CN113430221B - Application of tomato WRKY37 protein in regulation of leaf senescence resistance of tomatoes and improvement of tomato yield - Google Patents
Application of tomato WRKY37 protein in regulation of leaf senescence resistance of tomatoes and improvement of tomato yield Download PDFInfo
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- CN113430221B CN113430221B CN202110815459.7A CN202110815459A CN113430221B CN 113430221 B CN113430221 B CN 113430221B CN 202110815459 A CN202110815459 A CN 202110815459A CN 113430221 B CN113430221 B CN 113430221B
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Abstract
The invention relates to the technical field of genetic engineering, in particular to application of tomato WRKY37 protein in regulation and control of leaf senescence resistance of tomatoes and improvement of tomato yield. The invention discovers that the WRKY37 protein of the tomato can regulate the leaf senescence resistance of the tomato and regulate the fruit yield of the tomato. In practical application, the WRKY37 gene in the tomato can be knocked out by a gene editing means, and the expression of WRKY37 protein is inhibited, so that a tomato strain with stronger leaf blade aging resistance is obtained; or the slwrky37-KO plant is crossed with other tomato varieties to culture the tomato varieties with anti-aging and high yield. The method utilizes the CRISPR-Cas9 genome fixed-point editing system to mutate the tomato WRKY37 gene, creates a high-yield tomato strain, remarkably improves the leaf senescence resistance of the tomato strain, remarkably improves the yield, and has important application value.
Description
Technical Field
The invention relates to the technical field of gene editing, in particular to application of tomato WRKY37 protein in regulation and control of tomato leaf senescence resistance and improvement of tomato yield.
Background
Aging is a ubiquitous, important physiological phenomenon, generally referred to as the process by which the organs of an organism or the physiological functions of the whole individual gradually decline and eventually die. Leaves are important places where plants synthesize organic compounds using light energy, and are also one of the most sensitive organs of plants to senescence (Woo et al, 2019). With the increasing knowledge of the genetic control of senescence in the field, transcription factors of the WRKY, MYB and NAM/ATAF1/CUC2(NAC) families become regulating factors of the process (Kim et al, 2018), and researches on regulating leaf senescence by the transcription factors of the WRKY family are frequently reported in recent years. WRKY transcription factors were first found in sweetpotato (Ishiguro and Nakamura, 1994), and then a large number of WRKY transcription factors, which are a large family of plant transcription factors, were sequentially found in various plants. The WRKY transcription factor is a plant-specific zinc finger-type transcription regulatory factor, and is named because it contains a highly conserved 7 amino acid sequence consisting of WRKYGQK at its N-terminus (Huang et al, 2012).
The WRKY transcription factor has the functions of participating in regulation and control of disease resistance, aging, developmental metabolism, abiotic stress and the like. The WRKY transcription factor is involved in regulating plant senescence, and the transcription factor AtWRKY6 in Arabidopsis is an important transcription factor related to senescence, and is hardly expressed in young leaves and mature leaves, but has a high expression level in senescent leaves (Robatzek., 2002). Arabidopsis AtWRKY53 is used as a positive regulator of leaf senescence, and regulates leaf senescence through a complex regulatory network (Miao et al, 2004). Arabidopsis AtWRKY57 served as a key node of jasmonic and auxin-mediated signaling pathway in jasmonic-induced leaf senescence, and wrky57 mutant produced typical leaf senescence symptoms such as leaf yellowing, low chlorophyll content, and high cell death rate (Jiang et al, 2014).
Disclosure of Invention
In order to solve the problems in the prior art, the invention provides the application of tomato WRKY37 protein in regulating and controlling the leaf-aging resistance of tomatoes and improving the yield of the tomatoes.
In a first aspect, the invention provides application of tomato WRKY37 protein or coding gene thereof or inhibitor of coding gene of tomato WRKY37 protein in regulation and control of tomato leaf senescence resistance.
The invention further provides application of the tomato WRKY37 protein or the coding gene thereof or the inhibiting factor of the coding gene of the tomato WRKY37 protein in improving the tomato yield.
The invention further provides application of the tomato WRKY37 protein or the coding gene thereof or the inhibiting factor of the coding gene of the tomato WRKY37 protein in tomato molecular breeding or preparation of gene-edited tomatoes;
the tomato molecular breeding is to cultivate high-yield tomatoes and/or leaf senescence-resistant tomatoes;
the gene-editing tomato is a high-yield gene-editing tomato and/or a leaf senescence-resistant gene-editing tomato.
Further, by reducing the expression of the tomato WRKY37 protein, the anti-aging capacity of the tomato is improved and/or the yield of the tomato is improved;
preferably, the method for reducing the expression level of tomato WRKY37 protein comprises the following steps:
the encoding gene of tomato WRKY37 protein is inactivated.
Further, the amino acid sequence of the tomato WRKY37 protein comprises a sequence shown as SEQ ID No. 1.
Further, the inhibitor of the encoding gene of the tomato WRKY37 protein comprises a biological material capable of inhibiting the expression of the tomato WRKY37 protein by editing the tomato WRKY37 gene;
preferably, the biological material is a gRNA, or an expression vector comprising the gRNA, or an engineered bacterium comprising the gRNA;
more preferably, the gRNA comprises a nucleotide sequence as set forth in SEQ ID No.3 or SEQ ID No. 4.
In a second aspect, the present invention provides a gRNA for editing tomato WRKY37 protein, the gRNA comprising a nucleotide sequence as set forth in SEQ ID No.3 or SEQ ID No. 4.
The invention further provides a biological material comprising the gRNA, and an expression cassette, a vector, a transgenic cell or an engineering bacterium of the biological material.
In a third aspect, the present invention provides a method for increasing tomato yield, comprising: reducing the expression level of the encoding gene of tomato WRKY37 protein in tomato; the encoding gene of the tomato WRKY37 protein comprises a nucleotide sequence shown as SEQ ID No. 2.
Further, knocking out a coding gene of tomato WRKY37 protein in tomato through a CRISPR/Cas9 system; the gRNA used in the CRISPR/Cas9 system includes a nucleotide sequence shown as SEQ ID No.3 or SEQ ID No. 4.
The invention has the following beneficial effects:
the invention discovers that the tomato WRKY37 protein participates in regulation and control of leaf senescence resistance and fruit yield of tomatoes, and can obviously improve the leaf senescence resistance of the tomatoes and improve the fruit yield of the tomatoes by reducing the expression of the tomato WRKY37 protein. When the method is applied to actual production, on one hand, the SlWRKY37 gene of the tomato can be mutated to obtain a tomato line with stronger anti-aging capability; on the other hand, the mutant slwrky37-KO plant can be crossed with other tomato varieties to culture anti-aging and high-yield tomato varieties. The tomato WRKY37 protein, the coding gene thereof and the corresponding inhibitor have great application values in tomato leaf senescence resistance and high-yield breeding.
Drawings
FIG. 1 is a schematic diagram of a target site and gene editing of the SIWRKY37 gene provided in example 1 of the present invention.
FIG. 2 is a cloning gel diagram of a SIWRKY37 gene fragment provided in example 1 of the present invention; wherein lane 1 is slwrky-KO-1 and lane 2 is slwrky-KO-3.
FIG. 3 is a picture of the senescence status of the first true leaves of the SIWRKY37 gene editing strain provided in example 2 of the present invention.
FIG. 4 is a schematic diagram of fruit yield of the SIWRKY37 gene editing line provided in example 2 of the present invention.
FIG. 5 is a statistical chart of fruit yield of the SIWRKY37 gene editing line provided in example 2 of the present invention.
Detailed Description
The following examples are intended to illustrate the invention but are not intended to limit the scope of the invention. These examples are intended to illustrate the invention and are not intended to limit the scope of the invention. The experimental procedures in the following examples are conventional unless otherwise specified.
Example 1 tomato SlWRKY37 Gene knockout based on CRISPR-Cas9 System
1. Background Material preparation
The variety used by the method is tomato Micro Tom, tomato seeds are subjected to surface disinfection for 15min by 3% sodium hypochlorite, are washed for 7-8 times by sterile water after disinfection, and are sown in an MS culture medium after being washed clean. Taking the cotyledon part of the tomato seedling as a tissue culture material, cutting off the leaf apex, cutting the rest part into a square of 5mm multiplied by 5mm, placing the processed cotyledon with the back face upward on a pre-culture medium, and carrying out dark culture.
2. Selection of 2gRNA targets
The NCBI website (https:// www.ncbi.nlm.nih.gov /) is logged in, and the sequence of tomato S1WRKY37 gene is queried. According to the sequence of SlWRKY37 gene, the selected target point is located on the antisense chain of the second exon of SlWRKY37 gene, and contains sequences WRKY37-gRNA1 and WRKY37-gRNA2 which are characterized by NGG sequence, based on the 2gRNA sequence characteristics of CRISPR-Cas9, and the nucleotide sequence is shown as SEQ ID NO.3 or SEQ ID NO. 4.
3. Construction of expression plasmid pHSE401-2gR containing 2gRNA target
According to two selected 2gRNA target sequences, primers WRKY37-DT1-Bs F, WRKY37-DT1-F0, WRKY37-DT2-R0 and WRKY37-DT2-BSR (S EQ ID NO.5-8), WRKY37-DT1-BsF/WRKY37-DT2-BSR each 2 mul, WRKY37-DT1-F0/WRKY37-DT2-R0 each 0.5 mul are synthesized, intermediate vector pCBC-DT1T2 plasmid is used as a template for carrying out four-primer PCR amplification, and pCBC-DT1T2-PCR products are recovered after electrophoresis. The ligation system was digested by BsaI, the pHSE401 plasmid was ligated to pCBC-DT1T2-PCR by digestion with BsaI, the pCBC-DT1T2-PCR sequence was ligated to the plasmid pHSE401 vector, and the fragment of pCBC-DT1T2-PCR containing AtU6 promoter and 2g RNA sequence was cloned into pHSE401 vector by T4 ligation, to obtain recombinant vector pHSE401-2gR (pHSE401+ pCBC-DT1T 2-PCR).
The vectors pCBC-DT1T2 and pHSE401 are from the biological college of Chinese university of agriculture.
4. Plasmid pHSE401-2gR was transformed into Agrobacterium tumefaciens GV3101
And (3) transforming the recombinant vector pHSE401-2gR in the step (3) into an agrobacterium GV3101 strain by a heat shock method to obtain a recombinant agrobacterium containing the recombinant expression vector pHSE401-2gR, which is named as GV3101-pHSE401-2 gR.
5. Agrobacterium-mediated transformation of tomato
Infecting young cotyledons of a tomato variety Micro Tom by recombinant agrobacterium tumefaciens GV3101-pHSE401-2gR, and taking plants which are successfully regenerated and rooted on a culture medium containing herbicide antibiotics as transgenic positive plants slwrky-KO-1 and slwrky-KO-3.
6. Transgenic tomato identification and mutation site detection
Extracting T0 generation tomato leaf slice genome DNA, and designing and identifying primers WRKY37-F and WRKY37-R (SEQ ID NO.9-10) according to target gene segments. A T0-generation transgenic plant genome is used as a template, WRKY37-F and WRKY37-R are used as primers to amplify an SlWRKY37 gene segment, a PCR product is used for sequencing and verifying a mutant tomato strain, and whether a target site is mutated or not is judged through a sequencing sequence.
The PCR reaction system is shown in Table 1.
TABLE 1 amplification system of target gene SlWRKY37 gene fragment sequence
The amplification result is shown in FIG. 2, lanes 2 and 3 in FIG. 2 show No.1 and No.3 of transgenic plants, which are named as slwrky-KO-1 and slwrky-KO-3, respectively, M represents a DNA molecule Marker, and the sizes of the bands are 2000bp, 1000bp and 750bp from top to bottom in sequence. The PCR fragment of the SlWRKY37 gene is sequenced, a sequencing primer is WRKY37-F, and the sequencing result is shown in figure 1. The results show that the WRKY37 genes of the two transgenic plants have deletion mutation near the PAM locus (namely, TGG and AGG sequences), and the two chromosomes have mutation at the same time. SlWRKY37 genes on two chromosomes of the SlWRKY-KO-1 plant are mutated, namely 34 bases are continuously deleted, a SlWRKY37 gene on the chromosome of the SlWRKY-KO-3 plant is mutated, and six bases are intermittently deleted.
The nucleotide sequence of the slwrky-KO-1 plant is shown in SEQ ID NO.11, and the deduced amino acid sequence after mutation is shown in SEQ ID NO. 12; the nucleotide sequence of the slwrky-KO-3 plant is shown in SEQ ID NO.13, and the deduced amino acid sequence after mutation is shown in SEQ ID NO. 13. Due to the deletion of the basic group, the translation dislocation of the post sequence of the PAM locus is caused, the protein translation is terminated in advance, and the function is changed.
Example 2 anti-aging test and use of transgenic lines tomato
1. Detection for delaying senescence and improving yield of SlWRKY37 gene editing strain
Selecting a knockout strain SlWRKY-KO-1SlWRKY-KO-3 which is homozygous through sequencing verification as a control group, selecting wild types with consistent growth vigor and the same quantity, knocking seedlings of the gene knockout strains SlWRKY-KO-1 and SlWRKY-KO-3, planting 30 strains of each strain in a sunlight greenhouse and a light culture box respectively, and observing the natural aging conditions of different strains of the slwrKY37 in a natural growth state until the whole life cycle of fruit maturity.
The setting of the illumination incubator: the light period is 16/8h (light/dark), the temperature is 25/18 deg.C (light/dark), and the light intensity is 125 μmol m-2s-1The relative humidity is about 60%.
In the later stage of plant growth, the leaves of the two knock-out lines slwrky-KO-1 and slwrky-KO-3 senesced more slowly and the fruiting rate was higher compared to the wild-type control group. As shown in figure 3, in the senescence condition of the first true leaves of the plants of different strains, the chlorophyll content and the photosynthetic property of the first true leaves of slwrky37-KO-1 and slwrky-KO-3 are obviously higher than those of the wild type, and the senescence is slower. Picking fruits of different strains in a mature period, as shown in figure 4, wherein the number of fruits of two gene knockout strains slwrky-KO-1 and slwrky-KO-3 is obviously more than that of wild WT, and as shown in figure 5, the yield of the two gene knockout strains is obviously higher than that of WT according to the statistics of yield measurement of different strains.
Therefore, the anti-aging tomato can be enhanced by using the CRISPR-Cas9 system containing the gRNA sequence to edit the SlWRKY37 gene at a fixed point, and the SlWRKY37-KO plant is hybridized with other tomato varieties, so that anti-aging strains can be cultivated, anti-aging germplasm resources of the tomato are enriched, and a new idea is provided for high-yield breeding of the tomato.
Although the invention has been described in detail hereinabove with respect to a general description and specific embodiments thereof, it will be apparent to those skilled in the art that modifications or improvements may be made thereto based on the invention. Accordingly, such modifications and improvements are intended to be within the scope of the invention as claimed.
Sequence listing
<110> university of agriculture in China
Application of tomato WRKY37 protein in regulation of tomato leaf aging resistance and improvement of tomato yield
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Leu Gly Thr Ile Ser Tyr Asp Asp Phe Leu Pro Leu Ser Tyr Pro Gln
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Asp Glu Leu Gly Glu Leu Glu Leu Pro Pro Ser Ser Ser Thr Ser Phe
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Ala Gly Ile Phe Glu Glu Ala Ile Leu Val Asp Pro Ser Ser
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Claims (4)
1. The application of the inhibitor of the encoding gene of tomato WRKY37 protein in improving the leaf aging resistance of tomato;
the inhibitory factor is gRNA with a sequence shown in SEQ ID NO.3 or SEQ ID NO. 4;
the application is as follows: the encoding gene of the tomato WRKY37 protein is mutated by the inhibitor of the encoding gene of the tomato WRKY37 protein so as to improve the leaf aging resistance of tomatoes;
the amino acid sequence of the tomato WRKY37 protein is shown in SEQ ID NO. 1.
2. The application of the inhibitor of the encoding gene of tomato WRKY37 protein in improving the tomato yield;
the inhibitory factor is gRNA with a sequence shown in SEQ ID NO.3 or SEQ ID NO. 4;
the application is as follows: the encoding gene of the tomato WRKY37 protein is mutated by the inhibitor of the encoding gene of the tomato WRKY37 protein, so that the tomato yield is improved;
the amino acid sequence of the tomato WRKY37 protein is shown in SEQ ID NO. 1.
3. The application of the inhibitor of the encoding gene of the tomato WRKY37 protein in tomato molecular breeding or preparing gene-edited tomatoes;
the tomato molecular breeding is to cultivate high-yield tomatoes and/or leaf senescence-resistant tomatoes;
the gene-editing tomato is a high-yield gene-editing tomato and/or a leaf senescence-resistant gene-editing tomato;
the inhibitory factor is gRNA with a sequence shown in SEQ ID NO.3 or SEQ ID NO. 4;
the application is as follows: mutating the encoding gene of the tomato WRKY37 protein by using an inhibitor of the encoding gene of the tomato WRKY37 protein so as to carry out tomato molecular breeding or prepare a gene-editing tomato;
the amino acid sequence of the tomato WRKY37 protein is shown in SEQ ID NO. 1.
4. A method for increasing tomato yield, comprising: adopting the gRNA of the nucleotide sequence shown as SEQ ID NO.3 or SEQ ID NO.4 to mutate the encoding gene of tomato WRKY37 protein in tomato;
the amino acid sequence of the tomato WRKY37 protein is shown in SEQ ID NO. 1.
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