CN109486839B - Application of arabidopsis MAPKKK kinase in breeding - Google Patents

Application of arabidopsis MAPKKK kinase in breeding Download PDF

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CN109486839B
CN109486839B CN201910060341.0A CN201910060341A CN109486839B CN 109486839 B CN109486839 B CN 109486839B CN 201910060341 A CN201910060341 A CN 201910060341A CN 109486839 B CN109486839 B CN 109486839B
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leu
plants
arabidopsis
breeding
drought
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CN109486839A (en
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刘鹰高
陈沫先
武茹茹
朱福远
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Shandong Agricultural University
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    • C12N15/8271Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
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    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/11Protein-serine/threonine kinases (2.7.11)
    • C12Y207/11025Mitogen-activated protein kinase kinase kinase (2.7.11.25), i.e. MAPKKK or MAP3K

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Abstract

The invention discloses application of arabidopsis MAPKKK kinase in breeding, and relates to the technical field of agricultural breeding. The breeding comprises the creation of drought-resistant germplasm and early-flowering germplasm of cruciferous plants by a transgenic technology. The cruciferous plants include rape and cauliflower. There are four shears for the MAPKKK kinase, named AS1, AS2, AS3, and AS 4; the overexpression plant AS1-OE of the AS1 and the mutant CRISPRAS3-2 with the AS3 deletion show an drought-resistant phenotype; the AS3-OE plant and the AS 1-deleted mutant CRISPRAS1-1 both show drought-resistant phenotype; the AS1-OE plants and AS2/4-OE plants exhibited an early flowering phenotype and the AS3-OE plants exhibited a late flowering phenotype. The research can provide theoretical basis for the transgenic breeding work of cruciferous plants.

Description

Application of arabidopsis MAPKKK kinase in breeding
Technical Field
The invention relates to the technical field of agricultural breeding, in particular to application of arabidopsis MAPKKK kinase in breeding.
Background
Arabidopsis genus is Brassicaceae, angiosperma, dicotyledonous class. Biennial herbs with height of 7-40 cm. Basal leaves have a lotus-shaped handle and an inverted oval or spoon shape; the cauline leaves have no stem and are in the shape of needles or threads. The raceme is terminal and the petals are 4 pieces and white. The arabidopsis thaliana has the advantages of small plant, short generation time, more knots and strong vitality. The genome of arabidopsis thaliana is 1/80 of the currently known plant genome, which makes it relatively easy to clone its related genes.
The studies of Arabidopsis thaliana include forward genetics and reverse genetics. Forward genetics follows a thought from phenotypic analysis of mutants to genetic function recognition, which focuses first on mutants with certain defects. For example, if the gene regulation process involved in the drought resistance mechanism of plants is to be studied, the wild type Arabidopsis thaliana may be mutagenized chemically, physically or biologically, and then subjected to screening for mutants under drought stress. If an individual that responds differently to drought conditions than the wild type (e.g., a plant that is more or less drought-resistant than the wild type) appears in the progeny of the mutagenized population, such an individual is a mutant. The different responses of the plants to drought may be caused by the fact that a certain gene in the mutant is damaged, and the gene is necessarily related to the drought resistance mechanism of the plants. After such a mutant is obtained, the mutant gene can be located and cloned. After the gene sequence is obtained, the function of the gene can be further understood, and the form of the gene affecting the drought-resistant way of plants and the relation of other related genes in the drought-resistant way can be analyzed.
In view of the advantages of Arabidopsis in genetic operation, the method is widely applied to the research of all processes of the whole life activity of plants, and a series of important findings are obtained; however, the research on the arabidopsis protein kinase and the influence of the arabidopsis protein kinase on the growth of arabidopsis are still needed to be further researched and applied to the cultivation of arabidopsis, so that a theoretical basis is provided for the future breeding work.
Disclosure of Invention
In view of this, the embodiment of the invention provides an application of arabidopsis MAPKKK kinase in breeding.
In order to achieve the purpose, the invention mainly provides the following technical scheme:
in one aspect, the embodiment of the invention provides an application of arabidopsis MAPKKK kinase in breeding.
Preferably, the breeding comprises creating drought resistant and early flowering germplasm of crucifers by transgenic techniques.
Preferably, the cruciferous plants include rape and cauliflower.
Preferably, there are four shears for the MAPKKK kinase, designated AS1, AS2, AS3 and AS 4; the nucleotide sequence of AS1 is SEQ ID NO.1, the nucleotide sequence of AS2 is SEQ ID NO.2, the nucleotide sequence of AS3 is SEQ ID NO.3, and the nucleotide sequence of AS4 is SEQ ID NO. 4; the amino acid sequence of the protein encoded by AS1 is SEQ ID NO.5, the amino acid sequences of the proteins encoded by AS2 and AS4 are SEQ ID NO.6, and the amino acid sequence of the protein encoded by AS3 is SEQ ID NO. 6.
Preferably, the overexpression plant AS1-OE of AS1 and the mutant CRISPRAS3-2 with AS3 deletion both show a non-drought resistant phenotype; both AS3-OE plants and the AS 1-deleted mutant CRISPRAS1-1 exhibited a drought resistant phenotype.
Preferably, the AS1-OE plants and AS2/4-OE plants exhibit an early flowering phenotype and the AS3-OE plants exhibit a late flowering phenotype.
Compared with the prior art, the invention has the beneficial effects that:
aiming at the technical problem that the breeding work of arabidopsis can not be accurately carried out, for example, drought-resistant arabidopsis can not be selected through gene operation or early flowering or late flowering can not be selected according to actual needs, various experiments prove that the arabidopsis MAPKKKK kinase has four shearing bodies which respectively have drought resistance/drought resistance and early flowering/late flowering phenotypes, and through the research, the needed arabidopsis seeds are screened out for cultivation through transgenic research and analysis on arabidopsis seed genes, so that the seed selection is accurate, and the time is saved.
Drawings
FIG. 1 is a diagram of the four splice bodies and three protein models of an Arabidopsis based 47MAPKKK kinase provided by the invention;
FIG. 2 is a scanning electron microscope of protoplast localization of Arabidopsis thaliana with three proteins of gene 47 provided by the present invention;
FIG. 3 is a diagram of the drought resistant phenotype planting of a transgenic plant related to gene 47 provided by the present invention;
FIG. 4 is a flowering phenotype planting map of the gene 47 overexpression plant provided by the invention.
Detailed Description
To further illustrate the technical means and effects of the present invention adopted to achieve the predetermined objects, the following detailed description of the embodiments, technical solutions, features and effects according to the present invention will be given with preferred embodiments. The particular features, structures, or characteristics may be combined in any suitable manner in the embodiments or embodiments described below.
Example 1
This example 1 provides an application of arabidopsis MAPKKK kinase in breeding; wherein, the arabidopsis 47 gene is MAPKKK kinase, and 2 variable shears thereof have two phenotypes of drought resistance and early flowering respectively; 47 genes are present in four isoforms (AS shown in FIG. 1), designated AS1, AS2, AS3 and AS 4; the nucleotide sequence of AS1 is SEQ ID NO.1, the nucleotide sequence of AS2 is SEQ ID NO.2, the nucleotide sequence of AS3 is SEQ ID NO.3, and the nucleotide sequence of AS4 is SEQ ID NO. 4; the amino acid sequence of the protein coded by AS1 is SEQ ID NO.5, the amino acid sequences of the proteins coded by AS2 and AS4 are SEQ ID NO.6, the amino acid sequence of the protein coded by AS3 is SEQ ID NO.6, and the three proteins are positioned in cell nucleus and cytoplasm through GFP; the drought-resistant phenotype experiment shows that the 47 gene full-deletion mutant is not drought-resistant compared with the wild type as shown in figure 3; meanwhile, the over-expression plant AS1-OE of the AS1 and the mutant CRISPRAS3-2 with the AS3 deletion show an drought-resistant phenotype; the AS3-OE plant and the AS 1-deleted mutant CRISPRAS1-1 both show drought-resistant phenotype; the AS1-OE plants and AS2/4-OE plants exhibited an early flowering phenotype and the AS3-OE plants exhibited a late flowering phenotype, AS shown in FIG. 4; different splice bodies of a single gene have different phenotypes, which increase gene reserve for plant drought resistance and flowering phase control. The above four cDNA sequences and three protein amino acid sequences of example 1 were obtained by PCR amplification of Arabidopsis total RNA followed by sequencing.
The research of the invention can be applied to the transgenic breeding work of cruciferous plants (rape, cauliflower and the like), such as creating drought-resistant germplasm and early flowering germplasm, and providing theoretical basis for the breeding work.
The embodiments of the present invention are not exhaustive, and those skilled in the art can select them from the prior art.
The above disclosure is only for the specific embodiments of the present invention, but the scope of the present invention is not limited thereto, and any person skilled in the art can easily conceive of the changes or substitutions within the technical scope of the present invention, and shall be covered by the scope of the present invention. Therefore, the protection scope of the present invention shall be subject to the protection scope of the above claims.
Sequence listing
<110> Shandong university of agriculture
<120> application of Arabidopsis MAPKKKK kinase in breeding
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atgagtagcg atgatacgat tgaggagagt ttgcttgtgg atcccaaatt gttgttcatc 60
ggctccaaga ttggtgaagg cgctcacggc aaagtctacc aaggaaggta tggtcgtcag 120
attgttgcaa tcaaagttgt caaccggggc tccaaacctg accagcaatc ttctctcgag 180
agccgtttcg tccgtgaggt caatatgatg tcccgcgttc aacaccataa ccttgtcaag 240
gtctctctcc ttctttcttc tctttctttg ctctcgatac ttcttcttga atacacaata 300
tccatttggc agtttattgg agcgtgcaaa gatcctttaa tggtaatagt aacagagctt 360
ctcccaggga tgtctctccg taaatatctc accagcatcc gtcctcagtt gctccatctc 420
cctcttgctc tctcctttgc ccttgacatc gcccgtgcct tgcactgctt acacgccaat 480
ggtatcattc acagagacct caaacctgac aacttattgc tcacggagaa tcacaaatcc 540
gtcaagcttg ctgatttcgg gcttgctagg gaagaatccg tgactgagat gatgactgct 600
gagactggga cttaccgttg gatggctcct gaggtttttg cccgctctgt cattcttgta 660
aatcatacca ctatttgaca ttataaaaaa gccatatatg catgtcttgt gttcgtgtca 720
tccgtagctc tacagtacag tgaccctgcg tcaaggagag aagaagcatt acaacaacaa 780
agttgatgtc tacagctttg gaatcgtgct ttgggagctt ctcactaatc gtatgccatt 840
cgagggcatg tccaatctgc aagccgccta cgcagcagca ttcaagcagg agaggcccgt 900
aatgccagag gggatatctc cgagtctggc gttcatagtg cagtcttgtt gggtggagga 960
cccaaacatg aggccaagct tcagtcaaat tatcagactg ctcaatgagt tcctccttac 1020
cctgactcct ccgcctcctc agcctctgcc tgagactgcc accaacagga ccaatggccg 1080
agccatcact gagttctcca tccgtccaaa agggaaattt gccttcattc gccagctttt 1140
cgctgccaag aggaacataa actcttag 1168
<210> 2
<211> 1077
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atgagtagcg atgatacgat tgaggagagt ttgcttgtgg atcccaaatt gttgttcatc 60
ggctccaaga ttggtgaagg cgctcacggc aaagtctacc aaggaaggta tggtcgtcag 120
attgttgcaa tcaaagttgt caaccggggc tccaaacctg accagcaatc ttctctcgag 180
agccgtttcg tccgtgaggt caatatgatg tcccgcgttc aacaccataa ccttgtcaag 240
atcctttaat ggtaatagta acagagcttc tcccagggat gtctctccgt aaatatctca 300
ccagcatccg tcctcagttg ctccatctcc ctcttgctct ctcctttgcc cttgacatcg 360
cccgtgcctt gcactgctta cacgccaatg gtatcattca cagagacctc aaacctgaca 420
acttattgct cacggagaat cacaaatccg tcaagcttgc tgatttcggg cttgctaggg 480
aagaatccgt gactgagatg atgactgctg agactgggac ttaccgttgg atggctcctg 540
aggtttttgc ccgctctgtc attcttgtaa atcataccac tatttgacat tataaaaaag 600
ccatatatgc atgtcttgtg ttcgtgtcat ccgtagctct acagtacagt gaccctgcgt 660
caaggagaga agaagcatta caacaacaaa gttgatgtct acagctttgg aatcgtgctt 720
tgggagcttc tcactaatcg tatgccattc gagggcatgt ccaatctgca agccgcctac 780
gcagcagcat tcaagcagga gaggcccgta atgccagagg ggatatctcc gagtctggcg 840
ttcatagtgc agtcttgttg ggtggaggac ccaaacatga ggccaagctt cagtcaaatt 900
atcagactgc tcaatgagtt cctccttacc ctgactcctc cgcctcctca gcctctgcct 960
gagactgcca ccaacaggac caatggccga gccatcactg agttctccat ccgtccaaaa 1020
gggaaatttg ccttcattcg ccagcttttc gctgccaaga ggaacataaa ctcttag 1077
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atgagtagcg atgatacgat tgaggagagt ttgcttgtgg atcccaaatt gttgttcatc 60
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attgttgcaa tcaaagttgt caaccggggc tccaaacctg accagcaatc ttctctcgag 180
agccgtttcg tccgtgaggt caatatgatg tcccgcgttc aacaccataa ccttgtcaag 240
tttattggag cgtgcaaaga tcctttaatg gtaatagtaa cagagcttct cccagggatg 300
tctctccgta aatatctcac cagcatccgt cctcagttgc tccatctccc tcttgctctc 360
tcctttgccc ttgacatcgc ccgtgccttg cactgcttac acgccaatgg tatcattcac 420
agagacctca aacctgacaa cttattgctc acggagaatc acaaatccgt caagcttgct 480
gatttcgggc ttgctaggga agaatccgtg actgagatga tgactgctga gactgggact 540
taccgttgga tggctcctga gctctacagt acagtgaccc tgcgtcaagg agagaagaag 600
cattacaaca acaaagttga tgtctacagc tttggaatcg tgctttggga gcttctcact 660
aatcgtatgc cattcgaggg catgtccaat ctgcaagccg cctacgcagc agcattcaag 720
caggagaggc ccgtaatgcc agaggggata tctccgagtc tggcgttcat agtgcagtct 780
tgttgggtgg aggacccaaa catgaggcca agcttcagtc aaattatcag actgctcaat 840
gagttcctcc ttaccctgac tcctccgcct cctcagcctc tgcctgagac tgccaccaac 900
aggaccaatg gccgagccat cactgagttc tccatccgtc caaaagggaa atttgccttc 960
attcgccagc ttttcgctgc caagaggaac ataaactctt ag 1002
<210> 4
<211> 983
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
atgagtagcg atgatacgat tgaggagagt ttgcttgtgg atcccaaatt gttgttcatc 60
ggctccaaga ttggtgaagg cgctcacggc aaagtctacc aaggaaggta tggtcgtcag 120
attgttgcaa tcaaagttgt caaccggggc tccaaacctg accagcaatc ttctctcgag 180
agccgtttcg tccgtgaggt caatatgatg tcccgcgttc aacaccataa ccttgtcaag 240
atcctttaat ggtaatagta acagagcttc tcccagggat gtctctccgt aaatatctca 300
ccagcatccg tcctcagttg ctccatctcc ctcttgctct ctcctttgcc cttgacatcg 360
cccgtgcctt gcactgctta cacgccaatg gtatcattca cagagacctc aaacctgaca 420
acttattgct cacggagaat cacaaatccg tcaagcttgc tgatttcggg cttgctaggg 480
aagaatccgt gactgagatg atgactgctg agactgggac ttaccgttgg atggctcctg 540
agctctacag tacagtgacc ctgcgtcaag gagagaagaa gcattacaac aacaaagttg 600
atgtctacag ctttggaatc gtgctttggg agcttctcac taatcgtatg ccattcgagg 660
gcatgtccaa tctgcaagcc gcctacgcag cagcattcaa gcaggagagg cccgtaatgc 720
cagaggggat atctccgagt ctggcgttca tagtgcagtc ttgttgggtg gaggacccaa 780
acatgaggcc aagcttcagt caaattatca gactgctcaa tgagttcctc cttaccctga 840
ctcctccgcc tcctcagcct ctgcctgaga ctgccaccaa caggaccaat ggccgagcca 900
tcactgagtt ctccatccgt ccaaaaggga aatttgcctt cattcgccag cttttcgctg 960
ccaagaggaa cataaactct tag 983
<210> 5
<211> 225
<212> PRT
<213> Artificial Sequence (Artificial Sequence)
<400> 5
Met Ser Ser Asp Asp Thr Ile Glu Glu Ser Leu Leu Val Asp Pro Lys
1 5 10 15
Leu Leu Phe Ile Gly Ser Lys Ile Gly Glu Gly Ala His Gly Lys Val
20 25 30
Tyr Gln Gly Arg Tyr Gly Arg Gln Ile Val Ala Ile Lys Val Val Asn
35 40 45
Arg Gly Ser Lys Pro Asp Gln Gln Ser Ser Leu Glu Ser Arg Phe Val
50 55 60
Arg Glu Val Asn Met Met Ser Arg Val Gln His His Asn Leu Val Lys
65 70 75 80
Val Ser Leu Leu Leu Ser Ser Leu Ser Leu Leu Ser Ile Leu Leu Leu
85 90 95
Glu Tyr Thr Ile Ser Ile Trp Gln Phe Ile Gly Ala Cys Lys Asp Pro
100 105 110
Leu Met Val Ile Val Thr Glu Leu Leu Pro Gly Met Ser Leu Arg Lys
115 120 125
Tyr Leu Thr Ser Ile Arg Pro Gln Leu Leu His Leu Pro Leu Ala Leu
130 135 140
Ser Phe Ala Leu Asp Ile Ala Arg Ala Leu His Cys Leu His Ala Asn
145 150 155 160
Gly Ile Ile His Arg Asp Leu Lys Pro Asp Asn Leu Leu Leu Thr Glu
165 170 175
Asn His Lys Ser Val Lys Leu Ala Asp Phe Gly Leu Ala Arg Glu Glu
180 185 190
Ser Val Thr Glu Met Met Thr Ala Glu Thr Gly Thr Tyr Arg Trp Met
195 200 205
Ala Pro Glu Val Phe Ala Arg Ser Val Ile Leu Val Asn His Thr Thr
210 215 220
Ile
225
<210> 6
<211> 82
<212> PRT
<213> Artificial Sequence (Artificial Sequence)
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Met Ser Ser Asp Asp Thr Ile Glu Glu Ser Leu Leu Val Asp Pro Lys
1 5 10 15
Leu Leu Phe Ile Gly Ser Lys Ile Gly Glu Gly Ala His Gly Lys Val
20 25 30
Tyr Gln Gly Arg Tyr Gly Arg Gln Ile Val Ala Ile Lys Val Val Asn
35 40 45
Arg Gly Ser Lys Pro Asp Gln Gln Ser Ser Leu Glu Ser Arg Phe Val
50 55 60
Arg Glu Val Asn Met Met Ser Arg Val Gln His His Asn Leu Val Lys
65 70 75 80
Ile Leu
<210> 7
<211> 333
<212> PRT
<213> Artificial Sequence (Artificial Sequence)
<400> 7
Met Ser Ser Asp Asp Thr Ile Glu Glu Ser Leu Leu Val Asp Pro Lys
1 5 10 15
Leu Leu Phe Ile Gly Ser Lys Ile Gly Glu Gly Ala His Gly Lys Val
20 25 30
Tyr Gln Gly Arg Tyr Gly Arg Gln Ile Val Ala Ile Lys Val Val Asn
35 40 45
Arg Gly Ser Lys Pro Asp Gln Gln Ser Ser Leu Glu Ser Arg Phe Val
50 55 60
Arg Glu Val Asn Met Met Ser Arg Val Gln His His Asn Leu Val Lys
65 70 75 80
Phe Ile Gly Ala Cys Lys Asp Pro Leu Met Val Ile Val Thr Glu Leu
85 90 95
Leu Pro Gly Met Ser Leu Arg Lys Tyr Leu Thr Ser Ile Arg Pro Gln
100 105 110
Leu Leu His Leu Pro Leu Ala Leu Ser Phe Ala Leu Asp Ile Ala Arg
115 120 125
Ala Leu His Cys Leu His Ala Asn Gly Ile Ile His Arg Asp Leu Lys
130 135 140
Pro Asp Asn Leu Leu Leu Thr Glu Asn His Lys Ser Val Lys Leu Ala
145 150 155 160
Asp Phe Gly Leu Ala Arg Glu Glu Ser Val Thr Glu Met Met Thr Ala
165 170 175
Glu Thr Gly Thr Tyr Arg Trp Met Ala Pro Glu Leu Tyr Ser Thr Val
180 185 190
Thr Leu Arg Gln Gly Glu Lys Lys His Tyr Asn Asn Lys Val Asp Val
195 200 205
Tyr Ser Phe Gly Ile Val Leu Trp Glu Leu Leu Thr Asn Arg Met Pro
210 215 220
Phe Glu Gly Met Ser Asn Leu Gln Ala Ala Tyr Ala Ala Ala Phe Lys
225 230 235 240
Gln Glu Arg Pro Val Met Pro Glu Gly Ile Ser Pro Ser Leu Ala Phe
245 250 255
Ile Val Gln Ser Cys Trp Val Glu Asp Pro Asn Met Arg Pro Ser Phe
260 265 270
Ser Gln Ile Ile Arg Leu Leu Asn Glu Phe Leu Leu Thr Leu Thr Pro
275 280 285
Pro Pro Pro Gln Pro Leu Pro Glu Thr Ala Thr Asn Arg Thr Asn Gly
290 295 300
Arg Ala Ile Thr Glu Phe Ser Ile Arg Pro Lys Gly Lys Phe Ala Phe
305 310 315 320
Ile Arg Gln Leu Phe Ala Ala Lys Arg Asn Ile Asn Ser
325 330

Claims (4)

1. The application of an arabidopsis kinase MAPKKK in breeding is characterized in that the breeding comprises creating drought-resistant germplasm and early-flowering germplasm of cruciferous plants by a transgenic technology; there are four shears for the kinase MAPKKK, named AS1, AS2, AS3 and AS 4; the nucleotide sequence of AS1 is SEQ ID NO.1, the nucleotide sequence of AS2 is SEQ ID NO.2, the nucleotide sequence of AS3 is SEQ ID NO.3, and the nucleotide sequence of AS4 is SEQ ID NO. 4; the amino acid sequence of the protein encoded by AS1 is SEQ ID NO.5, the amino acid sequences of the proteins encoded by AS2 and AS4 are SEQ ID NO.6, and the amino acid sequence of the protein encoded by AS3 is SEQ ID NO. 7.
2. Use of the arabidopsis kinase MAPKKK in breeding according to claim 1, wherein the cruciferous plants comprise rape and cauliflower.
3. The use of an arabidopsis kinase MAPKKK in breeding according to claim 1, wherein the overexpression plant of AS1, mutant CRISPRAS3-2, lacking AS1-OE and AS3, both exhibit an drought-resistant phenotype; both AS3-OE plants and the AS 1-deleted mutant CRISPRAS1-1 exhibited a drought resistant phenotype.
4. The use of an arabidopsis kinase MAPKKK in breeding according to claim 3, wherein the AS1-OE plants and AS2/4-OE plants exhibit an early flowering phenotype and the AS3-OE plants exhibit a late flowering phenotype.
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