * 2018-02-27 2026-03-03 코넬 유니버시티 게놈-와이드 통합을 통한 순환 종양 dna의 초민감 검출

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2016149261A1 (en) * 2015-03-16 2016-09-22 Personal Genome Diagnostics, Inc. Systems and methods for analyzing nucleic acid
CN110088840A (zh) * 2016-11-10 2019-08-02 生命科技股份有限公司 校正核酸序列读数的重复区域中的碱基调用的方法、系统和计算机可读媒体
CN107779499A (zh) * 2017-10-17 2018-03-09 中国林业科学研究院森林生态环境与保护研究所 基于snp位点的川金丝猴遗传监测和繁育管理方法

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
YOSHIHISA SUYAMA ET AL.: ""MIG‑seq:an effective PCR‑based method for genome‑wide single‑nucleotide polymorphism genotyping using the next‑generation sequencing platform"", 《SCI REP》, 23 November 2015 (2015-11-23), pages 1 - 12 *
严学兵 等: ""不同来源SSR标记在我国披碱草属植物的通用性和效率评价"", 《草业学报》, no. 6, 20 December 2008 (2008-12-20), pages 1 - 3 *
陶山佳久: ""森林遺伝育種学的研究におけるMIG-seq 法の利用"", 《森林遗传育种》, vol. 8, 31 December 2019 (2019-12-31), pages 85 - 87 *

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Publication number Publication date
US20230187023A1 (en) 2023-06-15
JPWO2022168195A1 (https=) 2022-08-11
TW202242891A (zh) 2022-11-01
JP2026027504A (ja) 2026-02-18
EP4289966A4 (en) 2024-10-30
EP4289966A1 (en) 2023-12-13
WO2022168195A1 (ja) 2022-08-11

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