CN110295178A - The expression for striking drop cabbage type rape and its parent species MYB43 is improving the application in disease resistance of plant - Google Patents
The expression for striking drop cabbage type rape and its parent species MYB43 is improving the application in disease resistance of plant Download PDFInfo
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Abstract
The invention discloses strike drop MYB43 to improve the application in cabbage type rape and its parent species disease resistance.Cabbage type rape MYB43 gene family includes 4 member genes: BnMYB43-1, BnMYB43-2, BnMYB43-3 and BnMYB43-4, parent species Chinese cabbage, wild cabbage respectively have 2 member genes: BrMYB43-1, BrMYB43-2, BoMYB43-1 and BoMYB43-2.Plant expression vector is interfered by building RNA, is converted in cabbage type rape after double No. 10, transgenic positive plant stalk is obtained and is inoculated with sclerotinite, the scab that transgenosis strikes drop plant as the result is shown significantly becomes smaller, and disease resistance greatly improves;Transgenic plant plant type is smaller, but the yield of land area of one unit rises.The present invention is that MYB43 provides a kind of new method in terms of improving the disease resistance and dense planting high yield of cabbage type rape and its parent species.
Description
Technical field
The present invention relates to gene engineering technology fields, in particular to strike drop MYB43 and improving cabbage type rape and its parent
Application in species disease resistance.
Background technique
Cabbage type rape (Brassica napus, abbreviation rape) belongs to Cruciferae Brassica genus, is the Chinese cabbage by belonging to
(Brassica rapa) doubles to be formed with wild cabbage (Brassica oleracea) by inter-species natural hybrization and genome
Allotetraploid species.Due to natural hybrization and its subsequent at kind of process, only millennia, full-length genome are surveyed
Sequence etc. is studies have shown that rape gathers around the sum of a full set of genome there are two parent species (Chinese cabbage, wild cabbage), and exists with parent species
Corresponding intergenic sequence is almost consistent or height is similar.Rape and its parent species Chinese cabbage and wild cabbage are global important oil
Material, vegetables, feed and ornamental plant.Worldwide, the Brassica genus such as rape, Chinese cabbage, wild cabbage or even entire Cruciferae are made
In the production of object, by the harm of a variety of biologies and inanimate environment stress, wherein sclerotiniose occurs universal, and harm is huge,
Sclerotiniose causes yield of rape to lose 10%-80%.
Myb transcription factor superfamily is of great significance for plant growth and development and adaptability, but overwhelming majority MYB base
The Unknown Function of cause.For MYB43, it is special to pertain only to its a small amount of expression for having been reported in cruciate flower mesh plant at present
Reference breath, AtMYB43 is expressed in the fiber of development in arabidopsis, and AtMYB43 promoter can be by dimension pipe developmental regulation
The combination of factors A tMYB46.In the plant other than cruciate flower mesh, poplar PtrMYB152 is the homologous base of arabidopsis AtMYB43
Cause thickens stalk xylem after its overexpression, and secondary cell wall thickeies, and content of lignin increases.
But in entire plant kingdom so far, still shortage MYB43 and plant height, branch, plant type, lodging resistance, seed are produced
The research of relationship between the characters such as amount, plant disease resistance is reported, the report of its molecular breeding application aspect is more lacked.For packet
For the MYB43 gene for including the crucifer including arabidopsis, rape, Chinese cabbage, wild cabbage, has no genetically modified plants function and grind
The report studied carefully.
Summary of the invention
In view of this, one of the objects of the present invention is to provide the tables for striking drop cabbage type rape and its parent species MYB43
Up to improving the application in disease resistance of plant, the second purpose, which is to provide, strikes drop cabbage type rape and its parent species MYB43
It expresses and is reducing the application in cabbage type rape or its parent species stem sclerotinite scab length;The third object of the present invention exists
Cabbage type rape or its parent species unit plane are being improved in providing the expression for striking drop cabbage type rape and its parent species MYB43
Application in product yield.
In order to achieve the above objectives, the invention provides the following technical scheme:
1, the expression for striking drop cabbage type rape and its parent species MYB43 is improving the application in disease resistance of plant, described
The full length cDNA sequence of cabbage type rape MYB43 family be SEQ ID NO.25, SEQ ID NO.26, SEQ ID NO.27 and
Shown in SEQ ID NO.28, the full length cDNA sequence of parent species Chinese cabbage MYB43 family is SEQ ID NO.29, SEQ ID
Shown in NO.30, the full length cDNA sequence of parent species wild cabbage MYB43 family is shown in SEQ ID NO.31, SEQ ID NO.32.
Preferably, the overall length gDNA sequence of cabbage type rape MYB43 family is SEQ ID NO.33, SEQ ID
Shown in NO.34, SEQ ID NO.35 and SEQ ID NO.36, the overall length gDNA sequence of parent species Chinese cabbage MYB43 family is SEQ
Shown in ID NO.37, SEQ ID NO.38, the overall length gDNA sequence of parent species wild cabbage MYB43 family be SEQ ID NO.39,
Shown in SEQ ID NO.40.
Preferably, the method for striking drop MYB43 is, for cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family, building
Then the transformant of acquisition is converted cabbage type rape or its parent species by rna interference vector, obtain the plant for striking drop MYB43.
Preferably, rna interference vector 602-1081bp as shown in SEQ ID NO.25, shown in SEQ ID NO.26
604~1084bp, SEQ ID NO.27 shown in 606~1086bp, SEQ shown in 578~1058bp, SEQ ID No.28
602~1081bp shown in ID No.29,597 shown in 580~1060bp, SEQ ID No.31 shown in SEQ ID No.30
The CaMV35S of the antisense fragments insertion pFGC5941M carrier of 604~1084bp shown in~1077bp, SEQ ID No.32 is opened
It is obtained between mover and BnPAP2 Intron II;
Or 602-1081bp shown in SEQ ID NO.25,604~1084bp, SEQ ID shown in SEQ ID NO.26
578~1058bp shown in NO.27,602 shown in 606~1086bp, SEQ ID No.29 shown in SEQ ID No.28~
580~1060bp shown in 1081bp, SEQ ID No.30,597~1077bp, SEQ ID shown in SEQ ID No.31
The sense fragment of 604~1084bp shown in No.32 be inserted into pFGC5941M BnPAP2 Intron II and OCS 3 ' it
Between, form RNAi carrier pFGC5941M-BMYB43I.
Preferably, the transformant is the Agrobacterium tumefaciems engineered strain containing the rna interference vector.
Preferably, shown plant is cabbage type rape, Chinese cabbage or wild cabbage.
2, the expression for striking drop cabbage type rape and its parent species MYB43 is reducing cabbage type rape or its parent species stem
Application in bar sclerotinite scab length, the full length cDNA sequence of cabbage type rape MYB43 family be SEQ ID NO.25,
Shown in SEQ ID NO.26, SEQ ID NO.27 and SEQ ID NO.28, the full-length cDNA sequence of parent species Chinese cabbage MYB43 family
It is classified as shown in SEQ ID NO.29, SEQ ID NO.30, the full length cDNA sequence of parent species wild cabbage MYB43 family is SEQ ID
Shown in NO.31, SEQ ID NO.32.
3, the expression for striking drop cabbage type rape and its parent species MYB43 is improving cabbage type rape or its parent species list
Application in the area output of position, the full length cDNA sequence of cabbage type rape MYB43 family are SEQ ID NO.25, SEQ ID
Shown in NO.26, SEQ ID NO.27 and SEQ ID NO.28, the full length cDNA sequence of parent species Chinese cabbage MYB43 family is SEQ
Shown in ID NO.29, SEQ ID NO.30, the full length cDNA sequence of parent species wild cabbage MYB43 family be SEQ ID NO.31,
Shown in SEQ ID NO.32.
In the present invention, cabbage type rape explant kind is double tenth-seededs in commercial variety, and the explant is sterile
Seedling hypocotyl section.
In the present invention, the index for improving cabbage type rape and its parent species disease resistance is to connect to transgenic plant stalk
Kind sclerotinite, scab is significantly smaller than non-transgenic (control) plant, and disease resistance significantly improves.
In the present invention, changing Growth and development index is that plant is slightly short, and branch is less slightly slightly short, and blade is smaller, and single plant yield omits
There is decline.But it can be resistant to dense planting, can increase the grain yield in land area of one unit after appropriate increase density.
The beneficial effects of the present invention are: the present invention provides in cabbage type rape and its parent species Chinese cabbage, wild cabbage
Member gene's number, full length sequence, the coding protein specificity, evolutionary relationship of MYB43 family, and confirmed suitably to strike drop MYB43 man
The expression of race can be such that the disease resistance of plant significantly increases, and yield increases after rational close planting.
Detailed description of the invention
In order to keep the purpose of the present invention, technical scheme and beneficial effects clearer, the present invention provides following attached drawing and carries out
Illustrate:
Fig. 1 is the electrophoretogram (M:DNA of cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family full-length cDNA amplification
marker;1~8 respectively represents BnMYB43-1, BnMYB43-2, BnMYB43-3, BnMYB43-4, BrMYB43-1, BrMYB43-
2, the PCR amplification band of the full-length cDNA of BoMYB43-1 and BoMYB43-2).
Fig. 2 be cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family overall length gDNA amplification electrophoretogram (M:DNA
marker;1~8 respectively represents BnMYB43-1, BnMYB43-2, BnMYB43-3, BnMYB43-4, BrMYB43-1, BrMYB43-
2, the PCR amplification band of the overall length gDNA of BoMYB43-1 and BoMYB43-2).
Fig. 3 is the secondary structure of cabbage type rape, Chinese cabbage, wild cabbage MYB43 family member's albumen;Longitudinal 4 from long to short
Kind line segment respectively indicates α spiral, extended chain, β-bend and random coils.The amino acid residue of digital representation albumen counting (A~
H successively represents BnMYB43-1, BnMYB43-2, BnMYB43-3, BnMYB43-4, BrMYB43-1, BrMYB43-2, BoMYB43-
The secondary structure of 1 and BoMYB43-2 albumen).
Fig. 4 be cabbage type rape, Chinese cabbage, wild cabbage MYB43 family member's albumen tertiary structure (A~H is successively represented
BnMYB43-1, BnMYB43-2, BnMYB43-3, BnMYB43-4, BrMYB43-1, BrMYB43-2, BoMYB43-1 and
The tertiary structure of BoMYB43-2 albumen).
Fig. 5 is the system hair of cabbage type rape, Chinese cabbage, wild cabbage MYB43 family member and part arabidopsis myb transcription factor
Raw relationship.
Fig. 6 is the organ specificity of cabbage type rape, Chinese cabbage, wild cabbage MYB43 family transcriptional expression.
Fig. 7 is the expression characteristic that cabbage type rape MYB43 family responds sclerotinite induction.
Fig. 8 is building (the A:RNA interference table of cabbage type rape and its parent species MYB43 family rnai expression carrier
Up to electropherogram;B:RNA interference expression vector structure chart).
Fig. 9 is for the PCR identification of 3 optimal transgenic lines and its compared with adjoining tree expression, wherein 1,2,3
The transgenic line for striking drop MYB43 gene family is respectively indicated, the top (A) primer sets are combined into RBMYB43I+RBnPAP2I2, (A)
Lower part primer sets are combined into FBMYB43I+ROCST5N, and primer sets are combined into FBMYB43RT+RBMYB43RT in (B).
Figure 10 is the variation of transgenic plant yield.
Figure 11 is the variation (A: stalk scab result figure of transgenic plant disease resistance;B: stalk scab length sequences).
Specific embodiment
Hereinafter reference will be made to the drawings, and a preferred embodiment of the present invention will be described in detail.It is not specified in preferred embodiment
The experimental method of actual conditions, usually according to normal condition, such as Molecular Cloning:A Laboratory guide (third edition, J. Pehanorm Brooker
Deng writing, Huang Peitang etc. translated, Science Press, 2002) described in condition, or according to the normal condition proposed by manufacturer.
The vegetable material that preferred embodiment uses: 821 (ZY821) of oil in cabbage type rape, in pairs No. 10 (ZS10) be
Commercial variety, conventional field test condition plantation, bagging selfing are reserved seed for planting.
The reagent and kit that preferred embodiment uses: EASYspin plant RNA rapidly extracting kit is rich purchased from Beijing
Mai De Bioisystech Co., Ltd;PrimeScript RT Reagent Kit with gDNA Eraser(Perfect Real
Time) reverse transcription reagent box is purchased from Dalian TaKaRa company;Fluorescence quantitative kit FastStart Essential DNA
Green Master is purchased from Roche company;Various restriction enzyme NcoI, AatII, BamHI and XbaI etc. are Lithuania MBI
Fermentas Products;Murashige&Skoog (MS) culture medium is purchased from Duchefa company, Holland;GoldView nucleic acid dye
Material is purchased from Beijing SBS Genetech gene technology Co., Ltd;CTAB, TE buffer, DNA Loading Buffer, rifampin
(Rif), streptomysin (Str), kanamycins (Kan), ampicillin (Amp), Cefotaxime Sodium (Cef), agarose, tryptose
Peptone, yeast extract, Basta herbicide and other reagents are purchased from Shanghai Sangon Biological Engineering Technology And Service Co., Ltd.
The key instrument that preferred embodiment uses: 9700 type PCR instrument of Applied Biosystems company, U.S. ABI,
Bio-Rad CFX96 TouchTMFluorescence quantitative PCR instrument;And molecular biology and plant genetic engineering other conventional instruments,
Equipment and facility.
Embodiment 1, cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family clone
This research the primer is shown in Table 1.
Table 1, this research the primer
1, the extraction of cabbage type rape, Chinese cabbage, wild cabbage genome DNA and total serum IgE
Each strain takes the tender leaf of typical plant, and it is total to extract genome using cetyltrimethylammonium bromide (CTAB) method
DNA, using the quality and concentration of 1.0% agarose gel electrophoresis method and spectrophotometry evaluation nucleic acid samples.Meanwhile with wild cabbage
The root of type rape variety ZY821, stem, leaf, flower, the seed of Hua Hou 30d, Hua Hou 20d pod skin be material, it is a small amount of using pillar
Plant total serum IgE extraction agent box by specification extracts total serum IgE, removes DNA impurity with DNase I, is dissolved in after total serum IgE ethanol precipitation
Pure water.Nucleic acid samples detect quality using 1% agarose gel electrophoresis, are measured with Nanodrop 2000C ultraviolet specrophotometer
Concentration and purity.
Electrophoresis result shows that the cabbage type rape extracted with CTAB method, Chinese cabbage, the integrality of wild cabbage genome DNA are good,
Completely, the purity of spectrophotometry is also higher, can be used for PCR amplification and Southern hybrid experiment for RNA digestion.Electrophoresis point
Analysis shows that the total serum IgE characteristic bands of acquisition are clear, no obvious RNA degradation and DNA pollution, the matter of spectrophotometry evaluation
Amount is also preferable, can satisfy the requirement of downstream experiment.
2, the acquisition of total the first chain of cDNA of each organ of cabbage type rape, Chinese cabbage, wild cabbage
The PrimeScript RT Reagent Kit of TaKaRa company will be used after the RNA mixed in equal amounts mentioned in above-mentioned 1
With gDNA Eraser (Perfect Real Time) reverse transcription reagent box, obtains each device of cabbage type rape, Chinese cabbage, wild cabbage
Total the first chain of cDNA of official.
3, the electronic cloning of cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family
Arabidopsis MYB43 gene (AtMYB43) be located at No. 5 chromosomes (AT5G16600) on, cDNA (AT5G16600)
For 1329bp.Its cDNA sequence is submitted on the website NCBI (http://www.ncbi.nlm.nih.gov/BLAST/) and is carried out
Nucleic acid sequence alignment (nucleotide blast), inputted respectively in Organism Brassica napus (taxid:
3708), Brassica rapa (taxid:3711) and Brassica oleracea (taxid:3712), is selected in Database
Others and Reference RNA sequence (refseq-rna) is selected, selects Somewhat in Optimize for
Similar sequences (blatsn) then clicks BLAST and is compared, and comparison result shows in GenBank only two
The DNA homolog score value for annotating into the gene order of BnMYB43 is higher, and 4 annotations are same at the gene of the sequence of other rapeseed genes
Source score value is higher, and 2 annotations are higher at the DNA homolog score value of the sequence of other Chinese cabbage genes, and 2 annotations are at other wild cabbage bases
The DNA homolog score value of the sequence of cause is higher, they are created sequence and is compared to arabidopsis website, finds this 10 sequences
It is the orthologous genes of AtMYB43, they is subjected to multiple alignment discovery, they are divided into four groups.So speculating Wild cabbage type
Rape, Chinese cabbage, wild cabbage are respectively present 4,2 and 2 MYB43 genes, and corresponding separate gene is respectively designated as BnMYB43-
1, BnMYB43-2, BnMYB43-3, BnMYB43-4, BrMYB43-1, BrMYB43-2, BoMYB43-1 and BoMYB43-2.
4, the clone of cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family full-length cDNA
Respectively using cabbage type rape, Chinese cabbage, total the first chain of cDNA of wild cabbage mixing organ as template, with primer listed by table 1
Combination carries out PCR amplification, and the agarose gel electrophoresis of pcr amplification product is shown, primer combines FBrMYB43-1+RBrMYB43-
1, FBrMYB43-2+RBrMYB43-2, FBoMYB43-1+RBoMYB43-1 and FBoMYB43-2+RBoMYB43-2 are amplified
The band (Fig. 1) of 1 treaty 1200bp.After glue recycling, TA clone, the bacterium solution PCR detection of Batch Clone shows Insert Fragment
There is polymorphism in length, equal sample presentation sequencing, the BLASTn of sequencing result and to show them with the comparison of AtMYB43 be sweet
The MYB43 gene of blue type rape and its parent species, the length point for the standard full-length cDNA that the band sequencing of 8 1200bp obtains
Not Wei 1235bp, 1236bp, 1199bp, 1217bp, 1235bp, 1202bp, 1242bp and 1215bp, be respectively designated as
BnMYB43-1 mRNA、BnMYB43-2 mRNA、BnMYB43-3 mRNA、BnMYB43-4 mRNA、BrMYB43-1 mRNA、
BrMYB43-2 mRNA, BoMYB43-1 mRNA and BoMYB43-2 mRNA, nucleic acid sequence such as SEQ ID NO.25~SEQ
Shown in ID NO.32.
5, cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family gDNA sequence clone
Template is substituted for cabbage type rape, Chinese cabbage, wild cabbage genome DNA, carries out PCR amplification as before,
Electrophoresis result shows that primer combines FBrMYB43-1+RBrMYB43-1, FBrMYB43-2+RBrMYB43-2, FBoMYB43-1+
RBoMYB43-1 and FBoMYB43-2+RBoMYB43-2 has amplified the band (Fig. 2) of 1 treaty 2250bp.Glue recycling, TA grams
After grand, bacterium solution PCR detects no polymorphism, be sequenced acquisition exact length be respectively 2293bp, 2252bp, 2237bp,
2256bp, 2295bp, 2240bp, 2259bp and 2258bp, be respectively designated as BnMYB43-1 gene, BnMYB43-2 gene,
BnMYB43-3 gene, BnMYB43-4 gene, BrMYB43-1 gene, BrMYB43-2 gene, BoMYB43-1 gene and
BoMYB43-2 gene, nucleic acid sequence is as shown in SEQ ID NO.33~SEQ ID NO.40.
Embodiment 2, cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family bioinformatic analysis
Sequence alignment, open reading frame (ORF) lookup and translation are carried out on Vector NTI Advance 11.5,
The CDD search that BLAST and protein sequence are carried out on the website http://www.ncbi.nlm.nih.gov/, in http: //
The websites such as bip.weizmann.ac.il/ and www.expasy.org provide and carry out protein on the bioinformatics website linked
Structural analysis, in http://prodes.toulouse.inra.fr/multalin/multalin.html and http: //
Gene and protein sequence multiple alignment and clustering are carried out on the websites such as www.ebi.ac.uk/clustalw/.
1, the structural analysis of cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family
(1) structural parameters of cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family
Cabbage type rape, Chinese cabbage, 8 full-length genes of wild cabbage MYB43 family DNA sequence dna be 2237-2295bp, have 3
A exon and 2 intrones, longest standard mRNA are 1242bp, and 5 ' noncoding region of longest (5 ' UTR) is 126bp, longest
3 ' UTR are 226bp, and coding amino acid is 304-329 (table 2).
Table 2, cabbage type rape, Chinese cabbage, wild cabbage MYB43 gene family structure and nucleic acid profile
(2) cabbage type rape, Chinese cabbage, the basic parameter of wild cabbage MYB43 family protein, subcellular localization and possible transcription
After modify
8 cabbage type rape, Chinese cabbage, wild cabbage MYB43 family albumen of derivation have 304-329 amino acid residue, molecule
Amount is 37.67-37.72kD, and isoelectric point is 6.9, and Charged acids account for 31.77-32.16%, and acidic amino acid accounts for 10.41-
10.42%, basic amino acid accounts for 11.38-11.39%, and polar amino acid accounts for 37.4-37.76%, and hydrophobic amino acid accounts for 26.68-
26.71%, be basic protein, with leucine content highest, followed by threonine in single amino acids, followed by asparagine or
Serine.
SignalP5.0 predicts that they do not have signal peptide.Softberry-ProComp, WoLFPSORT and Plant-mPLoc
Predict that they are positioned at nucleus;TMpred predicts that they do not have any transmembrane domain.It is multiple that NetPhos 3.1 predicts that they have
Potential phosphorylation site, mainly Ser-phosphorylation site (table 3).
Table 3, cabbage type rape, Chinese cabbage, wild cabbage MYB43 family coding albumen essential characteristic
3 (Continued) of table
(3) conservative domain, conserved motifs and the higher structure of cabbage type rape, Chinese cabbage, wild cabbage MYB43 family protein
NCBI guards domain search (NCBI Conserved Domain Search) and shows cabbage type rape, Chinese cabbage, wild cabbage
8 albumen of MYB43 family are that SANT guards domain.
SOPMA software prediction, their secondary structure are mainly random coils (37.7-44.08%), followed by alpha-helix
(33.2-36.4%) and extended chain (14.47-18.24%), β-corner (5.59-9.27%) (table 3, Fig. 3).
Swiss-Model predicts their gross three-dimensional structures (Fig. 4).
2, cabbage type rape, Chinese cabbage, wild cabbage MYB43 family homology and phylogenetic relationship
(1) homology of nucleic acid and protein level
Comparison two-by-two on Vector NTI Advance 11.5 shows cabbage type rape, Chinese cabbage, wild cabbage MYB43 family
In the horizontal concordance rate of gDNA be 65.7%~99.6% between 8 full-length genes, the concordance rate of code area level for 83.1~
99.9%, the consistency and similitude for encoding protein level are respectively 71.9~99.4% and 76%~99.7% (table 4).In core
Sour water is flat, their yet further myb genes have certain homology.Their conservatives in code area are significantly higher than noncoding region
Conservative, but introne in montage boundary be it is conservative, there is also the partial zones of some conservatives in 5 ' UTR and 3 ' UTR
Domain, should be related with gene expression activity.In protein level, they also have certain homology (figure with many other MYB albumen
5)。
Table 4, cabbage type rape, Chinese cabbage, wild cabbage MYB43 family's nucleic acid and protein sequence homologies (%)
Note: gDNA concordance rate (italic, on), code area concordance rate (italic, under), albumen concordance rate (roman, on) and egg
White likelihood (roman, under)
(2) phylogenetic relationship
What BLASTp was shown has the arabidopsis MYB albumen of similitude to download with cabbage type rape, Chinese cabbage, wild cabbage MYB43,
Clustal W multiple ratio is utilized on Vector NTI Advance together with cabbage type rape, Chinese cabbage, wild cabbage MYB43 albumen
Pair and construct genealogical tree (Fig. 5).Cabbage type rape, Chinese cabbage, wild cabbage MYB43 albumen and arabidopsis MYB43 are disclosed on genealogical tree
Gather first for one kind, shows that cabbage type rape, Chinese cabbage, wild cabbage MYB43 albumen are the orthologous genes of AtMYB43
(orthologs)。
The relationship of embodiment 3, cabbage type rape MYB43 family's expression characteristic and anti-sclerotiniose
Select the pod of the root of oil 821, stem, leaf, flower, the seed of Hua Hou 30d, Hua Hou 20d in cabbage type rape commercial variety
6 histoorgans of pericarp and blade inoculation sclerotinite 0h, 0.5h, 3h, 9h, 2cm is organized around scab for 24 hours and after 48h
For RNA sample as template, it is total for using PrimeScript RT Reagent Kit with gDNA Eraser reverse transcription
CDNA, with the sense of organization specificity of fluorescence real-time quantitative PCR (qRT-PCR) analysis MYB43 gene family expression.It is combined with primer
FBMYB43RT+RBMYB43RT detects the overall expression level of MYB43 gene in each organ.Primer combines FBrMYB43-1RT+
RBrMYB43-1RT, FBoMYB43-1RT+RBoMYB43-1RT, FBrMYB43-2RT+RBrMYB43-2RT and FBoMYB43-
2RT+RBoMYB43-2RT is respectively used to detection member gene BnMYB43-1, BnMYB43-2, BnMYB43-3 and BnMYB43-4
Expression.Reaction in 25 μ l standard FastStart Essential DNA Green Master-PCR systems into
Row, the program of PCR reaction is all are as follows: 95 DEG C of initial denaturation 10min → 45 amplification cycles (95 DEG C of denaturation 10s → 60 DEG C/62 DEG C annealing
30s) → 65 DEG C to 95 DEG C of melting curve.
QRT-PCR the result shows that, BnMYB43 totality and its family member have expression in the above organ, but in stem, root
Expression quantity be significantly larger than other organs (Fig. 6).In addition, the expression of BnMYB43 is lowered rapidly after being inoculated with sclerotinite 3h, explanation
BnMYB43 participates in rape and sclerotinite Interaction (Fig. 7).
Embodiment 4 strikes the application of drop rape and its parent species MYB43 gene family in raising disease resistance
1, the clone of rape, Chinese cabbage, wild cabbage MYB43 gene family RNA interference fragment
Cabbage type rape ZY821 is used to mix total cDNA for template, using primer combination FBMYB43I+RBMYB43I amplification
The interference fragment BMYB43I of BMYB43 gene family out, the product clip size of electrophoresis showed are identical as expection (Fig. 8, A).It will
It is separately recovered, and connect with pMD 19-T, converts DH5 α, selects the monoclonal bacterium solution sequencing of the PCR positive, as the result is shown
The length of BMYB43I is 505bp, 602-1081bp shown in respectively SEQ ID NO.25, shown in SEQ ID NO.26
578~1058bp shown in 604~1084bp, SEQ ID NO.27,606~1086bp, SEQ shown in SEQ ID No.28
602~1081bp shown in ID No.29,597 shown in 580~1060bp, SEQ ID No.31 shown in SEQ ID No.30
604~1084bp shown in~1077bp, SEQ ID No.32, without prominent compared with the full length cDNA sequence of the gene family
Become.
2, the building of rape, Chinese cabbage, wild cabbage MYB43 gene family RNAi interference carrier
BMYB43I antisense fragments are subcloned into CaMV 35S in pFGC5941M using the complete double digestion of NcoI+AatII and open
Between mover and BnPAP2 Intron II, BMYB43I sense fragment is subcloned into using the complete double digestion of BamHI+XbaI
In pFGC5941M between BnPAP2 Intron II and OCS 3 ', formed RNAi carrier pFGC5941M-BMYB43I (Fig. 8, B).
DH5 α is converted, the clone of anti-Kan is obtained, is combined through each primer carry out PCR detection respectively, positive clone molecule extracts plasmid
After convert agrobacterium tumefaciens lba4404, PCR positive clone molecule is engineered strain.
3, mediated by agriculture bacillus pFGC5941M-BMYB43I converts rape commercial variety
In the present invention, it is used equally for improving after pFGC5941M-BMYB43I conversion rape, Chinese cabbage, wild cabbage and other plants
Disease resistance, this preferred embodiment have selected conversion cabbage type rape as representing, convert the application principles of other species with it is such
Seemingly.
All tissue cultures operations carry out under the conditions of the Plant Tissue Breeding of standard, between superclean bench, culture, tame and docile
Clean rank between change is respectively 100 grades, 10000 grades and 100000 grades, and corresponding reagent, material, vessel press regulation and carry out nothing
Bacterium processing.In after double tenth-seededs impregnate 1~2h in clear water, with after 75% ethyl alcohol surface sterilization 1min with aseptic water washing 3
It is secondary, 15min then is impregnated with 0.1% mercuric chloride, sterile water is repeatedly rinsed well, and MS solid medium [MS powder is then inoculated in
4.41g/L+Phytagel 2.6g/L+ sucrose 30.0mg/L, pH5.8, autoclave, which warms, to sterilize;It is liquid that Phytagel, which is not added,
Body culture medium] on, 25 DEG C, 2000Lux illumination, 16h/d photoperiod cultivate that (condition of culture is except especially indicating person between subsequent tissue culture
Outside, it is identical with this).The hypocotyl for cutting seedling age 8 days or so aseptic seedlings is cut into the segment for being about 0.5~1.0cm, is inoculated into pre-
Train culture medium MSp [MS culture medium+1.0mg/L 6- benzylaminopurine (6-BA)+1.0mg/L 2,4 dichloro benzene ethoxyacetic acid
(2,4-D)] on preculture 3 days.
The engineered strain of -80 DEG C of preservations is in the LB added with 100.0mg/L Kan+20.0mg/L Str+40.0mg/L Rif
In 28 DEG C, 250r/min shaken cultivation 1~2 day in fluid nutrient medium, Agrobacterium is made to grow to logarithmic phase, switching culture is primary.
Thalline were collected by centrifugation for 5000rpm, 10min room temperature, with dip dyeing culture medium MSm [MS fluid nutrient medium+1.0mg/L 2,4- dichloro-benzenes
+ 100 μM of acetosyringones (AS) of ethoxyacetic acid (2,4-D)+1.0mg/L 6- benzylaminopurine (6-BA)] adjust bacterial concentration
To OD600About 0.5 or so, as dip dyeing liquid for shell.
Hypocotyl section after preculture is immersed into 5-10min in dip dyeing liquid for shell, during which intermittence is gently swayed, then by small embryo
Shaft part blots extra bacterium solution on sterilizing paper, is inoculated into total training culture medium MSc [MS solid medium+1.0mg/L 6-BA+
1.0mg/L 2,4-D+50 μM of AS] in, 23.5 DEG C dark culture 48 hours.With sterilizing liquid culture medium MSk [MS fluid nutrient medium+
1.0mg/L 2,4-D+1.0mg/L 6-BA+500mg/L cephalosporin (Cef)] washing by soaking 3 × 10min of explant, with sterilizing
Paper blots surface liquid, is transferred to induction screening and culturing medium MSi [MS solid medium+1.0mg/L 6-BA+1.0mg/L2,4-D
+ 500mg/L Cef+15ppm Basta] in culture, about 2 weeks subcultures 1 time until growing macroscopic kanamycin-resistant callus tissue, then transfer
To differential medium MSd [MS solid medium+4.0mg/L 6-BA+2.0mg/L zeatin (ZT)+5.0mg/L AgNO3+
500mg/L Cef+15ppm Basta] middle culture 14 days or more, evoked callus differentiates budlet, then is transferred to stem differentiation
Culture in culture medium MSs (MS solid medium+3.0mg/L 6-BA+2.0mg/L ZT+500mg/L Cef+10ppm Basta)
To growing small stem, then it is transferred to long shoot culture medium MSe (M solid medium+0.05mg/L 6-BA+500mg/L Cef+10ppm
Basta it cultivates in) to the complete stem piece of length, then is transferred to root media MSr [MS solid medium+2mg/L methyl α-naphthyl acetate
(NAA)] to flourishing root system is grown, the seedling after taking root is transplanted to after taming containing sterilizing perlite, vermiculite, grass for culture in
In the basin alms bowl of charcoal soil (mass ratio 1:1:1) mixture, it is managed by greenhouse pot culture, finally obtains transgenic regenerated plant.
Meanwhile using double No. 10 regeneration plants in being obtained under the identical condition of tissue culture of no Basta screening pressure as non-transgenic
Negative control.
4, the identification of transgenic plant
(1) Basta of transgenic plant rechecks identification
The Basta solution for being 200ppm with concentration apply at dye to the blade of transgenic regenerated plant and adjoining tree
Reason.
(2) the PCR identification of transgenic plant
The blade of transgenic regenerated plant and negative control plant is taken respectively, genome DNA is extracted, using RBMYB43I
This 2 pairs of primer combinations of+RBnPAP2I2 and FBMYB43I+ROCST5N carry out composite PCR detection.Positive transgenic regeneration plant exists
Under the detection of 2 kinds of primers combination, it can expand and positive control (CK+, engineered strain) band of a size, and negative control
Plant (WT) is then without band (Fig. 9).
5, the screening of the investigation of transgenic plant character and ideal strain
For transgenic plant compared with non-transgenic adjoining tree, some changes are had occurred in the agronomy form of transgenic plant
Change: transgenic plant is slightly short, branch amount it is less slightly it is slightly short, blade is smaller, single plant yield is declined slightly, but properly increase planting density
Yield goes up not down (Figure 10) afterwards.Stalk in the middle part of full-bloom stage is taken, counts stalk scab length after Vitro Inoculation Technique sclerotinite 96h.Root
As a result, it has been found that, scab is significantly smaller (Figure 11) than non-transgenic (control) plant according to statistics.
It is detected, is found excessively short and small using expression of the qRT-PCR to MYB43 family in transgenic plant stem
Strain in MYB43 family expression also very low i.e. RNA jamming effectiveness highest, and plant type is suppressed in the low plant of degree
RNA jamming effectiveness is relatively low.On the contrary, qRT-PCR is also shown that the expression of MYB43 family and disease resistance are negatively correlated, i.e.,
The more high then disease resistance of RNA jamming effectiveness is stronger, and the more weak then disease resistance of RNA jamming effectiveness is weaker.It will be apparent that as a regulation base
Cause, MYB43 are in the crossing on node of vine growth and development and disease resistance, and vine growth and development and disease resistance are two of balance
Weights, and MYB43 is then the equalization point of balance.Then, the present invention comprehensively considered jamming effectiveness, disease resistance and plant type three it
Between balance, from numerous transgenic lines find MYB43 family RNA jamming effectiveness it is significant in 20%-50% or so, disease resistance
Enhancing, plant type slightly become smaller but the strain of energy dense planting volume increase is as ideal strain, and interfere excessively high and too low strain to give up those
It abandons.
These results explanation can significantly improve the disease resistance of plant, slightly become smaller after suitably striking the expression for dropping MYB43
Plant type in the case where properly increasing planting density have crop field yield potential.
Other explanations of application form
1, the gene and its segment in the present invention also includes coming from other than nucleotide sequence listed in sequence table
In the MYB43 gene order of rape, Chinese cabbage, other subspecies, the ecotype or the kind of wild cabbage and other nearly edge species, although it
May have small difference with nucleotide sequence listed in sequence table.
2, the gene and its segment in the present invention, other than nucleotide sequence listed in sequence table, also include and it
Have any nucleotide sequence of 98.00% or more consistency in continuous 80bp or more.
3, interference expression vector constructed in the present invention, in addition to the conversion pFGC5941M- as being lifted in preferred embodiments
Other than BMYB43I, converting any one other carrier also can get similar effect.
4, the gene and its segment in the present invention, in addition to as lifted in preferred embodiments for cabbage type rape, Chinese cabbage,
Other than wild cabbage, other species can also be applied to.
5, the gene and its segment in the present invention, in addition to disease-resistant using RNA interference enhancing as what is lifted in preferred embodiments
Property and change plant type, similar effect can also be obtained using the technologies such as antisense RNA, CRES-T.
6, the gene and its segment in the present invention, in addition to being carried as what is lifted in preferred embodiments using pFGC5941M
Other than body building, also to carry out vector construction using other platform carriers;Vector construct in the present invention, in addition to as preferential
Other than the improvement leaf disk method mediated using agrobacterium tumefaciens lba4404 lifted in embodiment is converted, it can also be used
Its method carries out Plant Transformation.
7, drop is struck by the MYB43 family in the present invention, neither from chromosome knock out all MYB43 genes completely,
Nor the expression of entire MYB43 family is carried out 100% or the silencing close to 100%, although because such disease resistance
Increase stronger, but growth and development is exceedingly inhibited, plant is excessively short and small and influences yield.The purpose of the present invention is suitably drop
The expression of low MYB43 family, i.e. RNA jamming effectiveness is in 20%-50% or so.Therefore, obtained multiple independences are turned
Gene strain needs the screening by qRT-PCR, identifies to disturb efficiency and suitably strike and drops strain as ideal strain, interference effect
The too low and excessively high strain of rate is intended to give up.
Embodiment described above is only to absolutely prove preferred embodiment that is of the invention and being lifted, protection model of the invention
It encloses without being limited thereto.Those skilled in the art's made equivalent substitute or transformation on the basis of the present invention, in the present invention
Protection scope within.Protection scope of the present invention is subject to claims.
Sequence table
<110>Southwest University
<120>expression for striking drop cabbage type rape and its parent species MYB43 is improving the application in disease resistance of plant
<160> 40
<170> SIPOSequenceListing 1.0
<210> 1
<211> 27
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 1
ggaaatacaa cattgtcagt atattag 27
<210> 2
<211> 23
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 2
atacgaggtt aaacagagaa aag 23
<210> 3
<211> 27
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 3
atgtcaaaat aaacagagaa aagtatg 27
<210> 4
<211> 33
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 4
atatacatta taacttgtaa gtatattagg tac 33
<210> 5
<211> 27
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 5
gagaaaagta tgttcacaat tgcaata 27
<210> 6
<211> 27
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 6
gagaaaagta tgttcacaat tgcaatc 27
<210> 7
<211> 19
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 7
gccaatgctg ttggagagc 19
<210> 8
<211> 22
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 8
tcagagagag gcttatgggt ca 22
<210> 9
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 9
agacggtgcg caacaacaag 20
<210> 10
<211> 26
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 10
cttgccgtcg ttgtaattaa tgttac 26
<210> 11
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 11
agaaggtgcg cagcaacaag 20
<210> 12
<211> 26
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 12
ctttccgtct ttgtaattaa tgtcac 26
<210> 13
<211> 22
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 13
actggacatc tcttttgctg at 22
<210> 14
<211> 29
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 14
cttgtcgtct ttgtaaataa tattatcct 29
<210> 15
<211> 22
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 15
actggacatc tcttttgctc ag 22
<210> 16
<211> 29
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 16
cttgtcgtct ttgtaaataa tattatccc 29
<210> 17
<211> 22
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 17
gatttctgcc cagtgctctg aa 22
<210> 18
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 18
tctgccaagc ccgttccctt 20
<210> 19
<211> 33
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 19
ggatccgacg tcaacaacat caactaggga aac 33
<210> 20
<211> 35
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 20
tctagaccat ggagaagatc aaatgtccat gaatc 35
<210> 21
<211> 23
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 21
ggaagttcat ttcatttgga gag 23
<210> 22
<211> 24
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 22
gctcaggttt tttacaacgt gcac 24
<210> 23
<211> 34
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 23
atttaaatga cgtcaggttt acattcaaga caca 34
<210> 24
<211> 27
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 24
cctaggtgga ttcgtacgta aactttt 27
<210> 25
<211> 1235
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 25
ggaaatacaa cattgtcagt atattagata tctatttgag cacatctcta gactatataa 60
agtaagaaaa atatatatag agagaggaga gagatgggga ggcaaccatg ttgtgacaaa 120
gtaggcttga agaaaggccc atggactgtt gaagaagaca agaagcttat caacttcatc 180
ctcaccaatg gccaatgctg ttggagagct cttcccaagc tttctggact attgaggtgt 240
ggtaaaagct gcagattaag atggataaat tatttgagac ctgatttaaa aagaggtctt 300
ttatcagaaa atgaagagca gatggtcatt gatcttcatg cccaacttgg caatagatgg 360
tcaaagattg cctctcatct accaggaaga actgataatg aaattaagaa ccattggaac 420
acacacataa agaaaaaact aaggaagatg ggtattgacc ctatgaccca taagcctctc 480
tctgaacaag acggtgcgca acaacaagct caggggagaa agaaaagctt agtgtctcgt 540
gatgagaaga acacaaacca aggccaagaa gatcaacaac aaactagaaa agaagaagat 600
caacaacatc aactagggaa agatttggag aagaacaaca cacccatttc tactgatgat 660
gggttttgca ttgatgatat cccattactc agtccacatg agatatttgt ggacatccct 720
tctgctcacc atcatactag tgatgataat gccaacatta acattagtaa ctccacttca 780
ccttcttcgt cttcctcttc tacctcgtcg tgcatatcat cactaccggg tgatgagttc 840
tcaaagtttc ttgatgaaat ggagattgtt gacctcaagt ggctctcatc cgatgattca 900
tcagggggta acattaatta caacgacggc aagttcaaca acaatgttga tacgatgagc 960
ttgtgggaca tcaatgattt gagcagcttg gaattgttta tgaatgatca tgatgatagt 1020
gtggttgaag cggatgttca agaatggttt tagatcatga ttcatggaca tttgatcttc 1080
tttaactttt agtttttttt tcttctcatg ttgtttttaa ttgtttttgt ttgtttgttt 1140
gggtttggcc ttggtggtgg atgattaggt gtaaaagtac atatgtaatt aaagattgca 1200
attgtgaaca tacttttctc tgtttaacct cgtat 1235
<210> 26
<211> 1236
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 26
ggaaatacaa cattgtcagt atattagata tctattcgag cacatctcta gactatataa 60
agaaagaaaa atatatagag agagagagga gagagatggg gaggcaacca tgttgtgaca 120
aagtaggctt gaagaaaggg ccatggactg ttgaagaaga caagaagctc atcaacttca 180
tcctcaccaa tggccaatgc tgttggagag ctcttcccaa gctttctgga ctattgaggt 240
gtggtaaaag ctgcagatta agatggataa attatttgag acctgattta aaaagaggtc 300
ttttatctga aaatgaagag cagatggtca ttgatcttca tgcccaactt ggcaatagat 360
ggtcaaagat tgcctctcat ctaccaggaa gaactgataa tgaaattaag aaccattgga 420
acacacacat aaagaaaaaa ctaaggaaga tgggtattga ccctatgacc cataagcctc 480
tctctgaaca agacggtgcg caacaacaag ctcaggggat aaagaaaagc ttagtgtctc 540
gtgatgagaa gaacacaaac caaggccaag aagatcaaca acaaactaga aaagaagaag 600
atcaacaaca tcaactaggg aaagatttgg agaagaacaa cacacccatt tctactgatg 660
atgggttttg cattgatgat atcccattac tcagtccaca tgagatattt gtggacatct 720
cttctgctca ccatcatact agtgatgata atgccaacat taacattagt aactccactt 780
caccttcttc gtcttcctct tctacttcgt catgcatatc atcactaccg ggtgatgagt 840
tctcaaagtt tcttgatgaa atggagattg ttgatctcaa gtggctctca tccgatgatt 900
catcaggggg tgacattaat tacaacgacg gcaagttcaa caacaatgtt gatacgatga 960
gcttgtggga catcaatgat ttgagcagct tggaattgtt ttatgaatga tcatgatgat 1020
agtgtggttg aagcggatgt tcaagaatgg ttttagatca tgattcatgg acatttgatc 1080
ttctttaact tttagttttt tttttcttct cttgttgttt ttaattgttt ttgtttgttt 1140
gtttgggttt ggccttggtg ttgcagttta gtggatgatt aggtgtaaaa gtacatatgt 1200
aattaaagat tgcaattgtg aacatacctt tcactg 1236
<210> 27
<211> 1199
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 27
cttgtttgag catatctcta gactaatata tatatatata tatatataga gagagagaga 60
cagagggtgc gaggagtgaa gatggggagg cagccatgtt gtgacaaagt agggctgaag 120
aaagggccat ggacagctga ggaagacaag aagctcatca acttcatcct caccaatggc 180
cactgctgtt ggagagctct tcccaagctt tctggactct tgaggtgtgg aaaaagctgc 240
agactaagat ggatcaatta tttgagacct gatttaaaaa gaggtctttt atcagaatgt 300
gaagaacaga tggtcattga tcttcatgcc caacttggca atagatggtc aaagattgcc 360
tctcatctac caggaagaac tgataatgaa ataaagaacc attggaacac acacataaag 420
aaaaaactaa ggaagatggg cattgaccct atgacccata agcctctctc tgaacaagac 480
gggtcacagc aagctcaagg gagcaagagt ttagtgcctc atgatgacaa gaacaaaaaa 540
caagaccaag aagataaaca aactaaagaa aaacaagaac accatcaact agggatagat 600
ttggacaaga gcaacaaaac aatatctact gatgatgggt tttgcattga tgaagtcccg 660
ttgctcgatc cacatgagat attactggac atctcttttg ctgatcatca tactagtgat 720
gaaaatgctc acattaacat tagtaactcc acttctcctt cttcctcttc tacctcgtcg 780
tgtatatcat cagtaccggg tgaggagttc tcgaagtttc ttgatgaaat ggacactatt 840
gacctcaagt ggctctcatc cgatcattca tcagaggata atattattta caaagacgac 900
aagttccaca acaatgttga tacgatgaac ttgtgggaca taaattattt gagcagcttg 960
gaattgttta tgaatgatca tgatgatggt tttgttggaa gcggatgttc aagaatggtt 1020
tagatcaata tacatgacca ttttactttc agtttttttt tcatgttgtt tttaattagt 1080
tctttttgtt tgttttcgaa gtgggcgatt tggatttggc cttggtgttg caatttagtg 1140
gatgattagg tgtaaaatac atatgtaata aatattgcaa ttgtgaacac acttttctc 1199
<210> 28
<211> 1217
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 28
atatacatta taacttgtaa gtatattagg tacttgtttg agcatatctc tagactaata 60
gatatatata tatatagaga gagagagcca gagggtgcga ggagtgaaga tggggaggca 120
gccatgttgt gacaaagtag ggctgaagaa agggccatgg acagctgagg aagacaagaa 180
gctcatcaac ttcatcctca ccaatggcca ctgctgttgg agagctcttc ccaagctttc 240
tggactcttg aggtgtggaa aaagctgcag actaagatgg atcaattatt tgagacctga 300
tttaaaaaga ggtcttttat cagaatgtga agaacagatg gtcattgatc ttcatgccca 360
acttggcaat agatggtcaa agattgcctc tcatctacca ggaagaactg ataatgaaat 420
aaagaaccat tggaacacac acataaagaa aaaactaagg aagatgggca ttgaccctat 480
gacccataag cctctccctg aacaagacgg ttcacagcaa gctcaaggga gcaagagttt 540
agtgcctcat gatgacaaga acaaaaaaca agaccaagaa gataaacaaa ctaaagaaaa 600
acaagaacac catcaactag ggatagattt ggacaagagc aacaaaacaa tatctactga 660
tgatgggttt tgcattgatg aagtcccgtt gctcgatcca catgagatat tactggacat 720
ctcttttgct cagcatcata ctagtgatga aaatgctcac attaacatta gtaactccac 780
ttctccttct tcctcttcta cctcgtcgtg tatatcatca gtaccgggtg aggagttctc 840
gaagtttctt gatgaaatgg agactattga cctcaagtgg ctctcatccg atcattcatc 900
aggggataat attatttaca aagacgacaa gttccacaac aatgttgata cgatgaactt 960
gtgggacata aattatttga gcagcttgga attgtttatg aatgatcatg atgatggttt 1020
tgttggaagc ggatgttcaa gaatggttta gatcaatatt catgaccatt ttactttcag 1080
tttttttttt catgttgttt ttaattagtt ctttttgttt gttttcgaag tgggcgattc 1140
ggatttggcc gtggtgttgc aatttagtgg atgattaggt gtaaaataca tatgtaataa 1200
agattgcaat tgtgaac 1217
<210> 29
<211> 1235
<212> DNA
<213>Chinese cabbage (Brassica rapa)
<400> 29
ggaaatacaa cattgtcagt atattagata tctatttgag cacatctcta gactatataa 60
agtaagaaaa atatatatag agagaggaga gagatgggga ggcaaccatg ttgtgacaaa 120
gtaggcttga agaaaggccc atggactgtt gaagaagaca agaagcttat caacttcatc 180
ctcaccaatg gccaatgctg ttggagagct cttcccaagc tttctggact attgaggtgt 240
ggtaaaagct gcagattaag atggataaat tatttgagac ctgatttaaa aagaggtctt 300
ttatcagaaa atgaagagca gatggtcatt gatcttcatg cccaacttgg caatagatgg 360
tcaaagattg cctctcatct accaggaaga actgataatg aaattaagaa ccattggaac 420
acacacataa agaaaaaact aaggaagatg ggtattgacc ctatgaccca taagcctctc 480
tctgaacaag acggtgcgca acaacaagct caggggagaa agaaaagctt agtgtctcgt 540
gatgagaaga acacaaacca aggccaagaa gatcaacaac aaactagaaa agaagaagat 600
caacaacatc aactagggaa agatttggag aagaacaaca cacccatttc tactgatgat 660
gggttttgca ttgatgatat cccattactc agtccacatg agatatttgt ggacatctct 720
tctgctcacc atcatactag tgatgataat gccaacatta acattagtaa ctccacttca 780
ccttcttcgt cttcctcttc tatctcgtcg tgcatatcat cactaccggg tgatgagttc 840
tcaaagtttc ttgatgaaat ggagattgtt gacctcaagt ggctctcatc cgatgattca 900
tcagggggta acattaatta caacgacggc aagttcaaca acaatgttga tacgatgagc 960
ttgtgggaca tcaatgattt gagcagcttg gaattgttta tgaatgatca tgatgatagt 1020
gtggttgaag cggatgttca agaatggttt tagatcatga ttcatggaca tttgatcttc 1080
tttaactttt agtttttttt tcttctcatg ttgtttttaa ttgtttttgt ttgtttgttt 1140
gggtttggcc ttggtggtgg atgattaggt gtaaaagtac atatgtaatt aaagattgca 1200
attgtgaaca tacttttctc tgtttaacct cgtat 1235
<210> 30
<211> 1202
<212> DNA
<213>Chinese cabbage (Brassica rapa)
<400> 30
cttgtttgag catatctcta gactaatata tatatatata tatatatata tagagagaga 60
gacagagggt gcgaggagtg aagatgggga ggcagccatg ttgtgacaaa gtagggctga 120
agaaagggcc atggacagct gaggaagaca agaagctcat caacttcatc ctcaccaatg 180
gccactgctg ttggagagct cttcccaagc tttctggact cctgaggtgc ggaaaaagct 240
gcagactaag atggatcaat tatttgagac ctgatttaaa aagaggtctt ttatcagatt 300
gtgaagaaca gatggtcatt gatcttcatg cccaacttgg caatagatgg tcaaagattg 360
cctctcatct accaggaaga actgataatg aaataaagaa ccattggaac acacacataa 420
agaaaaaact aaggaagatg ggcattgacc ctatgaccca taagcctctc cctgaacaag 480
acgggtcaca gcaagctcaa gggagcaaga gtttagtgcc tcatgatgac aagaacaaaa 540
aacaagacca agaagataaa caaactaaag aaaaacaaga acaccatcaa ctagggatag 600
atttggacaa gagcaacaaa acaatatcta ctgatgatgg gttttgcatt gatgaagtcc 660
cgttgctcga tccacatgag atattactgg acatctcttt tgctgatcat catactagtg 720
atgaaaatgc tcacattaac attagtaact ccacttctcc ttcttcctct tctacctcgt 780
cgtgtatatc atcagtaccg ggtgaggagt tctcgaagtt tcttgatgaa atggacacta 840
ttgacctcaa gtggctctca tccgatcatt catcagagga taatattatt tacaaagacg 900
acaagttcca caacaatgtt gatacgatga acttgtggga cataaattat ttgagcagct 960
tggaattgtt tatgaatgat catgatgatg gttttgttgg aagcggatgt tcaagaatgg 1020
tttagatcaa tatacatgac cattttactt tcagtttttt ttttcatgtt gtttttaatt 1080
agttcttttt gtttgttttc gaagtgggcg atttggattt ggccttggtg ttgcaattta 1140
gtggatgatt aggtgtaaaa tacatatgta ataaatattg caattgtgaa catacttttc 1200
tc 1202
<210> 31
<211> 1242
<212> DNA
<213>wild cabbage (Brassica oleracea)
<400> 31
ggaaatacaa cattgtcagt atattagata tatttgagca catctctaga ctatataaag 60
taagaaaaat atatatagag agaggagaga gatggggagg cagccatgtt gtgacaaagt 120
aggcttgaag aaagggccat ggactgttga agaagacaag aagctcatca acttcatcct 180
caccaatggc caatgctgtt ggagagctct tcccaaactt tctggactat tgaggtgtgg 240
taaaagctgc agattaagat ggataaatta tttgagacct gatttaaaaa gaggtctttt 300
atcagaaaat gaagagcaga tgatcattga tcttcatgcc caacttggca atagatggtc 360
aaagattgcc tctcatctac caggaagaac tgataatgaa attaagaacc actggaacac 420
acacataaag aaaaaactaa ggaagatggg tattgaccct atgacccata agcctctctc 480
tgaacaagaa ggtgcgcagc aacaagctca ggggacaaag aaaagcttag tgtctcgtga 540
tgagaagaaa agaaaccaag gccaagaaga tcaacaaact agaaaagaag aagatcaaca 600
acatcaacta gggaaacatt tggacaagaa caacacaccc atttctactg atgatgggtt 660
ttgcattgat gatatcccat tactcaatcc acatgagata tttgtggaca tctcttctgc 720
tcaccatcat actagtgatg gtaatgccaa cattaacatt agtaactcca cttcaccatc 780
ttcgtcttcc tctcctacct cgtcgtgcat atcatcacta ccaggtgatg agttctcaaa 840
gtttcttgat gaaatggaga ttgttgacct caagtggctc tcatccgatg attcgtcagg 900
gggtgacatt aattacaaag acggaaagtt caataacaat gttgatacga tgaacttgtg 960
ggacatcaat gatttgagca gcttggaatt gtttatgaat gatcacgatg atagtgtggt 1020
tggaagcgga tgttcaagaa tggttttaga tcatgattca tggacatttg atcttcttta 1080
acttttagtt tttttttctt ctcttgttgt ttttaattgt tttttgtttg tttgtttggg 1140
tttggcctcg gtgttgcagt ttagtggatg attaggtgta aaagtacata tgtaattaaa 1200
gattacaatt gtgaacatac ttttctctgt ttattttgac at 1242
<210> 32
<211> 2430
<212> DNA
<213>wild cabbage (Brassica oleracea)
<400> 32
atatacatta taacttgtaa gtatattagg tacttgtttg agcatatctc tagactaata 60
gatatatata tagagagaga gagagccaga gggtgcgagg agtgaagatg gggaggcagc 120
catgttgtga caaagtaggg ctgaagaaag ggccatggac agctgaggaa gacaagaagc 180
tcatcaactt catcctcacc aatggccact gctgttggag agctcttccc aagctttctg 240
gactcttgag gtgtggaaaa agctgcagac taagatggat caattatttg agacctgatt 300
taaaaagagg tcttttatca gaatgtgaag aacagatggt cattgatctt catgcccaac 360
ttggcaatag atggtcaaag attgcctctc atctaccagg aagaactgat aatgaaataa 420
agaaccattg gaacacacac ataaagaaaa aactaaggaa gatgggcatt gaccctatga 480
cccataagcc tctccctgaa caagacggtt cacagcaagc tcaagggagc aagggtttag 540
tgcctcatga tgacaagaac aaaaaacaag accaagaaga taaacaaact aaagaaaaac 600
aagaacacca tcaactaggg atagatttgg acaagagcaa caaaacaata tctactgatg 660
atgggttttg cattgatgaa gtcccgttgc tcgatccaca tgagatatta ctggacatct 720
cttttgctca gcatcatact agtgatgaaa atgctcacat taacattagt aactccgctt 780
ctccttcttc ctcttctacc tcgtcgtgta tatcatcagt accgggtgag gagttctcga 840
agtttcttga tgaaatggag actattgacc tcaagtggct ctcatccgat cattcatcag 900
gggataatat tatttacaaa gacgacaagt tccacaacaa tgttgatacg atgaacttgt 960
gggacataaa ttatttgagc agcttggaat tgtttatgaa tgatcatgat gatggttttg 1020
ttggaagcgg atgttcaaga atggtttaga tcaatattca tgaccatttt actttcagtt 1080
ttttttttca tgttgttttt aattagttct ttttgtttgt tttcgaagtg ggcgatttgg 1140
atttggccgt ggtgttgcaa tttagtggat gattaggtgt aaaatacata tgtaataaag 1200
attgcaattg tgaacatata cattataact tgtaagtata ttaggtactt gtttgagcat 1260
atctctagac taatagatat atatatagag agagagagag ccagagggtg cgaggagtga 1320
agatggggag gcagccatgt tgtgacaaag tagggctgaa gaaagggcca tggacagctg 1380
aggaagacaa gaagctcatc aacttcatcc tcaccaatgg ccactgctgt tggagagctc 1440
ttcccaagct ttctggactc ttgaggtgtg gaaaaagctg cagactaaga tggatcaatt 1500
atttgagacc tgatttaaaa agaggtcttt tatcagaatg tgaagaacag atggtcattg 1560
atcttcatgc ccaacttggc aatagatggt caaagattgc ctctcatcta ccaggaagaa 1620
ctgataatga aataaagaac cattggaaca cacacataaa gaaaaaacta aggaagatgg 1680
gcattgaccc tatgacccat aagcctctcc ctgaacaaga cggttcacag caagctcaag 1740
ggagcaaggg tttagtgcct catgatgaca agaacaaaaa acaagaccaa gaagataaac 1800
aaactaaaga aaaacaagaa caccatcaac tagggataga tttggacaag agcaacaaaa 1860
caatatctac tgatgatggg ttttgcattg atgaagtccc gttgctcgat ccacatgaga 1920
tattactgga catctctttt gctcagcatc atactagtga tgaaaatgct cacattaaca 1980
ttagtaactc cgcttctcct tcttcctctt ctacctcgtc gtgtatatca tcagtaccgg 2040
gtgaggagtt ctcgaagttt cttgatgaaa tggagactat tgacctcaag tggctctcat 2100
ccgatcattc atcaggggat aatattattt acaaagacga caagttccac aacaatgttg 2160
atacgatgaa cttgtgggac ataaattatt tgagcagctt ggaattgttt atgaatgatc 2220
atgatgatgg ttttgttgga agcggatgtt caagaatggt ttagatcaat attcatgacc 2280
attttacttt cagttttttt tttcatgttg tttttaatta gttctttttg tttgttttcg 2340
aagtgggcga tttggatttg gccgtggtgt tgcaatttag tggatgatta ggtgtaaaat 2400
acatatgtaa taaagattgc aattgtgaac 2430
<210> 33
<211> 2293
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 33
ggaaatacaa cattgtcagt atattagata tctatttgag cacatctcta gactatataa 60
agtaagaaaa atatatatag agagaggaga gagatgggga ggcaaccatg ttgtgacaaa 120
gtaggcttga agaaaggccc atggactgtt gaagaagaca agaagcttat caacttcatc 180
ctcaccaatg gccaatgctg ttggagagct cttcccaagc tttctggtcg attttctctc 240
cttatttcct ccttaaacga catcttttgg gatttctcat gtgtaaaagt tcactttctt 300
gcttcttgtg tgtttagcct ttctctacgc caactgacgc ttttttggtg ctatttctct 360
acaccgacga aactgatgct attttgattt ttagatactc gtcttttaaa agttcacttc 420
cttaaaacgt ccaattttat tactagtaat ttctatttct ctactttctt cttgtcagca 480
gtttttatag taatattttc tctacttttg tgtaaattaa tttgcatgag ttattttggt 540
atatgcatgc tagtatagat gttcaccaac aatcaaatat acctttagaa attagtttca 600
agaaacaatt ttgatgcagg agaatcatat gaattcttaa ctttcctttt tgaaatacaa 660
tatatatttt aatatcggtt ggacctaaaa acaaaagtct caaaacatat aattagacta 720
ttaatcatag gctcatagcg tctggcccga aaagaaatat agtgcttgat attcgtggtc 780
ctcacacgtt attagttgat cttgataaaa aaaaattgtt ttgtttttgg ctttttgttt 840
agtgcttcct gccaaaatat atttcgtacg gttttaactt tcaatcaatc tgattgttaa 900
tttaattact ttggttaatt aactaaatgc aggactattg aggtgtggta aaagctgcag 960
attaagatgg ataaattatt tgagacctga tttaaaaaga ggtcttttat cagaaaatga 1020
agagcagatg gtcattgatc ttcatgccca acttggcaat aggtttatcc tctttttatt 1080
caaaataatt gttatttcat attataaaca taatttactt accttatttg acattgtaac 1140
taactcataa tataatgaaa tgtttaaaga ttatggacat tagatttcaa tattaaaggt 1200
attggagaag cacaaaagtc attatatgac gcaaacttta tcactttttt tgcatgaaag 1260
agattggcta atccacattt ttaattactc atattttctt tcaaacccaa tagtttaatt 1320
aagtcggtgt gatgaaaatg tttgaacagt cgaaatcatt agtgaaatta tcacttataa 1380
aattttcaaa tattttattt ttatttttgt gcagatggtc aaagattgcc tctcatctac 1440
caggaagaac tgataatgaa attaagaacc attggaacac acacataaag aaaaaactaa 1500
ggaagatggg tattgaccct atgacccata agcctctctc tgaacaagac ggtgcgcaac 1560
aacaagctca ggggagaaag aaaagcttag tgtctcgtga tgagaagaac acaaaccaag 1620
gccaagaaga tcaacaacaa actagaaaag aagaagatca acaacatcaa ctagggaaag 1680
atttggagaa gaacaacaca cccatttcta ctgatgatgg gttttgcatt gatgatatcc 1740
cattactcag tccacatgag atatttgtgg acatcccttc tgctcaccat catactagtg 1800
atgataatgc caacattaac attagtaact ccacttcacc ttcttcgtct tcctcttcta 1860
cctcgtcgtg catatcatca ctaccgggtg atgagttctc aaagtttctt gatgaaatgg 1920
agattgttga cctcaagtgg ctctcatccg atgattcatc agggggtaac attaattaca 1980
acgacggcaa gttcaacaac aatgttgata cgatgagctt gtgggacatc aatgatttga 2040
gcagcttgga attgtttatg aatgatcatg atgatagtgt ggttgaagcg gatgttcaag 2100
aatggtttta gatcatgatt catggacatt tgatcttctt taacttttag tttttttttc 2160
ttctcatgtt gtttttaatt gtttttgttt gtttgtttgg gtttggcctt ggtggtggat 2220
gattaggtgt aaaagtacat atgtaattaa agattgcaat tgtgaacata cttttctctg 2280
tttaacctcg tat 2293
<210> 34
<211> 2252
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 34
ggaaatacaa cattgtcagt atattagata tctattcgag cacatctcta gactatataa 60
agaaagaaaa atatatagag agagagagga gagagatggg gaggcaacca tgttgtgaca 120
aagtaggctt gaagaaaggg ccatggactg ttgaagaaga caagaagctc atcaacttca 180
tcctcaccaa tggccaatgc tgttggagag ctcttcccaa gctttctggt cgattttctc 240
tctttatttc ctccttaaac gacatctttt gggatttctc atgtgtaaaa gttcactttc 300
ttgcttcttg tgtgtttagc ctttctctac accaactgat gctatttttt gggtgctatt 360
tctctacacc gacgaaactg atgctcttat ttaggatctc gtattttaaa agttcacttc 420
cttaaaacgt ccaattttat tactagtaat ttatatttct ctactttctt cttgtcagca 480
gtttttgtag taatattttc tctacttttg tgtaaattaa tttgcatgag ttattttggt 540
atatgcatgc tagtatagat gttcaccaac aatcaaatat acctttataa attattttca 600
agaaacaatt ttgatgcaga agaatcatat gaattcttaa ctttcctttt tgaaatagaa 660
tatttctcta tcggttggac ctaaaaacaa aagtctcaaa aaaacatagt gcttgatatt 720
cgtggtcctc acacgttatt atttgatctt gatcaatttt tttgttttgt ttttggcttt 780
ttgtttagtg cttcctgcct agtcaaaata tatttcgtat ggttttaact ttcaatcagt 840
ccaattgtta atttaattac tttggttaat taactaaatg caggactatt gaggtgtggt 900
aaaagctgca gattaagatg gataaattat ttgagacctg atttaaaaag aggtctttta 960
tctgaaaatg aagagcagat ggtcattgat cttcatgccc aacttggcaa taggtttgct 1020
ctctttttct tcaaaataat tgttatttca tattataaac ataatttact tacgttaact 1080
tgacattgta actaactaat aatataataa aatatttaaa gattatggcc atttgatttc 1140
aatattatta agggtattgg agaaacacaa aagtcattat atgacgcaaa ttaactttat 1200
cacttttttg catgaaagag attggctaat ccacatcttt atttactcaa attttctttt 1260
taaccccagt agtttaatta agtcggtgtg atgaaaatgt ttgaacagtc gaaatcatta 1320
gttaaattca cacttataaa attttcaaat attttatttt tatttttcgt gcagatggtc 1380
aaagattgcc tctcatctac caggaagaac tgataatgaa attaagaacc attggaacac 1440
acacataaag aaaaaactaa ggaagatggg tattgaccct atgacccata agcctctctc 1500
tgaacaagac ggtgcgcaac aacaagctca ggggataaag aaaagcttag tgtctcgtga 1560
tgagaagaac acaaaccaag gccaagaaga tcaacaacaa actagaaaag aagaagatca 1620
acaacatcaa ctagggaaag atttggagaa gaacaacaca cccatttcta ctgatgatgg 1680
gttttgcatt gatgatatcc cattactcag tccacatgag atatttgtgg acatctcttc 1740
tgctcaccat catactagtg atgataatgc caacattaac attagtaact ccacttcacc 1800
ttcttcgtct tcctcttcta cttcgtcatg catatcatca ctaccgggtg atgagttctc 1860
aaagtttctt gatgaaatgg agattgttga tctcaagtgg ctctcatccg atgattcatc 1920
agggggtgac attaattaca acgacggcaa gttcaacaac aatgttgata cgatgagctt 1980
gtgggacatc aatgatttga gcagcttgga attgttttat gaatgatcat gatgatagtg 2040
tggttgaagc ggatgttcaa gaatggtttt agatcatgat tcatggacat ttgatcttct 2100
ttaactttta gttttttttt tcttctcttg ttgtttttaa ttgtttttgt ttgtttgttt 2160
gggtttggcc ttggtgttgc agtttagtgg atgattaggt gtaaaagtac atatgtaatt 2220
aaagattgca attgtgaaca tacctttcac tg 2252
<210> 35
<211> 2237
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 35
cttgtttgag catatctcta gactaatata tatatatata tatatataga gagagagaga 60
cagagggtgc gaggagtgaa gatggggagg cagccatgtt gtgacaaagt agggctgaag 120
aaagggccat ggacagctga ggaagacaag aagctcatca acttcatcct caccaatggc 180
cactgctgtt ggagagctct tcccaagctt tctggtatat tttctttctt tcttttctcc 240
acatgcgacg tccttgggat ttctcatgtg taaaaagttc gtttttttct taacacatgt 300
gtttttacat tttctcctac caaaaaaacg atatgctatt tttgatatat ggattatcgt 360
atcttaaaag tgaactttct taaaacgtcc ccttttattc ctactgattt ctattttatc 420
tattttcttg tttttgctga cactaataat aatacttctc tacccttttt taattaattt 480
gcatgagttc ttttgctata tctatactag tatagttttg caccaatcaa atgaatttac 540
tattttcagt aatagtttca atgcaggaga ataatattca ttgttaccgt cctttttgaa 600
atggaataat tctctatctt ttcgacttac gaaatccgat caatcatggt gtttggcccg 660
gacaaaaatc aatgtttgat actggtggtc ctacacgtta ttatttgttc ttgataattt 720
tttgttctgt tttgttttca cttgttcctt cttaatcagt ttatctctcg tatatttaac 780
tagtttccaa tcattctgat cgttaatcta gttactttgg ttaatcaatt aaatcaggac 840
tcttgaggtg tggaaaaagc tgcagactaa gatggatcaa ttatttgaga cctgatttaa 900
aaagaggtct tttatcagaa tgtgaagaac agatggtcat tgatcttcat gcccaacttg 960
gcaataggtt tattctcttt ctcttgaaaa tcattgttat tccatatttt aaaaaatcct 1020
caaatttata aacagtaatt ttacctacct tttaaaaaaa aaactaattt tacctgcctt 1080
aactttgatg ttgtaactaa ctcgtaataa aaatataaaa atattgtggc cattagattt 1140
caatattatt aaggtcacgg aggaacacaa aagtcacaat agaacactga acacgcaaac 1200
tttactattt ttttctgtat gaaagagatt ggccaatcta catctcatat ttaaatttaa 1260
tcgtgcgttt ttaaccacgt acggtagttt aatttagtaa gtctgatgat aatgactgaa 1320
cagtcgaaat catgagttaa ttaaacttac ttaagtatcg aatcatttta atttttgtgc 1380
agatggtcaa agattgcctc tcatctacca ggaagaactg ataatgaaat aaagaaccat 1440
tggaacacac acataaagaa aaaactaagg aagatgggca ttgaccctat gacccataag 1500
cctctctctg aacaagacgg gtcacagcaa gctcaaggga gcaagagttt agtgcctcat 1560
gatgacaaga acaaaaaaca agaccaagaa gataaacaaa ctaaagaaaa acaagaacac 1620
catcaactag ggatagattt ggacaagagc aacaaaacaa tatctactga tgatgggttt 1680
tgcattgatg aagtcccgtt gctcgatcca catgagatat tactggacat ctcttttgct 1740
gatcatcata ctagtgatga aaatgctcac attaacatta gtaactccac ttctccttct 1800
tcctcttcta cctcgtcgtg tatatcatca gtaccgggtg aggagttctc gaagtttctt 1860
gatgaaatgg acactattga cctcaagtgg ctctcatccg atcattcatc agaggataat 1920
attatttaca aagacgacaa gttccacaac aatgttgata cgatgaactt gtgggacata 1980
aattatttga gcagcttgga attgtttatg aatgatcatg atgatggttt tgttggaagc 2040
ggatgttcaa gaatggttta gatcaatata catgaccatt ttactttcag tttttttttc 2100
atgttgtttt taattagttc tttttgtttg ttttcgaagt gggcgatttg gatttggcct 2160
tggtgttgca atttagtgga tgattaggtg taaaatacat atgtaataaa tattgcaatt 2220
gtgaacacac ttttctc 2237
<210> 36
<211> 2256
<212> DNA
<213>cabbage type rape (Brassica napus)
<400> 36
atatacatta taacttgtaa gtatattagg tacttgtttg agcatatctc tagactaata 60
gatatatata tatatagaga gagagagcca gagggtgcga ggagtgaaga tggggaggca 120
gccatgttgt gacaaagtag ggctgaagaa agggccatgg acagctgagg aagacaagaa 180
gctcatcaac ttcatcctca ccaatggcca ctgctgttgg agagctcttc ccaagctttc 240
tggtatatct tctctctttc tttcttttct ccatatgcga cgtccttggg atttctcatg 300
tgtaaaaagt ttttttttct taacacatgt gtttttacat tttctcttac caaaaaaatg 360
atatgctatt tttgatatat ggattatcgt attttaaaag ttaactttct taaaacgtcc 420
ccttttattc ctactgattt ctattttatc tattttcttg tttttgctga cactgataat 480
aatacttctc tacctttttt aattaatctg catgagttct tttgctatat ctatactagt 540
atagttttgc accaaatcaa atgaatttac tatttttcag taataggttc aatgcaggag 600
aatcatattc aatgataccg ccccttttga aatggaagaa ttctatatct tttctactgt 660
aaaaacctat cgaccatgat gattggcctt cgactaaaga gtggcctcta ctgccgccca 720
tttatatagt ttatgttcat gaaaaattat gtgttctgag acgtctgggt cacttttcag 780
ggaaaagtcc gcgtaacccc tatttgttca tttttctctt tccaatcatt ctgatcgtta 840
atctaattac tttggttaat caattaaatc aggactcttg aggtgtggaa aaagctgcag 900
actaagatgg atcaattatt tgagacctga tttaaaaaga ggtcttttat cagaatgtga 960
agaacagatg gtcattgatc ttcatgccca acttggcaat aggtttattc tctttctctg 1020
gaaaatcatt gttattccat atttttaaaa atcctcaaat ttataaacag taattttacc 1080
taccttttta aaaaaaacta atttcacctg ccaaactttt atgttgtaac taactcgtaa 1140
taaaaatata aaaaatattg tggccattag acttcaatat tattaaggtc tcggaggaac 1200
acaaaagtca caatagaaca ctgaacacgc aaactttact atttcttctg tatgaaagag 1260
attggccaat ctacatctca tatttaaatt taatcgtgcg tttttaacca cgtacggtag 1320
tttaatttag taggtctgat gataatgact gaacagtcga aatcatgagt taattaaact 1380
taagtttcga atcattttaa tttttgtgca gatggtcaaa gattgcctct catctaccag 1440
gaagaactga taatgaaata aagaaccatt ggaacacaca cataaagaaa aaactaagga 1500
agatgggcat tgaccctatg acccataagc ctctccctga acaagacggt tcacagcaag 1560
ctcaagggag caagagttta gtgcctcatg atgacaagaa caaaaaacaa gaccaagaag 1620
ataaacaaac taaagaaaaa caagaacacc atcaactagg gatagatttg gacaagagca 1680
acaaaacaat atctactgat gatgggtttt gcattgatga agtcccgttg ctcgatccac 1740
atgagatatt actggacatc tcttttgctc agcatcatac tagtgatgaa aatgctcaca 1800
ttaacattag taactccact tctccttctt cctcttctac ctcgtcgtgt atatcatcag 1860
taccgggtga ggagttctcg aagtttcttg atgaaatgga gactattgac ctcaagtggc 1920
tctcatccga tcattcatca ggggataata ttatttacaa agacgacaag ttccacaaca 1980
atgttgatac gatgaacttg tgggacataa attatttgag cagcttggaa ttgtttatga 2040
atgatcatga tgatggtttt gttggaagcg gatgttcaag aatggtttag atcaatattc 2100
atgaccattt tactttcagt tttttttttc atgttgtttt taattagttc tttttgtttg 2160
ttttcgaagt gggcgattcg gatttggccg tggtgttgca atttagtgga tgattaggtg 2220
taaaatacat atgtaataaa gattgcaatt gtgaac 2256
<210> 37
<211> 2295
<212> DNA
<213>Chinese cabbage (Brassica rapa)
<400> 37
ggaaatacaa cattgtcagt atattagata tctatttgag cacatctcta gactatataa 60
agtaagaaaa atatatatag agagaggaga gagatgggga ggcaaccatg ttgtgacaaa 120
gtaggcttga agaaaggccc atggactgtt gaagaagaca agaagcttat caacttcatc 180
ctcaccaatg gccaatgctg ttggagagct cttcccaagc tttctggtcg attttctctc 240
tttatttcct ccttaaacga catcttttgg gatttctcat gtgtaaaagt tcactttctt 300
gcttcttgtg tgtttagcct ttctctacgc caactgacgc ttttttggtg ctatttctct 360
acaccgacga aactgatgct attttgattt ttagatactc gtcttttaaa agttcacttc 420
cttaaaacgt ccaattttat tactagtaat ttctatttct ctactttctt cttgtcagca 480
gtttttatag taatattttc tttacttttg tgtaaattaa tttgcatgag ttattttggt 540
atatgcatgc tagtatagat gttcaccaac aatcaaatat acctttagaa attagtttca 600
agaaacaatt ttgatgcagg agaatcatat gaattcttaa ctttcctttt tgaaatacaa 660
tatatatttt aatatcggtt ggacctaaaa acaaaagtct caaaacatat aattagacta 720
ttaatcatag gctcatagcg tctggcccga aaagaaatat agtgcttgat attcgtggtc 780
ctcacacgtt attagttgat cttgataaaa aaaaattgtt ttgtttttgg ctttttgttt 840
agtgcttcct gccaaaatat atttcgtatg gttttaactt tcaatcaatc tgattgttaa 900
tttaattact ttggttaatt aactaaatgc aggactattg aggtgtggta aaagctgcag 960
attaagatgg ataaattatt tgagacctga tttaaaaaga ggtcttttat cagaaaatga 1020
agagcagatg gtcattgatc ttcatgccca acttggcaat aggtttatcc tctttttatt 1080
caaaataatt gttatttcat attataaaca taatttactt accttatttg acattgtaac 1140
taactcataa tataatgaaa tgtttaaaga ttatggacat tagatttcaa tattaaaggt 1200
attggagaag cacaaaagtc attatatgac gcaaacttta tcactttttt tgcatgaaag 1260
agattggcta atccacattt ttaattactc atattttctt tcaaacccaa tatagtttaa 1320
ttaagtcggt gtgatgaaaa tgtttgaaca gtcgaaatca ttagtgaaat tatcacttat 1380
aaaattttca aatattttat ttttattttt gtgcagatgg tcaaagattg cctctcatct 1440
accaggaaga actgataatg aaattaagaa ccattggaac acacacataa agaaaaaact 1500
aaggaagatg ggtattgacc ctatgaccca taagcctctc tctgaacaag acggtgcgca 1560
acaacaagct caggggagaa agaaaagctt agtgtctcgt gatgagaaga acacaaacca 1620
aggccaagaa gatcaacaac aaactagaaa agaagaagat caacaacatc aactagggaa 1680
agatttggag aagaacaaca cacccatttc tactgatgat gggttttgca ttgatgatat 1740
cccattactc agtccacatg agatatttgt ggacatctct tctgctcacc atcatactag 1800
tgatgataat gccaacatta acattagtaa ctccacttca ccttcttcgt cttcctcttc 1860
tatctcgtcg tgcatatcat cactaccggg tgatgagttc tcaaagtttc ttgatgaaat 1920
ggagattgtt gacctcaagt ggctctcatc cgatgattca tcagggggta acattaatta 1980
caacgacggc aagttcaaca acaatgttga tacgatgagc ttgtgggaca tcaatgattt 2040
gagcagcttg gaattgttta tgaatgatca tgatgatagt gtggttgaag cggatgttca 2100
agaatggttt tagatcatga ttcatggaca tttgatcttc tttaactttt agtttttttt 2160
tcttctcatg ttgtttttaa ttgtttttgt ttgtttgttt gggtttggcc ttggtggtgg 2220
atgattaggt gtaaaagtac atatgtaatt aaagattgca attgtgaaca tacttttctc 2280
tgtttaacct cgtat 2295
<210> 38
<211> 2240
<212> DNA
<213>Chinese cabbage (Brassica rapa)
<400> 38
cttgtttgag catatctcta gactaatata tatatatata tatatatata tagagagaga 60
gacagagggt gcgaggagtg aagatgggga ggcagccatg ttgtgacaaa gtagggctga 120
agaaagggcc atggacagct gaggaagaca agaagctcat caacttcatc ctcaccaatg 180
gccactgctg ttggagagct cttcccaagc tttctggtat attttctttc tttcttttct 240
ccacatgcga cgtccttggg atttctcatg tgtaaaaagt tcgttttttt cttaacacat 300
gtgtttttac attttctcct accaaaaaaa cgatatgcta tttttgatat atggattatc 360
gtatcttaaa agtgaacttt cttaaaacgt ccccttttat tcctactgat ttctatttta 420
tctattttct tgtttttgct gacactaata ataatacttc tctacccttt tttaattaat 480
ttgcatgagt tcttttgcta tatctatact agtatagttt tgcaccaatc aaatgaattt 540
actattttca gtaatagttt caatgcagga gaataatatt cattgttacc gtcctttttg 600
aaatggaata attctctatc ttttcgactt acgaaatccg atcaatcatg gtgtttggcc 660
cggacaaaaa tcaatgtttg atactggtgg tcctacacgt tattatttgt tcttgataat 720
tttttgttct gttttgtttt cacttgttcc ttcttaatca gtttatctct cgtatattta 780
actagtttcc aatcattctg atcgttaatc tagttacttt ggttaatcaa ttaaatcagg 840
actcctgagg tgcggaaaaa gctgcagact aagatggatc aattatttga gacctgattt 900
aaaaagaggt cttttatcag attgtgaaga acagatggtc attgatcttc atgcccaact 960
tggcaatagg tttattctct ttctcttgaa aatcattgtt attccatatt ttaaaaaatc 1020
ctcaaattta taaacagtaa ttttacctac ctttttaaaa aaaaactaat tttacctgcc 1080
ttaactttga tgttgtaact aactcgtaat aaaaatataa aaatattgtg gccattagat 1140
ttcaatatta ttaaggtcac ggaggaacac aaaagtcaca atagaacact gaacacgcaa 1200
actttactat ttttttctgt atgaaagaga ttggccaatc tacatctcat atttaaattt 1260
aatcgtgcgt ttttaaccac gtacggtagt ttaatttagt aagtctgatg ataatgactg 1320
aacagtcgaa atcatgagtt aattaaactt acttaagtat cgaatcattt taatttttgt 1380
gcagatggtc aaagattgcc tctcatctac caggaagaac tgataatgaa ataaagaacc 1440
attggaacac acacataaag aaaaaactaa ggaagatggg cattgaccct atgacccata 1500
agcctctccc tgaacaagac gggtcacagc aagctcaagg gagcaagagt ttagtgcctc 1560
atgatgacaa gaacaaaaaa caagaccaag aagataaaca aactaaagaa aaacaagaac 1620
accatcaact agggatagat ttggacaaga gcaacaaaac aatatctact gatgatgggt 1680
tttgcattga tgaagtcccg ttgctcgatc cacatgagat attactggac atctcttttg 1740
ctgatcatca tactagtgat gaaaatgctc acattaacat tagtaactcc acttctcctt 1800
cttcctcttc tacctcgtcg tgtatatcat cagtaccggg tgaggagttc tcgaagtttc 1860
ttgatgaaat ggacactatt gacctcaagt ggctctcatc cgatcattca tcagaggata 1920
atattattta caaagacgac aagttccaca acaatgttga tacgatgaac ttgtgggaca 1980
taaattattt gagcagcttg gaattgttta tgaatgatca tgatgatggt tttgttggaa 2040
gcggatgttc aagaatggtt tagatcaata tacatgacca ttttactttc agtttttttt 2100
ttcatgttgt ttttaattag ttctttttgt ttgttttcga agtgggcgat ttggatttgg 2160
ccttggtgtt gcaatttagt ggatgattag gtgtaaaata catatgtaat aaatattgca 2220
attgtgaaca tacttttctc 2240
<210> 39
<211> 2259
<212> DNA
<213>wild cabbage (Brassica oleracea)
<400> 39
ggaaatacaa cattgtcagt atattagata tatttgagca catctctaga ctatataaag 60
taagaaaaat atatatagag agaggagaga gatggggagg cagccatgtt gtgacaaagt 120
aggcttgaag aaagggccat ggactgttga agaagacaag aagctcatca acttcatcct 180
caccaatggc caatgctgtt ggagagctct tcccaaactt tctggtcgat tttctctctt 240
tatttcctcc ttaaacgaca tcttttggga tttctcatgt gtaaaagttc actttcttgc 300
ttcttgtgtg tttagccttt ctctacacca actgatgcta ttttttgggt gctatttctc 360
tacaccgacg aaactgatgc tcttatttag gatctcgtat tttaaaagtt tcacttcctt 420
aaaacgtcca attttattac tagtaattta tatttctcta ctttcttctt gtcagcagtt 480
tttatagtaa tattttctct acttttgtgt aaattaattt gcattagtta ttttggtata 540
tgcatgctag tatagatgtt caccaacaat caaatatacc tttagaaatt attttcaaga 600
aacaattttg atgcagaaga atcatatgaa ttcttaactt tcctttttaa aatagaatat 660
ttctctatcg gttggaccta aaaacaaaag tctcaaaaaa acatagtgct tgatattcgt 720
ggtcctcaca cgttattatt tgatcttgat caattttttt gttttgtttt tggctttttg 780
tttagtgctt ccttcctagt caaaatatat ttcgtatggt tttaactttc aatcagtcca 840
attgttaatg taattacttt ggttaattaa ctaaatgcag gactattgag gtgtggtaaa 900
agctgcagat taagatggat aaattatttg agacctgatt taaaaagagg tcttttatca 960
gaaaatgaag agcagatgat cattgatctt catgcccaac ttggcaatag gtttgctctc 1020
tttttcttca aaataattgt tatttcatat tataaacata atttacttac gttaacttga 1080
cattgtaact aactaataat ataataaaat atttaaagat tatggccatt tgatttcaat 1140
attattaagg gtattggaga aacacaaaag tcattatatg acgcaaatta actttatcac 1200
ttttttgcat gaaagagatt ggctaatcca catctttatt tactcatatt ttctttttaa 1260
ccccagtact ttaattaagt cggtgtgatg aaaatgtttg aacagtcgaa atcattagtt 1320
aaaatcacac ttataaaatt ttcaaatatt ttatttttat tttttgtgca gatggtcaaa 1380
gattgcctct catctaccag gaagaactga taatgaaatt aagaaccact ggaacacaca 1440
cataaagaaa aaactaagga agatgggtat tgaccctatg acccataagc ctctctctga 1500
acaagaaggt gcgcagcaac aagctcaggg gacaaagaaa agcttagtgt ctcgtgatga 1560
gaagaaaaga aaccaaggcc aagaagatca acaaactaga aaagaagaag atcaacaaca 1620
tcaactaggg aaacatttgg acaagaacaa cacacccatt tctactgatg atgggttttg 1680
cattgatgat atcccattac tcaatccaca tgagatattt gtggacatct cttctgctca 1740
ccatcatact agtgatggta atgccaacat taacattagt aactccactt caccatcttc 1800
gtcttcctct cctacctcgt cgtgcatatc atcactacca ggtgatgagt tctcaaagtt 1860
tcttgatgaa atggagattg ttgacctcaa gtggctctca tccgatgatt cgtcaggggg 1920
tgacattaat tacaaagacg gaaagttcaa taacaatgtt gatacgatga acttgtggga 1980
catcaatgat ttgagcagct tggaattgtt tatgaatgat cacgatgata gtgtggttgg 2040
aagcggatgt tcaagaatgg ttttagatca tgattcatgg acatttgatc ttctttaact 2100
tttagttttt ttttcttctc ttgttgtttt taattgtttt ttgtttgttt gtttgggttt 2160
ggcctcggtg ttgcagttta gtggatgatt aggtgtaaaa gtacatatgt aattaaagat 2220
tacaattgtg aacatacttt tctctgttta ttttgacat 2259
<210> 40
<211> 2258
<212> DNA
<213>wild cabbage (Brassica oleracea)
<400> 40
atatacatta taacttgtaa gtatattagg tacttgtttg agcatatctc tagactaata 60
gatatatata tagagagaga gagagccaga gggtgcgagg agtgaagatg gggaggcagc 120
catgttgtga caaagtaggg ctgaagaaag ggccatggac agctgaggaa gacaagaagc 180
tcatcaactt catcctcacc aatggccact gctgttggag agctcttccc aagctttctg 240
gtatatcttc tctctttctt tcttttctcc atatgcgacg tccttgggat ttctcatgtg 300
taaaaagttt ttttttctta acacacgtgt ttttacattt tctcttacca aaaaaacgat 360
atgctatttt tgatatatgg attatcgtat tttaaaagtt aactttctta aaacgtcccc 420
ttttattcct actgatttct attttatcta ttttcttgtt tttgctgaca ctgataataa 480
tacttctcta ccttttttaa ttaatctgca tgagttcttt tgctatatct atactagtat 540
agttttgcac caatcaaatg aatttactat tttcagtaat agtttcaatg caggagaatc 600
atattcattg ttaccgtcct ttttgaaatg gaataattct ctatcttttc gacttacaaa 660
atccgatcaa tcatggtgtt tggcccggac aaaaatcagt gtttgatact ggtggtccta 720
cacgttatta tttgttcttg ataatttttt gttctgtttt gttttgtttt cacttgttcc 780
ttcttattca gtttatctct cgtatattta actagtttcc aatcattctg atcgttaatc 840
taattacttt ggttaatcaa ttaaatcagg actcttgagg tgtggaaaaa gctgcagact 900
aagatggatc aattatttga gacctgattt aaaaagaggt cttttatcag aatgtgaaga 960
acagatggtc attgatcttc atgcccaact tggcaatagg tttattctct ttctctggaa 1020
aatcattgtt attccatatt tttaaaaatc ctcaaattta taaacagtaa ttttacctac 1080
cttttaaaaa aaactaattt tacctgccaa actttgatgt tgtaactaac tcgtaataaa 1140
aatataaaaa atattgtggc cattagactt caatattatt aaggtctcgg aggaacacaa 1200
aagtcacaat agaacactga acacgcaaac tttactattt cttctgtatg aaagagattg 1260
gccaatctac atctcatatt taaatttaat cgtgcgtttt taaccacgta cggtatagtt 1320
taatttagta ggtctgatga taatgactga acagtcgaaa tcatgagtta attaaactta 1380
cttaagtttc gaatcatttt aatttttgtg cagatggtca aagattgcct ctcatctacc 1440
aggaagaact gataatgaaa taaagaacca ttggaacaca cacataaaga aaaaactaag 1500
gaagatgggc attgacccta tgacccataa gcctctccct gaacaagacg gttcacagca 1560
agctcaaggg agcaagggtt tagtgcctca tgatgacaag aacaaaaaac aagaccaaga 1620
agataaacaa actaaagaaa aacaagaaca ccatcaacta gggatagatt tggacaagag 1680
caacaaaaca atatctactg atgatgggtt ttgcattgat gaagtcccgt tgctcgatcc 1740
acatgagata ttactggaca tctcttttgc tcagcatcat actagtgatg aaaatgctca 1800
cattaacatt agtaactccg cttctccttc ttcctcttct acctcgtcgt gtatatcatc 1860
agtaccgggt gaggagttct cgaagtttct tgatgaaatg gagactattg acctcaagtg 1920
gctctcatcc gatcattcat caggggataa tattatttac aaagacgaca agttccacaa 1980
caatgttgat acgatgaact tgtgggacat aaattatttg agcagcttgg aattgtttat 2040
gaatgatcat gatgatggtt ttgttggaag cggatgttca agaatggttt agatcaatat 2100
tcatgaccat tttactttca gttttttttt tcatgttgtt tttaattagt tctttttgtt 2160
tgttttcgaa gtgggcgatt tggatttggc cgtggtgttg caatttagtg gatgattagg 2220
tgtaaaatac atatgtaata aagattgcaa ttgtgaac 2258
Claims (8)
1. striking application of the expression for dropping cabbage type rape and its parent species MYB43 in raising disease resistance of plant, feature exists
In: the full length cDNA sequence of cabbage type rape MYB43 family is SEQ ID NO.25, SEQ ID NO.26, SEQ ID
Shown in NO.27 and SEQ ID NO.28, the full length cDNA sequence of parent species Chinese cabbage MYB43 family is SEQ ID NO.29, SEQ
Shown in ID NO.30, the full length cDNA sequence of parent species wild cabbage MYB43 family is SEQ ID NO.31, SEQ ID NO.32 institute
Show.
2. application according to claim 1, it is characterised in that: the overall length gDNA sequence of cabbage type rape MYB43 family
It is classified as SEQ ID NO.33, SEQ ID NO.34, shown in SEQ ID NO.35 and SEQ ID NO.36, parent species Chinese cabbage
The overall length gDNA sequence of MYB43 family is parent species wild cabbage MYB43 family shown in SEQ ID NO.37, SEQ ID NO.38
Overall length gDNA sequence be SEQ ID NO.39, SEQ ID NO.40 shown in.
3. application according to claim 1, it is characterised in that: the method for striking drop MYB43 is, for cabbage type rape, white
Dish, wild cabbage MYB43 gene family construct rna interference vector, and the transformant of acquisition is then converted cabbage type rape or its parent
Species obtain the plant for striking drop MYB43.
4. application according to claim 3, it is characterised in that: the rna interference vector is as shown in SEQ ID NO.25
604~1084bp shown in 602-1081bp, SEQ ID NO.26,578~1058bp, SEQ ID shown in SEQ ID NO.27
606~1086bp shown in No.28,580 shown in 602~1081bp, SEQ ID No.30 shown in SEQ ID No.29~
The antisense fragments of 597~1077bp shown in 1060bp, SEQ ID No.31,604~1084bp shown in SEQ ID No.32
It is inserted between the CaMV35S promoter and BnPAP2 Intron II of pFGC5941M carrier and obtains;
Or 602-1081bp shown in SEQ ID NO.25,604~1084bp shown in SEQ ID NO.26, SEQ ID NO.27
Shown in 602 shown in 606~1086bp, SEQ ID No.29 shown in 578~1058bp, SEQ ID No.28~
580~1060bp shown in 1081bp, SEQ ID No.30,597~1077bp, SEQ ID shown in SEQ ID No.31
The sense fragment of 604~1084bp shown in No.32 is inserted into pFGC5941M between BnPAP2 Intron II and OCS3 ',
Form RNAi carrier pFGC5941M-BMYB43I.
5. application according to claim 3, it is characterised in that: the transformant is the crown gall containing the rna interference vector
Agrobacterium tumefaciens attachment.
6. the described in any item applications of Claims 1 to 5, it is characterised in that: shown plant is cabbage type rape, Chinese cabbage or sweet
It is blue.
7. the expression for striking drop cabbage type rape and its parent species MYB43 is reducing cabbage type rape or its parent species stem core
Application in cup fungi scab length, it is characterised in that: the full length cDNA sequence of cabbage type rape MYB43 family is SEQ ID
NO.25, SEQ ID NO.26, shown in SEQ ID NO.27 and SEQ ID NO.28, the overall length of parent species Chinese cabbage MYB43 family
CDNA sequence is shown in SEQ ID NO.29, SEQ ID NO.30, and the full length cDNA sequence of parent species wild cabbage MYB43 family is
Shown in SEQ ID NO.31, SEQ ID NO.32.
8. the expression for striking drop cabbage type rape and its parent species MYB43 is improving cabbage type rape or its parent species unit plane
Application in product yield, it is characterised in that: the full length cDNA sequence of cabbage type rape MYB43 family is SEQ ID
NO.25, SEQ ID NO.26, shown in SEQ ID NO.27 and SEQ ID NO.28, the overall length of parent species Chinese cabbage MYB43 family
CDNA sequence is shown in SEQ ID NO.29, SEQ ID NO.30, and the full length cDNA sequence of parent species wild cabbage MYB43 family is
Shown in SEQ ID NO.31, SEQ ID NO.32.
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CN113122548A (en) * | 2021-04-23 | 2021-07-16 | 合肥工业大学 | Encoding gene for improving cadmium tolerance of plants and repairing cadmium pollution of soil by plant genetic engineering |
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