CN109643584A - 用于预测个体生物状态的系统、方法和基因标签 - Google Patents

用于预测个体生物状态的系统、方法和基因标签 Download PDF

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Publication number
CN109643584A
CN109643584A CN201780050613.8A CN201780050613A CN109643584A CN 109643584 A CN109643584 A CN 109643584A CN 201780050613 A CN201780050613 A CN 201780050613A CN 109643584 A CN109643584 A CN 109643584A
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China
Prior art keywords
gene
label
computer
group
smoker
Prior art date
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Pending
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CN201780050613.8A
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English (en)
Chinese (zh)
Inventor
C·普森
V·贝尔卡斯特罗
F·马丁
S·布韦
M·C·派奇
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Philip Morris Products SA
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Philip Morris Products SA
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Publication of CN109643584A publication Critical patent/CN109643584A/zh
Pending legal-status Critical Current

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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • A—HUMAN NECESSITIES
    • A24—TOBACCO; CIGARS; CIGARETTES; SIMULATED SMOKING DEVICES; SMOKERS' REQUISITES
    • A24F—SMOKERS' REQUISITES; MATCH BOXES; SIMULATED SMOKING DEVICES
    • A24F42/00—Simulated smoking devices other than electrically operated; Component parts thereof; Manufacture or testing thereof
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H70/00—ICT specially adapted for the handling or processing of medical references
    • G16H70/60—ICT specially adapted for the handling or processing of medical references relating to pathologies
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

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  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Molecular Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Public Health (AREA)
  • Epidemiology (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Data Mining & Analysis (AREA)
  • Databases & Information Systems (AREA)
  • Bioethics (AREA)
  • Evolutionary Computation (AREA)
  • Artificial Intelligence (AREA)
  • Software Systems (AREA)
  • Primary Health Care (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
CN201780050613.8A 2016-09-14 2017-05-30 用于预测个体生物状态的系统、方法和基因标签 Pending CN109643584A (zh)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201662394551P 2016-09-14 2016-09-14
US62/394,551 2016-09-14
PCT/EP2017/063073 WO2018050299A1 (en) 2016-09-14 2017-05-30 Systems, methods, and gene signatures for predicting a biological status of an individual

Publications (1)

Publication Number Publication Date
CN109643584A true CN109643584A (zh) 2019-04-16

Family

ID=59021473

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201780050613.8A Pending CN109643584A (zh) 2016-09-14 2017-05-30 用于预测个体生物状态的系统、方法和基因标签

Country Status (8)

Country Link
US (1) US20190244677A1 (enExample)
EP (1) EP3513344A1 (enExample)
JP (2) JP7022119B2 (enExample)
KR (2) KR102421109B1 (enExample)
CN (1) CN109643584A (enExample)
CA (1) CA3036597C (enExample)
MX (1) MX2019002316A (enExample)
WO (1) WO2018050299A1 (enExample)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113159571A (zh) * 2021-04-20 2021-07-23 中国农业大学 一种跨境外来物种风险等级判定及智能识别方法及系统

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR102517328B1 (ko) * 2021-03-31 2023-04-04 주식회사 크라우드웍스 작업툴을 이용한 이미지 내 세포 분별에 관한 작업 수행 방법 및 프로그램

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20100131432A1 (en) * 2008-11-17 2010-05-27 Kennedy Giulia C Methods and compositions of molecular profiling for disease diagnostics
WO2013032917A2 (en) * 2011-08-29 2013-03-07 Cardiodx, Inc. Methods and compositions for determining smoking status
WO2015091225A1 (en) * 2013-12-16 2015-06-25 Philip Morris Products S.A. Systems and methods for predicting a smoking status of an individual
US20150322514A1 (en) * 2012-09-06 2015-11-12 Duke University Diagnostic markers for platelet function and methods of use
WO2016073768A1 (en) * 2014-11-05 2016-05-12 Veracyte, Inc. Systems and methods of diagnosing idiopathic pulmonary fibrosis on transbronchial biopsies using machine learning and high dimensional transcriptional data

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005000098A2 (en) * 2003-06-10 2005-01-06 The Trustees Of Boston University Detection methods for disorders of the lung
JP2006314315A (ja) * 2005-05-10 2006-11-24 Synergenz Bioscience Ltd 肺の機能と異常を調べるための方法と組成物
EP2605018A1 (en) * 2006-03-09 2013-06-19 The Trustees of the Boston University Diagnostic and prognostic methods for lung disorders using gene expression profiles from nose epithelial cells
WO2009121070A1 (en) * 2008-03-28 2009-10-01 The Trustees Of Boston University Multifactorial methods for detecting lung disorders
CA2753562A1 (en) * 2009-02-26 2010-09-02 The Ohio State University Research Foundation Micrornas in never-smokers and related materials and methods
US20120245952A1 (en) * 2011-03-23 2012-09-27 University Of Rochester Crowdsourcing medical expertise
WO2016011068A1 (en) * 2014-07-14 2016-01-21 Allegro Diagnostics Corp. Methods for evaluating lung cancer status

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20100131432A1 (en) * 2008-11-17 2010-05-27 Kennedy Giulia C Methods and compositions of molecular profiling for disease diagnostics
WO2013032917A2 (en) * 2011-08-29 2013-03-07 Cardiodx, Inc. Methods and compositions for determining smoking status
US20150178462A1 (en) * 2011-08-29 2015-06-25 Cardiodx, Inc. Methods and Compositions for Determining Smoking Status
US20150322514A1 (en) * 2012-09-06 2015-11-12 Duke University Diagnostic markers for platelet function and methods of use
WO2015091225A1 (en) * 2013-12-16 2015-06-25 Philip Morris Products S.A. Systems and methods for predicting a smoking status of an individual
WO2016073768A1 (en) * 2014-11-05 2016-05-12 Veracyte, Inc. Systems and methods of diagnosing idiopathic pulmonary fibrosis on transbronchial biopsies using machine learning and high dimensional transcriptional data

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113159571A (zh) * 2021-04-20 2021-07-23 中国农业大学 一种跨境外来物种风险等级判定及智能识别方法及系统

Also Published As

Publication number Publication date
MX2019002316A (es) 2019-06-24
KR102421109B1 (ko) 2022-07-14
CA3036597A1 (en) 2018-03-22
JP2019532410A (ja) 2019-11-07
KR20190046940A (ko) 2019-05-07
KR20220103819A (ko) 2022-07-22
EP3513344A1 (en) 2019-07-24
JP2022062189A (ja) 2022-04-19
JP7275334B2 (ja) 2023-05-17
BR112019004920A2 (pt) 2019-06-04
US20190244677A1 (en) 2019-08-08
WO2018050299A1 (en) 2018-03-22
CA3036597C (en) 2023-03-28
KR102685289B1 (ko) 2024-07-16
JP7022119B2 (ja) 2022-02-17

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