CN115433736A - Gateway prokaryotic vector system for efficiently expressing and purifying small-label active fusion protein - Google Patents

Gateway prokaryotic vector system for efficiently expressing and purifying small-label active fusion protein Download PDF

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CN115433736A
CN115433736A CN202111521272.2A CN202111521272A CN115433736A CN 115433736 A CN115433736 A CN 115433736A CN 202111521272 A CN202111521272 A CN 202111521272A CN 115433736 A CN115433736 A CN 115433736A
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谢文军
关素华
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Abstract

The invention relates to a Gateway prokaryotic vector system for efficiently expressing and purifying small-label active fusion protein, which comprises the following steps in a specific development process: 1) Taking a PET30a traditional vector as an initial skeleton, inserting the attR1-CmR-ccdB-attR2 fragment obtained by amplification into the initial skeleton through enzyme digestion reaction and recombination ligation reaction to obtain 6xHis-GW with kanamycin resistance K -6xHis vector; 2) With 6XHis-GW K The-6 xHis vector is used as a framework, and the spectinomycin resistance gene segment obtained by amplification is inserted into 6xHis-GW through enzyme digestion reaction and recombination connection reaction K -6XHis backbone, resulting in 6XHis-GW with spectinomycin resistance S -6xHis vector; 3) 6xHis-GW S The-6 xHis and the ENTR entry vector are matched for use through LR reaction, and a final prokaryotic expression vector can be constructed simply and quickly. The invention has the advantages that: can be used for high-efficiency accurate expression of single protein and has good stabilityThe contrast is strong, false positive does not exist, the purification work of active protein can be effectively simplified and promoted, and convenience is provided for the functional research of protein.

Description

Gateway prokaryotic vector system for efficiently expressing and purifying small-label active fusion protein
Technical Field
The invention relates to a Gateway prokaryotic vector system for quickly and efficiently expressing active protein.
Background
The Gateway system is a set of efficient and accurate molecular cloning technology. The system only needs two simple LR or BP reactions, can ensure that target sequences are randomly, efficiently and accurately converted between an expression vector (Destination vector) and an entry vector (ENTR vector), and can ensure that the side sequences of each target sequence are highly consistent. The active function of the protein is the embodiment of vitality. The study of the structure, function and activity of proteins has been one of the basic goals of biological research. Purification of a functional protein under non-denaturing conditions, and testing of various biological properties, is the main approach to achieve this basic goal. However, the existing protein prokaryotic expression vector system usually adopts an enzyme digestion connection system which is low in efficiency and outdated, is time-consuming and labor-consuming, has a high false positive ratio during screening and cloning, cannot ensure that each expressed small-label fusion protein has a completely consistent flanking connection sequence, and has low contrast. Therefore, a new vector system capable of utilizing Gateway molecular cloning technology is hoped to be developed, so that the method helps us express a large amount of active target proteins more efficiently and accurately, avoids the problem of false positive in the molecular cloning process, solves the problem of inconsistent flanking connection sequences among different fusion proteins, improves the contrast, and makes a previous work for purifying active functional proteins.
Disclosure of Invention
The invention aims to provide a Gateway prokaryotic vector system for efficiently expressing and purifying small-tag active fusion protein so as to solve the problems in the background technology. In addition, the invention is a high-efficiency prokaryotic expression system, and after patent approval, the invention is combined with a eukaryotic expression system (patent application No. 202110577823.0) invented separately by the research group to be developed into a kit set capable of being commercialized. The kit set can be used for expression and purification of all plant source active proteins and expression and purification of most animal source/human source active proteins.
In order to solve the technical problems, the invention develops an empty target expression vector (Destination vector) which can be matched with an entry vector (ENTR vector): 6xHis-GW S 6xHis, a Gateway prokaryotic vector system for efficiently expressing and purifying the small tag active fusion protein, and the specific development scheme is as follows:
1) Using a PET30a carrier as a substrate, carrying out double enzyme digestion on the carrier by using restriction enzymes BamHI and HindIII to obtain an enzyme digestion product, and purifying a main fragment after enzyme digestion;
2) Designing a Gateway locus sequence with recombination sites to amplify a forward primer PET30a-GWF (5-;
3) Detecting the PCR product, and purifying the PCR product with the correct fragment length;
4) Mixing the purified PET30a main segment and the purified PCR product according to a certain proportion, and adding recombinase
Figure BDA0003407517530000011
Preparing a reaction system by using MultiS and buffer, and reacting at constant temperature of 37 ℃ for half an hour;
5) Introducing the reacted recombinant product into escherichia coli DB3.1 competent cells, adding a proper amount of SOC liquid culture medium, incubating for 1 hour at 37 ℃ with a shaker at 200rpm/min, smearing a proper amount of the growth solution on a solid LB culture medium plate containing kanamycin, and putting the solid LB culture medium plate into a 37 ℃ growth box for overnight culture;
6) Design a forward primer T7F (5' -TTAATACGACTCACTATAG-
3') and a reverse primer CmRR1 (5;
7) After the proper size of clone grows on the culture dish plate, selecting part of the monoclonal antibody to be dissolved in 20ul of water, taking 1.5ul as a sample template, preparing a 20ul PCR reaction system by utilizing a pair of designed detection primers, detecting the clones, and if the PCR can amplify the fragment with the expected size, indicating that the recombination reaction is possible to succeed;
8) Selecting a monoclonal antibody capable of amplifying a fragment with an expected size, inoculating the monoclonal antibody into 5ml of LB liquid culture medium containing kanamycin, and culturing overnight by using a 37-degree shaker at 200 rpm/min;
9) Extracting monoclonal plasmids by using the kit;
10 The extracted monoclonal plasmid is subjected to sequencing inspection, and if the sequencing result is completely consistent with the theoretical design, the gateway system element, the ccdB and the CmR genes are successfully added, so that 6xHis-GW is obtained K -6xHis vector;
(use of this 6XHis-GW K And (3) carrying out LR reaction on the-6 xHis vector and an ENTR vector containing a target gene and not resisting kanamycin, and screening by utilizing an LB culture medium plate containing kanamycin to obtain a final expression vector. However, if the ENTR vector containing the target gene fragment itself already has the kanamycin resistance gene, 6XHis-GW cannot be reused K Construction of the final expression vector by LR reaction with-6 XHis, instead of the empty target expression vector 6XHis-GW with spectinomycin resistance that we finally developed S -6xHis。)
At 6XHis-GW K 6xHis-GW based on the preparation of-6 xHis S The 6xHis vector undergoes the following further steps, thereby finally obtaining:
11 With 6XHis-GW K Using a-6 xHis vector as a substrate, carrying out enzyme digestion on the substrate by using a restriction enzyme FspI to obtain an enzyme digestion product, and purifying the fragment after enzyme digestion;
12 Design to synthesize the forward primer SPECRF3 (5-
gacagcaggcatcgatgatgcgcagcacgaacccagtggacata-3 ') and reverse primer SPECRR3 (5 ' -atggcggccccacggtgcgcagtccatgcatgatgatatatctccccaa-3 '), using vector pB2GW7 as a template to amplify the entire spectinomycin resistance gene PCR fragment with a promoter, a terminator and an open reading frame;
13 Detecting the PCR product and purifying the PCR product with correct fragment length;
14 Purified 6XHis-GW K Mixing the enzyme-digested fragment of-6 XHis and the purified PCR product in certain proportion, and adding recombinase
Figure BDA0003407517530000021
Preparing a reaction system by using MultiS and buffer, and reacting at constant temperature of 37 ℃ for half an hour;
15 Introducing the reacted recombinant product into Escherichia coli DB3.1 competent cells, adding an appropriate amount of SOC liquid culture medium, incubating for 1 hour at a shaker of 37 ℃ at 200rpm/min, smearing an appropriate amount of the growth solution on a solid LB culture medium plate containing spectinomycin, and putting the solid LB culture medium plate into a 37 ℃ growth chamber for overnight culture;
16 Selecting normally growing monoclonals, inoculating the monoclonals into 5ml LB liquid culture medium containing spectinomycin, and culturing overnight by a 37-degree shaking table at 200 rpm/min;
17 Using a kit to extract a monoclonal plasmid;
18 Carrying out sequencing inspection on the extracted monoclonal plasmid, and if the sequencing result is completely consistent with the theoretical design, proving that the product is successfully developed to obtain 6xHis-GW S -6xHis, which is used when preparing a specific protein expression vector by molecular cloning, and the plasmid is stored in a large amount. (by adding 6XHis-GW S The-6 XHis vector and the ENTR vector containing the target gene and not spectinomycin resistance carry out LR reaction, and the LB culture medium plate containing spectinomycin is used for screening, so that the final expression vector can be obtained. )
The invention has the advantages that: the invention can be used for large-scale prokaryotic expression of single protein components under various conditions. Both ends of the protein have histone labels (6 XHis) with small molecular weight and no influence on the function of the protein, and the high-efficiency column-passing purification of the protein is facilitated; by adding the ccdB gene and the CmR gene, the problem of false positive in the molecular cloning process is solved; by adding attR1 and attR2 sequence sites of the gateway system, the problem of inconsistent flanking sequences among different fusion proteins is solved, the contrast is improved, and the gateway has the characteristics of high efficiency and accuracy; by adding spectinomycin resistance gene, 6xHis-GW is enabled S In the-6 XHis vector, there is a second option to use the kanamycin resistance gene, allowing us to freely select almost all commercial ENTR vectors for LR reactions. In conclusion, the invention can greatly promote the work of promoting the purification of active protein and establish the foundation for the functional research of protein.
Drawings
FIG. 1 is 6XHis-GW S Schematic structural diagram of-6 XHis vector.
FIG. 2 is 6XHis-GW K Schematic diagram of-6 XHis vector production flow.
FIG. 3 is a graph showing the relationship between 6XHis-GW and 6XHis-GW K 6xHis-GW is prepared on the basis of-6 xHis S Schematic of the flow scheme for the-6 XHis vector.
Detailed Description
The invention is illustrated below by means of specific examples, without being restricted thereto.
Examples
Gateway system prokaryotic expression vector-6 xHis-GW for fast and high-efficiency expression of active protein S -6xHis. The specific manufacturing method comprises the following steps:
1) Using a PET30a vector as a substrate, carrying out double enzyme digestion on the vector by using restriction enzymes BamHI and HindIII to obtain an enzyme digestion product, and purifying a main fragment after enzyme digestion;
2) Designing a Gateway locus sequence with recombination sites to amplify a forward primer PET30a-GWF (5-;
3) Detecting the PCR product, and purifying the PCR product with the correct fragment length;
4) Mixing the purified PET30a main fragment and the purified PCR product according to a certain proportion, and adding recombinase
Figure BDA0003407517530000041
Preparing a reaction system by using MultiS and buffer, and reacting at constant temperature of 37 ℃ for half an hour;
5) Introducing the recombinant product after reaction into Escherichia coli DB3.1 competent cells, adding an appropriate amount of SOC liquid culture medium, incubating for 1 hour at 37 ℃ with a shaker at 200rpm/min, smearing an appropriate amount of the growth liquid on a solid LB culture medium plate containing kanamycin, and placing the solid LB culture medium plate in a 37 ℃ growth chamber for overnight culture;
6) Design a forward primer T7F (5' -TTAATACGACTCACTATAG-
3') and a reverse primer CmRR1 (5;
7) After the proper size of clone grows on the plate of the culture dish, selecting part of the monoclonal antibody to be dissolved in 20ul of water, taking 1.5ul of the monoclonal antibody as a sample template, preparing a 20ul PCR reaction system by utilizing a pair of designed detection primers, detecting the clones, and if the PCR can amplify fragments with the expected size, indicating that the recombination reaction is possibly successful;
8) Selecting a monoclonal antibody capable of amplifying a fragment with an expected size, inoculating the monoclonal antibody into 5ml of LB liquid culture medium containing kanamycin, and culturing overnight by using a 37-degree shaker at 200 rpm/min;
9) Extracting monoclonal plasmids by using the kit;
10 The extracted monoclonal plasmid is subjected to sequencing inspection, and if the sequencing result is completely consistent with the theoretical design, the gateway system element, the ccdB and the CmR genes are successfully added, so that 6xHis-GW is obtained K -6xHis vector;
(use of this 6XHis-GW K -6xHis vector, LR reaction with ENTR vector containing target gene and not kanamycin-resistant, screening with LB medium plate containing kanamycin, and finally obtaining the expression vector. However, if the ENTR vector containing the target gene fragment itself already has the kanamycin resistance gene, 6XHis-GW cannot be reused K Construction of the final expression vector by LR reaction with-6 XHis, instead of the empty target expression vector 6XHis-GW with spectinomycin resistance that we finally developed S -6xHis。)
At 6XHis-GW K 6xHis-GW based on the preparation of-6 xHis S The-6 xHis vector undergoes the following further steps, thereby finally obtaining:
11 With 6XHis-GW K Using a-6 xHis vector as a substrate, carrying out enzyme digestion on the substrate by using a restriction enzyme FspI to obtain an enzyme digestion product, and purifying the fragment after enzyme digestion;
12 Design to synthesize the forward primer SPECRF3 (5-
gacagcaggcatcgatgatgcgcagcacgaacccagtggacata-3 ') and reverse primer SPECRR3 (5 ' -atggcggccccacggtgcgcagtccatgcatgatgatatatctccccaa-3 '), using vector pB2GW7 as a template to amplify the entire spectinomycin resistance gene PCR fragment with a promoter, a terminator and an open reading frame;
13 Detecting the PCR product and purifying the PCR product of the correct fragment length;
14 Purified 6XHis-GW K Mixing the enzyme-digested fragment of-6 XHis and the purified PCR product in certain proportion, and adding recombinase
Figure BDA0003407517530000042
Preparing a reaction system by using MultiS and buffer, and reacting for half an hour at a constant temperature of 37 ℃;
15 Introducing the reacted recombinant product into Escherichia coli DB3.1 competent cells, adding an appropriate amount of SOC liquid culture medium, incubating for 1 hour at a shaker of 37 ℃ at 200rpm/min, smearing an appropriate amount of the growth solution on a solid LB culture medium plate containing spectinomycin, and putting the solid LB culture medium plate into a 37 ℃ growth chamber for overnight culture;
16 Selecting normally growing monoclonals, inoculating the monoclonals into 5ml LB liquid culture medium containing spectinomycin, and culturing overnight by a 37-degree shaking table at 200 rpm/min;
17 Using a kit to extract monoclonal plasmids;
18 Carrying out sequencing inspection on the extracted monoclonal plasmid, and if the sequencing result is completely consistent with the theoretical design, proving that the product is successfully developed to obtain 6xHis-GW S 6XHis, which is retained in large quantities and is used when preparing a specific protein expression vector by molecular cloning.
(by adding 6XHis-GW S -6XHis vector and Noncystein resistant ENTR containing target geneThe vector is subjected to LR reaction, and a final expression vector can be obtained by screening an LB culture medium plate containing spectinomycin. )
The above description is only for the preferred embodiment of the present invention, but the scope of the present invention is not limited thereto, and any person skilled in the art should be considered as the technical solutions and the inventive concepts of the present invention within the technical scope of the present invention.

Claims (1)

1. The Gateway prokaryotic vector system for efficiently expressing and purifying the small-tag active fusion protein is characterized in that the specific preparation method comprises the following steps:
1) Using a PET30a vector as a substrate, carrying out double enzyme digestion on the vector by using restriction enzymes BamHI and HindIII to obtain an enzyme digestion product, and purifying a main fragment after enzyme digestion;
2) Designing a Gateway locus sequence with recombination sites to amplify a forward primer PET30a-GWF (5-;
3) Detecting the PCR product, and purifying the PCR product with the correct fragment length;
4) Mixing the purified PET30a main fragment and the purified PCR product according to a certain proportion, and adding recombinase
Figure FDA0003407517520000011
Preparing a reaction system by using MultiS and buffer, and reacting at constant temperature of 37 ℃ for half an hour;
5) Introducing the recombinant product after reaction into Escherichia coli DB3.1 competent cells, adding an appropriate amount of SOC liquid culture medium, incubating for 1 hour at 37 ℃ with a shaker at 200rpm/min, smearing an appropriate amount of the growth liquid on a solid LB culture medium plate containing kanamycin, and placing the solid LB culture medium plate in a 37 ℃ growth chamber for overnight culture;
6) Design a forward primer T7F (5' -TTAATACGACTCACTATAG-
3') and a reverse primer CmRR1 (5;
7) After the proper size of clone grows on the culture dish plate, selecting part of the monoclonal antibody to be dissolved in 20ul of water, taking 1.5ul as a sample template, preparing a 20ul PCR reaction system by utilizing a pair of designed detection primers, detecting the clones, and if the PCR can amplify the fragment with the expected size, indicating that the recombination reaction is possible to succeed;
8) Selecting a monoclonal capable of amplifying a fragment with an expected size, inoculating the monoclonal into 5ml of LB liquid culture medium containing kanamycin, and culturing overnight by using a 37-degree shaking table at 200 rpm/min;
9) Extracting monoclonal plasmid by using a kit;
10 Carrying out sequencing inspection on the extracted monoclonal plasmid, and if the sequencing result is completely consistent with the theoretical design, proving that the addition of gateway system elements and ccdB and CmR genes is successful to obtain 6xHis-GW K -6xHis vector;
at 6XHis-GW K 6XHis-GW based on the preparation of-6 XHis S The 6xHis vector undergoes the following further steps, thereby finally obtaining:
11 With 6XHis-GW K Using a-6 xHis carrier as a substrate, carrying out enzyme digestion on the substrate by using restriction enzyme FspI to obtain an enzyme digestion product, and purifying fragments after enzyme digestion;
12 Design and synthesize forward primer SPECRF3 (5 'gacagggcacgatcatgaTGCGCAGGCACGAACCCAGGTGGACATA-3') with recombination site and reverse primer SPECRR3 (5 'atggcgcccacggTGCGCAGTCATGATATATCCCAA-3'), amplify the whole spectinomycin resistance gene PCR fragment with promoter, terminator and open reading frame by taking vector pB2GW7 as a template;
13 Detecting the PCR product and purifying the PCR product of the correct fragment length;
14 Purified 6XHis-GW K Mixing the enzyme-digested fragment of-6 XHis and the purified PCR product in certain proportion, and adding recombinase
Figure FDA0003407517520000021
Preparing a reaction system by using MultiS and buffer, and reacting for half an hour at a constant temperature of 37 ℃;
15 Introducing the reacted recombinant product into Escherichia coli DB3.1 competent cells, adding an appropriate amount of SOC liquid culture medium, incubating for 1 hour at a shaker of 37 ℃ at 200rpm/min, smearing an appropriate amount of the growth solution on a solid LB culture medium plate containing spectinomycin, and putting the solid LB culture medium plate into a 37 ℃ growth chamber for overnight culture;
16 Selecting normally growing monoclonals, inoculating the monoclonals into 5ml LB liquid culture medium containing spectinomycin, and culturing overnight by a 37-degree shaking table at 200 rpm/min;
17 Using a kit to extract monoclonal plasmids;
18 Carrying out sequencing inspection on the extracted monoclonal plasmid, and if the sequencing result is completely consistent with the theoretical design, proving that the product is successfully developed to obtain 6xHis-GW S -6xHis, which is used when preparing a specific protein expression vector by molecular cloning, and the plasmid is stored in a large amount.
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Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20040132133A1 (en) * 2002-07-08 2004-07-08 Invitrogen Corporation Methods and compositions for the production, identification and purification of fusion proteins
JP2006141320A (en) * 2004-11-22 2006-06-08 Invitrogen Japan Kk Method for cloning plural nucleic acid fragments
US20060183193A1 (en) * 2005-01-07 2006-08-17 Horanyi Peter S Vectors and methods for high throughput co-expression
CN103374064A (en) * 2012-04-24 2013-10-30 中国农业大学 Plant root hair development related protein TaRSL4, and coding gene and application thereof
CN103374063A (en) * 2012-04-24 2013-10-30 中国农业大学 Plant root hair development related protein TaRHD6, and coding gene and application thereof
KR20160087489A (en) * 2015-01-13 2016-07-22 경희대학교 산학협력단 A cambium-specific promoter and uses thereof

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20040132133A1 (en) * 2002-07-08 2004-07-08 Invitrogen Corporation Methods and compositions for the production, identification and purification of fusion proteins
JP2006141320A (en) * 2004-11-22 2006-06-08 Invitrogen Japan Kk Method for cloning plural nucleic acid fragments
US20060183193A1 (en) * 2005-01-07 2006-08-17 Horanyi Peter S Vectors and methods for high throughput co-expression
CN103374064A (en) * 2012-04-24 2013-10-30 中国农业大学 Plant root hair development related protein TaRSL4, and coding gene and application thereof
CN103374063A (en) * 2012-04-24 2013-10-30 中国农业大学 Plant root hair development related protein TaRHD6, and coding gene and application thereof
KR20160087489A (en) * 2015-01-13 2016-07-22 경희대학교 산학협력단 A cambium-specific promoter and uses thereof

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
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