CN111166750B - 一种4-氟-2-甲基吲哚类化合物的抗菌新用途 - Google Patents

一种4-氟-2-甲基吲哚类化合物的抗菌新用途 Download PDF

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CN111166750B
CN111166750B CN201811330994.8A CN201811330994A CN111166750B CN 111166750 B CN111166750 B CN 111166750B CN 201811330994 A CN201811330994 A CN 201811330994A CN 111166750 B CN111166750 B CN 111166750B
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罗有福
杨涛
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Abstract

本发明公开了一种4‑氟‑2‑甲基吲哚类化合物的新用途,属于生物医药领域,该类化合物能够显著抑制结核分枝杆菌酪蛋白裂解酶ClpP1P2的活性,同时能够显著抑制结核分枝杆菌以及耻垢分枝杆菌的生长,且对表皮葡萄球菌的生长也表现出一定抑制作用,因此其可用于抗菌领域药物的制备。

Description

一种4-氟-2-甲基吲哚类化合物的抗菌新用途
技术领域
本发明属于生物医药技术领域,特别涉及4-氟-5-羟基-2-甲基吲哚类化合物作为酪蛋白酶裂解酶ClpP抑制剂在抗菌药物领域的应用。
背景技术
致病微生物引起的感染性疾病一直都是危害人类健康的重要因素之一。伴随着抗生素的滥用,多种抗生素耐药菌已经产生。据世界卫生组织WHO统计,全球大约有1/3的人口携带结核分枝杆菌,大约有860万例结核病患者,每年约170万人死于该病,而多药耐药结核(multidrug-resistant tuberculosis, MDR-TB)和广泛耐药结核(extensively drug-resistant tuberculosis, XDR-TB)的出现,为结核病的治疗带来更严峻的挑战。
表皮葡萄球菌是一种革兰阴性的葡萄球菌,一般黏附于人体皮肤和黏膜,是重要的条件致病菌。近年来,随着插管、人工瓣膜、人工关节等医疗移植物的广泛使用,由表皮葡萄球菌(Staphylococcus epidermidis)引起的医院感染日趋严重,其中凝固酶阴性葡萄球菌占医院感染病原中的第 1 位,目前已成为医院感染的重要病原菌之一。由于表皮葡萄球菌分泌的毒性因子较金黄葡萄球菌少,因此表皮葡萄球菌的致病性主要与其在医疗移植物表面形成的生物被膜(Biofilm)有关,它可以抵抗宿主免疫力和增强细菌耐药性,从而导致感染呈现慢性、持续性和反复性的特点,很难治愈,而表皮葡萄球菌对常见抗菌药物耐药率已成为医院感染和临床治疗的棘手问题。因此迫切需要发现全新作用机制的新型抗菌药物来应对临床治疗中的耐药问题。
酪氨酸裂解酶ClpP是一个非常重要且作用机制新颖的抗生素作用靶点,其激动和抑制形式,均能够在不同细菌中发挥其抗菌活性,是一种全新的抗生素机制,为临床治疗中耐药问题的解决带来了希望。
发明内容
本发明要解决的技术问题是发现4-氟-5-羟基-2-甲基吲哚类化合物的抗菌新用途,可用于抗菌药物的制备。为解决上述技术问题,本发明通过如下技术方式实现:本发明中4-氟-5-羟基-2-甲基吲哚类化合物在体外酶活筛选模型上,能够显著抑制结核分枝杆菌酪蛋白裂解酶ClpP1P2活性,因此可作为其抑制剂进行药物制备;此外,抗菌活性测定(MIC)结果显示4-氟-5-羟基-2-甲基吲哚类化合物对结核分枝杆菌以及耻垢分枝杆菌的生长有明显的抑制作用,同时对表皮葡萄球菌的生长也表现出一定的抑制作用,因此,4-氟-5-羟基-2-甲基吲哚类化合物可作为结核分枝杆菌ClpP1P2抑制剂用于抗菌领域的药物制备。
附图说明
图1 是本发明实施例1中不同作用时间及不同浓度的4-氟-5-羟基-2-甲基吲哚类化合物对结核分枝杆菌ClpP1P2酶活的影响。
具体实施方式
以下结合实施例对本发明做进一步阐述。
实施例1 4-氟-5-羟基-2-甲基吲哚类化合物对结核分枝杆菌ClpP1P2酶水平活性影响
本发明自行建立结核分枝杆菌ClpP1P2蛋白活性筛选模型,当有benzoyl-leucine-leucine(Bz-L-L)存在下,ClpP1P2蛋白特异水解带有荧光基团的底物Z-Gly-Gly-Leu-AMC,通过检测该荧光短肽被ClpP1P2水解过程产生的荧光信号的强弱来评价小分子对该酶活性的影响。
1)蛋白样品准备:ClpP1/ClpP2单体以摩尔比1:1混合,加入终浓度为2.5mM B-L-L,室温孵育1h,使ClpP1/ClpP2形成有蛋白酶活性的ClpP1P2异源十四聚体形式。
2)反应体系:向96孔板中依次加入反应缓冲液(0.1M KCl,50mM K2HPO4/ KH2PO4 pH7.6, 5mM MgCl2,5%glycerol)、蛋白溶液、B-L-L以及小分子,最后加入作用底物,反应开始。硼替佐米(Bortezomib)作为阳性对照药,用DMSO溶解为1mM母液,受试药物分别设置100μM 、50μM、25μM、10μM、5μM、2.5μM六个作用浓度,反应体系中DMSO含量控制在3%以内。
3)置于30℃孵育,分别于不同时间点进行荧光强度测定。激发波长为380nm,发射波长为460nm,数据读取前震荡15s。
实验结果:
由附图1所示,不同浓度的4-氟-5-羟基-2-甲基吲哚类化合物对结核分枝杆菌ClpP1P2酶活的抑制水平不同,其抑制作用与药物浓度成依赖关系,在100μM作用浓度下,两个4-氟-5-羟基-2-甲基吲哚类化合物—西地尼布(cediranib)和布立尼布(brivanib)对酶活的抑制作用最优。西地尼布(cediranib)对结核分枝杆菌ClpP1P2体外酶活的抑制作用IC50约为4μM,布立尼布(brivanib)对结核分枝杆菌ClpP1P2体外酶活的抑制作用IC50约为14.1μM,因此判定两个4-氟-5-羟基-2-甲基吲哚类化合物均为结核分枝杆菌ClpP1P2抑制剂,用于抗菌药物的开发。
实施例2 4-氟-5-羟基-2-甲基吲哚类化合物在耻垢分枝杆菌模型最低抑菌浓度(MIC)测定
药物及试剂:受试药物购于MCE,利奈唑胺购于辉瑞,Alamar Blue kit 购于Thermo Fisher Scientific,Middlebrook 7H9、7H11购于Gibco,ADC及OADC购于BD, DMSO购于Sigma。
受试菌株:耻垢分枝杆菌(Mycobacterium smegmatis mc2155),来源于中国科学院广州生物医药与健康研究院。
仪器:酶标仪(Biotek)、紫外分光光度计及恒温摇床(Thermo)。
培养基配制:7H9-ADC培养基:7H9干粉4.7g;加入900mL水含2mL甘油,121℃灭菌10min,待温度降至40℃时,加入100mLADC,4℃保存备用,注意无菌操作。
耻垢分枝杆菌培养:将耻垢分枝杆菌接种到7H9-ADC液体培养基,置于220 rpm/min ,37℃恒温摇床进行培养,当OD600达0.6左右取出,在振荡器上振荡培养物2-3min,使菌分散至乳糜状。
受试药物准备:阳性对照以及受试药物母液稀释至1mM,溶剂为DMSO。
实验步骤:
1)药物配置:取6个无菌EP管,分别加入灭菌7H9-ADC培养液,第一管中加入400μL,其余均加入200μL;采用二倍稀释法配置不同浓度的利奈唑胺溶液,依次为2μg/mL、0.5μg/mL、0.25μg/mL、0.125μg/mL、0.0625μg/mL、0.0312μg/mL;受试药物分别采用培养液稀释成128μg/mL 、64μg/mL、32μg/mL、16μg/mL、8μg/mL、4μg/mL;将稀释后的药液,每孔50μL加入96孔板中,每个浓度设置三个复孔。
2)将试管中的菌液进行OD600计数,稀释至1×105个/mL的浓度进行铺板,每孔加入50μL,边孔加入200μL生理盐水,然后用封口膜封口后置于37℃,孵育
3)48h后,每孔中加入10μL Alamar blue,继续培养2-4h。
4)记录96孔板颜色变化。
实验结果:
表1 受试化合物对耻垢分枝杆菌体外抑制(MIC)范围
Figure DEST_PATH_IMAGE001
从上表可知,4-氟-5-羟基-2-甲基吲哚类化合物对耻垢分枝杆菌具有一定的抗菌活性,具有一定的开发前景。
实施例3 4-氟-5-羟基-2-甲基吲哚类化合物对结核分枝杆菌H37Rv抗菌活性及最低抑菌浓度(MIC)测定
药物及试剂:受试药物购于MEC化合物,利福平(RIF)购于Amerco,Middlebrook7H9、7H11购于Gibco,ADC及OADC购于BD。
受试菌株:结核分枝杆菌株(H37Rv,ATCC27294)(委托同济大学附属上海市肺科医院)。
仪器:摇床,二氧化碳培养箱(Thermo)。
实验步骤:
(1)受试菌株的制备:将受试菌株转入液体培养基,经活化后,于37℃培养2周,吸取培养菌液少许,置于4 mL液体培养基中,加入直径3mm无菌玻璃珠20粒,振荡30s,静止沉淀20min,吸取菌悬液上清,用液体培养基调整比浊至1个麦氏单位,相当于1×107CFU/mL备用。
(2)受试化合物的准备:药物用适量DMSO溶解至1mg/mL,0.22μm滤器过滤。再以液体培养基稀释至所需实验浓度(2×终浓度)。受试化合物终浓度设置如下:0.0625μg/mL、0.125μg/mL、0.25μg/mL、0.5μg/mL、1μg/mL、2μg/mL、4μg/mL、8μg/mL、16μg/mL、32μg/mL、64μg/mL,共11个浓度梯度。对照药物利奈唑胺设置浓度为:0.0039μg/mL、0.0078μg/mL、0.0156μg/mL、0.03125μg/mL、0.0625μg/mL、0.125μg/mL、0.25μg/mL、0.5μg/mL、1μg/mL、2μg/mL、4μg/mL,共11个浓度梯度。
(3)操作步骤:检测时,各取上述化合物溶液100μL,加到96孔微孔板中,再加入104CFU/mL(由107 CFU/mL稀释获得)浓度的菌液100μL,使化合物浓度达到2)设置的终浓度。37℃培养,空白对照组不加任何药物,并接种100%、10%、5%和1%的菌量。同一化合物稀释度设两组组平行对照。观察药物对结核分枝杆菌的最低抑菌浓度(MIC)。
实验结果:
表2 化合物对结核分枝杆菌的体外抑菌作用
序号 化合物 分子量 结核分枝杆菌MIC(μg/mL)
1 利奈唑胺 337.35 0.0625
2 西地尼布 450.5 16
实施例4 4-氟-5-羟基-2-甲基吲哚类化合物对表皮葡萄球菌最低抑菌浓度(MIC)测定
受试菌株:表皮葡萄球菌耐甲氧西林菌株(B27和ATCC12228)
药物及试剂:受试药物购于MCE,利奈唑胺购于辉瑞公司,MHA、MHB培养基购于BD。
仪器:多点接种仪
药物溶液准备:阳性对照药物利奈唑胺用DMSO配置成1mg/mL的溶液,受试化合物用DMSO配置成10mM的母液。
实验步骤 :
采用CLSI推荐的标准琼脂二倍稀释法,从MHA平板挑取单克隆菌于3 mL MHB中,过夜培养。取过夜菌液测OD600,稀释至3 mL MHB中(OD=0.05),37 ℃ 220 rpm/min摇菌至对数生长期(0.4-0.8 OD600),测OD600,调整菌液至1×105 CFU/mL备用。利用多点接种仪,涂板于系列倍比稀释的琼脂平板,37℃静置培养18 h,细菌生长的最小浓度即MIC。
实验结果:
表3 4-氟-5-羟基-2-甲基吲哚类化合物对表皮葡萄球菌体外生长抑制MIC的测定
序号 化合物 分子量 表皮葡萄球菌MIC(μg/mL)
1 利奈唑胺 337.4 1
2 利福平 822.9 0.0625
3 西地尼布 450.5 64
4 布立尼布 441.5 /
从表3可知,4-氟-5-羟基-2-甲基吲哚类化合物对表皮葡萄球菌表现出一定的抑制作用,具有一定的开发前景。

Claims (1)

1.一种结构式如通式I所示的4-氟-5-羟基-2-甲基吲哚类化合物在制备抗菌药物中的用途,其特征在于,所述化合物的结构式中包含4-氟-2-甲基吲哚结构单元,并可抑制革兰氏阳性菌的生长;所述革兰氏阳性菌为结核分枝杆菌、 耻垢分枝杆菌和表皮葡萄球菌;
Figure FDA0003908797230000011
其中R为
Figure FDA0003908797230000012
当R为
Figure FDA0003908797230000013
时,式I所示分子即为西地尼布(cediranib);
当R为
Figure FDA0003908797230000014
时,式I所示分子为布立尼布(brivanib)。
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