CN113234731A - GmARF16 gene for coding soybean ARF transcription factor and application thereof - Google Patents

GmARF16 gene for coding soybean ARF transcription factor and application thereof Download PDF

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CN113234731A
CN113234731A CN202110509271.XA CN202110509271A CN113234731A CN 113234731 A CN113234731 A CN 113234731A CN 202110509271 A CN202110509271 A CN 202110509271A CN 113234731 A CN113234731 A CN 113234731A
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张大健
王超凡
庄永斌
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Shandong Agricultural University
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Abstract

The invention discloses a GmARF16 gene for coding a soybean ARF transcription factor and application thereof, wherein the nucleotide sequence of the GmARF16 gene is shown as SEQ ID NO. 1. The gene can influence the growth and development of the nodule. In addition, the method utilizes a CRISPR/Cas vector, quickly obtains a chimera transgenic plant through agrobacterium-mediated soybean hairy root genetic transformation, successfully mutates the GmARF16 gene, analyzes the salt resistance of the chimera transgenic plant, and shows that the mutant GmARF16 gene can improve the salt resistance of soybean and inhibit the generation of root nodules of the soybean.

Description

GmARF16 gene for coding soybean ARF transcription factor and application thereof
Technical Field
The invention belongs to the technical field of biology, and particularly relates to a coding soybean ARF transcription factor GmARF16 and application thereof.
Background
Soil salinization is one of the most main factors influencing global agricultural production, Chinese land salinization approximately occupies 1/10 of global salinization area, and the land salinization shows a rising trend, and secondary salinization of China exceeds 6 multiplied by 106hm2Accounting for 25% of the cultivated land area in China. Due to the fact thatTherefore, the research on the salt tolerance mechanism of plants and the improvement of the salt tolerance of crops become the focus of attention of many researchers. Salt stress can cause various damages to plants, such as ion imbalance, oxidative stress, osmotic stress and the like, and too high salt concentration can even cause plant death.
Auxins have little control over almost all aspects of plant growth and development and plant response to biotic, abiotic stresses and growth tendencies in the environment. Arfs (auxin stress factors) are transcription factors that are critical to auxin signal sensing and signaling pathways, and play an extremely important role in plant development, response to biotic, abiotic stress and growth tendency, and the like. It activates or inhibits the expression of a target gene by specifically binding to the auxin response element TGTCTC/TGTCCC/TGTCAC in the promoter region of the auxin response gene. ARF proteins comprise 3 domains: an N-terminal B3-type DNA Binding Domain (DBD), an intermediate MR domain-inhibiting domain (RD) or Activating Domain (AD), and a C-terminal dimerization domain (CTD).
Soybean (Glycine max (Linn.) Merr) originated in china 5000 years ago, is an important crop and feed crop, plays an important role in the crop structure of China, but in recent years, the soybean industry of China is slowly developed, the import ratio is high, and the contradiction between supply and demand is more prominent. Meanwhile, the saline-alkali soil area in China is wide, the saline-alkali soil area tends to be further increased due to climate change and unreasonable cultivation modes of human beings, and soil salinization has great influence on soybean morphogenesis and growth and development, so that the yield and quality of soybeans are directly influenced. Therefore, the salt stress related gene GmARF16 is cloned in the soybean, so that gene resources can be provided for the salt tolerance research of the soybean, and the contribution is made to the cultivation of new stress-resistant soybean varieties.
Disclosure of Invention
An object of the present invention is to provide a GmARF16 gene encoding a soybean ARF transcription factor.
The second purpose of the invention is to provide a protein coded by the gene.
The third purpose of the invention is to provide an expression vector capable of mutating the gene, namely a GmARF16 gene editing vector.
The fourth object of the present invention is to provide a host cell containing the expression vector.
The most important purpose of the invention is to provide the application of inhibiting the expression of the gene in improving the salt resistance of the soybean.
The technical scheme of the invention is summarized as follows:
a GmARF16 gene for coding a soybean ARF transcription factor is a nucleotide sequence shown in SEQ ID NO. 1. The nucleotide sequence consists of 2103 bases. The GmARF16 gene has the function of regulating the salt resistance of plants.
The protein coded by the gene is an amino acid sequence shown in SEQ ID NO. 2. The sequence consists of 700 amino acid residues (1).
The protein encoded by the GmARF16 gene may further include a protein derived from (1) which is formed by substituting, deleting or adding one or more (e.g., 1 to 30; preferably 1 to 20; more preferably 1 to 10; e.g., 5, 3) amino acid residues in the amino acid sequence of SEQ ID NO.2 and has (1) a protein function; or a protein derived from (1) having a homology of 80% (preferably 90% or more, e.g., 95%, 98%, 99% or more) or more with the protein sequence defined in (1) and having the protein function of (1).
That is, the functions of the gene protected by the present invention include not only the above-mentioned GmARF16 gene, but also homologous genes having high homology (e.g., homology higher than 40%, preferably higher than 50%, preferably higher than 60%, more preferably higher than 70%, more preferably higher than 80%, more preferably higher than 90%, more preferably higher than 95%, more preferably higher than 98%) with SEQ ID NO. 1.
Transgenic cell lines, recombinant bacteria, recombinant vectors, expression vectors and host cells containing the expression vectors containing the genes also fall into the protection scope of the invention.
The gene has the function of promoting the generation of soybean nodules, and compared with GmARF16 gene editing mutant plants, the number of the nodules is larger. It can be seen that soybean GmARF16 can influence the growth and development of the nodule.
The GmARF16 gene editing vector, gene editing genetic material, a host cell containing the vector and a construction method thereof also fall into the protection scope of the invention. The CRISPR/Cas vector pGEL201 XU 6-GmARF16 containing the gene can mutate the GmARF16 gene. Specifically, the method utilizes a CRISPR/Cas vector, and soybean hairy root genetic transformation mediated by agrobacterium tumefaciens is utilized to quickly obtain a chimeric transgenic plant, so that the GmARF16 gene is successfully mutated, namely, the functional expression of the gene is inhibited, the salt resistance of soybean can be improved, and the generation of soybean nodules can be inhibited.
In the present invention, there is no particular limitation on the plant suitable for use in the present invention, as long as it is suitable for carrying out a gene transformation operation, such as various crops, flowering plants, or forestry plants. The plant may be, for example (without limitation): dicotyledonous, monocotyledonous, or gymnosperm.
As an embodiment, the "plant" includes but is not limited to: the soybean is suitable for all genes with the gene or the genes homologous with the gene. The gene is particularly suitable for plants needing to improve the salt tolerance, and in the practical application process, the plants needing to improve the salt tolerance can be cultivated into strains of the gene in a transgenic way.
As used herein, "plant" includes whole plants, parent and progeny plants thereof, and various parts of the plant, including seeds, fruits, shoots, stems, leaves, roots (including tubers), flowers, tissues and organs, having the gene or nucleic acid of interest in each of these various parts. Reference herein to "plant" also includes plant cells, suspension cultures, callus tissue, embryos, meristematic regions, gametophytes, sporophytes, pollen and microspores, again wherein each of the foregoing comprises a gene/nucleic acid of interest.
The present invention includes any plant cell, or any plant obtained or obtainable by the methods therein, as well as all plant parts and propagules thereof. The present patent also encompasses transfected cells, tissues, organs or whole plants obtained by any of the foregoing methods. The only requirement is that the progeny exhibit the same genotypic or phenotypic characteristics and that the progeny obtained using the methods of this patent have the same characteristics.
The invention also extends to harvestable parts of a plant as described above, but not limited to seeds, leaves, fruits, flowers, stems, roots, rhizomes, tubers and bulbs. It also relates to other post-harvest derivatives of the plant, such as dry granules or powders, oils, fats and fatty acids, starches or proteins. The invention also relates to food products or food additives obtained from the relevant plants.
The invention has the advantages that:
the invention discloses a GmARF16 gene for coding a soybean ARF transcription factor for the first time, in the process of identifying the function of the GmARF16 gene, a chimera transgenic plant is quickly obtained by utilizing a CRISPR/Cas vector through agrobacterium-mediated soybean hairy root genetic transformation, the GmARF16 gene is successfully mutated, the chimera transgenic plant is subjected to salt resistance analysis, and the result shows that the mutated GmARF16 gene can improve the salt resistance of soybean and can inhibit the generation of soybean root nodules.
The function of the GmARF16 gene knocked out from soybean is verified by the inventor by using a gene editing technology, so that the function of the GmARF16 gene in plant development and plant salt tolerance is favorably clarified from a molecular mechanism, and a theoretical basis and a gene resource are provided for soybean molecular breeding.
For saline-alkali areas, salt-tolerant plants need to be cultivated to adapt to the growth of the areas, and new varieties can be cultivated by knocking out GmARF16 genes or homologous genes.
Drawings
FIG. 1 sequence structure analysis of GmARF 16;
FIG. 2 salt stress induced expression of GmARF 16;
FIG. 3 expression of GmARF16 in different tissues;
FIG. 4 identification of the salt tolerance of mutant plants under salt stress to controls (EV: no-load control; CR-GmARF 16: GmARF16 mutant plants);
FIG. 5 relative root elongation of mutant plants versus control under salt treatment (EV: no-load control; CR-GmARF 16: GmARF16 mutant plants);
FIG. 6 identification of the mutant plant target site gene editing (bimodal is considered to be the presence of gene editing);
FIG. 7 mutant plants and control nodule growth phenotype (EV: empty control; CR-GmARF 16: GmARF16 mutant plants).
Detailed Description
The present invention will be described in detail below with reference to specific examples. These embodiments are provided so that this disclosure will be thorough and complete, and will fully convey the scope of the invention to those skilled in the art.
Unless otherwise specified, the technical means used in the examples are conventional means well known to those skilled in the art. The test methods in the following examples are conventional methods unless otherwise specified. Unless otherwise indicated, all reagents and materials used are commercially available.
Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art. In addition, any methods and materials similar or equivalent to those described herein can be used in the practice of the present invention. The preferred embodiments and materials described herein are intended to be exemplary only.
The practice of the present invention will employ, unless otherwise indicated, conventional techniques of botany, microorganisms, tissue culture, molecular biology, chemistry, biochemistry, DNA recombination, and bioinformatics, which will be apparent to those skilled in the art. These techniques are explained fully in the published literature, and the methods of DNA extraction, phylogenetic tree construction, gene editing method, gene editing vector construction, gene editing plant acquisition, and the like used in the present invention can be realized by methods already disclosed in the prior art, in addition to the methods used in the following examples.
The terms "nucleic acid", "nucleic acid sequence", "nucleotide", "nucleic acid molecule" or "polynucleotide" as used herein are meant to include isolated DNA molecules (e.g., cDNA or genomic DNA), RNA molecules (e.g., messenger RNA), natural types, mutant types, synthetic DNA or RNA molecules, DNA or RNA molecules composed of nucleotide analogs, either single-stranded or double-stranded structures. These nucleic acids or polynucleotides include, but are not limited to, gene coding sequences, antisense sequences, and regulatory sequences for non-coding regions. These terms include a gene. "Gene" or "gene sequence" is used broadly to refer to a functional DNA nucleic acid sequence. Thus, a gene may include introns and exons as in genomic sequences, and/or include coding sequences as in cDNA, and/or include cDNA and its regulatory sequences. In particular embodiments, e.g., with respect to an isolated nucleic acid sequence, it is preferred to default to cDNA.
In addition, in order to more intuitively understand the technical scheme of the invention, some technical terms related to the invention are explained as follows:
"Gene editing, is an emerging Gene function technology that precisely modifies specific target sequences in the genome of an organism.
"Gene knockout", Gene knock out, is a technique for site-directed integration of an exogenous Gene into a certain site on the genome of a target cell by homologous recombination to achieve the purpose of site-directed modification of a certain Gene on a chromosome.
"Mutant, refers to an individual that has undergone a mutation and is characterized by a phenotype that is different from the wild type.
"Expression vectors" refer to vectors in which Expression elements (such as promoter, RBS, terminator, etc.) are added on the basis of the basic skeleton of the cloning vector to enable the Expression of the target gene.
An Agrobacterium-mediated transformation method, Agrobacterium-mediated transformation, refers to a technique of inserting a target gene into a modified T-DNA region, transferring and integrating an exogenous gene into a plant cell by virtue of Agrobacterium infection, and then regenerating a transgenic plant by cell and tissue culture techniques.
Examples
The inventor of the invention utilizes bioinformatics technology to obtain the GmARF16 gene sequence on the basis of soybean genome. The coding frame sequence of the GmARF16 gene is cloned by molecular cloning. In addition, the GmARF16 gene is edited in soybean by using a CRISPR/Cas9 gene editing system to obtain a function deletion mutant, and a gene editing plant is subjected to function verification.
Compared with the traditional transgenic technology, the CRISPR/Cas9 gene editing technology has many advantages. The traditional transgenic technology is characterized in that an exogenous target gene is introduced into a target organism, so that the plant traits are changed, the insertion position of the target gene in a receptor genome is random, and the CRISPR/Cas9 gene editing technology is not introduced with the exogenous gene and only modifies the endogenous gene, so that the technology is safer and more efficient; secondly, the CRISPR/Cas9 gene editing technology can realize simultaneous editing of multiple sites and can realize accurate regulation and control of mutation or insertion sites, which cannot be realized by the traditional transgenic technology; in addition, the traditional transgenic technology can only down-regulate the expression of a target gene at the RNA level, can not completely inhibit the transcription of the target gene, and is unstable in heredity, and the CRISPR/Cas9 gene editing technology can realize the mutation of the target gene and is more stable and reliable.
First, obtaining GmARF16 gene of coding soybean ARF transcription factor
A GmARF16 gene (figure 1) for coding a soybean ARF transcription factor is obtained by screening through various technical means such as transcriptome, genome and proteomics, the full-length coding frame nucleotide sequence of the gene is 2103bp and consists of 700 amino acids, and the nucleotide sequence is obtained through sequencing and is shown as a sequence SEQ ID NO.1, and the protein sequence is shown as a sequence SEQ ID NO. 2.
Second, response of GmARF16 gene to salt stress and expression determination at different positions
Treating with 0.9% NaCl +1/2Hoagland solution in the first heart stage of two leaves, taking leaves at different time periods, quick freezing with liquid nitrogen, and storing in a refrigerator at-80 deg.C. RNA was extracted and inverted to cDNA using the Trizol method. A fluorescent quantitative kit from TAKARA was used. The reaction was carried out on a quantitative PCR instrument (Applied Biosystems Stepone Plus), the expression level of the gene was detected according to a relative quantitative method, the reaction program was carried out according to the instruction manual provided by TAKARA, the soybean Actin gene was used as an internal reference in the reaction, and the primer sequence was:
Actin-F:CGGTGGTTCTATCTTGGCATC
Actin-R:GTCTTTCGCTTCAATAACCCTA
GmARF16-F:GTTATTTTTCTTGTGTGTGCGC
GmARF16-R:CTTACAGAGCAAAGCATAGCAG
taking different parts of the leaves, quickly freezing the leaves with liquid nitrogen, and storing the leaves in a refrigerator at the temperature of minus 80 ℃. RNA was extracted and inverted to cDNA using the Trizol method. A fluorescent quantitative kit from TAKARA was used. The reaction was carried out on a quantitative PCR instrument (Applied Biosystems Stepone Plus), the expression level of the gene was detected by a relative quantitative method, the reaction program was carried out according to the manual provided by TAKARA, the soybean Actin gene was used as an internal reference in the reaction, and the primer sequence was as described above.
The results showed that the GmARF16 gene was induced by salt stress and the expression level in roots was higher than other parts (FIG. 2, FIG. 3).
Thirdly, functional identification of soybean ARF transcription factor GmARF16 gene
In order to study the role of the GmARF16 gene in salt resistance of soybean, the function of the GmARF16 gene is identified by constructing a gene editing transgenic plant.
3.1 construction of Gene editing vectors
A CRISPR/Cas9 gene editing system is used, a knockout target of a GmARF16 gene is predicted through an online website (http:// skl.scau.edu.cn/targettdisign /), SgRNA is designed on CDS close to a starting coding region, and a pGEL201 XU 6-GmARF16 gene knockout vector is constructed according to the instruction.
(1) The target site is found by using CRISPR-GE online software, and the synthetic oligonucleotide is designed, wherein the primer sequence is as follows:
and (3) primer F: ggattgCAGGAATTTGCAGTGAGAAC
And (3) primer R: aaacGTTCTCACTGCAAATTCCTGca
(2) Annealing oligonucleotides to double strands
Figure BDA0003058418510000061
The reaction was carried out at 94 ℃ for 50s and cooled at room temperature.
(3) Connection carrier
Figure BDA0003058418510000062
The reaction conditions were as follows: 5min at 37 ℃; 5min at 20 ℃; coli DH 5. alpha. was transformed for 8 cycles. It was spread on LB plates containing 100mg/ml kanamycin resistance. Culturing at 37 ℃, picking single colonies after 12h for colony PCR verification, sequencing positive colonies, and using M13 universal primers as sequencing primers.
3.2 genetic transformation of Soybean hairy root
(1) Planting 50 soybean Dongnong in mixed soil, germinating in a greenhouse, and picking out agrobacterium with an injector to infect cotyledon nodes when the cotyledon is not completely unfolded in 6 days;
(2) covering with transparent cover after injection, keeping the interior moist, burying the infection site and the part below the infection site with vermiculite, and watering. Culturing at 28 deg.C for 14 hr/10 hr in dark for 3-4 weeks, pouring water every two days, and maintaining the wet environment of the impregnated part.
(3) When hairy roots grow to 5-10cm, the main roots were subtracted, the complex plants were placed in clear water, recovered for 3-4 days, then treated with 120mM NaCl for six days, and the root length was measured before and after salt treatment, respectively.
3.3 Positive identification of Gene-edited transgenic Material
Taking a single root, extracting genome DNA, designing a specific PCR primer (F: CTGTTGCAATCACTTACTTGT, R: CCTTCACACAAAACTCTGGG) near the SgRNA target site, amplifying a sequence near the mutation site, sequencing, and judging that gene editing exists when a sequencing peak image has double peaks at the mutation site (figure 6).
3.4 phenotypic analysis of Soybean GmARF16 Gene editing mutants
In clear water, after 6 days of culture, the relative elongation of roots of the mutant is not significantly different from that of a control, leaves are kept green (figure 4), while the relative elongation of roots of the mutant plant is higher than that of the control after 6 days of salt treatment, most of the leaves of the mutant plant are kept green, and the leaves of the control plant are yellow, withered and even inactivated, so that the mutant GmARF16 gene can improve the tolerance of soybeans to salt stress under the condition of salt stress (figure 4 and figure 5).
Meanwhile, the mutant GmARF16 gene in the soybean hairy root can inhibit the generation of the root nodules, and in an unloaded control, each hairy root grows about 15 root nodules on average, while only about 8 root nodules are generated in each mutant hairy root, which shows that the soybean GmARF16 can influence the growth and development of the root nodules, and the generation of the root nodules is obviously reduced after the gene is mutated (figure 7).
Sequence listing
<110> Shandong university of agriculture
<120> GmARF16 gene for coding soybean ARF transcription factor and application thereof
<130> 2021
<160> 2
<170> SIPOSequenceListing 1.0
<210> 1
<211> 2103
<212> DNA
<213> Glycine max(Linn.)Merr
<400> 1
atgctatttc aggaatttgc agtgagaaca ggttactgta tgatggagtc aaaggagaaa 60
ttgaaagagg tggagaagtg tttggattct cggctatggc atgcgtgtgc gggagggatg 120
gttcaaatgc cagtggtgaa tgctaaggtg ttctactttc ctcagggtca tgctgaacat 180
gcatgtggac ccgtggactt cagggtttat cccaaaattc cacctttcat tcaatgcaaa 240
gttggagcta tcaaatacat ggctgatcct gaaactgatg aggtttatgt aaagcttagg 300
cttgttcctt tgaccagaaa cgagggtgat tttgaggatg atgctgttgg aggcatcaat 360
ggatctgaaa ataaagataa atccccttct tttgccaaaa ccttgacaca gtctgatgcc 420
aacaatggtg ggggcttttc tgttcccaga tattgtgctg agacaatttt tcctcggttg 480
gactattccg cggaccctcc cgttcagaac atccttgcca aggatgttca tggtgagaca 540
tggaaattta ggcacattta taggggcacg ccgcgccggc acttgttaac taccgggtgg 600
agtagctttg tgaatcacaa gaagcttgtg gcgggggatt caattgtgtt tttgagggca 660
gaaaaggatg atctgcgtgt tggaattcgg cgggctaaga gggggattgg aattggtgga 720
ggacctgagg ctcctgcagg gtggaattca ggtgggggga ttcgtcctat gccttatgga 780
gggttttcag cttttttgag agaggaagat agccagctct tgagaaatgg gttgagtcca 840
aatgcaaagg ggaaagtgag gcctgaagca gttattgagg ctgcaactct tgctgccaat 900
atgcagccat ttgaggttgt ttactatccc cgggcaagtg ccccagagtt ttgtgtgaag 960
gccaatttag ttagagccgc attgcaggtt aggtggtgtc ctggaatgag gttcaagatg 1020
ccctttgaaa cagaggactc ctcgcggata agctggttta tgggaaccat ctcttctgtt 1080
aactttgctg atccaagatg gcccaactct ccttggagac ttctccaggt tacatgggat 1140
gaaccagagt tacttcaaaa tgtaaaaagg gtgagcccgt ggctggttga aattgtatca 1200
aacatgccta ccattcatct ttcccattac tcaacacaac aaaagaagcc aagattccct 1260
caacacccgg atttttcttt tgatggtcag atttcattgc cagcatttcc cagcaacttt 1320
ctaggtccaa gcaatccgtt tggttgtcta gctgaaagta ctcctgctgg catacaggga 1380
gccaggcatg ctaattatgg tatatcccta tcaaatctcc acttcaataa actgcagtca 1440
ggcctatttc aagctggttt ccctccactt gatcacactg cttccccagt attgagagtc 1500
tcctccaaca atgcagcaac aatgcaaaag gtcggcacgg gtgacaacgt ctcttgctta 1560
ctgtccatgt caactgctac tcaaccttca aagaaagtgg atgatgtgaa ggcaccccaa 1620
ttggtgcttt ttggccaaac aattctcacc gaacagcaaa tttctttgaa cacctctgct 1680
aagacagatc ctactcgaaa taattcattt gatggaaatg ctgataaaat gtgcaagttt 1740
tcagatggtt ttggttatgc tcttcaccca caaggctctt ctcttgagag gttacagtgg 1800
tacaaggatc aacaaaaaga aaccatggct agtttggaga caggtcactg taaagttttt 1860
atggaatctg aagacattgg tcggactatg gatctcacaa tgcttggatc ttatgatgaa 1920
ttgtatagaa agctggcaga catgtttggc atagaaaaat ctgtggtgct aagtcacatg 1980
ctttaccgtg atacaactgg ggcagtcaag cacattggag atgaagcatt cagcgaattt 2040
accaaaactg caaggaggtt gaccattcta atggattcca acagcgatgg tagaggaatc 2100
tag 2103
<210> 2
<211> 700
<212> PRT
<213> Glycine max(Linn.)Merr
<400> 2
Met Leu Phe Gln Glu Phe Ala Val Arg Thr Gly Tyr Cys Met Met Glu
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Ser Lys Glu Lys Leu Lys Glu Val Glu Lys Cys Leu Asp Ser Arg Leu
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Trp His Ala Cys Ala Gly Gly Met Val Gln Met Pro Val Val Asn Ala
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Lys Val Phe Tyr Phe Pro Gln Gly His Ala Glu His Ala Cys Gly Pro
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Val Asp Phe Arg Val Tyr Pro Lys Ile Pro Pro Phe Ile Gln Cys Lys
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Val Gly Ala Ile Lys Tyr Met Ala Asp Pro Glu Thr Asp Glu Val Tyr
85 90 95
Val Lys Leu Arg Leu Val Pro Leu Thr Arg Asn Glu Gly Asp Phe Glu
100 105 110
Asp Asp Ala Val Gly Gly Ile Asn Gly Ser Glu Asn Lys Asp Lys Ser
115 120 125
Pro Ser Phe Ala Lys Thr Leu Thr Gln Ser Asp Ala Asn Asn Gly Gly
130 135 140
Gly Phe Ser Val Pro Arg Tyr Cys Ala Glu Thr Ile Phe Pro Arg Leu
145 150 155 160
Asp Tyr Ser Ala Asp Pro Pro Val Gln Asn Ile Leu Ala Lys Asp Val
165 170 175
His Gly Glu Thr Trp Lys Phe Arg His Ile Tyr Arg Gly Thr Pro Arg
180 185 190
Arg His Leu Leu Thr Thr Gly Trp Ser Ser Phe Val Asn His Lys Lys
195 200 205
Leu Val Ala Gly Asp Ser Ile Val Phe Leu Arg Ala Glu Lys Asp Asp
210 215 220
Leu Arg Val Gly Ile Arg Arg Ala Lys Arg Gly Ile Gly Ile Gly Gly
225 230 235 240
Gly Pro Glu Ala Pro Ala Gly Trp Asn Ser Gly Gly Gly Ile Arg Pro
245 250 255
Met Pro Tyr Gly Gly Phe Ser Ala Phe Leu Arg Glu Glu Asp Ser Gln
260 265 270
Leu Leu Arg Asn Gly Leu Ser Pro Asn Ala Lys Gly Lys Val Arg Pro
275 280 285
Glu Ala Val Ile Glu Ala Ala Thr Leu Ala Ala Asn Met Gln Pro Phe
290 295 300
Glu Val Val Tyr Tyr Pro Arg Ala Ser Ala Pro Glu Phe Cys Val Lys
305 310 315 320
Ala Asn Leu Val Arg Ala Ala Leu Gln Val Arg Trp Cys Pro Gly Met
325 330 335
Arg Phe Lys Met Pro Phe Glu Thr Glu Asp Ser Ser Arg Ile Ser Trp
340 345 350
Phe Met Gly Thr Ile Ser Ser Val Asn Phe Ala Asp Pro Arg Trp Pro
355 360 365
Asn Ser Pro Trp Arg Leu Leu Gln Val Thr Trp Asp Glu Pro Glu Leu
370 375 380
Leu Gln Asn Val Lys Arg Val Ser Pro Trp Leu Val Glu Ile Val Ser
385 390 395 400
Asn Met Pro Thr Ile His Leu Ser His Tyr Ser Thr Gln Gln Lys Lys
405 410 415
Pro Arg Phe Pro Gln His Pro Asp Phe Ser Phe Asp Gly Gln Ile Ser
420 425 430
Leu Pro Ala Phe Pro Ser Asn Phe Leu Gly Pro Ser Asn Pro Phe Gly
435 440 445
Cys Leu Ala Glu Ser Thr Pro Ala Gly Ile Gln Gly Ala Arg His Ala
450 455 460
Asn Tyr Gly Ile Ser Leu Ser Asn Leu His Phe Asn Lys Leu Gln Ser
465 470 475 480
Gly Leu Phe Gln Ala Gly Phe Pro Pro Leu Asp His Thr Ala Ser Pro
485 490 495
Val Leu Arg Val Ser Ser Asn Asn Ala Ala Thr Met Gln Lys Val Gly
500 505 510
Thr Gly Asp Asn Val Ser Cys Leu Leu Ser Met Ser Thr Ala Thr Gln
515 520 525
Pro Ser Lys Lys Val Asp Asp Val Lys Ala Pro Gln Leu Val Leu Phe
530 535 540
Gly Gln Thr Ile Leu Thr Glu Gln Gln Ile Ser Leu Asn Thr Ser Ala
545 550 555 560
Lys Thr Asp Pro Thr Arg Asn Asn Ser Phe Asp Gly Asn Ala Asp Lys
565 570 575
Met Cys Lys Phe Ser Asp Gly Phe Gly Tyr Ala Leu His Pro Gln Gly
580 585 590
Ser Ser Leu Glu Arg Leu Gln Trp Tyr Lys Asp Gln Gln Lys Glu Thr
595 600 605
Met Ala Ser Leu Glu Thr Gly His Cys Lys Val Phe Met Glu Ser Glu
610 615 620
Asp Ile Gly Arg Thr Met Asp Leu Thr Met Leu Gly Ser Tyr Asp Glu
625 630 635 640
Leu Tyr Arg Lys Leu Ala Asp Met Phe Gly Ile Glu Lys Ser Val Val
645 650 655
Leu Ser His Met Leu Tyr Arg Asp Thr Thr Gly Ala Val Lys His Ile
660 665 670
Gly Asp Glu Ala Phe Ser Glu Phe Thr Lys Thr Ala Arg Arg Leu Thr
675 680 685
Ile Leu Met Asp Ser Asn Ser Asp Gly Arg Gly Ile
690 695 700

Claims (7)

1. The GmARF16 gene for coding the soybean ARF transcription factor is characterized in that the nucleotide sequence of the GmARF16 gene is shown as SEQ ID NO. 1.
2. The protein encoded by the GmARF16 gene of claim 1, wherein the amino acid sequence of the protein is shown as SEQ ID No. 2.
3. Use of the gene of claim 1 or the protein of claim 2 to promote the production of root nodules in soybean.
4. A transgenic cell line, a recombinant bacterium, a recombinant vector, an expression vector and a host cell containing the expression vector, which contain the gene of claim 1.
5. The GmARF16 gene editing vector of claim 1.
6. Use of inhibiting the functional expression of the gene of claim 1 or the protein of claim 2 to increase salt resistance in soybean.
7. The use according to claim 6, wherein the salt-tolerant soybean plant is obtained by knocking out GmARF16 gene.
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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114836436A (en) * 2022-04-28 2022-08-02 山东农业大学 Application of soybean gene GmRGS1 and glucose to promoting leguminous plant nodule generation

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WO2014164668A1 (en) * 2013-03-13 2014-10-09 Targeted Growth, Inc. Compositions of methods for increasing seed number, seed weight and/or yield in plants

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WO2014164668A1 (en) * 2013-03-13 2014-10-09 Targeted Growth, Inc. Compositions of methods for increasing seed number, seed weight and/or yield in plants

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NCBI REFERENCE SEQUENCE: XM_006604512.4: "PREDICTED: Glycine max auxin response factor 18 (LOC100791442), mRNA", 《NCBI》 *
李小平等: "大豆生长素响应因子GmARF16参与调节叶片衰老进程", 《中国细胞生物学学报》 *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114836436A (en) * 2022-04-28 2022-08-02 山东农业大学 Application of soybean gene GmRGS1 and glucose to promoting leguminous plant nodule generation
CN114836436B (en) * 2022-04-28 2023-06-02 山东农业大学 Application of soybean gene GmRGS1 and glucose in promotion of root nodule production of leguminous plants

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