CN110241220B - Peripheral blood transcriptional gene marker for breast cancer detection and application thereof - Google Patents

Peripheral blood transcriptional gene marker for breast cancer detection and application thereof Download PDF

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CN110241220B
CN110241220B CN201910699042.1A CN201910699042A CN110241220B CN 110241220 B CN110241220 B CN 110241220B CN 201910699042 A CN201910699042 A CN 201910699042A CN 110241220 B CN110241220 B CN 110241220B
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程昌明
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Beijing Nachang Jewelry Firm Co ltd
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Abstract

The invention discloses a peripheral blood transcription gene marker for detecting breast cancer, which comprises: blood cell characteristic gene sequences of the breast cancer shown by SEQ ID NO. 1-SEQ ID NO. 10. The invention also discloses application of the gene marker in preparation of a breast cancer detection product. The invention carries out early screening detection on the breast cancer by analyzing the expression condition of the transcriptional gene markers related to the breast cancer in the peripheral blood in a combined manner, has the advantages of high sensitivity and strong specificity, takes the peripheral blood which is most easily collected clinically as a detection sample, is safe and simple to sample, is very suitable for early screening and auxiliary diagnosis of the breast cancer of large-scale people, and has wide application prospect.

Description

Peripheral blood transcriptional gene marker for breast cancer detection and application thereof
Technical Field
The invention relates to the technical field of molecular biology, in particular to a blood cell transcription gene marker for breast cancer detection and application thereof.
Background
Breast cancer is a common malignant tumor in adult women and is also one of the leading causes of cancer death in adult women. Breast cancer accounts for the first and second new morbidity and mortality among female malignancies worldwide. There are approximately 7.9 million new cases per year, accounting for 21% of the total number of malignancies in all women. The annual average incidence rate of breast cancer is 30.30/10 ten thousand worldwide, and the adjustment rate (the world regulation rate) of the world population is 32.97/10 ten thousand. Nearly 60% of new cases of breast cancer occur in developed countries. In developed countries, the number of new breast cancer cases is about 25% of all female malignancies. The incidence rate is 79.09/10 ten thousand, and the world adjustment rate is 56.40/10 ten thousand. In developing countries, the number of new cases of breast cancer is about 17% of all malignant tumors, the incidence rate is 15.89/10 ten thousand, and the frequency of the occurrence is 20.33/10 ten thousand. The incidence of breast cancer in China is at a low level, but the incidence is on a rapid growth trend in recent years, and particularly the rising trend in rural areas is obvious in the last 10 years. In 2013, the incidence rate of breast cancer of women in China reaches 21.6/10 ten thousands of people, and the lung cancer is the first place.
Early detection of breast cancer and timely treatment are critical to ensure a good prognosis, since, in 90% of breast cancer deaths, distant metastasis is associated. At present, the screening means for breast cancer mainly comprises patient self-examination, doctor palpation (CBE), ultrasonic Screening (US) and breast molybdenum target X-ray examination (MAM), both of which belong to palpation, and are generally possible to be found after the tumor is larger than 2cm, while the US can only find tumor mass of more than 0.5cm, and the MAM is less advantageous for young women. Therefore, clinically accepted breast cancer patients are all imagewise detectable, with about 1/3 of the patients having had distant lymph node metastasis and 2/3 of the patients being locally advanced or advanced.
With the progress of treatment methods and clinical medicines for breast cancer, the survival rate of breast cancer patients is effectively improved, the 5-year survival rate reaches 90%, but the mortality rate of all female malignant tumors is still the second place. Because the mammary gland is an important characteristic of women, breast cancer surgery is a better treatment means, but has serious damage to the quality of life and the psychology of women. Therefore, how to safely and effectively discover early patients, perform early non-operative treatment or early breast protection operation, and improve the cure rate and the life quality of the patients is a focus of attention at home and abroad at present.
Blood is the largest tissue organ of the human body, and blood cells are few, and are cell types capable of exchanging information with almost all tissue cells. When abnormal tumor cells are generated in vivo, the immune system performs immune monitoring function, and blood cells (including immune cells such as leucocytes) participate in signal transmission and communication of the whole body immune system, and the gene expression of the blood cells changes correspondingly. The gene expression change of blood cells is far earlier than the obvious sign change of an organism caused by diseases, so that micro information of malignant diseases such as in vivo tumors and the like can be sensitively captured by closely monitoring the gene expression signal of the blood cells, and reliable evidence is provided for early detection and monitoring of the tumors. In addition, the blood cell transcriptional gene marker detection is used as a simple and noninvasive detection mode, so that the detection is easy to accept by a detected person, the detection compliance is high, and the method has a very great application value in early screening/diagnosis of malignant tumors such as breast cancer.
Disclosure of Invention
The invention provides a blood cell transcription gene marker combination for detecting breast cancer, aiming at the problem that the breast cancer is difficult to find and diagnose in early stage at present, the gene marker combination is used for screening and diagnosing in early stage of breast cancer, has high sensitivity and specificity, and is safe and simple to take samples because peripheral blood which is most easily collected in clinic is adopted for detection, thereby being very suitable for screening and auxiliary diagnosis in early stage of breast cancer of large-scale crowds.
In order to solve the technical problems, the invention is realized by the following technical scheme:
in one aspect of the invention, a combination product comprising a plurality of polynucleotides or fragments thereof is provided, the polynucleotides are differentially expressed in peripheral blood cells of a population with normal distribution of the same age, and the sequences of the polynucleotides are blood cell characteristic gene sequences of the breast cancer shown in SEQ ID NO. 1-SEQ ID NO. 10.
In another aspect of the invention, a composition is provided, which comprises primers and/or probes for detecting differential expression of genes in peripheral blood cells of a population with normal age distribution and breast cancer, wherein the sequences of the genes comprise blood cell characteristic gene sequences of the breast cancer shown in SEQ ID NO. 1-SEQ ID NO. 10.
In another aspect of the invention, the use of the above combination product comprising a plurality of polynucleotides or fragments thereof for the preparation of a product for the detection of breast cancer is also provided.
Preferably, the product for detecting breast cancer comprises: the product for detecting the breast cancer by using real-time quantitative PCR, RNA sequencing or gene chip.
The product for detecting the breast cancer by using the real-time quantitative PCR comprises a primer for specifically amplifying a blood cell characteristic gene sequence of the breast cancer shown by SEQ ID NO. 1-SEQ ID NO. 10.
The product for detecting the breast cancer by RNA sequencing comprises messenger RNA sequences for detecting blood cell characteristic gene sequences of the breast cancer shown by SEQ ID NO. 1-SEQ ID NO. 10.
The product for detecting breast cancer by using the gene chip comprises: a probe hybridized with blood cell characteristic gene sequences of the breast cancer shown in SEQ ID NO. 1-10. The gene chip is preferably a gene expression profiling chip.
In another aspect of the invention, the invention also provides a kit for detecting the breast cancer, which comprises a primer specific to the blood cell characteristic gene sequence of the breast cancer shown in SEQ ID NO. 1-SEQ ID NO. 10.
Preferably, the sequence of the primer is shown in SEQ ID NO. 11-SEQ ID NO. 30.
In another aspect of the invention, the invention also provides a kit for detecting the breast cancer, which comprises a probe specifically aiming at the blood cell characteristic gene sequence of the breast cancer shown in SEQ ID NO. 1-SEQ ID NO. 10.
Preferably, the sequence of the probe comprises a nucleotide sequence shown in SEQ ID NO. 31-SEQ ID NO. 40.
In another aspect of the invention, the invention also provides a gene chip for detecting the breast cancer, which comprises oligonucleotide probes hybridized with blood cell characteristic gene sequences of the breast cancer shown in SEQ ID NO. 1-SEQ ID NO. 10.
The kit or the gene chip can detect the expression condition of the breast cancer characteristic gene sequences shown by SEQ ID NO. 1-SEQ ID NO.10 in peripheral blood cells of a detected person, and then a prediction model is constructed by combining statistical methods such as a boosting algorithm and the like according to the up-regulation or down-regulation information of the gene expression to judge the probability of the breast cancer suffered by the detected person, thereby realizing the purposes of early screening and diagnosing the breast cancer.
In the present invention, the terms "blood cell transcriptional gene marker" or "blood cell characteristic gene of breast cancer" or similar terms are used interchangeably, and they have the same meaning and all represent genes that can be used for early screening and diagnosis of breast cancer, and significant changes in the expression levels of the genes can be used as an index for diagnosis of breast cancer.
The term "blood cell" refers to an immune cell such as a leukocyte in peripheral blood of a human body. The information exchange between the disease tissue and the leucocyte in blood is realized, so that the in vivo immune response and repair mechanism are activated, the gene expression of the leucocyte is specifically changed, the response of the immune system to the disease is usually earlier than the tissue response, and the breast cancer can be screened and diagnosed at an early stage by detecting the gene expression specific change of the leucocyte and other immune cells in peripheral blood.
The term "primer" refers to an oligonucleotide that, when paired with a strand of DNA, initiates primer extension synthesis product in the presence of a suitable polymerization reagent. To maximize amplification efficiency, the primer is preferably single-stranded. The length of the primer depends on many factors, including: application area, temperature employed, template reaction conditions, other reagents and primer sources. The skilled person can design the primers autonomously according to the breast cancer signature genes and specific requirements of the present invention.
The term "probe" refers to a molecule that binds to a specific sequence or subsequence or other portion of another molecule. Unless otherwise indicated, the term "probe" generally refers to a polynucleotide probe that is capable of binding to another polynucleotide (often referred to as a "target polynucleotide") by complementary base pairing. Depending on the stringency of the hybridization conditions, a probe can bind to a target polynucleotide that lacks complete sequence complementarity to the probe. The probe may be directly or indirectly labeled.
Those skilled in the art can design other probes that can be used to implement the present invention according to the breast cancer characteristic genes of the present invention and specific requirements, and are not limited to the probes specifically used in the embodiments of the present invention.
The term "gene chip" refers to a substrate having oligonucleotide probes deposited with different known sequences at known discrete locations on the surface of the substrate. The substrate may be silicon or glass, have the thickness of a glass slide or cover slip, or may be composed of other synthetic polymers.
The peripheral blood transcription gene marker combination for early screening and diagnosing breast cancer adopts an ROC curve (receiver operating characteristic curve) tool to measure the performance of the gene marker combination. Disease diagnosis is the problem of distinguishing between patients and normal persons, and is mathematically a dichotomous problem, i.e., dividing instances into positive or negative, so that a combination of genetic markers essentially behaves as a classifier. In the case of correct classification, four situations occur: true Positive (TP) if an instance is Positive and is predicted to be Positive; if the example is negative but predicted to be Positive, it is called False Positive (FP). Accordingly, if an instance is Negative and predicted to be Negative, it is referred to as True Negative (TN), and if an instance is positive but predicted to be Negative, it is False Negative (FN). The classification ability of a classifier is measured in terms of sensitivity (sensitivity) and specificity (specificity). The sensitivity is a True Positive Rate (TPR), and the calculation formula is TPR = TP/(TP + FN), which indicates the proportion of the positive examples identified by the classifier to all the positive examples. The specificity is True Negative Rate (TNR), and the calculation formula is TNR = TN/(FP + TN), which represents the proportion of the negative examples identified by the classifier to all negative examples.
The marker genes of the invention can be used to design specific oligonucleotide probes and corresponding primers. Such probes and primers can be of any length that specifically hybridizes to a marker gene sequence and is at least about 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 35, 40, 50, 75, 100, 150, 200, 300, 400, 500 nucleotides in length, and the probes can be up to the full length of the marker gene sequences of the present invention. The probe may also comprise other sequences at its 5 'and/or 3' end so as to be capable of extending beyond the target sequence to which it is hybridised.
When a nucleic acid amplification method is used, these probes and primers enable rapid analysis of peripheral blood samples, i.e., detection or quantitative determination of the transcription products (mainly mRNA) of the marker genes. Such methods include any method or technique known in the art or described herein for replicating or increasing the copy number or content of a target nucleic acid or its complement.
The blood cell transcription gene marker disclosed by the invention is used for detecting breast cancer, has the advantages of high sensitivity and strong specificity, takes peripheral blood which is most easily collected clinically as a detection sample, is safe and simple to sample, is suitable for early screening and auxiliary diagnosis of breast cancer of large-scale crowds, is beneficial to early discovery of breast cancer, improves the cure rate, and has important significance for human health development.
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The present invention will be described in further detail with reference to the accompanying drawings and specific embodiments.
FIG. 1 is a boxplot of 107 cases of breast cancer (breast loss) and 44 cases of Normal Control (Normal Control) screened by the blood cell characteristic gene combinations according to the present invention;
FIG. 2 is a ROC AUC graph of breast cancer diagnosis using a prediction model constructed using 10 peripheral blood cell transcriptional gene markers (10-gene panel) according to the present invention. As a control, ROC AUC curves for breast cancer diagnosis of individual gene markers are also listed.
Detailed Description
The invention is based on the quantitative analysis of the whole gene expression profile of blood cells, through the quantitative analysis of the gene expression status of total RNA of peripheral blood, compare the difference of the blood cell gene expression of breast cancer and normal population, through the characteristic recursion Elimination (recurved feature Elimination) method to screen out 10 blood cell gene expression signals (transcription gene markers, messenger RNA) that are characteristic of breast cancer from the blood cell gene expression profile: DDIT4, APP, FKBP1A, PBX2, YWHAQ, HERC2P2, LUC7L3, WSB1, BCLAF1, FAM126B. Based on the 10 breast cancer transcriptional gene markers obtained by screening, quantitatively detecting the relative expression data of the 10 breast cancer transcriptional gene markers in the peripheral blood of a detected person by a fluorescent quantitative RT-PCR (reverse transcription-polymerase chain reaction), a gene expression profile chip or an RNA (ribonucleic acid) sequencing technology, constructing a breast cancer diagnosis model by adopting a logistic regression algorithm to obtain a decision score (decision score) of a sample, and if the decision score is greater than or equal to 0, judging the sample as breast cancer; and if the decision score is less than 0, judging the result to be normal.
Example 1 screening of peripheral blood characteristic Gene markers for Breast cancer
The screening of the breast cancer peripheral blood characteristic gene comprises the following steps:
1) Using PAXgeneTM55 samples of peripheral Blood confirmed to be diagnosed as breast cancer patients and 50 normal people by pathological examination were collected from Blood RNA Tube Blood collection tubes, and each sample was collected2-3mL of peripheral blood was collected.
2) Total RNA of the peripheral Blood sample was extracted using PAXgene Blood RNA Kit extraction Kit. The RNA samples were tested for fragment integrity (RIN) using an Agilent Bioanalyzer 2100 and for purity using a Nano1000 micro-UV spectrophotometer. All RNA samples must meet the following quality control conditions: the RNA yield is more than 2 micrograms, the ratio of 28S/18S peak is more than 1, the RIN value is more than 7, and the absorbance ratio of 260nm/280nm is more than 1.8.
3) The Gene expression signal of the RNA sample was detected by Affymetrix Gene Profiling Array cGMP U133P2 chip (human whole Gene expression Profiling chip).
4) The MAS5 statistical method in Affymetrix Expression Console software is used for carrying out Normalization processing (Normalization) on the detection result of the gene Expression profile chip of each sample, and genes with proper Expression in all samples are selected for subsequent analysis.
5) Blood cell gene expression signals with modest expression in all samples were selected for subsequent analysis.
6) A characteristic recursion elimination method is used for screening blood cell characteristic gene expression signals caused by the breast cancer, and 10 genes with the highest prediction accuracy (accuracycacy) on the breast cancer are obtained and used as gene markers.
7) The blood cell characteristic genes of the 10 breast cancers are detected by a real-time fluorescent quantitative PCR method, and the result shows that the expression up-regulation or down-regulation trends of all the 10 characteristic genes on a PCR platform and an expression profile chip platform are consistent. The sequences of 10 breast cancer transcriptional gene markers are shown in table 1 below.
TABLE 1 Gene sequences of 10 Breast cancer Gene markers
Figure BDA0002150242250000051
Figure BDA0002150242250000061
8) Based on the 10 gene markers obtained by screening, a logistic regression algorithm is utilized to construct a breast cancer diagnosis model:
Figure BDA0002150242250000062
wherein, P is the risk probability of the subject suffering from breast cancer; b0To b10Respectively corresponding logistic regression model parameters; delta Ct1To Δ Ct10Difference values of quantitative PCR cycle number Ct values of 10 breast cancer gene markers and an internal reference gene respectively; x is a decision score (decision score), also known as logistic regression log likelihood ratio (log likelihood ratio). Judging the detection result with the decision score X value being more than or equal to 0 as positive, namely, judging the patient with breast cancer; value of X<The result of detection of 0 is judged as negative, i.e., normal.
Example 2 detection of Breast cancer Using the selected markers for the peripheral blood characteristic genes of Breast cancer
1. The method comprises the following steps:
1) Collecting peripheral blood samples of the sample to be detected: use of PAXgeneTMBlood RNA Tube collected 2ml subjects of elbow vein peripheral Blood;
2) Extracting and purifying total RNA in a peripheral blood sample of a sample to be detected: extracting and purifying total RNA in peripheral Blood by using a PAXgene Blood RNA Kit extraction Kit, identifying the integrity and yield of the extracted total RNA fragment by using an Agilent BioAnalyzer model 2100 micro electrophoresis analyzer, and detecting the purity of an RNA sample by using a Nano1000 micro ultraviolet spectrophotometer;
3) Reverse transcription reaction: performing Reverse Transcription reaction by using a High-Capacity cDNA Reverse Transcription kit of Life Techonlgy company and taking Olig (dT) as a Reverse Transcription primer by using total RNA as a template to synthesize cDNA;
TABLE 2 reaction System for reverse transcription Synthesis of cDNA
Figure BDA0002150242250000063
Figure BDA0002150242250000071
4) Fluorescent quantitative RT-PCR detection: according to messenger RNA (mRNA) sequences of 10 blood cell characteristic genes of breast cancer, specific primers SEQ ID NO. 11-SEQ ID NO.30 are designed (wherein, the primers SEQ ID NO. 11-SEQ ID NO.12 are used for specifically amplifying the gene marker of SEQ ID NO.1, the primers SEQ ID NO. 13-SEQ ID NO.14 are used for specifically amplifying the gene marker of SEQ ID NO.2, the primers SEQ ID NO. 15-SEQ ID NO.16 are used for specifically amplifying the gene marker of SEQ ID NO.3, the primers SEQ ID NO. 17-SEQ ID NO.18 are used for specifically amplifying the gene marker of SEQ ID NO.4, the primers SEQ ID NO. 19-SEQ ID NO.20 are used for specifically amplifying the gene marker of SEQ ID NO.5, the primers SEQ ID NO. 21-SEQ ID NO.22 are used for specifically amplifying the gene marker of SEQ ID NO.6, and the primers SEQ ID NO. 23-SEQ ID NO.24 are used for specifically amplifying the gene marker of SEQ ID NO.7, primers SEQ ID NO. 25-SEQ ID NO.26 are used for specifically amplifying the gene marker SEQ ID NO.8, primers SEQ ID NO. 27-SEQ ID NO.28 are used for specifically amplifying the gene marker SEQ ID NO.9, primers SEQ ID NO. 29-SEQ ID NO.30 are used for specifically amplifying the gene marker SEQ ID NO. 10), specific probes SEQ ID NO. 31-SEQ ID NO.40 are designed (wherein SEQ ID NO. 31-SEQ ID NO.40 are respectively probe sequences of the characteristic gene sequences of SEQ ID NO. 1-SEQ ID NO. 10), the primers SEQ ID NO. 11-SEQ ID NO.30 are used as primers, the probes SEQ ID NO. 31-SEQ ID NO.40 are used as probes or SYBR Green dye capable of nonspecifically combining with PCR amplification fragments is used, cDNA obtained by reverse transcription is used as an amplification template to perform real-time fluorescent quantitative RT-PCR reaction, the relative mRNA content of the 10 gene markers in the peripheral blood samples was obtained.
The sequence of the fluorescent quantitative PCR amplification primer is as follows:
DDIT4 gene
A forward primer: 5 'CACTTCTGAGTTCAGCAAACG 3' (SEQ ID NO. 11)
Reverse primer: 5'ACGAGAAGCGGTCCCAAAG 3' (SEQ ID NO. 12)
APP Gene
A forward primer: 5'CCGCTCTGCAGGCTGTTC 3' (SEQ ID NO. 13)
Reverse primer: 5'TCTGCGCGGACATACTTCTTT 3' (SEQ ID NO. 14)
FKBP1A gene
A forward primer: 5'GGATGCTTGAAGATGGAAAGAAA 3' (SEQ ID NO. 15)
Reverse primer: 5 'CCTGCTTGCTTGCTAGCATAAACTTAAA 3' (SEQ ID NO. 16)
PBX2 gene
A forward primer: 5 'CTGCGCGCTCCCGTTTCCT 3' (SEQ ID NO. 17)
Reverse primer: 5 'GGACCTCAGTGCCTGTTTG 3' (SEQ ID NO. 18)
YWHAQ gene
A forward primer: 5 'CCTGGAGGGTCATCTAGCAT 3' (SEQ ID NO. 19)
Reverse primer: 5 'ACTTTCTCCCGATTAGTCCTTATCAG 3' (SEQ ID NO. 20)
HERC2P2 gene
A forward primer: 5 'GGGAAGACCCAGGTGGTAGCTT 3' (SEQ ID NO. 21)
Reverse primer: 5 'CCAAATACTGGCCAACAAAA 3' (SEQ ID NO. 22)
LUC7L3 gene
A forward primer: 5 'TGATGGAAGTGTGTTTATGAATTAT 3' (SEQ ID NO. 23)
Reverse primer: 5 'ATGGGCCGCTCAAACA 3' (SEQ ID NO. 24)
WSB1 gene
A forward primer: 5 'GGTCCCTAGCCCTGCAACATTT 3' (SEQ ID NO. 25)
Reverse primer: 5 'ATCGGCCAGCTCCTGAACTTC 3' (SEQ ID NO. 26)
BCLAF1 gene
A forward primer: 5 'CCTTCACCTATTGCTACACCACTA 3' (SEQ ID NO. 27)
Reverse primer: 5 'GAACCAGACCTTTCAG 3' (SEQ ID NO. 28)
FAM126B gene
A forward primer: 5'GTGGTGCCAAAAATCAATAGCTT 3' (SEQ ID NO. 29)
Reverse primer: 5 'CCCCAATGCGTTACTTGCT 3' (SEQ ID NO. 30)
The fluorescent quantitative PCR probe sequence is as follows:
DDIT4 gene
The probe sequence is as follows: 5 'CCTGGGCGTCTGTCCTCACCATGC 3' (SEQ ID NO. 31)
APP Gene
The probe sequence is as follows: 5'TCCTCGGCCTCGTCACGTGTTCA 3' (SEQ ID NO. 32)
FKBP1A gene
The probe sequence is as follows: 5 'TCCTCCCGGGGACAGAAACAAGCC 3' (SEQ ID NO. 33)
PBX2 gene
The probe sequence is as follows: 5'ATGCCAGACGAAAGCGCCGTAACTT 3' (SEQ ID NO. 34)
YWHAQ gene
The probe sequence is as follows: 5 'AGCAGAAGACCGACACCTACTCCGACAAG 3' (SEQ ID NO. 35)
HERC2P2 gene
The probe sequence is as follows: 5 'AGACACCCGGGAACCCGGAATCCATGCACG 3' (SEQ ID NO. 36)
LUC7L3 gene
The probe sequence is as follows: 5 'CAGCTGATCTACCATACCTACCACACACACGTTG 3' (SEQ ID NO. 37)
WSB1 gene
The probe sequence is as follows: 5 'AATCCGAAGAGTGGATGCCCACCAC 3' (SEQ ID NO. 38)
BCLAF1 gene
The probe sequence is as follows: 5 'AGTTCATCTTTGCTCTGATGCTCCCCATGC 3' (SEQ ID NO. 39)
FAM126B gene
The probe sequence is as follows: 5 'TCTAATCCGGACAGCCAGTGCTTCTC 3' (SEQ ID NO. 40)
TABLE 3 real-time fluorescent quantitative PCR reaction System
Reagent Concentration of Volume of
Breast cancer characteristic gene primer 800nM 2μL
Fluorescent probe for breast cancer characteristic gene 200nM 0.5μL
2X PCR MasterMix 2X 12.5μL
cDNA template 2.67ng/μL 7.5μL
TOTAL 10μL 25μL
5) And (3) diagnosis of the result of the sample to be detected: the relative mRNA content of 10 gene markers, namely DDIT4, APP, FKBP1A, PBX2, YWHAQ, HERC2P2, LUC7L3, WSB1, BCLAF1 and FAM126B in peripheral blood samples is detected by real-time fluorescent quantitative PCR and substituted into a logistic regression model:
Figure BDA0002150242250000091
calculating a decision score X value of the sample, and judging that the detection result with the decision score X value being more than or equal to 0 is positive, namely the breast cancer patient; the detection result with the X value of less than 0 is judged to be negative, namely normal.
2. Results
Collecting 107 breast cancer (breast loss) and 44 Normal Control (Normal Control) peripheral blood samples, detecting the relative expression quantity of 10 transcriptional gene markers of the breast cancer in the peripheral blood by using fluorescent quantitative RT-PCR (reverse transcription-polymerase chain reaction), calculating a decision score X value of each sample, and judging as a positive detection result, namely the breast cancer, when the decision score X value is more than or equal to 0; otherwise, the result is a negative detection result, namely normal. The detection result is compared with the pathological detection result, and the result shows that the sensitivity (TP, true positive rate) of the composition based on 10 blood cell transcription gene markers to the breast cancer detection reaches 100%, the specificity (TN, true negative rate) is 93%, the detection accuracy is 98%, and the specific detection result is shown in table 4 and figures 1-2.
TABLE 4 sensitivity, specificity and ROC AUC values for Breast cancer detection
Figure BDA0002150242250000101
The above-mentioned embodiments only express the implementation manner of the present invention, and the description thereof is specific and detailed, but not to be understood as the limitation of the patent scope of the present invention. It should be noted that various changes and modifications can be made by those skilled in the art without departing from the spirit of the invention, and these changes and modifications are all within the scope of the invention. Therefore, the protection scope of the present patent shall be subject to the appended claims.
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cttcgccctc gtccttgccc cgaactccca ccccagatcg gccgccgcgc tcagcctggg 300
ggtcggcgac ccgggaggag gggtttgacc gctccacgag cctggagagc tcggactgcg 360
agtccctgga cagcagcaac agtggcttcg ggccggagga agacacggct tacctggatg 420
gggtgtcgtt gcccgacttc gagctgctca gtgaccctga ggatgaacac ttgtgtgcca 480
acctgatgca gctgctgcag gagagcctgg cccaggcgcg gctgggctct cgacgccctg 540
cgcgcctgct gatgcctagc cagttggtaa gccaggtggg caaagaacta ctgcgcctgg 600
cctacagcga gccgtgcggc ctgcgggggg cgctgctgga cgtctgcgtg gagcagggca 660
agagctgcca cagcgtgggc cagctggcac tcgaccccag cctggtgccc accttccagc 720
tgaccctcgt gctgcgcctg gactcacgac tctggcccaa gatccagggg ctgtttagct 780
ccgccaactc tcccttcctc cctggcttca gccagtccct gacgctgagc actggcttcc 840
gagtcatcaa gaagaagctg tacagctcgg aacagctgct cattgaggag tgttgaactt 900
caacctgagg gggccgacag tgccctccaa gacagagacg actgaacttt tggggtggag 960
actagaggca ggagctgagg gactgattcc tgtggttgga aaactgaggc agccacctaa 1020
ggtggaggtg ggggaatagt gtttcccagg aagctcattg agttgtgtgc gggtggctgt 1080
gcattgggga cacatacccc tcagtactgt agcatgaaac aaaggcttag gggccaacaa 1140
ggcttccagc tggatgtgtg tgtagcatgt accttattat ttttgttact gacagttaac 1200
agtggtgtga catccagaga gcagctgggc tgctcccgcc ccagcccggc ccagggtgaa 1260
ggaagaggca cgtgctcctc agagcagccg gagggagggg ggaggtcgga ggtcgtggag 1320
gtggtttgtg tatcttactg gtctgaaggg accaagtgtg tttgttgttt gttttgtatc 1380
ttgtttttct gatcggagca tcactactga cctgttgtag gcagctatct tacagacgca 1440
tgaatgtaag agtaggaagg ggtgggtgtc agggatcact tgggatcttt gacacttgaa 1500
aaattacacc tggcagctgc gtttaagcct tcccccatcg tgtactgcag agttgagctg 1560
gcaggggagg ggctgagagg gtgggggctg gaacccctcc ccgggaggag tgccatctgg 1620
gtcttccatc tagaactgtt tacatgaaga taagatactc actgttcatg aatacacttg 1680
atgttcaagt attaagacct atgcaatatt ttttactttt ctaataaaca tgtttgttaa 1740
aaca 1744
<210> 2
<211> 3572
<212> DNA
<213> human (Homo sapiens)
<400> 2
aaatagcaca gccttgctgt gcgtggtaga agttgggtta gtgttgacat gctgttgact 60
caccctcccg aggatggaag ctctggcctg ggtcaagttg tggtcactgc agttaacagt 120
ttgttgatct cagggagtat tccacagttg ctgatgtaat tgacaatgat tggagccagc 180
tcttccccag attcaaatgg accaattaga ggacttgttg gttctgttta tcaactatgt 240
acccactgat ggtaatgctg gcctgctggc tgaaccccag attgccatgt tctgtggcag 300
actgaacatg cacatgaatg tccagaatgg gaagtgggat tcagatccat cagggaccaa 360
aacctgcatt gataccaagg aaggcatcct gcagtattgc caagaagtct accctgaact 420
gcagatcacc aatgtggtag aagccaacca accagtgacc atccagaact ggtgcaagcg 480
gggccgcaag cagtgcaaga cccatcccca ctttgtgatt ccctaccgct gcttagttgg 540
tgagtttgta agtgatgccc ttctcgttcc tgacaagtgc aaattcttac accaggagag 600
gatggatgtt tgcgaaactc atcttcactg gcacaccgtc gccaaagaga catgcagtga 660
gaagagtacc aacttgcatg actacggcat gttgctgccc tgcggaattg acaagttccg 720
aggggtagag tttgtgtgtt gcccactggc tgaagaaagt gacaatgtgg attctgctga 780
tgcggaggag gatgactcgg atgtctggtg gggcggagca gacacagact atgcagatgg 840
gagtgaagac aaagtagtag aagtagcaga ggaggaagaa gtggctgagg tggaagaaga 900
agaagccgat gatgacgagg acgatgagga tggtgatgag gtagaggaag aggctgagga 960
accctacgaa gaagccacag agagaaccac cagcattgcc accaccacca ccaccaccac 1020
agagtctgtg gaagaggtgg ttcgagaggt gtgctctgaa caagccgaga cggggccgtg 1080
ccgagcaatg atctcccgct ggtactttga tgtgactgaa gggaagtgtg ccccattctt 1140
ttacggcgga tgtggcggca accggaacaa ctttgacaca gaagagtact gcatggccgt 1200
gtgtggcagc gccattccta caacagcagc cagtacccct gatgccgttg acaagtatct 1260
cgagacacct ggggatgaga atgaacatgc ccatttccag aaagccaaag agaggcttga 1320
ggccaagcac cgagagagaa tgtcccaggt catgagagaa tgggaagagg cagaacgtca 1380
agcaaagaac ttgcctaaag ctgataagaa ggcagttatc cagcatttcc aggagaaagt 1440
ggaatctttg gaacaggaag cagccaacga gagacagcag ctggtggaga cacacatggc 1500
cagagtggaa gccatgctca atgaccgccg ccgcctggcc ctggagaact acatcaccgc 1560
tctgcaggct gttcctcctc ggcctcgtca cgtgttcaat atgctaaaga agtatgtccg 1620
cgcagaacag aaggacagac agcacaccct aaagcatttc gagcatgtgc gcatggtgga 1680
tcccaagaaa gccgctcaga tccggtccca ggttatgaca cacctccgtg tgatttatga 1740
gcgcatgaat cagtctctct ccctgctcta caacgtgcct gcagtggccg aggagattca 1800
ggatgaagtt gatgagctgc ttcagaaaga gcaaaactat tcagatgacg tcttggccaa 1860
catgattagt gaaccaagga tcagttacgg aaacgatgct ctcatgccat ctttgaccga 1920
aacgaaaacc accgtggagc tccttcccgt gaatggagag ttcagcctgg acgatctcca 1980
gccgtggcat tcttttgggg ctgactctgt gccagccaac acagaaaacg aagttgagcc 2040
tgttgatgcc cgccctgctg ccgaccgagg actgaccact cgaccaggtt ctgggttgac 2100
aaatatcaag acggaggaga tctctgaagt gaagatggat gcagaattcc gacatgactc 2160
aggatatgaa gttcatcatc aaaaattggt gttctttgca gaagatgtgg gttcaaacaa 2220
aggtgcaatc attggactca tggtgggcgg tgttgtcata gcgacagtga tcgtcatcac 2280
cttggtgatg ctgaagaaga aacagtacac atccattcat catggtgtgg tggaggttga 2340
cgccgctgtc accccagagg agcgccacct gtccaagatg cagcagaacg gctacgaaaa 2400
tccaacctac aagttctttg agcagatgca gaactagacc cccgccacag cagcctctga 2460
agttggacag caaaaccatt gcttcactac ccatcggtgt ccatttatag aataatgtgg 2520
gaagaaacaa acccgtttta tgatttactc attatcgcct tttgacagct gtgctgtaac 2580
acaagtagat gcctgaactt gaattaatcc acacatcagt aatgtattct atctctcttt 2640
acattttggt ctctatacta cattattaat gggttttgtg tactgtaaag aatttagctg 2700
tatcaaacta gtgcatgaat agattctctc ctgattattt atcacatagc cccttagcca 2760
gttgtatatt attcttgtgg tttgtgaccc aattaagtcc tactttacat atgctttaag 2820
aatcgatggg ggatgcttca tgtgaacgtg ggagttcagc tgcttctctt gcctaagtat 2880
tcctttcctg atcactatgc attttaaagt taaacatttt taagtatttc agatgcttta 2940
gagagatttt ttttccatga ctgcatttta ctgtacagat tgctgcttct gctatatttg 3000
tgatatagga attaagagga tacacacgtt tgtttcttcg tgcctgtttt atgtgcacac 3060
attaggcatt gagacttcaa gcttttcttt ttttgtccac gtatctttgg gtctttgata 3120
aagaaaagaa tccctgttca ttgtaagcac ttttacgggg cgggtgggga ggggtgctct 3180
gctggtcttc aattaccaag aattctccaa aacaattttc tgcaggatga ttgtacagaa 3240
tcattgctta tgacatgatc gctttctaca ctgtattaca taaataaatt aaataaaata 3300
accccgggca agacttttct ttgaaggatg actacagaca ttaaataatc gaagtaattt 3360
tgggtgggga gaagaggcag attcaatttt ctttaaccag tctgaagttt catttatgat 3420
acaaaagaag atgaaaatgg aagtggcaat ataaggggat gaggaaggca tgcctggaca 3480
aacccttctt ttaagatgtg tcttcaattt gtataaaatg gtgttttcat gtaaataaat 3540
acattcttgg aggagcaaaa aaaaaaaaaa aa 3572
<210> 3
<211> 1514
<212> DNA
<213> human (Homo sapiens)
<400> 3
gctgttggtc cacgccgccc gtcgcgccgc ccgcccgctc agcgtccgcc gccgccatgg 60
gagtgcaggt ggaaaccatc tccccaggag acgggcgcac cttccccaag cgcggccaga 120
cctgcgtggt gcactacacc gggatgcttg aagatggaaa gaaatttgat tcctcccggg 180
acagaaacaa gccctttaag tttatgctag gcaagcagga ggtgatccga ggctgggaag 240
aaggggttgc ccagatgagt gtgggtcaga gagccaaact gactatatct ccagattatg 300
cctatggtgc cactgggcac ccaggcatca tcccaccaca tgccactctc gtcttcgatg 360
tggagcttct aaaactggaa tgacaggaat ggcctcctcc cttagctccc tgttcttgga 420
tctgccatgg agggatctgg tgcctccaga catgtgcaca tgaatccata tggagctttt 480
cctgatgttc cactccactt tgtatagaca tctgccctga ctgaatgtgt tctgtcactc 540
agctttgctt ccgacacctc tgtttcctct tcccctttct cctcgtatgt gtgtttacct 600
aaactatatg ccataaacct caagttattc attttatttt gttttcattt tggggtgaag 660
attcagtttc agtcttttgg atataggttt ccaattaagt acatggtcaa gtattaacag 720
cacaagtggt aggttaacat tagaatagga attggtgttg gggggggggt ttgcaagaat 780
attttatttt aattttttgg atgaaatttt tatctattat atattaaaca ttcttgctgc 840
tgcgctgcaa agccatagca gatttgaggc gctgttgagg actgaattac tctccaagtt 900
gagagatgtc tttgggttaa attaaaagcc ctacctaaaa ctgaggtggg gatggggaga 960
gcctttgcct ccaccattcc cacccaccct ccccttaaac cctctgcctt tgaaagtaga 1020
tcatgttcac tgcaatgctg gacactacag gtatctgtcc ctgggccagc agggacctct 1080
gaagccttct ttgtggcctt tttttttttt catcctgtgg tttttctaat ggactttcag 1140
gaattttgta atctcataac tttccaagct ccaccacttc ctaaatctta agaactttaa 1200
ttgacagttt caattgaagg tgctgtttgt agacttaaca cccagtgaaa gcccagccat 1260
catgacaaat ccttgaatgt tctcttaaga aaatgatgct ggtcatcgca gcttcagcat 1320
ctcctgtttt ttgatgcttg gctccctctg ctgatctcag tttcctggct tttcctccct 1380
cagccccttc tcaccccttt gctgtcctgt gtagtgattt ggtgagaaat cgttgctgca 1440
cccttccccc agcaccattt atgagtctca agttttatta ttgcaataaa agtgctttat 1500
gccggctttt ctca 1514
<210> 4
<211> 3229
<212> DNA
<213> human (Homo sapiens)
<400> 4
ctcctccctc ctccctctct ctcacacaca cccccgcttg ggcctcctct ctctctccgg 60
ctccattttc tccgccgccg ggggccgggg tctcctgtgg ggggcccagc cggtatccca 120
ggtctccctt cagtgccggg gtgaaccccc gggggagccg ggagccgggg gcagacgggc 180
gggggttggg gcggagggag cagcggcccc agcgagtttg gggggagaag taaccaggcg 240
gggggagggg cggagcaggg agggggcctc agggcccccc cccagctatg gacgaacggc 300
tactggggcc gccccctcca ggcgggggcc gggggggcct gggattggtg agtggggagc 360
ctgggggccc tggcgagcct cccggtggcg gagaccccgg tgggggtagc gggggggtcc 420
cgggaggccg agggaagcaa gacatcgggg acattctgca gcagataatg accatcaccg 480
accagagcct ggacgaggcc caggccaaga aacacgccct aaactgccac cgaatgaagc 540
ctgctctctt tagcgtcctg tgtgaaatca aggagaaaac tggcctcagc attcggagct 600
cccaggagga ggagccggtg gacccacagc tgatgcgctt ggacaacatg cttctggcag 660
agggtgtggc tgggcccgag aaagggggcg gctcagcagc agcagctgca gccgctgcag 720
cctctggtgg tggtgtgtcc cctgacaact ccatcgaaca ctcggactat cgcagcaaac 780
ttgcccagat ccgtcacata taccactcgg agctggagaa gtatgagcag gcatgtaatg 840
agttcacgac ccatgtcatg aacctgctga gggagcagag ccgcaccagg cccgtggccc 900
ccaaagagat ggaacgcatg gtgagcatca tccatcgaaa gttcagcgcc atccagatgc 960
agctgaagca gagcacctgc gaggctgtga tgatcctgcg ctcccgtttc ctggatgcca 1020
gacgaaagcg ccgtaacttc agcaaacagg ccactgaggt cctaaatgag tatttctact 1080
cccacctgag taacccatat cctagtgagg aggccaagga ggagcttgcc aagaagtgtg 1140
gcatcaccgt gtctcaggtc tccaactggt ttggcaacaa gaggattcgc tataagaaaa 1200
acatcggaaa gttccaagag gaggcaaaca tctatgctgt caagaccgcc gtgtcagtca 1260
cccagggggg ccacagccgc accagctccc cgacaccccc ttcctctgca ggctctggcg 1320
gctctttcaa tctctcagga tctggagaca tgtttctggg gatgcctggg ctcaacggag 1380
attcctattc tgcttcccag gtggaatcac tccgacactc gatggggcca gggggctatg 1440
gggataacct cgggggaggc cagatgtaca gcccacggga aatgagggca aatggcagct 1500
ggcaagaggc tgtgaccccc tcttcagtga catccccaac ggagggacca gggagtgttc 1560
actctgatac ctccaactga tcttgcccct cagggtcaca ggggtggggg ctctcacaag 1620
gcgacttgaa gaggacgcag gcttccagag gacaaacccc aatacaggag aagcacaaga 1680
cagagaaggg ccaatggggt catcccctcc ctaacgagac tctctgtgct gggggtgcta 1740
attacatggc aggaagaatg gggcctctaa ggggagtgtg gggtctgtct ctcccttttt 1800
tccatctttt tcctctctcg ctttctttct tacacagaaa catacacata ccgagaaacc 1860
tatttctcag accccttttt ctcctctgtc tttctctctc cctctcccac acctcacaca 1920
cacatactcc cacttgcaac tattctgttt ctctcctggg ctcccccact ttcccttccc 1980
caccccactt gtatgctctg gaatctgtgg agacgccagc cctgcccaat cagagatgcc 2040
aaaaatgggg acatgacttc tggacagagg acatgggcca cgcccccatg catccccacc 2100
cccgcccctc cggacggctt acttacctca tacgcagctc atcttaaacc aatagaatcg 2160
ctcggtggac gagagtgtct gactcagata tctacctcgg agggagtttc tgctacttta 2220
gggaattatt gactgggctt tggggttgaa cttttttttt tttaaagaaa gaaaaagaaa 2280
ccctgggatc catctgtttt ttttgttgtt gttgttgttt ttgttgttgt tggtggtggt 2340
ggtggtggtg gttcttaatt tttaatttag tttggggaag tagcttgttt ttttttttat 2400
aaatatgttg atttcttgtc tttttttttt tttatttctt actttcccat attaggggtg 2460
atagccaaag gggttctggt aagagaaagg gggacaaaca gaactggtaa agaggccccc 2520
ctggctccag gcctgtccat caggaagtaa attttacagg gcaccaagct ttgcccccta 2580
aaatccctta ggtgttcttt gttcatgcag gcaggtttct gccgcatttg atgtggaggc 2640
agtgaagggc ttgccctgct ggcctctcat cccccttctt cccacaaccc ttgggcaggg 2700
ctggactcag taattttgag gaaattgaag atgccatctt cccctgtgag tgacatgtct 2760
ttaatttttt aaaaaactac tatttgaaaa ttggaggggg aagaatggga agggagttat 2820
tgccaaatat gttaaatatg ggttggggtg cttgtatatg tatcttcctc aatttcccca 2880
taaatgaggt atctttttgt cacaccaaaa tcaaggggta gggagaggga ggaggttgca 2940
aaaagccaga tgtgggggaa aagtaacatc aacactgtcc catcctcagc cctgaactag 3000
ctaccatctg atcccctcag acattctcag gattttacaa gactgtcaga gtggggaacc 3060
cctcccatta aagatccggg caggactggg gacaggttgg aagtgtgatg ggtggggggg 3120
tgggaggcat gggccggggg cagttctctc ctcacttgta aacttgtgta gtttcacaga 3180
aaaaaaacaa aatgcagttt taaataaaga aatttctttt ttccctggg 3229
<210> 5
<211> 2196
<212> DNA
<213> human (Homo sapiens)
<400> 5
aaagccaaaa gcagatcaaa gtggtgggac tcgcgtcgcg gccgcggaga cgtgaagctc 60
tcgaggctcc tcccgctgcg ggtcggcgct cgccctcgct ctcctcgccc tccgccccgg 120
ccccggcccc gcgcccgcca tggagaagac tgagctgatc cagaaggcca agctggccga 180
gcaggccgag cgctacgacg acatggccac ctgcatgaag gcagtgaccg agcagggcgc 240
cgagctgtcc aacgaggagc gcaacctgct ctccgtggcc tacaagaacg tggtcggggg 300
ccgcaggtcc gcctggaggg tcatctctag catcgagcag aagaccgaca cctccgacaa 360
gaagttgcag ctgattaagg actatcggga gaaagtggag tccgagctga gatccatctg 420
caccacggtg ctggaattgt tggataaata tttaatagcc aatgcaacta atccagagag 480
taaggtcttc tatctgaaaa tgaagggtga ttacttccgg taccttgctg aagttgcgtg 540
tggtgatgat cgaaaacaaa cgatagataa ttcccaagga gcttaccaag aggcatttga 600
tataagcaag aaagagatgc aacccacaca cccaatccgc ctggggcttg ctcttaactt 660
ttctgtattt tactatgaga ttcttaataa cccagagctt gcctgcacgc tggctaaaac 720
ggcttttgat gaggccattg ctgaacttga tacactgaat gaagactcat acaaagacag 780
caccctcatc atgcagttgc ttagagacaa cctaacactt tggacatcag acagtgcagg 840
agaagaatgt gatgcggcag aaggggctga aaactaaatc catacagggt gtcatccttc 900
tttccttcaa gaaacctttt tacacatctc cattccttat tccacttgga tttcctatag 960
caaagaaacc cattcatgtg tatggaatca actgtttata gtcttttcac actgcagctt 1020
tgggaaaact tcattccttg atttgtgttt gtcttggcct tcctggtgtg cagtactgct 1080
gtagaaaagt attaatagct tcatttcata taaacataag taactcccaa acacttatgt 1140
agaggactaa aaatgtatct ggtatttaag taatctgaac cagttctgca agtgactgtg 1200
ttttgtatta ctgtgaaaat aagaaaatgt agttaattac aatttaaaga gtattccaca 1260
taacttctta atttctacat tccctccctt actcttcggg ggtttccttt cagtaagcaa 1320
cttttccatg ctcttaatgt attccttttt agtaggaatc cggaagtatt agattgaatg 1380
gaaaagcact tgccatctct gtctaggggt cacaaattga aatggctcct gtatcacata 1440
cggaggtctt gtgtatctgt ggcaacaggg agtttcctta ttcactcttt atttgctgct 1500
gtttaagttg ccaacctccc ctcccaataa aaattcactt acacctcctg cctttgtagt 1560
tctggtattc actttactat gtgatagaag tagcatgttg ctgccagaat acaagcattg 1620
cttttggcaa attaaagtgc atgtcatttc ttaatacact agaaagggga aataaattaa 1680
agtacacaag tccaagtcta aaactttagt acttttccat gcagatttgt gcacatgtga 1740
gagggtgtcc agtttgtcta gtgattgtta tttagagagt tggaccacta ttgtgtgttg 1800
ctaatcattg actgtagtcc caaaaaagcc ttgtgaaaat gttatgccct atgtaacagc 1860
agagtaacat aaaataaaag tacattttat aaaccattta ctatggcttt gtaacaattg 1920
catacccata ttttaaggga caggtgaatt tactactttc taaagtttat tgatacttcc 1980
cttttatgta aaatgtagta gtgataccta tatttccaca ttgtgcattg tgacacactt 2040
gtctagggat gcctggaagt gtataaaatt ggactgcatt tcttagagtg ttttactata 2100
gatcagtctc atgggccatc tcttcctcag atgtaaatga tatctggtta agtgttatat 2160
ggaataaagt ggacatttta aaactagcaa agttaa 2196
<210> 6
<211> 6075
<212> DNA
<213> human (Homo sapiens)
<400> 6
tcggcccgcc cctcgggccg cgagaggcgc cgggatcgcg ggcgccggct gagccagcgg 60
ctcttgggag gctgcgtccg cgcgccggcg gggcgaggcg gccgggccct gcgcgtcagg 120
cctgagacct gggaggaagc tggagaaaag atgccctctg aatctttgtg tttggctgcc 180
caggctcgcc tcgactccaa atggttgaaa acagatatac agcttgcatt cacaagagat 240
gggctctgtg gtctgtggaa tgaaatggtt aaagatggag aaattgtata cactggaaca 300
gaatcaaccc agaacggata gctccctcct ggaaaagctt ttgtctggtc ctctgagccc 360
cagtgagagt ttcctgaggt acctcaccct tccacaagac aacaggcttg ccattgatct 420
gcaacaaacg gcggttgttg tcatggccca tttagaccgt ctggctacac cctgtagatg 480
cctcctctgt gtagctctcc gacgtctcat aagagtcatt ttttacaggt cagaactgta 540
gaaataatga gaaagtgaca tttgtacgca tagctgattt ggagaaccat aataacgatg 600
gaggcttctg gactgtgatt gacgggaaag tgtatgatat aaaggacttc cagacacagt 660
cgttaacaga aaatagtatt cttgctcagt ttgcagggga agacccagtg gtagctttgg 720
aagctgcttt gcagtttgaa gacacccggg aatccatgca cgcattttgt gttggccagt 780
atttggagcc tgaccaagaa ggcgtcacca taccagatct ggggagtctc tcctcacctc 840
tgatagacac agagaggaat ctgggcctgc ttctcggatt acacgcttcc tatttagcaa 900
tgagcacacc gctgtctcct gtcgagattg aatgtgccaa atggcttcag tcatccatct 960
tctctggagg cctgcagacc agccagatcc actacagcta caacgaggag aaagacgagg 1020
accactgcag ctccccaggg ggcacacctg ccagcaaatc tcgactctgc tcccacagac 1080
gggccctggg ggaccattcc caggcatttc tgcaagccat tgcagacaac aacattcagg 1140
atcacaacgt gaaggacttt ttgtgtcaaa tagaaaggta ctgtaggcag tgccatttga 1200
ccacaccgat catgtttccc cccgagcatc ccgtggaaga ggtcggtcgc ttgctgttat 1260
gttgcctctt aaaacatgaa gatttaggtc atgtggcatt atctttagtt catgcaggtg 1320
cacttgatat tgagcaagta aagcacagaa cgttgcctaa gtcagtggtg gatgtttgta 1380
gagttgtcta ccaagcaaaa tgttcgctca ttaagactca tcaagaacag ggccgttctt 1440
acaaggaggt ctgcgctcct gtcatcaaac gtttgagatt cctctttaat gaattgagac 1500
ctgctgtttg taatgacctc tctataatgt ctaagtttaa attgttaagt tctttgcccc 1560
attggaggag gatagctcag aagataattc gagaaccaag gaaaaagaga gttcctaaga 1620
agccagaatc tacggatgat gaagaaaaaa ttggaaacga agagagtgat ttagaagaag 1680
cttgcatttt gcctcatagt ccaataaatg tggacaagag acccattgca attaaatcac 1740
ccaaggacaa atggcagccg ctgttgagta ctgttacaga tgttcacaaa tacaagtggt 1800
tgaagcagaa tgtgcagggt ctttatccgc agtctccact cctcagtaca attgctgaat 1860
ttgcccttaa agaagagcca gtggatgtgg aaaagagaaa gtgcctacta aaacagttgg 1920
agagagcaga ggttcgcctg gaagggatag atacaatttt aaaattgtat ctggtgagca 1980
agaatttctt acttccatct gtgccgtatg cgatgttttg tggatggcaa agacttattc 2040
ctgagggaat cgatataggg gaacctctta ctgattgttt aaaggatgtt gatttgatcc 2100
cgccttttaa tcggatgctg ctggaagtca cctttggcaa gctgtacgct tgggctgttc 2160
agaacattcg aaatgttttg gtggatgcca gtgccaaatt taaagagctt ggtatccagc 2220
cggttcccct gcaaaccatc accaatgaga acccatcggg accgagcctg gggaccatcc 2280
cgcaagccca cttcctcctg gtgatgctca gcatgctcac cctgcagcac agcgcaaaca 2340
accttgacct cctgctcaat tccggcacgc tggccctcgc tcagacggca ctgcgcctga 2400
ttggccccag ttgtgacagc gttgaggaag atatgaatgc ttctgcccaa ggtgcttctg 2460
ccacagtttt ggaagaaaca aggaaggaaa cggctcctgt gcagctccct gtttcagggc 2520
cagaactggc tgccatgatg aagattggaa caagggtcat gagaggtgtg gactggaaat 2580
ggggcgatca ggatgggcct cctccaggcc taggccgagt gattggtgag ctgggagagg 2640
acgggtggat aagagtccag tgggacacag gcagcaccaa ctcctacagg atggggaaag 2700
aaggaaaata cgacctcaag ctggcagagc tgccagcccc tgcacagccc tcagcagagg 2760
attcggacac agaggacgac tctgaagccg aacaaactga aaggaacatt caccccactg 2820
caatgatgtt taccagcact attaacttac tgcagactct ttgtctgtct gctggagttc 2880
atgctgagat catgcagagt gaagccacca agactttatg cggactgctg cgaatgttag 2940
tggaaagcgg aacgacggac aagacatctt ctccaaacag gctggtgtac agggagcaac 3000
accggagctg gtgcacgctg gggtttgtgc agagcatcgc tctcacgctg caggtgtgcg 3060
gcgccctcag ctccccgcag tggatcacgc tgctcatgaa ggttgtggaa gggcacgcac 3120
ccttcactgc cacctcgctg cagaggcaga tcttagctgt gcatttgttg caagcagtcc 3180
ttccgtcatg ggacaagacc gaaagggtga gggacatgaa atgcctcatg gagaagctgt 3240
ttgacttctt ggggagcttg ctcactatgt gctcctctga cgtgccgtta ctcagagagt 3300
ccacgctgag gcggcgcagg gtgtgcccgc aggcctcgct gactgccacc cacagcagca 3360
cactggcgga ggaggtggtg gcactgctgc acacgctgca ctccctgact cggtggaatg 3420
ggctcatcaa caagtacatc aactcccagc tccgctccat cacccacagc tttgcgggaa 3480
ggccttccaa aggggcccag ttagatgact acttccctga ttccgagaac cctgaagtgg 3540
ggggcctcat ggcggtcctg gctgtggttg gaggcatcga tggtcgcctg tgcctgggcg 3600
gccaagttgt gcacgatgac tttggagaag tcaccatgac tcgcatcacc ctgaagggca 3660
aaatcaccgt gcagttctct gacatgcgga cgtgtcgcgt ttgcccattg aatcagctga 3720
aaccactccc tgccgtggcc tttaatgtga acaacctgcc cttcacagag cccatgctgt 3780
ctgtctgggc tcagttggtg aacctcgctg gaagcaagtt agaaaagcac aaaataaaga 3840
aatcgactaa acaggccttt gcaggacaag tggacctgga cctgctgcgg cgccagcagt 3900
tgaagctata catcctgaaa gcaggtcggg cgctgttctc ccaccaggat aaactgcggc 3960
agatcctgtc tcagccagct gttcaggaga ctggaactgt tcacacagaa cccatggata 4020
cggagggcta gctgtatatg tttattgctg tggaaacatg aaaacaatga tggagcagtg 4080
gtatcacctg accttgggga catgtctcct gaagggccgc agccccccat gatcctcttg 4140
cagcagctgc tggcctcggc cacccagccg tctcctgtga aggccatatt tgataaacag 4200
gaacttgaga ctgctgcact ggccgttgtg gagtccactc acccttcgag cccaggattt 4260
gaagactgca gctccagtga ggccaccacg cctgtcaacg tgcagcacat ccgccctgcc 4320
agagtgaaga ggcgcaagca gtcacccgtt cccgctctgc cgatcgtggt gcagctcatg 4380
gagatgggat ttcccagaag gaacatcgag tttgccctga agtctctcac tggtgcttcc 4440
gggaatgcgt ccggcttgcc tggtgtggaa gccttggtcg ggtggctgct ggaccactcc 4500
gacatacagg tcacggagct ctcagatgca gacacggtgt ccgacgagta ttctgacgag 4560
gaggtggtgg aggacatgga tgatgccgcc tactccatgt ctactggtgc tgttgtgacg 4620
gagagccaga cgtacaaaaa ccgagctggt ttcttgggta atgatgatta tgctgtatat 4680
gtgagagaga atattcaggt gggaatgatg gttagatgct gccgaacata cgaagaagtg 4740
tgcgaaggtg atgtgatgtt ggcaaagtca tcaagctgga cagagatgga ttgcatgatc 4800
tcaatgtgca gtgtgactgg cagcagaaag ggggcatcta ctggtttagg tacattcatg 4860
tggaacttat aggctatcct ccaccaagaa gttcttctca catcaagatt ggtgataaag 4920
tgcgggtcaa agcctctgtc accacaccaa aatacaaatg gggatctgtg actcatcaga 4980
gtgtgggggt tgtgaaaggt gtgatggatg tcagatgttt cctatcaatg gatccagatt 5040
caaatgcaga aactgtgatg actttgattt ttgtgaaacg tgtttcaaga ccaaaaaaca 5100
caataccagg catacatttg gcagaataaa tgaaccaggc ttcagcagaa gaaacacttc 5160
ctataaatct cgcccaaaca ggaaaggaga agcattaggg tgtccgacta cgtgggtttc 5220
atagctgtgg aaaagccaaa ggggagactc ctgaagaaag gcggtgaaga ctgtgaagag 5280
cgggtcagga agatgagcac agcactgcta ctcctgtggg cacagggaca gcatgtctcc 5340
agccagcgcc accttgttta atacatggga actcactgaa attcattctg tattttgccc 5400
gcaaagtttt aaagctttca tccacagtca ggaattaaac ttataccaat gagagcctca 5460
cacattcaag gatgtactaa gcactacagg cctcacagaa acagagatcc catcttggag 5520
ttttcagtac cacatgggag ataaagggtt ttgaacatga aatgacaaaa acaacagcaa 5580
gaagaaaatt cttgtccttt ttcattacta tcagactcaa ataaatgtct tggctcttac 5640
attacattca ttcttcaacc attgtggtct ggcttccact tccttcactt caccaacatg 5700
gctctgccaa aggaagcccg tgatctctag gccatcactt taattgatct ttctacaaca 5760
tttatcctgg ttgttaagcc ctccttacaa cattcttctc tctttgtttt tatagctcca 5820
tctctcctgc ttctttaact tgataatgca tacttgattt ttctatttgt tatttcataa 5880
accaattaat acacagataa aatgactgta tatcaaacca tgtttgtata gaaaaaatgg 5940
attttggatg cctctcatat gtaattagtt ctattaaaca tattaattgt attgtttaat 6000
ttgtcaggtt tttgacagaa ttttgtttac aagtaataaa aattttatct ccaattttca 6060
ataattacac ccatt 6075
<210> 7
<211> 6882
<212> DNA
<213> human (Homo sapiens)
<400> 7
gtcttgtcgg ctcctgtgtg taggagggat ttcggcctga gagcgggccg aggagattgg 60
cgacggtgtc gcccgtgttt tcgttggcgg gtgcctgggc tggtgggaac agccgcccga 120
aggaagcacc atgatttcgg ccgcgcagtt gttggatgag ttaatgggcc gggaccgaaa 180
cctagccccg gacgagaagc gcagcaacgt gcggtgggac cacgagagcg tttgtaaata 240
ttatctctgt ggtttttgtc ctgcggaatt gttcacaaat acacgttctg atcttggtcc 300
gtgtgaaaaa attcatgatg aaaatctacg aaaacagtat gagaagagct ctcgtttcat 360
gaaagttggc tatgagagag attttttgcg atacttacag agcttacttg cagaagtaga 420
acgtaggatc agacgaggcc atgctcgttt ggcattatct caaaaccagc agtcttctgg 480
ggccgctggc ccaacaggca aaaatgaaga aaaaattcag gttctaacag acaaaattga 540
tgtacttctg caacagattg aagaattagg gtctgaagga aaagtagaag aagcccaggg 600
gatgatgaaa ttagttgagc aattaaaaga agagagagaa ctgctaaggt ccacaacgtc 660
gacaattgaa agctttgctg cacaagaaaa acaaatggaa gtttgtgaag tatgtggagc 720
ctttttaata gtaggagatg cccagtcccg ggtagatgac catttgatgg gaaaacaaca 780
catgggctat gccaaaatta aagctactgt agaagaatta aaagaaaagt taaggaaaag 840
aaccgaagaa cctgatcgtg atgagcgtct aaaaaaggag aagcaagaaa gagaagaaag 900
agaaaaagaa cgggagagag aaagggaaga aagagaaagg aaaagacgaa gggaagagga 960
agaaagagaa aaagaaaggg ctcgtgacag agaaagaaga aagagaagtc gttcacgaag 1020
tagacactca agccgaacat cagacagaag atgcagcagg tctcgggacc acaaaaggtc 1080
acgaagtaga gaaagaaggc ggagcagaag tagagatcga cgaagaagca gaagccatga 1140
tcgatcagaa agaaaacaca gatctcgaag tcgggatcga agaagatcaa aaagccggga 1200
tcgaaagtca tataagcaca ggagcaaaag tcgggacaga gaacaagata gaaaatccaa 1260
ggagaaagaa aagaggggat ctgatgataa aaaaagtagt gtgaagtccg gtagtcgaga 1320
aaagcagagt gaagacacaa acactgaatc gaaggaaagt gatactaaga atgaggtcaa 1380
tgggaccagt gaagacatta aatctgaagt gcagcgtaag tatgcacaga tgaagatgga 1440
actaagccga gtaagaagac atacaaaagc ctcttctgaa ggaaaagaca gtgtagtcct 1500
gcaaaacatt ttgaggtaca ttgttttgtc tcagctattt tgtagcagac tcgtgccccc 1560
attagtgtgc ctctttggaa attatcgccc acatttgtaa tatagtcgcc attgaaaagt 1620
taattatcct ttttttaggg attttgatgt catttctttt ttttttttaa taaaaaggtt 1680
gaactgtttt tttttttctt tttggtatta agtccatctt gtgttggtac attggcagag 1740
acatatgctt taaaaactta aatatttcgg aggcacatgt tggactactt tgttttaatt 1800
aaactgctag tatttctttg tcaaggatgt ttctagtttt ttgctttatt gccttgcatt 1860
ctaatgcagt ttgttctgta actcgagagc cagtagcatt ggattgatgg aagtgtaggg 1920
tttatgaatt attgcagctg actaccatac ctcacacagc gttggtgttg tgagcggccc 1980
atgaaaagcc aaattaaaaa tcaaggattc agtcaaacta agcaggtact catgccaggt 2040
actcctttct ctacccacat ccatgtttga atgctattgc ctgtgatctt tacgcttaac 2100
tgttgtgtat cttttttgtt ctttacaaga agtgcagagg ggttttttgt gtattgcgtg 2160
aaaacttata aaacaaatgt taacagaatg gaattttttt tcaactgtat gtagggctgc 2220
agtggtggcc agaattagat atctttaaag aattttaaat acaataaaca cttcatatta 2280
ttcgccttgt tacactcaat gcaattctca agtctataag aggtatgtgc ttaatatttc 2340
ctactgtgta ggagaatttg cagtcagcca taggtatgta ggaatagtca ctcactggct 2400
gatacattta aagcagcagt gtgaatagca aggacagaca ccttcaattt gtgaaatcaa 2460
agaactgatg cactatatag aacgaatttg ggtttttaaa gaaatattaa aagttaggta 2520
ctgtaagtgt tcttaaaacc tgtaaacttc attctgtggg ctagtggtgt gggacaaaat 2580
attcctaatg aaaggaagta ccaattagtt gatttgttgg tggcattccc cttttgggaa 2640
agcaatgtaa ggttatgtct gtgtatgtca ttcacactta ggcaagcata cacaggcaca 2700
tggctttaag aaccacactg atgccttgat aattaaaaag aatacaagca ttccatgtac 2760
acatgttaat tagcagttag tgactgggcc aacactttct cataaaaatt ggccttttac 2820
atgttgtcta attatcattt ttccccaaat tttgcgttgt aggactactg ttcgaagatt 2880
tttggaagaa tactgagaac ggcataaagt gaagatcgac atttaaaaaa tgaggtgaaa 2940
gaaagctata gtggcataga aaaagtataa agctcagtta gtttttttat tattattatt 3000
attaaaagtt aattcaggac tgatgtgacc taccagattt cagaacatgt gttaatagta 3060
tatatgccac tgaaaactta ggtcctgtat catacttttt tctttaagac tttttaagaa 3120
atattactta aacatgtggc ttgctcagtg tttaattgca agttttcaat cttggacttt 3180
gaaaacagga ttaaacgtta gtattcgtgt gaatcagact aagtgggatt tcatttttac 3240
aactctgctc tacttagcct ttggatttag aagtaaaaat aaagtatctc tgactttctg 3300
ttacaaagtt gattgtctct gtcattgaaa agttttagta ttaatctttt tctaataaag 3360
ttattgactc tgaactagtc ccctgtttta aatacaagag ttacactatt actagaggtg 3420
ttggtgtaca gttttatctg atttgttctg tttaagacta atttttatag actttctaat 3480
gttttaaata atggtgcttc aattttaggt ggttatgaat aaatttgaat tttgctttta 3540
atagcaaaga tgtgcagtga actagaatat atttttacat ccctgagaga ttcatttagt 3600
agaaaattcc aagtatcctg acaagcactc tttagctggc tagctatggg atgatgtaga 3660
aaagcattca agagctagtt tttgttaagt cctgtatcaa gattaaccca gctgtgtcag 3720
tttataaatg tatttgtgta tagggtgtgt agtatatatg gcaagggttt tttcccccca 3780
cttaagtgat tatttttgtg tcacatctag gaaaaccggc agcatgtttc tatctatagc 3840
cagcttcttc gactgtataa aagtattctc tccagctacg tatatacaca catacatata 3900
tatcatagca attccttgtg gtttataact tgcaaatact gctatcagtt tataggtaaa 3960
gaaacagtgt gttaaatgac ttatccaggg agggtcctgt ggcttcatgt ttatggagtt 4020
gctaggtctc tgcctcatgg tccagtgcct gttaagccac tgtgttcatt ctaataggca 4080
taatgaattg ttaaagaatt tactaaaatc tcttccacca aactttgaaa aataatgaag 4140
ccgcccccac tttagaggct ctgtatgaaa aaatgctgtg gagacagagc cctcctggct 4200
ccctagctga tcctggagat gcagcaatag atgaatgggt tatctctgaa tttgtaagag 4260
ataattcaca tgaggattaa gataaaatgg gaagtaaaat ctaacaaaca caaagatagc 4320
tcccaggcac tgctttgtgt agtttgacag cattgtggtt gtagcagcaa aggacttaaa 4380
gtgatagttt ttaaaccata ttctgtccct aagtaataaa aaatctagga agttactaaa 4440
ataccagatt tgttctgctc tgcctcatct agaatcaacg tctaactaac ttaaatgaag 4500
tataataaat gagttcatat gaaaaggctt cctctatgga cacttagata tattgtaact 4560
attgaagtta cctgggatgt gggggtggtg ggaggaggac ctgcctcccc aggacatcta 4620
tgactaaggc ctggctttag ttatggagag agacgtagaa gttgaatttt acacccaaaa 4680
ttgatgtgac tgaagaggaa ctgattgttg ctaaccagct cacaagaatc cagtattgag 4740
accagttcac tagaagaaac aaacatttct gccatgcaga ccaaaaagtt attagttggt 4800
gaatatgtat tttctctttg gaaggtcttt aaggggagca aaccagtttt aatcaatcag 4860
attgcttggt aagtttggaa tctgcaatca gttggtctta aaaaaaaaaa aactttattt 4920
tggaaattta aagacataca caaaagagga acaatataat taacctctgt taactcatca 4980
ccaacaagac tcatgaccac ttttatactt catgagtgat tgtatttgta tccactgttt 5040
tctattattt tcgagcaagt ctcagacaca ccatttaatc tgtaaataat tcagcatgta 5100
tctctaaaag acaaagacct cttaaataac agttcattag tataaaacaa attgggtaaa 5160
cttttgttgg tcatcaaact atattagcac tggtccaata gtttaatttt cattgagcct 5220
ttcaagagga ccgaccagtc tgctgctcaa gacatcctct cctctggaat gtagagataa 5280
tacatatcat gctccttttt gttaaaacgt ttttttttcc ccttcaaaca cagtccattc 5340
atttttcagt ttgggttgaa acatcctttt cttgatcttg agcttataat aacctagtca 5400
tattgctcag ctcagatatt tttactccct ctccttaggc attctggttc cttaaatata 5460
gttagtgtca cagaggataa ataaccaacc ttatttctaa ggtctgagaa cacttggacc 5520
acatattggt tgagctcagc caccttctga ttaaagtttt cagacttgta agaactgaaa 5580
atttttatgg tggaagttct ctgagccctc atccattctg tttttaaaaa tgcattgcag 5640
atgggctatg tgaatatgtt tttaaacatc tgatatgtgc atgaaacaaa aaacacttga 5700
agttattatg tatacaattc tgtgggatgg gacttcatgc aggattggtt ttcaagtttg 5760
atttcctgag ggatttttta gttgtttgtg aaagaacccc aggtctactt ttgaaatttt 5820
gtattataat tgtaatgttg cccatggtta aaaaaaaaaa gtgttcagtg atctatgtct 5880
cctactactc ctatttctct gtttttcctc tgcaggagct tgctgctgtt aacagttatt 5940
cttccaagtt gttttctttg tggggagatg ggaggtggga ggaaatataa acatatatgt 6000
atagatcttt caaaatatat gacggtatac ccgtatgttc tgagtcttgc tgtttttacc 6060
tggtaatatt tagaaacatt tattttgaga taaaggagag cacttttaag ttgaacctgt 6120
agttttaaaa agtacatttc aagtaagcca aagcagagaa gtaaatgtat ttttcattgt 6180
tgtatcagaa ttttgaattt actattttaa aaattcaaga gttttgtagc tgatctattt 6240
cttcccctca gccatcccaa ataggtcatt tgtcaacaga tttaagaatg tttagaaaca 6300
acaactttgg gaaacgggaa acaatttggt ataagtgggt gtgccataac ctctctcgta 6360
gccattcatt cccggataca taccctagag aaactcttac acatgcgtac caggggatgg 6420
atttaagcat ttgtgtgtaa taggaagaaa agaagaaaaa acccgggaag atcccaagtg 6480
tccaccaaca gtgtgttgga taaatactgt ggtatattcc aacagtggaa ttccacagaa 6540
gtgaaactga actgcagctg tgtatgtgaa catggacaaa actcaacaat agaaggatca 6600
aaaaaagcaa gtcacagaag aatacatcac tatggttcca tttcaatgaa agtcaaaaac 6660
aggctgtcaa atacatgata aaaggaaacg attaagacaa aatttaatgt tagccgtttt 6720
gatggaggga gaggtgatca tgagggcaca ggggtcttca gaagaactgg tgagggtctg 6780
tttctgaagc ctgtgggcat ttcctttttt aatctgtatg tttatgtgct tttgtatgta 6840
tgatatttct taataaaatt taaaaagaag aatgggaaaa aa 6882
<210> 8
<211> 5105
<212> DNA
<213> human (Homo sapiens)
<400> 8
agtgtctcgt ttgcagtcgg cgctttaggg gaactgtctt cctccgcagg cgcgaggctg 60
ggtacagggt ctattgtctg tggttgactc cgtactttgg tctgaggcct tcgggagctt 120
tcccgaggca gttagcagaa gccgcagcgg ccgcccccgc ccgtctcctc tgtccctggg 180
cccgggaggg accaacttgg cgtcacgccc ctcagcggtc gccactctct tctctgttgt 240
tgggtccgca tcgtattccc ggaatcagac ggtgccccat agatggccag ctttcccccg 300
agggtcaacg agaaagagat cgtgagatta cgtactatag gtgaactttt agctcctgca 360
gctccttttg acaagaaatg tggtcgtgaa aattggactg ttgcttttgc tccagatggt 420
tcatactttg cttggtcaca aggacatcgc acagtaaagc ttgttccgtg gtcccagtgc 480
cttcagaact ttctcttgca tggcaccaag aatgttacca attcaagcag tttaagattg 540
ccaagacaaa atagtgatgg tggtcagaaa aataagcctc gtgaacatat tatagactgt 600
ggagatatag tctggagtct tgcttttggg tcatcagttc cagaaaaaca gagtcgctgt 660
gtaaatatag aatggcatcg cttcagattt ggacaagatc agctacttct tgctacaggg 720
ttgaacaatg ggcgtatcaa aatatgggat gtatatacag gaaaactcct ccttaacttg 780
gtagatcata ctgaagtggt cagagattta acttttgctc cagatggaag cttgatcctg 840
gtgtcagctt caagagacaa aactctcaga gtatgggacc tgaaagatga tggaaacatg 900
atgaaagtat tgagggggca tcagaattgg gtgtacagct gtgcattctc tcctgactct 960
tctatgctgt gttcagtcgg agccagtaaa gcagttttcc tttggaatat ggataaatac 1020
accatgatac ggaaactaga aggacatcac catgatgtgg tagcttgtga cttttctcct 1080
gatggagcat tactggctac tgcatcttat gatactcgag tatatatctg ggatccacat 1140
aatggagaca ttctgatgga atttgggcac ctgtttcccc cacctactcc aatatttgct 1200
ggaggagcaa atgaccggtg ggtacgatct gtatctttta gccatgatgg actgcatgtt 1260
gcaagccttg ctgatgataa aatggtgagg ttctggagaa ttgatgagga ttatccagtg 1320
caagttgcac ctttgagcaa tggtctttgc tgtgccttct ctactgatgg cagtgtttta 1380
gctgctggga cacatgacgg aagtgtgtat ttttgggcca ctccacggca ggtccctagc 1440
ctgcaacatt tatgtcgcat gtcaatccga agagtgatgc ccacccaaga agttcaggag 1500
ctgccgattc cttccaagct tttggagttt ctctcgtatc gtatttagaa gattctgcct 1560
tccctagtag tagggactga cagaatacac ttaacacaaa cctcaagctt tactgacttc 1620
aattatctgt ttttaaagac gtagaagatt tatttaattt gatatgttct tgtactgcat 1680
tttgatcagt tgagctttta aaatattatt tatagacaat agaagtattt ctgaacatat 1740
caaatataaa tttttttaaa gatctaactg tgaaaacata catacctgta catatttaga 1800
tataagctgc tatatgttga atggaccctt ttgcttttct gatttttagt tctgacatgt 1860
atatattgct tcagtagagc cacaatatgt atctttgctg taaagtgcaa ggaaatttta 1920
aattctggga cactgagtta gatggtaaat actgacttac gaaagttgaa ttgggtgagg 1980
cgggcaaatc acctgaggtc agcagtttga gactagcctg gcaaacatga tgaaaccctg 2040
tctctactaa aaatacaaaa aaaaaaaaaa ttagccaggc gtggtggtgc acacctgtag 2100
tcctagctac ttgggaggct gaggcaggag aattgcttga acccaggagg tggaggttgc 2160
agtaagccaa gatcacacca ctgcactcca acctggacaa cagagcgaga ctccatctca 2220
aaaaaaaaaa aaaattgtgt tgcctcatac gaaatgtatt tggttttgtt ggagagtgtc 2280
agactgatct ggaagtgaaa cacagtttat gtacagggaa aaggatttta ttatccttag 2340
gaatgtcatc caagacgtag agcttgaatg tgacgttatt taaaaacaac aacaaagaag 2400
gcagagccag gatataacta gaaaaaggat gtcttttttt ttttttttac tccccctcta 2460
aacactgctg ctgccttaat tttagaaagc agcttactag tttacccttg tggtataaag 2520
tattataaat tgttgtgaat ttgaagaatc cgtctactgt attattgcta aatattttgt 2580
ttatactaag ggacaattat tttaagacca tggatttaaa aaaaaaaaaa aaaactctgt 2640
ttctgcaggg gatgatattg gtgagttgcc aaagaagcaa tacagcatat ctgcttttgc 2700
cttctgttgt ttatcttacc tgcagatatt aagaatgtat gcattatgta aaatgctcaa 2760
ttatatattt ttgttgagtt ttttaattaa agacttgtaa aaaaaaaaaa cagtatattg 2820
caaatgtttc ttaaataggt taggtggagt actttctctc tgtctccatt gtaaggttga 2880
tggtacacca caggcaaatt aagcaaaaag gacaatgaag aaagaatgca ggactcaggc 2940
gctgctctag aattcattca gggctccccg agtgcagcag ctcttatggt ggttttgttt 3000
ttaggagaac tgttgtaata atgcatattt taaaagcata gggaagctct agaacacagg 3060
aaggtgacta ctaagcaaga gaaaagtatc ttttagtggg gaactaccag cctatagtaa 3120
gtctatctgg ttaaagtagt tattatgaaa atctagcagt ctgggtcctt tgagaaggca 3180
ttaaaaaagc aaaactctta tgagccatgt gtgattttga agactcattt ccactgagaa 3240
attatttgga agttcctatg gttagctctg ttaaggaatg taaaaattta tagggggtgt 3300
agggttatca atttgaaagc cagtagaaaa tctgctcaag ttacttcttg aggatcatct 3360
gtattttaca aaaagaagca caagaagcat ctaatcttta tacttcttgt gacttttttt 3420
cccctgcatt ttactttgta atatatcggc tttataattt taaaatacac tggccgggcg 3480
cagtggccca cacctataat cccagcactt tgggaggcca aggcaggtgg gtcacttaag 3540
gccgggagtt catgacaagc ctgaccaaca tagtgaaacc cctgtctcta ctaaaattac 3600
aaaaattagc tgggcatggt ggtgggttcc tgtactccta gctacttagg aggctgaggc 3660
aagagaattg cttgaactgg agaaatggag gttgcagtga gctgagatca cgcaactgca 3720
ctccagcctg ggtgacagag taagactcta aataaataag ataccattac ttttcatatc 3780
attgcattat ttttgctttc cacaccaaca tatccagtca agtaaaaaca gcttttttta 3840
ttttttattt tttatttttt ttgagacgga gtctcacact gtcacctggg ctggagtgca 3900
gtggtgcgat cttggctcac tgcagcctcc acctcctggg ttcaagcaat tctcctgcct 3960
cagcctccca agcagctggg attacaggcg ctcccccacc acgcccagct aatttttgtt 4020
gtatttttag gacagacggc gtttcactgt tggccagact ggtctcaaac tcctgacctc 4080
gtgatccgcc cgcctcggcc tcccagagtg ctgggattat aggtgtgagc caccgaacct 4140
ggcccaaaac agcatttttg gaagctacat tctgtgagat gttcacctgt ttgccacctc 4200
ttctcgtgaa aaccatagtg agtgccagtg tgaaaggaag attgcagcgt atatgtcaag 4260
tagaaacatg tttgaatttt ccatttgtct gtggggaaga aggtaataac agtaataaca 4320
gactgaagga ccaaaggaaa atagggaaga cgttgattat ggacttggat cagattctag 4380
ctacatgatt tgaaaatgac actgcctctc ctattttgcc acaagcctgt catttggaga 4440
actggcagat catttatgtt cagatttaat tttctgtttt agaatcccat ggagtacatg 4500
tgaacatagg aaaatcacac tcagcagcca agctatcctt ttgcgataat gaaatcactt 4560
taaaacctat aacttgatct taggttggca aatcttaaac ttaacgatcc ttgaaatttc 4620
ctgcctgctg tgactgtgat gcagttggat tcaactggtt tacactgctc ttgggtcggc 4680
aagaccaaaa aaggttggac tgcactgtag catgcttatg ggttgaggca gtggcagagg 4740
cagaggactt ggccgtcagc cagccagcac aggcgtaaga aaatagcatg agaagtttca 4800
cgagcctgaa accattgaga cagtgattac aacctccata ttaatcagat gagggtttgt 4860
aggtgacata gcattttacc caagtaattc tgaacagact gtggcttatg ataatacatt 4920
ttaactagca agtgtgtgga ctataaaaca aatatctaga gttatatatg gatgtactat 4980
catttggtga taaaagcata gaaaaagcat aagttggagt atactgggtt tttttgttgt 5040
tgttaaattc ttttccatca gaagtaagag ctgttggcag caactaataa aatgcaacct 5100
agtga 5105
<210> 9
<211> 6975
<212> DNA
<213> human (Homo sapiens)
<400> 9
agatcggaag tgacggagac gtgctagcgc gtcgaaggta gctctatggt tttcctcgcg 60
ttcttgagtc gggaaatggc cgctgtgtgg ttgcaacgga gataaattcc cggaaccgcg 120
attcggcgtg tcaggaattc gaatttagag tttaatttct cagagcattc tctccaggaa 180
gaatttttac agtatctcaa agacttcact tgacttcttg atcctgcata aaaccaagga 240
gaaaagaaat gggtcgctcc aattctagat cacattcttc aaggtcaaag tctagatcac 300
agtctagttc tcgatcaaga tcaagatctc attctagaaa gaagcgatac agttctaggt 360
ctcgttccag aacatattca aggtctcgta gtagagatcg tatgtattct agagattatc 420
gtcgcgatta cagaaataat agaggaatga gacgacctta tgggtacaga ggaaggggta 480
gagggtatta tcaaggagga ggaggtagat atcatcgagg tggttataga cctgtctgga 540
atagaaggca ctctaggagt cctagacgag gtcgttcacg ttccaggagt ccaaaaagaa 600
gatccgtttc ttctcaaaga tccagaagca gatctcgccg gtcatataga tcttctaggt 660
ctccaagatc atcctcttct cgttcttcat ccccatatag caaatctcct gtttctaaaa 720
gacgagggtc tcaggaaaaa caaaccaaaa aagctgaagg ggaaccccaa gaagagagtc 780
cgttgaaaag taaatcacag gaggaaccga aagatacatt tgaacatgac ccatctgagt 840
ctatcgatga atttaataag tcatcagcca catccggtga tatttggcct ggcctttcag 900
cttatgataa tagtcctaga tcaccccata gtccttcacc tattgctaca ccacctagtc 960
agagttcatc ttgctctgat gctcccatgc tcagtacagt tcactctgca aaaaatactc 1020
cttctcagca ttcacattcc attcagcata gtcctgaaag gtctgggtct ggttctgttg 1080
gaaatggatc tagtcgatac agtccttctc agaatagtcc aattcatcac atcccttcac 1140
gaagaagtcc tgcaaagaca atcgcaccac agaatgctcc aagagatgag tctaggggcc 1200
gttcctcgtt ttatcctgat ggtggagatc aggaaactgc aaagactggg aagttcttaa 1260
aaagtccccc tctacacaag aatctggatg cacgagaaaa gtctaccttc agagaggaaa 1320
gcccacttag gatcaaaatg atagcgagtg attctcaccg tcctgaagtc aaactcaaaa 1380
tggcacctgt tcctcttgat gattctaaca gacctgcttc cttgactaaa gacaggctgc 1440
ttgctagtac acttgtccat tctgtcaaga aggagcaaga attccgatcc atctttgacc 1500
acattaagtt gccacaggcc agcaaaagca cttcagagtc atttattcaa cacattgtgt 1560
ccttggttca tcatgttaaa gagcaatact tcaagtcagc tgcaatgacc ctaaacgagc 1620
ggttcacttc gtatcagaaa gccactgaag aacatagtac tcggcaaaag agccctgaaa 1680
tacacaggag aattgacatc tcaccaagta ccctgaggaa gcatacccgt ttagcagggg 1740
aagagagagt ttttaaagaa gaaaatcaaa agggagataa aaaattaagg tgtgactctg 1800
ctgaccttcg gcatgacatt gatcgccgta gaaaagaaag aagtaaagaa cggggagatt 1860
ccaagggctc cagggaatcc agtggatcaa gaaagcagga aaaaactcca aaagattaca 1920
aggaatacaa atcttacaaa gatgacagta aacataaaag agagcaagat cattctcgat 1980
cttcatcctc ttcagcatca ccttcttctc ccagttctcg agaagaaaag gagagtaaga 2040
aggaaagaga agaagaattt aaaactcacc atgaaatgaa agaatactca ggctttgcag 2100
gagttagccg accacgagga accttttttc gaattagagg cagaggaaga gccagaggag 2160
tttttgctgg gacaaatact ggtccaaaca actcaaatac tacttttcaa aagagaccga 2220
aggaagagga atgggatcca gaatataccc caaagagcaa gaagtacttc ttgcatgacg 2280
acagagatga tggtgtggat tattgggcca aaagaggaag aggtcgtggt acttttcaac 2340
gtggcagagg gcgctttaac ttcaaaaaat caggtagcag tcctaaatgg actcatgaca 2400
aataccaagg ggatgggatt gttgaagatg aagaagagac catggaaaat aatgaagaaa 2460
agaaggacag acgcaaggaa gaaaaggaat aataaatatg aagtaagatt acaacagagc 2520
agaacttgca cccaccattt tttttacctg atttttgttt tcaaataaga atgtaagcat 2580
tttacttaaa ttttactgtt tgcaagtagt ctatagaaat tttgttttaa gtcttcaaat 2640
atcttgagaa atagtagact gtatgttgaa aattgtactg aaataaagta gaaaattgtt 2700
acgtaccata tttgtaacta tcaactttta aaacttttaa cgtttttgtt acatgcattg 2760
taattctgct ttgtctataa gatatggtca agtacagctc tgtgaaagtt ctgattctct 2820
tccttccctg tttgtcaatg ttttattctg aagtaaacgt tagctctaca tataaatcct 2880
ggaacagaaa ttgtttatag agactacact aattatttta actgtataca tctgtttaat 2940
ttgaacacac tacatcgtag ggtgactgat ttttgaagta taccacagac aaaaagttgt 3000
tactatggta aactaagcta gtttaacact tgagcaaatg cttaagaagg aattaaaaaa 3060
aaaaagcttt gccaatagct aaaaagtaca agctattaaa aatcagattg aaaagttttg 3120
agaaaatgtt atttttactg aaagcaagca gtggcctata aagaacattc ttaggagcct 3180
tttctatttg cgttcaaaac tgtgtgttct ctttctattc ctatttgata gtttgagtca 3240
tggtcttaga tattagctat ttgtgagagg aaactggttt gtaacaatac tgcaaataga 3300
aaccccattt ctactgaaca tcctagtttt aaacagaaga aaaactgtaa tcctggggtt 3360
ggtatgtagg aggtctatcc tgcagaataa gttgatacat tagtacctga tttcatatct 3420
tacatattta tttgagctga acattagttt gtagtgtaac tattagtaaa aatagagaaa 3480
cacagcatac tgttcattaa tagtatttta aaaaaattgt ttttcaaatg tcaccaataa 3540
aagttttggc aggaagcttg ttgcggcatt gatctaacct ttttcccccc catttcagtt 3600
gcagtttttg tagaatggct ttttcttttt cctcttaaga gttctattct tcaggtagat 3660
aatttttcaa atgtgaatta tcttttgtgt ctatattgat agctcttaaa ggagtgaaaa 3720
tctaaaatag taaatttcaa tgttaagtgt ctgctttatg ggcatatata aaagtagaca 3780
catttcattt gttaatttag ttgtgtgtgt gtgttaaaag gagctaatgc ttattctgtt 3840
aatgtaaact tttgaagatc ttaagtgtat tgctctttca tcttaaacac tttcgaggat 3900
ttgcagtgcg tctagcacct agattacagc caggaacatt ggttaagaac tgttggaaac 3960
aaaactaaaa gcaaactcaa catatgtgat gtttatggcc ctcagatcct tagtattgtg 4020
tgattttccc ccgttaacat gtctttctaa aattgtctat taaagcagag gaaatacctg 4080
ccaaaggaag tatgtattgc attaatcagg gcataactaa tattctcctg ttcagaataa 4140
tacttattta cgtgtgaaag caacatggat gtgattccca acacagaatt ttcatgaccc 4200
ttttattgta tacaaataaa taccataaca gttacttggt tagacatcaa atctgtgtgc 4260
atgactatgt gcttatccac ttaagacaat aggtaaaagg ggatctgaga aattatgtaa 4320
tagggagtgg gaataaaact acttaattcc tgtgggcagg ttatatttta agttcaaatg 4380
cattgcttta acctttggtt acttttattc tgttaaacag aattgaagaa agagtattat 4440
accagagtgt agtaggctag ggtgattgta agaactctgt aatagaatgt cattgtggat 4500
gttacctttt tcagatccaa gcatataaaa agcctgtata ttttttaaaa acacatctta 4560
actccacgct ttacgatatt ataaaagttg aatggttcct cttggtaagg atatttgctt 4620
acaagtgcta ggaaataact cactgatacc tgcgttaaca tactttgttt tgcctagaga 4680
ggggcaataa aaatgaacca aaggatattt ccagaaagga ttaagaaagc tgtttaagaa 4740
ggccatgact ctttaggtgt gtatgtgtac ctttcagcat cctaggaatt tttatactaa 4800
aagcaaaatg ttttttccag ttagtcttct tcaaggaatt actattgttc cttttgtcac 4860
aggtaaaatc agtgttggga attataattt gagaaaaata ttacccagta acattgaatg 4920
tagatggcta aacgattctt actcagtgtg atgtataatg atgcaacagg gacccttgta 4980
aattgtcata cgccaataaa atgtcacaag taataactgc tgttgtttgt ttacctgtgt 5040
ctatttcaca catcttattt ctgtggccta ttttagaata tcagcgcatc tgttaggaag 5100
attactggtg tggtaaggct tgataaatgc tttataaact ccctcaaacc tttctttact 5160
gtttttttgt tttgtcttgt ttttgttttt gtttttgttt ttgtttttgt ttttgttttt 5220
cccttgtctc ccctgggaaa atgggaaatt ttacagttgg taaatctaag ccaaaattat 5280
tttgaaataa aggaattctg gatgtccagt ttagtcctcg ttttcttacg ttaatctggg 5340
accttatcac ccataatatg gtgattactt ctctttctaa aaacatagta gctagtaaat 5400
aagtaaaaag aattgtcttt tcattcactt taagtaagat gtggtataat tcttaccatg 5460
tgccatcctg tcagttttaa caaagcattt tcacagaaat ttgtgtacta agacaaactg 5520
acacattttg actcatacaa atggcaaatt agtccttaaa aattctgtga gagaaataac 5580
tctgtgtgta catacatatg catgtaaagt gttgtgtaag atcattggta gcttaattat 5640
actggataat tgtaatgtta tatacaaatt tcttatataa aagtatgctg cattattaac 5700
atttgtttaa cttttcttat ttttcttttt ctgggtttca actggaatcc cattggtggg 5760
gatgtacctt aagtttcctt gtggaataat agactttcac atccagaaag agaagttcag 5820
aggcctttct caatttacag agttgaagag gaaaggcaaa tggaggaata aacttcattg 5880
tcattgggat taatttggct agactcaatc tcttgagcct taaaatgaga aagtaatatc 5940
cattacatgt ttagagttct caaatagttg atactattat taaatgtttc aaattttatt 6000
ggggtagata ctaaaaatta gtacactgtc ctaatgaagt ttaaatgaac aagttttaca 6060
tttcttagga ttcaggaata tatggaatct agttgtattt aattgacttg agagccacag 6120
agattgtgtt gatttatgag ctggactcct attgttttag aaacatgcag taatgattaa 6180
cttgtgtcaa tgatggtaat gagaccaaac ttgtacattt aattaagggt accagttctt 6240
tttatgttac tagactatac cttggccttt aaaaatgaat ctcactgatt aaagagaaca 6300
ggcattatta ggatagcatt ccaccacaac tagaaacatt caaataatgt gtcttaattg 6360
taatctgtat ataggaaaat ttttcctatg gatatttttg gtgttttacc acagtgaact 6420
gatttgtagc acttatgaag tgcagaaggt aatattcttg aaaatagaaa aaggttgggt 6480
gagcaggctt taatgccttt cccccaagaa tatacatcga atttttctta atcttttggg 6540
gttggccagc ttccagattt cattaataat gagctctgcc tttaataaaa gtacatgatc 6600
atagctacac tgtatgttta ggtggtgtga aatgatttat aatcacagct tgaactgtgt 6660
ttgcttggta ctgtcatagt gattacaaat ttcatggaat gcgaagagca acaataaata 6720
aaaaatacca ctcaccctcc agaatagtgg attatttgct accttgagtc cttcactatg 6780
gaaaataatt tttcagtctc atttgtacta gaagggaaaa ctaaactttc tgttgagttc 6840
tcaggatact tgtaaggtgg ccgtgaaaaa gaatgttaaa tgcactttga attatttatt 6900
tatttattta tttatttatt tatttattta ttgagatgga gtcttaccca gactagagtg 6960
cagtggctcg agctc 6975
<210> 10
<211> 9335
<212> DNA
<213> human (Homo sapiens)
<400> 10
gcagttggca ggctgctgcg ggaggcggcg gcggtaggaa gccggagaca gcagggtgac 60
agaattggaa aatatttaac tcttaacaaa tgaattcccc acttgaactc tgccgaattc 120
ctgtgccacc tcctccttta gaaaactgat cttaatacag agataaaaga ggagtagaag 180
gtaaaagaaa atgctgggaa ctgaccgttg tgttgtggaa gaatggttat cagaattcaa 240
ggcattacct gacactcaga tcaccagtta tgcagcaact ttacaccgga aaaaaacact 300
tgtaccagcc ctctataaag ttattcaaga ttcaaataat gagctcctgg agcctgtctg 360
ccatcagctg tttgagctct atcgtagctc agaggttcga cttaagaggt tcacactgca 420
gttcttgcca gaattgatgt gggtttattt acggcttaca gttagccgag acagacagag 480
taatggttgc attgaagcac ttctgttagg aatttacaat ttggaaatcg ctgataaaga 540
tgggaacaat aaagttctgt ctttcactat cccctcctta tccaagcctt caatatacca 600
tgaaccttca acaattggat ccatggcttt gacagaaggg gcattgtgtc agcatgatct 660
catcagagtt gtttatagtg atcttcatcc tcagagggaa acattcactg cacagaaccg 720
gtttgaagtc ctgagttttc tcatgctgtg ttataattct gctattgtat atatgcctgc 780
ctcatcttac caatctcttt gtcggatggg ttccagggtt tgtgtgagtg gctttccacg 840
gcaacatgaa aaacactgga aagaactctg tggtcgaata gtattggatc ctgaatttat 900
ggtgcaactt ctcacagggg tttattatgc catgtataat ggacagtggg accttggcca 960
ggaagttctt gatgatatca tttatagagc ccagctagag cttttttctc aaccactatt 1020
ggttgccaat gccatgaaaa actcattacc atttgatgct cctgattcta cacaagaagg 1080
ccagaaagtc cttaaagttg aagtcactcc aacagtgccg aggatttctc ggactgcaat 1140
tacaacagct tcaatccgtc gtcatagatg gagaagagaa ggtgctgagg gtgtaaatgg 1200
aggagaggag tctgtaaacc tgaatgatgc agatgaagga ttttcatcag gggcttccct 1260
cagcagtcag ccaattggga ccaaaccatc ctcctcttct cagaggggaa gcttaaggaa 1320
agtagcaact gggcgttcag ccaaggataa agaaacagcc tctgccatca aatccagtga 1380
gagccctcga gattcagtag ttcgcaagca gtatgtacag caaccaactg atcttagtgt 1440
agattcagtt gagctgacac caatgaagaa acacctgagc ctgcctgctg gccaggtggt 1500
gccaaaaatc aatagcttaa gtctaatccg gacagccagt gcttcctcaa gtaaatcatt 1560
tgactatgta aatggcagtc aagcaagtac cagcattggg gttggcactg agggaggtac 1620
taatttagca gccaacaatg ctaatcgata ctcaactgtc agtctgcagg aagaccggct 1680
aggtcaagct ggcgaaggta aagagctcct cagcccagga gcccccttga ccaagcagtc 1740
tcgatcccca agtttcaata tgcagctaat atcccaggtg tagttttgac atcctccctc 1800
atctttctgc ttacctttta aactgaacat ttcattgtgc aagaagacac ttcatcccac 1860
attgtgaaaa tattggtcac tgttatcaga tttcatttag tttaggtatc ttcatactgt 1920
attttgtatc aaaacagcaa taaggttttc tttatccctc tttcctacat cttctcttca 1980
cctatccctt gtaaatgtgt ttgtgaagca gtataaaatg gttgcctttt ccatgccttc 2040
ctttctcctt gggtgatgtg caatccatcg taggctgatc ggtcccattt caacactgtg 2100
agactgaggg tacattagag gaaatggtgt atatgatccc tatgaaacga ttctttggct 2160
tttgtttaaa aacaaaacgg gtttgttctc ataatctata gaactatgaa gattactgga 2220
tcatattttt ttctcttaac caggagtgcc tcagagattc tgctatgact ttggacttct 2280
ctgagtctgt gcaatcattt tctggagaag catggggaaa ggtggtagac tgctgcactt 2340
tttcattaaa atgagggtag ctctttctcc acccccccat ctcctttatc ccgaagacat 2400
aaatgttcaa ttacggaggc atttaaatca agttgtgacc acctccattg gagggcagga 2460
ctcttgattg tgtaattgat aatgcacttt ctcaatggct gtatagtcat tattaacgtg 2520
tcttccctct tccccacaag gacatataag gtcatttctg tccttcaagt ttggccaact 2580
aacaaatcag aatctgaggg gcatgttcta tttcccagga atgattgaca ctttggtgct 2640
ggggttttgt gggggcgggg ggtagttttt gtttagcttt tgtggagatt gtgtgtgtga 2700
gaggagattt gatttttttt tcttcttttc ctttgtgagc tgatggctga agtgtaacag 2760
tacatcttca ggtaaagaga gggatttctc aatctacttt ctgttatgtc agactataag 2820
agaaaccctt tcagctgctt tctagatgta cctaaattca gtcagacatt ttggattaag 2880
aaacctaaag tcctgataca ttacatactc caaggaaata tatcagggac agacaattgg 2940
ctgaaacact gatacttcaa tgtgacacat ttttatagaa catttctacc agggggtact 3000
gaccttgatt tctcctacaa ggaccacact gcctttgtgt ttaatgtaat gcaatttgtg 3060
taccttctaa tcatatatct gcagttcctc atttttataa aactttgata tcatgccagt 3120
aagctagatg ttgaatgtat gtaagtagca tttggtaact gctaagaggt tacaaaaaca 3180
ttattggtaa aaaaaatttc cttagttctg atctggttgg ataagatttt atcataactt 3240
ttctgggtct caggctctga tgtttgaaaa agaagggaat atattgggtt ttaaaaaagt 3300
gtattgtgac ttaaactgtt ataagttatc cttccacaga atacatcaga gctatcagtg 3360
ctttgtacat ttagatgttt ttacttgatt attgtttaag aaaaatatac tgaatttata 3420
gaaagcaagt attctcctaa ttagcaaaag ttaaaatttt atctctacca ttaaaattac 3480
aatagatttt gataaataac cagaaaaaac gccttttttt ttttcacacc tagcaatcct 3540
cccgttttta ttgtaaggac tttctttttt ccctaagaga ctttctgtta gactctttat 3600
atatgagatg cttgtttaaa tatggtggtc tgtaacattt ttccagctca tgtgaaaatg 3660
gaaaactaga acctgaacta gtatctacaa cattgccaaa gtccagggta aagctaaaag 3720
ttgataagta gacaatttat tgttttgtgt gtgtctgtgt gtgtgtgtgt gtgtgtgtgt 3780
gtgtgtgtat ggtgtgtata tgtatatatc acaaagttgt attttaaata ttttaaatac 3840
cctttctttt aatttaaggg atgtcaaata aatgaaagga gtttaaaaat agccaaaata 3900
aatgagctat aaaggcccat aacatactaa aacaggcagt ttcaggtatg taaggaaagg 3960
aacattatac ttacctagaa agtgagatct aaaaaaaaat taaaaataaa taaaaaataa 4020
aaaagaaagt gagatcttgg ctatggctgg aggtcagtca ctttatggca taaattattt 4080
gggaggtaaa aagactgttt tcaattcaaa ttgtgcattt attggcatct aaatctagca 4140
tgattttggt tagagcacaa aagaaatacc acataatacc aaatcacagc aaatgttaga 4200
attaatacaa caaaattttc ctttggctag aaatcttatg ttatacctga aaaattggtt 4260
ttaaaaaatg ttcatcttgg ccgggcacgg tggctcacgc ctgtaatccc aacactctgg 4320
gaggctgagg tgggtgaatc atgaggtcag gagttcgaga ccagcctggc caacatggtg 4380
aaaccctgtc tctactaaaa atacaaaaaa ttagctgggc gtggtggcag gcgcctgtaa 4440
tcccagctac tcgggaggct gaggcaggag aatctcttga acctgggagg tggaggttgc 4500
agtgagccaa gaatgcacta ctgtactcca gcctaggcaa cagtgcaaga ctccatctct 4560
gaaaaaaaaa aaaaaaaaaa aaaaaaaagt tcatcttaga ggattttatt tatctgtatg 4620
tatatacata tatgtttgta tgtatacata cccacattaa cattttatga ccctgtaaca 4680
tttgttttct attcttttag gtgatgtgaa ttgacctcag tgaagaaaca tttcatttag 4740
tctaagcctt gcattcaggg tcttacaaca gatttcttgt gcaagaatta ttattagtta 4800
aaatggaagg tgttagttta acaaactgag agtcaaattt tctaagtttt taaatatgca 4860
ttttaacatg cattattttt ggcatttaat ttaaaatagt tttgtttcat gtatacaaca 4920
gctgttacag atatatgcca gcaatattca tactttttta acaagctttt gttatatatt 4980
ttctaatctc cataaaagtc taatcatcta tgaaaaagat atttagggag aaaatacttg 5040
ttttctgtaa taaaacaatt aggttggtgc catgtatgcc aagttggata aaagaataca 5100
aagaaacagc tgaaggtttt gggagctcgc tctgacatta attactagaa agcaaactaa 5160
aatgcaaagt gaatagttaa ctcagaagat ttgaattttt tgaaataggg tctcactctg 5220
tcctctaggc tagagtgcag tggcactatc acggctcact gcagcctcaa cctccctggg 5280
ctcaggtgat cttcccacct cagcctctgg agtagctgga actccaggca tgcaccacca 5340
cacctggcta atttttgtat ttttagtaga gacgaggttt tgccatgttg cccaggctgg 5400
tctcgaactc ctgggcttaa gagatccacc cacctggcct cccagaagtg ctaggattac 5460
agacataact accacacctg gcctgaagat ttttaaatgt gaaaatattt taagaagcta 5520
aggggaaaat cgttatttta aaatcctgat ccccttaact ttacccctta ccattcccct 5580
tacctttcca attcactttt gtctatttat tatagaatca gaattgtgct aagaagaaac 5640
cctggagata atctagctag tctcccactc cctcacccca accttcatcc tcaagaaaca 5700
gaggctcaga ggttgtggtg tgatcaagat catataccta aagcagagcc agaatcaaac 5760
ccagtctccc atgggtttgg ggaggcagtg ggttgttaac tccatttttg cagtttcttt 5820
atagttctgg tctagtagtt ggtgaataca acacattaag aaaagtgtta aatccagaaa 5880
aaatgtagag taatctagat ggggaaatgt tggaaatgtt aagtatatct acagatgtaa 5940
ggatcaatac attattctaa tttatgcctt actattttct gccacataac agttgtatgc 6000
tgccatttta tagttgaata catttgttgg gatttattta aatataaaat aaaccctgtg 6060
aaatggcttt gatcagtgtt ttctagttat tttaaagtaa tttttgagtc agccagcttt 6120
cagtcaccag tgtggcaagc taattatatt gcacaataga gtattgcaaa gtaaagatta 6180
aataaatttg attccattac tttttaatgt agaaagagac tgaatcttat gcttagagca 6240
aatgcaagca atatttcctt atatgattga aaaaggttct atagtgtgaa gcttatgatt 6300
ccataatgga acagtgacca tgatgtcatt taaagtgtgt atataccata taaaatgtct 6360
taaatgcggt agtctcagct atataagctc agtatttcca gtctgtattc tcagattcca 6420
tctagtagct ttaaattaat taaaattgtt tattagacac tggaatactg agaataactt 6480
ctttcagatt gttttgtttg caccactttt gtgaatattt taatgaagtg gagtccattt 6540
ttgagtactt cagttgttga caatcagttg tctcgtttaa atctctgcat gttcatttgt 6600
aaataaaaaa tgtagtacct gtctttaggg gtagtcccct atttattaca aacactggca 6660
aggaatatct gtccatttct gaccttggat tacaaagtat gttttgggtt tttccttttt 6720
taatcagtat ttcagttaca tctttgtttt cagctttaaa aagtttaacg ggtcatgcca 6780
atgatcagaa aatctgtaag aattttagag caatttttct atgtacagct atgttaaaca 6840
gtctgaacat gagacttttt ctttcaagtt gaagattatt gtcatcgttt taccactaag 6900
ttggttgaga cacttacttg taatacttta atttttttaa agtgttttta gaaacaagtt 6960
gtttgaaaac caattagaaa ttagaatatt tgccagatta taagcagatg gaatgcagtg 7020
taaaactgtt aacaatgcta ataaaattat gagtcatcag attggtacag ttttccctgc 7080
caagatggtc atattgataa tgtaagacaa attttagtat tacttgcatt atgtgtacct 7140
aataggtata tcatactggt actgagcata tatagaaaat actattcata gaggagtcat 7200
caccacccaa cctccttgcc tgtgtaggca tatttcttct gaacctgacc acacaagtac 7260
aacattttgg taacttcagt cttttcagta tttttgtaat cttagccata gtcctatgag 7320
aaatgtacat aagagcaaac aattcaggat agaaattagc agaaagctgg gaatgatgtg 7380
aaataactgg cagcatagta cagaaatgta aggtatatgt tttgcttctg gatttttaga 7440
aattgtgcta atcatgttta caaattaagg catattcaga tgtctgctat tatgtttaat 7500
attgatttga taaaaaaatg gaattaggtg tagcttagag tataaatgag tctttttaaa 7560
aatgtgtatc tggaagtagg gctaataaag aaatcctttt attttcaaag aaatgaactt 7620
aattggacaa ctcatcccca attacagaat tgatatcaat atggtttgct gtatttgagt 7680
ataaacagct cagtgttaat tatatcaaag gaagttcttt acatcttcat tgattacaaa 7740
atttaccaaa gaaaatgtat ctaccaaata taatttttaa agtacttgtt aaggaatgag 7800
gcctctttaa catataaagt atcttaaaaa tattctctga cctggaaaat aggtttacag 7860
tagctacaag attccatttt aggttttctt atgtcaataa atgtcaatat tttacacttc 7920
cagcaaaagt acccgttaaa gctaaatcta aatattattc ctcatagcac agtttctggt 7980
ctccttaaat taaggatcct actcatcagg attgaataaa aagggggaaa ttcctaaaat 8040
tggtatattg tataatattg tgggttaagt aaaatttagg ggggcattat ggaaatgtac 8100
ctattttaaa gggcagtggc aattactata atattggtta aactggtaaa gtttgttaaa 8160
taatttatgt ccatgatcat tctgagtgtt ttttttcttt gcagaaaaac aggattgggt 8220
taagaaaagc taaaatactc atttttttaa aatgtatagc ccaataagaa ctaaatgatt 8280
tatttcaaaa gttaaataat tttttttgga aatcatggaa tgtatttgca tattgatgtt 8340
ccaaacaggt tttatgtatt gttttttata gcagggagta gttgaaaagt aatgagtata 8400
ttgattagct gtcttggaaa gagaggattg gctttctaac aatcactgat acaggtttgg 8460
gtttgggggg gtttgtttgt ttgtttttaa gttttatcat ccatactgaa ttgagagata 8520
tgctccatgt ttaaaaatat ttgtaataag ttcatctact tgacactgaa tcttttttat 8580
tcttactcta aaattattct ggctttacat tcagtttaag tggttaagtg aaacagtttt 8640
tagggtgcaa aaattatttt cccactgttt ttctcatgat aatttgagtc tcctgagcta 8700
taatttctga aggattttta ctactttggc attatgtaat ctgatctctg tcacaatgat 8760
attaaataag aactatctca ctttcatatg tttgcttcat aaaaggatat ggaatgtaca 8820
catcagctct tttttttttt ttaaactagc atcaacctat aacttggtat aaacttccca 8880
agtatttaga gaatagtgct ggtgaaaatt taaataggat aggcatatag aaattatgac 8940
ttgtattgag tgatgtcctt tcaacctagg actagtgaca accttcattt tttcagagct 9000
gaagaaaaaa ccgtgaattt aagatcatat ttattggtgc atgtaagcca ttatcctgtc 9060
ttaatgaacc gattaatgct gttgattgtt gaaatgtgaa atgtagtcac tgttgacctt 9120
gtaaatatct gccagagatg aaaaaatatt ttaagttatt gtaaataaag atgtataaaa 9180
ttcagtatca gtctgcaatg cagaaacata tcttagatgt taaaatactg tgtttgagag 9240
atgtgtaatt tacccttaga tgtatctagt tacattaaga gtgtaaattt ttttgtacag 9300
tataaaaata cagctctatt tggcttttaa ctgga 9335
<210> 11
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 11
cactctgagt tcatcagcaa acg 23
<210> 12
<211> 19
<212> DNA
<213> Artificial sequence (Artificial)
<400> 12
acgagaagcg gtcccaaag 19
<210> 13
<211> 18
<212> DNA
<213> Artificial sequence (Artificial)
<400> 13
ccgctctgca ggctgttc 18
<210> 14
<211> 21
<212> DNA
<213> Artificial sequence (Artificial)
<400> 14
tctgcgcgga catacttctt t 21
<210> 15
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 15
ggatgcttga agatggaaag aaa 23
<210> 16
<211> 25
<212> DNA
<213> Artificial sequence (Artificial)
<400> 16
cctgcttgcc tagcataaac ttaaa 25
<210> 17
<211> 17
<212> DNA
<213> Artificial sequence (Artificial)
<400> 17
ctgcgctccc gtttcct 17
<210> 18
<211> 20
<212> DNA
<213> Artificial sequence (Artificial)
<400> 18
ggacctcagt ggcctgtttg 20
<210> 19
<211> 22
<212> DNA
<213> Artificial sequence (Artificial)
<400> 19
cctggagggt catctctagc at 22
<210> 20
<211> 26
<212> DNA
<213> Artificial sequence (Artificial)
<400> 20
actttctccc gatagtcctt aatcag 26
<210> 21
<211> 21
<212> DNA
<213> Artificial sequence (Artificial)
<400> 21
gggaagaccc agtggtagct t 21
<210> 22
<211> 22
<212> DNA
<213> Artificial sequence (Artificial)
<400> 22
ccaaatactg gccaacacaa aa 22
<210> 23
<211> 28
<212> DNA
<213> Artificial sequence (Artificial)
<400> 23
tgatggaagt gtagggttta tgaattat 28
<210> 24
<211> 17
<212> DNA
<213> Artificial sequence (Artificial)
<400> 24
atgggccgct cacaaca 17
<210> 25
<211> 21
<212> DNA
<213> Artificial sequence (Artificial)
<400> 25
ggtccctagc ctgcaacatt t 21
<210> 26
<211> 20
<212> DNA
<213> Artificial sequence (Artificial)
<400> 26
atcggcagct cctgaacttc 20
<210> 27
<211> 25
<212> DNA
<213> Artificial sequence (Artificial)
<400> 27
ccttcaccta ttgctacacc accta 25
<210> 28
<211> 22
<212> DNA
<213> Artificial sequence (Artificial)
<400> 28
gaaccagacc cagacctttc ag 22
<210> 29
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 29
gtggtgccaa aaatcaatag ctt 23
<210> 30
<211> 20
<212> DNA
<213> Artificial sequence (Artificial)
<400> 30
ccccaatgct ggtacttgct 20
<210> 31
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 31
cctggcgtct gtcctcacca tgc 23
<210> 32
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 32
tcctcggcct cgtcacgtgt tca 23
<210> 33
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 33
tcctcccggg acagaaacaa gcc 23
<210> 34
<211> 25
<212> DNA
<213> Artificial sequence (Artificial)
<400> 34
atgccagacg aaagcgccgt aactt 25
<210> 35
<211> 26
<212> DNA
<213> Artificial sequence (Artificial)
<400> 35
agcagaagac cgacacctcc gacaag 26
<210> 36
<211> 23
<212> DNA
<213> Artificial sequence (Artificial)
<400> 36
agacacccgg gaatccatgc acg 23
<210> 37
<211> 30
<212> DNA
<213> Artificial sequence (Artificial)
<400> 37
cagctgacta ccatacctca cacagcgttg 30
<210> 38
<211> 24
<212> DNA
<213> Artificial sequence (Artificial)
<400> 38
aatccgaaga gtgatgccca ccca 24
<210> 39
<211> 28
<212> DNA
<213> Artificial sequence (Artificial)
<400> 39
agttcatctt gctctgatgc tcccatgc 28
<210> 40
<211> 27
<212> DNA
<213> Artificial sequence (Artificial)
<400> 40
tctaatccgg acagccagtg cttcctc 27

Claims (11)

1. A combination of peripheral blood transcriptional gene markers for detecting breast cancer, said peripheral blood transcriptional gene markers being differentially expressed in peripheral blood cells of a population having breast cancer and normal distribution at the same age, the sequence of said peripheral blood transcriptional gene markers being SEQ ID NO:1 to SEQ ID NO: shown at 10.
2. The composition consists of primers and/or probes for specifically detecting peripheral blood transcription gene markers which are differentially expressed in peripheral blood cells of breast cancer and people with normal age distribution, wherein the sequence of the peripheral blood transcription gene markers is SEQ ID NO:1 to SEQ ID NO: shown at 10.
3. Use of a combination of peripheral blood transcriptional gene markers according to claim 1 for the preparation of a product for the detection of breast cancer.
4. Use according to claim 3, wherein said product for detecting breast cancer comprises: products for detecting breast cancer by real-time quantitative PCR, RNA sequencing or gene chip.
5. The use according to claim 4, wherein the product for the detection of breast cancer by real-time quantitative PCR comprises the specific amplification of the nucleic acid sequence of SEQ ID NO:1 to SEQ ID NO:10, or a primer having a sequence shown in figure 10.
6. The use according to claim 4, wherein the product for detecting breast cancer by RNA sequencing comprises the nucleic acid sequence of SEQ ID NO: 1-SEQ ID NO:10, or a messenger RNA sequence of the sequence shown in figure 10.
7. The use according to claim 4, wherein the product for detecting breast cancer using gene chip comprises: and SEQ ID NO:1 to SEQ ID NO:10, or a fragment thereof.
8. A kit for detecting breast cancer is characterized in that specific primers and/or probes for detecting breast cancer are provided in the kit, the specific primers and/or probes are specific primers and/or probes for specifically detecting a combination of peripheral blood transcriptional gene markers which are differentially expressed in peripheral blood cells of a population with normal age distribution and breast cancer, and the sequence of the peripheral blood transcriptional gene markers is SEQ ID NO:1 to SEQ ID NO: shown at 10.
9. The kit of claim 8, wherein the primer has the sequence of SEQ ID NO:11 to SEQ ID NO:30 under stringent conditions.
10. The kit of claim 8, wherein the sequence of the probe is SEQ ID NO: 31-SEQ ID NO:40, or a nucleotide sequence shown in the specification.
11. A gene chip for detecting breast cancer is characterized in that an oligonucleotide hybridization probe for detecting breast cancer on the gene chip is a hybridization probe for specifically detecting the combination of peripheral blood transcription gene markers which are differentially expressed in peripheral blood cells of a population with normal distribution in the same age, and the peripheral blood transcription gene markers are SEQ ID NO:1 to SEQ ID NO: shown at 10.
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CN111653315A (en) * 2020-05-29 2020-09-11 杭州广科安德生物科技有限公司 Method for constructing mathematical model for detecting breast cancer in vitro and application thereof
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