CN109055611A - For detecting the kit of HPV - Google Patents

For detecting the kit of HPV Download PDF

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CN109055611A
CN109055611A CN201810971577.5A CN201810971577A CN109055611A CN 109055611 A CN109055611 A CN 109055611A CN 201810971577 A CN201810971577 A CN 201810971577A CN 109055611 A CN109055611 A CN 109055611A
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ala
kit
glu
lys
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黄雅淑
翁义杰
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Shenzhen Xinsi Microbiological Technology Co Ltd
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    • C12Q1/6844Nucleic acid amplification reactions
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Q2600/166Oligonucleotides used as internal standards, controls or normalisation probes

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Abstract

The invention belongs to bioengineering fields, and in particular to a kind of for detecting the kit of HPV.The kit includes the primer and Uvs X, Uvs Y, SSB and archaeal dna polymerase for expanding HPV.In kit provided by the present invention for detecting HPV, the T4 serial enzymes i.e. Uvs X of combination and Uvs Y has been selected to replace existing recombinase, the enzyme system not only can be further improved the sensitivity and specificity of HPV detection, and it can more diversification to the primer selection of amplification HPV, 100-200bp product can be expanded under the conditions of compared with short primer, and then shortens the reaction time, reduce the interference of background signal, it is final to improve detection efficiency, significantly reduce testing cost.

Description

For detecting the kit of HPV
Technical field
The invention belongs to bioengineering fields, and in particular to a kind of for detecting the kit of HPV.
Background technique
Human papillomavirus (Human Papillomavirus, HPV) are a kind of microorganisms also smaller than bacterium, are filtrations One kind of venereal disease poison.In more than 200 kinds of hypotype HPV being currently known, about 40 kinds of hypotypes can invade female genital tract, at least 15 kinds of hypotypes are related with aggressive cervix cancer, referred to as carcinogenicity or high risk type, wherein the 16th type is most commonly seen, the 18th type Take second place, the two has accounted for the 70% of cervix cancer altogether.Human papillomavirus have the host specificity characteristic of height, specially The skin and mucous membrane of the mankind can be infected.Infect the 16th type and 18 type human papillomavirus and cervix cancer, carcinoma of penis, carcinoma of vulva and The formation of cancer of anus etc. is related.
At present on the market there are many kinds of the detection methods of HPV, including hybrid capture, fluorescence in situ hybridization, chip skill Art hybrid method, real-time fluorescence PCR method, spot marking method and constant-temperature amplification method etc., sensibility, the specificity of every kind of detection method are equal It is different.No matter which kind of detection method, cannot all detect all types, but also need be not excessively the problem of worry is failed to pinpoint a disease in diagnosis, It is only related with high-risk HPV because of the generation of cervix cancer, the infection of as noted above 70% cervical cancer patient be 16 types and 18 two, type hypotypes, other high-risk HPVs can be found substantially in existing detection method.Therefore, if high-risk HPV A possibility that testing result is feminine gender, then can exclude cervix cancer substantially.
An important technology that represents expands in constant-temperature amplification (Isothermal Amplification) as recombination enzymatic polymerization enzyme Increase (Recombinase Polymerase Amplification, RPA).This technology is opened by UK corporation Twist Dx Inc One kind of hair can substitute the novel nucleic acids detection technique of normal PCR.Using the technology, can be carried out under room temperature in 30 minutes Monomolecular nucleic acid detection, requirement of the technology to hardware device is lower, particularly suitable for in-vitro diagnosis, animal doctor, food peace Entirely, the fields such as bio-safety, agricultural.But there is also defects for existing RPA amplification technique, such as~500bp- > 500bp The target product selection of collocation (enzyme) be easy to cause poor sensitivity and reaction time long (see document: TwistAmp Manuals.Available from:www.twistdx.co.uk/resources/instruction_manuals/ Twistamp_product_documentatio n/), and expand after product have powerful connections signal interference the problem of (see text It offers: O.Piepenburg, C.H.Williams, D.L.Stemple and N.A.Armes, PLoS Biol., 2006,4, e204,1115–1121.).Therefore, which is further improved.
Summary of the invention
It is an object of the invention to overcome the above-mentioned deficiency of the prior art, provide a kind of for detecting the kit of HPV, purport When solving existing RPA method detection HPV, there are specificities and the not high technical problem of sensitivity.
For achieving the above object, The technical solution adopted by the invention is as follows:
The present invention provides a kind of for detecting the kit of HPV, and the kit includes the primer for expanding HPV, with And Uvs X, Uvs Y, SSB and archaeal dna polymerase.
The combination collocation of enzyme is very crucial in constant-temperature amplification method, and RPA technology depends on three kinds of zymoproteins: can be in conjunction with single Recombinase (Recombinase), single strand binding protein (SSB) and the strand displacement archaeal dna polymerase of chain nucleic acid (Oligonucleolide primers) (Polynerase), and provided by the present invention for detect HPV kit be a kind of kit based on constant-temperature amplification, at this In kit, the T4 serial enzymes i.e. Uvs X of combination and Uvs Y is selected to replace existing recombinase, the relatively existing skill of the enzyme system Art not only can be further improved the sensitivity and specificity of HPV detection, but also can be more more to the primer selection of amplification HPV Memberization can expand 100-200bp product under the conditions of compared with short primer, and then shorten the reaction time, reduce the dry of background signal It disturbs, finally improves detection efficiency, significantly reduce testing cost.
Detailed description of the invention
Fig. 1 is the electrophoretogram of the HPV testing result in the embodiment of the present invention 3;Wherein, 1 is DNA Marker, and 2 be the positive Control, 3 be HPV16 infection DNA sample, 4 be HPV18 infect DNA sample, 5 be negative control, 6 be blank control.
Specific embodiment
In order to which technical problems, technical solutions and advantageous effects to be solved by the present invention are more clearly understood, below in conjunction with Embodiment, the present invention will be described in further detail.It should be appreciated that specific embodiment described herein is only used to explain The present invention is not intended to limit the present invention.
The embodiment of the invention provides a kind of for detecting the kit of HPV, and the kit includes for expanding HPV's Primer and Uvs X, Uvs Y, SSB and archaeal dna polymerase.
The combination collocation of enzyme is very crucial in constant-temperature amplification method, and RPA technology depends on three kinds of zymoproteins: can be in conjunction with single Recombinase, single strand binding protein and the strand displacement archaeal dna polymerase of chain nucleic acid (Oligonucleolide primers), and the embodiment of the present invention provides For to detect the kit of HPV to be a kind of kit based on constant-temperature amplification, in the kit, selected T4 serial enzymes group Closing is that Uvs X and Uvs Y replace existing recombinase, the enzyme system not only can be further improved HPV detection sensitivity and Specificity, and to amplification HPV primer selection can more diversification, 100-200bp can be expanded under the conditions of compared with short primer Product, and then shorten the reaction time, the interference of background signal is reduced, detection efficiency is finally improved, significantly reduces testing cost.
The principle of RPA amplification at present are as follows: the protein-dna that recombinase (Recombinase) is formed in conjunction with primer is compound Object can find homologous sequence in double-stranded DNA, once primer located homologous sequence, Exchange reaction of chain will occur and formed simultaneously Start DNA synthesis, exponential amplification is carried out to the target area in template.The DNA chain and single strand binding protein (SSB) being replaced In conjunction with preventing from further replacing.In this system, open a synthetic reactions by two opposite primers, whole process into Capable very fastly, can generally obtain within 30 minutes can detect horizontal amplified production.During being somebody's turn to do, recombinase, single-stranded knot The mixture of these three enzymes of hop protein and strand displacement archaeal dna polymerase is also active at normal temperature, and optimal reaction temperature is on 37 DEG C of left sides The right side, but these three enzymes combination at present is long there are poor sensitivity and reaction time, the product after amplification has powerful connections signal interference is asked Topic.And in the embodiment of the present invention, on the basis of existing RPA, propose a kind of high quick amplification (Recombinant of recombination Sensitize Amplification, RSA), this method is a kind of improved novel constant-temperature amplification method, applied to being directed to The kit of HPV detection screens optimal enzyme combination (i.e. Uvs X, Uvs Y, SSB and DNA polymerization for product item in the kit Enzyme) existing enzyme is substituted, by simulating original DNA reproduction process, removes normal PCR temperature change to reach expanding effect, arrange in pairs or groups The exclusive primer designed for amplification HPV can shorten entire duplication time-histories, improve the accuracy and efficiency of duplication template, drop The interference of other low DNA/ background signals significantly reduces testing cost to improve detection time.
Further, described for expand the primer of HPV to include for expanding in kit provided in an embodiment of the present invention Increase the first primer pair of HPV16, and the nucleotide sequence of the first primer pair such as SEQ ID NO.1 and SEQ ID NO.2 institute Show.And the primer for expanding HPV includes the second primer pair for expanding HPV18, and second primer pair Nucleotide sequence is as shown in SEQ ID NO.3 and SEQ ID NO.4.Pass through the first primer pair and/or the second primer pair, in conjunction with Distinctive enzyme combined system in kit of the embodiment of the present invention detects high-risk HPV: HPV16 type and HPV18 type.
Specifically, it is searched by NCBI (National Center for Biotechnology Information) The HPV16 (NCBI Reference Sequence:NC_001526.4) and HPV18 (NCBI of GenBank (gene pool) Reference Sequence:NC_001357.1) complete genome sequence, according to the complete genome sequence design primer (primer Length~30bp, G/C content: 30-70%).The first primer designed to and the first primer pair and the present embodiment kit in it is special Some enzyme combined systems combine, can have to HPV16 the and HPV18DNA sequence that ncbi database is found high specificity, about The DNA cloning product of 130~200bp.
Specific primer sequence is as follows:
HPV16Primer Forward (SEQ ID NO.1):
5'-gtttcaggacccacaggagcgacccagaaa-3';
HPV16Primer Reverse (SEQ ID NO.2):
5'-aacataacgacaagattacaacaaggtagt-3';
HPV18Primer Forward (SEQ ID NO.3):
5'-atccaacacggcgaccctacaagctacctg-3';
HPV18Primer Reverse (SEQ ID NO.4):
5’-ccgtggaataattatttaacatattgggtc-3’。
Further, in kit provided in an embodiment of the present invention, the amino acid sequence of the Uvs X such as SEQ ID Shown in NO.5;It is specific as follows:
> sp | P04529 | UVSX_BPT4Recombination and repair protein OS= Enterobacteria phage T4OX=10665GN=UVSX PE=1SV=2
MSDLKSRLIKASTSKLTAELTASKFFNEKDVVRTKIPMMNIALSGEITGGMQSGLLILAGPSKSFKSNFGLTMVSSY MRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKET EDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTYETQEMFSKTVMGGGTGPMYSADTVFIIGKRQIKD GSDLQGYQFVLNVEKSRTVKEKSKFFIDVKFDGGIDPYSGLLDMALELGFVVKPKNGWYAREFLDEETGEMIREEKS WRAKDTNCTTFWGPLFKHQPFRDAIKRAYQLGAIDSNEIVEAEVDELINSKVEKFKSPESKSKSAADLETDLEQLSD MEEFNE。
The amino acid sequence of the Uvs Y is specific as follows as shown in SEQ ID NO.6:
> sp | P04537 | UVSY_BPT4Recombination protein uvsY OS=Enterobacteria Phage T4OX=10665GN=uvsY PE=1SV=3
MRLEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARLDYYSGRGDGDEFSMDR YEKSEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAFEAGK。
The amino acid sequence of the SSB is specific as follows as shown in SEQ ID NO.7:
> sp | P0AGE0 | SSB_ECOLI Single-stranded DNA-binding protein OS= Escherichia coli (strain K12) OX=83333GN=ssb PE=1SV=2
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQ VYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQS RPQQSAPAAPSNEPPMDFDDDIPF。
The amino acid sequence of the archaeal dna polymerase is specific as follows as shown in SEQ ID NO.8:
> sp | P52026 | DPO1_GEOSE DNA polymerase I OS=Geobacillus Stearothermophilus OX=1422GN=polA PE=1SV=2
MKNKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHILVAFDAGKTTFRHETFQDYKGGR QQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTMAARAEREGFAVKVISGDRDLTQLASPQVTVEITKKGI TDIESYTPETVVEKYGLTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLR QYRDLALLSKQLAAICRDAPVELTLDDIVYKGEDREKVVALFQELGFQSFLDKMAVQTDEGEKPLAGMDFAIADSVT DEMLADKAALVVEVVGDNYHHAPIVGIALANERGRFFLRPETALADPKFLAWLGDETKKKTMFDSKRAAVALKWKGI ELRGVVFDLLLAAYLLDPAQAAGDVAAVAKMHQYEAVRSDEAVYGKGAKRTVPDEPTLAEHLVRKAAAIWALEEPLM DELRRNEQDRLLTELEQPLAGILANMEFTGVKVDTKRLEQMGAELTEQLQAVERRIYELAGQEFNINSPKQLGTVLF DKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVEHILHYRQLGKLQSTYIEGLLKVVHPVTGKVHTMFNQALTQTGRL SSVEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIELRVLAHIAEDDNLIEAFRRGLDIHTKTAMDIFHVS EEDVTANMRRQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLHRR RYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMIDLSVRLREERLQARLLLQVHDELILEAPKEEIERLCRL VPEVMEQAVTLRVPLKVDYHYGPTWYDAK。
Further, in kit provided in an embodiment of the present invention, the kit includes amplification buffer (Amplification buffer), the pH=7-10 of the amplification buffer then connect nucleic acid base in DNA if pH is lower than 7 Chemical bond can hydrolyze;If pH is greater than 10, then forming double-stranded dinucleotides key can be destroyed, therefore, in pH=7- In the range of 10, it can stablize and carry out HPV amplification.It is highly preferred that when pH=8.8, the optimal stability of entire HPV amplified reaction.
Further, the amplification buffer contains: Tris-HCl, (NH4)2SO4、KCl、MgSO420。 In mentioned component, Tris-HCl can maintain the pH of amplification buffer to stablize;KCl can be by stablizing primer and DNA profiling knot It closes, K+Its net negative charge can be reduced in conjunction with negatively charged phosphate group, so that negatively charged primer will not be with Template is repelled;And MgCl2As a kind of stabilizer of a kind of confactor and primer in conjunction with DNA profiling;(NH4)2SO4 The mispairing of primer and DNA profiling can be prevented, and in different temperature and MgCl2Under concentration conditions, contain (NH4)2SO4's Amplified reaction is all very stable, reaction temperature adjustable in this way and MgCl2Concentration, so as to preferably optimized expansion system;20 be a kind of nonionic detergent, can not only stablize the activity of enzyme, can also inhibit the formation of secondary structure, from And provide amplification efficiency.Therefore, the above-mentioned amplification buffer in the kit of the embodiment of the present invention, by ingredient therein into Row adjusts proportion, and the amplification system of available suitable constant-temperature amplification HPV finally makes the kit of the embodiment of the present invention can With it is accurate, efficient detect HPV, and reduce the interference of other DNA/ background signals, to improve detection time, significantly reduce Testing cost.Specifically, for the length of target HPV, the concentration of DNA, activity of required various enzymes etc. factor can be into Row optimization obtains suitable amplification buffer.
Preferably, in embodiments of the present invention, for the detection of target HPV16 and HPV18, the amplification of the embodiment of the present invention The pH=8.8 of buffer, and the amplification buffer contains: (the NH of Tris-HCl, 10mM of 20mM4)2SO4, 50mM KCl, The MgSO of 2mM4With 0.1% (mass percentage)20.Amplification buffer under this condition can be better suited for Detection to target HPV16 and HPV18.
Further, in kit provided in an embodiment of the present invention, the kit further includes positive controls, and institute It states positive controls and contains the positive control primers as shown in SEQ ID NO.9 and SEQ ID NO.10.The positive control primers HPV16 type and HPV18 type can be expanded simultaneously, and particular sequence is as follows:
SEQ ID NO.9:5 '-catagaaataacctgtgtatattgcaagac-3 ';
SEQ ID NO.10:5 '-cacagattcaaaaagacgacctaagttgcc-3 '.
Further, in kit provided in an embodiment of the present invention, the kit is under 37-40 DEG C of amplification condition HPV is detected.It is highly preferred that the time of the kit detection HPV is 10-20min.
The present invention successively carried out test of many times, and it is further detailed as reference pair invention progress now to lift A partial experiment result Thin description, is described in detail combined with specific embodiments below.
Embodiment 1 is used to detect the kit of HPV
A kind of kit based on the high quick amplification detection HPV of recombination, comprising:
For expanding the first primer of HPV16 to (SEQ ID NO.1 and SEQ ID NO.2) and for expanding HPV18's Second primer pair (SEQ ID NO.3 and SEQ ID NO.4);Uvs X(SEQ ID NO.5),Uvs Y(SEQ ID NO.6), SSB (SEQ ID NO.7) and archaeal dna polymerase (SEQ ID NO.8);And amplification buffer: 20mM Tris-HCl, 10mM (NH4)2SO4、50mM KCl、2mM MgSO4With 0.1%20 (pH=8.8).
Embodiment 2DNA extracts (extraction)
The extraction for detecting DNA in sample, includes the following steps:
1. 1ml extraction buffer (100mM is added in cervical tissue (Cervical tissue) cell Tris-HCl, pH=8.0;50mM EDTA, pH=8.0;500mM NaCl ,+0.07% mercaptoethanol), it is sufficiently mixed.
2. 130ul 10%SDS is added, and a small amount of breaks down proteins Enzyme K, shaken several times are inverted, 65 DEG C of water baths are placed in Middle water-bath 1 hour.
3. being added 300ul 5M potassium acetate (potassium acetate), sufficiently mixes, is subsequently placed in 30 minutes on ice, In favor of protein precipitation.
4.12000rpm is centrifuged 30 minutes, is taken out supernatant and is moved on in new centrifuge tube (eppendorf tube).
5. isopropanol two volumes are added, 12000rpm is centrifuged 30 minutes.
6. outwelling supernatant, 70% ethyl alcohol is added, 12000rpm is centrifuged 30 minutes.
7. outwell supernatant, as being air-dried at room temperature, 30 minutes.
8. 50ul distilled water (distilled water) dissolving DNA is added, it is stored in minus 20 degrees.
Using the above method, according to the Infection Status of cervical tissue cell: HPV16 infection, is not felt by HPV HPV18 infection Dye extracts three DNA samples: i.e. HPV16-positive (HPV16 infects DNA sample), HPV18-positive respectively (HPV18 infects DNA sample) and HPV-negative samples (negative control DNA sample).
Embodiment 3HPV detection
Extraction in kit and embodiment 2 in embodiment 1 is obtained into DNA sample according to the ratio in following table 1, is added Enter into microtest tube (final volume are as follows: 50ul), homogeneous rocks 300rpm and reacts 10-20 minutes in the environment of 37-40 DEG C.
Table 1
To after reaction, reaction product be carried out electrophoresis, the primer size of interpretation DNA in 3~4% agar glue (tracking stain being wherein added, compare electrophoresis with control group, and be put into DNA marker and be compared), by attaching plug The positions of positive and negative anodes (pay attention to) is connected to power supply, and in electrophoresis process, negatively charged DNA molecular can shift to anode by cathode, It is run glue about 10 minutes in 100vol.It wears gloves to be placed on strong UV transmitted light source plate agar glue, can take pictures to result deposit, most Whole result figure is as shown in Figure 1.As can be seen from Figure 1: the kit of the present embodiment has the detection of HPV16 and HPV18 good Sensitivity and specificity.
The foregoing is merely illustrative of the preferred embodiments of the present invention, is not intended to limit the invention, all in essence of the invention Made any modifications, equivalent replacements, and improvements etc., should all be included in the protection scope of the present invention within mind and principle.
Sequence table
<110>Shenzhen Xin Si microorganism Science and Technology Ltd.
<120>for detecting the kit of HPV
<160> 10
<170> SIPOSequenceListing 1.0
<210> 1
<211> 30
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 1
gtttcaggac ccacaggagc gacccagaaa 30
<210> 2
<211> 30
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 2
aacataacga caagattaca acaaggtagt 30
<210> 3
<211> 30
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 3
atccaacacg gcgaccctac aagctacctg 30
<210> 4
<211> 30
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ccgtggaata attatttaac atattgggtc 30
<210> 5
<211> 391
<212> PRT
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Gly Gly Met Gln Ser Gly Leu Leu Ile Leu Ala Gly Pro Ser Lys Ser
50 55 60
Phe Lys Ser Asn Phe Gly Leu Thr Met Val Ser Ser Tyr Met Arg Gln
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Tyr Pro Asp Ala Val Cys Leu Phe Tyr Asp Ser Glu Phe Gly Ile Thr
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Pro Ala Tyr Leu Arg Ser Met Gly Val Asp Pro Glu Arg Val Ile His
100 105 110
Thr Pro Val Gln Ser Leu Glu Gln Leu Arg Ile Asp Met Val Asn Gln
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Leu Asp Ala Ile Glu Arg Gly Glu Lys Val Val Val Phe Ile Asp Ser
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Leu Gly Asn Leu Ala Ser Lys Lys Glu Thr Glu Asp Ala Leu Asn Glu
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Lys Val Val Ser Asp Met Thr Arg Ala Lys Thr Met Lys Ser Leu Phe
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Arg Ile Val Thr Pro Tyr Phe Ser Thr Lys Asn Ile Pro Cys Ile Ala
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Ile Asn His Thr Tyr Glu Thr Gln Glu Met Phe Ser Lys Thr Val Met
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Gly Gly Gly Thr Gly Pro Met Tyr Ser Ala Asp Thr Val Phe Ile Ile
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Gly Lys Arg Gln Ile Lys Asp Gly Ser Asp Leu Gln Gly Tyr Gln Phe
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Val Leu Asn Val Glu Lys Ser Arg Thr Val Lys Glu Lys Ser Lys Phe
245 250 255
Phe Ile Asp Val Lys Phe Asp Gly Gly Ile Asp Pro Tyr Ser Gly Leu
260 265 270
Leu Asp Met Ala Leu Glu Leu Gly Phe Val Val Lys Pro Lys Asn Gly
275 280 285
Trp Tyr Ala Arg Glu Phe Leu Asp Glu Glu Thr Gly Glu Met Ile Arg
290 295 300
Glu Glu Lys Ser Trp Arg Ala Lys Asp Thr Asn Cys Thr Thr Phe Trp
305 310 315 320
Gly Pro Leu Phe Lys His Gln Pro Phe Arg Asp Ala Ile Lys Arg Ala
325 330 335
Tyr Gln Leu Gly Ala Ile Asp Ser Asn Glu Ile Val Glu Ala Glu Val
340 345 350
Asp Glu Leu Ile Asn Ser Lys Val Glu Lys Phe Lys Ser Pro Glu Ser
355 360 365
Lys Ser Lys Ser Ala Ala Asp Leu Glu Thr Asp Leu Glu Gln Leu Ser
370 375 380
Asp Met Glu Glu Phe Asn Glu
385 390
<210> 6
<211> 137
<212> PRT
<213>artificial sequence (Artificial Sequence)
<400> 6
Met Arg Leu Glu Asp Leu Gln Glu Glu Leu Lys Lys Asp Val Phe Ile
1 5 10 15
Asp Ser Thr Lys Leu Gln Tyr Glu Ala Ala Asn Asn Val Met Leu Tyr
20 25 30
Ser Lys Trp Leu Asn Lys His Ser Ser Ile Lys Lys Glu Met Leu Arg
35 40 45
Ile Glu Ala Gln Lys Lys Val Ala Leu Lys Ala Arg Leu Asp Tyr Tyr
50 55 60
Ser Gly Arg Gly Asp Gly Asp Glu Phe Ser Met Asp Arg Tyr Glu Lys
65 70 75 80
Ser Glu Met Lys Thr Val Leu Ser Ala Asp Lys Asp Val Leu Lys Val
85 90 95
Asp Thr Ser Leu Gln Tyr Trp Gly Ile Leu Leu Asp Phe Cys Ser Gly
100 105 110
Ala Leu Asp Ala Ile Lys Ser Arg Gly Phe Ala Ile Lys His Ile Gln
115 120 125
Asp Met Arg Ala Phe Glu Ala Gly Lys
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<210> 7
<211> 178
<212> PRT
<213>artificial sequence (Artificial Sequence)
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Met Ala Ser Arg Gly Val Asn Lys Val Ile Leu Val Gly Asn Leu Gly
1 5 10 15
Gln Asp Pro Glu Val Arg Tyr Met Pro Asn Gly Gly Ala Val Ala Asn
20 25 30
Ile Thr Leu Ala Thr Ser Glu Ser Trp Arg Asp Lys Ala Thr Gly Glu
35 40 45
Met Lys Glu Gln Thr Glu Trp His Arg Val Val Leu Phe Gly Lys Leu
50 55 60
Ala Glu Val Ala Ser Glu Tyr Leu Arg Lys Gly Ser Gln Val Tyr Ile
65 70 75 80
Glu Gly Gln Leu Arg Thr Arg Lys Trp Thr Asp Gln Ser Gly Gln Asp
85 90 95
Arg Tyr Thr Thr Glu Val Val Val Asn Val Gly Gly Thr Met Gln Met
100 105 110
Leu Gly Gly Arg Gln Gly Gly Gly Ala Pro Ala Gly Gly Asn Ile Gly
115 120 125
Gly Gly Gln Pro Gln Gly Gly Trp Gly Gln Pro Gln Gln Pro Gln Gly
130 135 140
Gly Asn Gln Phe Ser Gly Gly Ala Gln Ser Arg Pro Gln Gln Ser Ala
145 150 155 160
Pro Ala Ala Pro Ser Asn Glu Pro Pro Met Asp Phe Asp Asp Asp Ile
165 170 175
Pro Phe
<210> 8
<211> 876
<212> PRT
<213>artificial sequence (Artificial Sequence)
<400> 8
Met Lys Asn Lys Leu Val Leu Ile Asp Gly Asn Ser Val Ala Tyr Arg
1 5 10 15
Ala Phe Phe Ala Leu Pro Leu Leu His Asn Asp Lys Gly Ile His Thr
20 25 30
Asn Ala Val Tyr Gly Phe Thr Met Met Leu Asn Lys Ile Leu Ala Glu
35 40 45
Glu Gln Pro Thr His Ile Leu Val Ala Phe Asp Ala Gly Lys Thr Thr
50 55 60
Phe Arg His Glu Thr Phe Gln Asp Tyr Lys Gly Gly Arg Gln Gln Thr
65 70 75 80
Pro Pro Glu Leu Ser Glu Gln Phe Pro Leu Leu Arg Glu Leu Leu Lys
85 90 95
Ala Tyr Arg Ile Pro Ala Tyr Glu Leu Asp His Tyr Glu Ala Asp Asp
100 105 110
Ile Ile Gly Thr Met Ala Ala Arg Ala Glu Arg Glu Gly Phe Ala Val
115 120 125
Lys Val Ile Ser Gly Asp Arg Asp Leu Thr Gln Leu Ala Ser Pro Gln
130 135 140
Val Thr Val Glu Ile Thr Lys Lys Gly Ile Thr Asp Ile Glu Ser Tyr
145 150 155 160
Thr Pro Glu Thr Val Val Glu Lys Tyr Gly Leu Thr Pro Glu Gln Ile
165 170 175
Val Asp Leu Lys Gly Leu Met Gly Asp Lys Ser Asp Asn Ile Pro Gly
180 185 190
Val Pro Gly Ile Gly Glu Lys Thr Ala Val Lys Leu Leu Lys Gln Phe
195 200 205
Gly Thr Val Glu Asn Val Leu Ala Ser Ile Asp Glu Ile Lys Gly Glu
210 215 220
Lys Leu Lys Glu Asn Leu Arg Gln Tyr Arg Asp Leu Ala Leu Leu Ser
225 230 235 240
Lys Gln Leu Ala Ala Ile Cys Arg Asp Ala Pro Val Glu Leu Thr Leu
245 250 255
Asp Asp Ile Val Tyr Lys Gly Glu Asp Arg Glu Lys Val Val Ala Leu
260 265 270
Phe Gln Glu Leu Gly Phe Gln Ser Phe Leu Asp Lys Met Ala Val Gln
275 280 285
Thr Asp Glu Gly Glu Lys Pro Leu Ala Gly Met Asp Phe Ala Ile Ala
290 295 300
Asp Ser Val Thr Asp Glu Met Leu Ala Asp Lys Ala Ala Leu Val Val
305 310 315 320
Glu Val Val Gly Asp Asn Tyr His His Ala Pro Ile Val Gly Ile Ala
325 330 335
Leu Ala Asn Glu Arg Gly Arg Phe Phe Leu Arg Pro Glu Thr Ala Leu
340 345 350
Ala Asp Pro Lys Phe Leu Ala Trp Leu Gly Asp Glu Thr Lys Lys Lys
355 360 365
Thr Met Phe Asp Ser Lys Arg Ala Ala Val Ala Leu Lys Trp Lys Gly
370 375 380
Ile Glu Leu Arg Gly Val Val Phe Asp Leu Leu Leu Ala Ala Tyr Leu
385 390 395 400
Leu Asp Pro Ala Gln Ala Ala Gly Asp Val Ala Ala Val Ala Lys Met
405 410 415
His Gln Tyr Glu Ala Val Arg Ser Asp Glu Ala Val Tyr Gly Lys Gly
420 425 430
Ala Lys Arg Thr Val Pro Asp Glu Pro Thr Leu Ala Glu His Leu Val
435 440 445
Arg Lys Ala Ala Ala Ile Trp Ala Leu Glu Glu Pro Leu Met Asp Glu
450 455 460
Leu Arg Arg Asn Glu Gln Asp Arg Leu Leu Thr Glu Leu Glu Gln Pro
465 470 475 480
Leu Ala Gly Ile Leu Ala Asn Met Glu Phe Thr Gly Val Lys Val Asp
485 490 495
Thr Lys Arg Leu Glu Gln Met Gly Ala Glu Leu Thr Glu Gln Leu Gln
500 505 510
Ala Val Glu Arg Arg Ile Tyr Glu Leu Ala Gly Gln Glu Phe Asn Ile
515 520 525
Asn Ser Pro Lys Gln Leu Gly Thr Val Leu Phe Asp Lys Leu Gln Leu
530 535 540
Pro Val Leu Lys Lys Thr Lys Thr Gly Tyr Ser Thr Ser Ala Asp Val
545 550 555 560
Leu Glu Lys Leu Ala Pro His His Glu Ile Val Glu His Ile Leu His
565 570 575
Tyr Arg Gln Leu Gly Lys Leu Gln Ser Thr Tyr Ile Glu Gly Leu Leu
580 585 590
Lys Val Val His Pro Val Thr Gly Lys Val His Thr Met Phe Asn Gln
595 600 605
Ala Leu Thr Gln Thr Gly Arg Leu Ser Ser Val Glu Pro Asn Leu Gln
610 615 620
Asn Ile Pro Ile Arg Leu Glu Glu Gly Arg Lys Ile Arg Gln Ala Phe
625 630 635 640
Val Pro Ser Glu Pro Asp Trp Leu Ile Phe Ala Ala Asp Tyr Ser Gln
645 650 655
Ile Glu Leu Arg Val Leu Ala His Ile Ala Glu Asp Asp Asn Leu Ile
660 665 670
Glu Ala Phe Arg Arg Gly Leu Asp Ile His Thr Lys Thr Ala Met Asp
675 680 685
Ile Phe His Val Ser Glu Glu Asp Val Thr Ala Asn Met Arg Arg Gln
690 695 700
Ala Lys Ala Val Asn Phe Gly Ile Val Tyr Gly Ile Ser Asp Tyr Gly
705 710 715 720
Leu Ala Gln Asn Leu Asn Ile Thr Arg Lys Glu Ala Ala Glu Phe Ile
725 730 735
Glu Arg Tyr Phe Ala Ser Phe Pro Gly Val Lys Gln Tyr Met Asp Asn
740 745 750
Ile Val Gln Glu Ala Lys Gln Lys Gly Tyr Val Thr Thr Leu Leu His
755 760 765
Arg Arg Arg Tyr Leu Pro Asp Ile Thr Ser Arg Asn Phe Asn Val Arg
770 775 780
Ser Phe Ala Glu Arg Thr Ala Met Asn Thr Pro Ile Gln Gly Ser Ala
785 790 795 800
Ala Asp Ile Ile Lys Lys Ala Met Ile Asp Leu Ser Val Arg Leu Arg
805 810 815
Glu Glu Arg Leu Gln Ala Arg Leu Leu Leu Gln Val His Asp Glu Leu
820 825 830
Ile Leu Glu Ala Pro Lys Glu Glu Ile Glu Arg Leu Cys Arg Leu Val
835 840 845
Pro Glu Val Met Glu Gln Ala Val Thr Leu Arg Val Pro Leu Lys Val
850 855 860
Asp Tyr His Tyr Gly Pro Thr Trp Tyr Asp Ala Lys
865 870 875
<210> 9
<211> 30
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 9
catagaaata acctgtgtat attgcaagac 30
<210> 10
<211> 30
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 10
cacagattca aaaagacgac ctaagttgcc 30

Claims (10)

1. a kind of for detecting the kit of HPV, which is characterized in that the kit includes the primer for expanding HPV, and Uvs X, Uvs Y, SSB and archaeal dna polymerase.
2. kit as described in claim 1, which is characterized in that described for expand the primer of HPV to include for expanding The first primer pair of HPV16, and the nucleotide sequence of the first primer pair is as shown in SEQ ID NO.1 and SEQ ID NO.2; And/or
The primer for expanding HPV includes the second primer pair for expanding HPV18, and the nucleosides of second primer pair Acid sequence is as shown in SEQ ID NO.3 and SEQ ID NO.4.
3. kit as described in claim 1, which is characterized in that the amino acid sequence of the Uvs X such as SEQ ID NO.5 institute Show;And/or
The amino acid sequence of the Uvs Y is as shown in SEQ ID NO.6.
4. kit as described in claim 1, which is characterized in that the amino acid sequence of the SSB such as SEQ ID NO.7 institute Show;And/or
The amino acid sequence of the archaeal dna polymerase is as shown in SEQ ID NO.8.
5. kit as described in claim 1, which is characterized in that the kit includes amplification buffer, and the amplification Buffer contains: Tris-HCl, (NH4)2SO4、KCl、MgSO420。
6. kit as claimed in claim 5, which is characterized in that the pH=7-10 of the amplification buffer.
7. kit as claimed in claim 5, which is characterized in that the amplification buffer contains: the Tris-HCl of 20mM, (the NH of 10mM4)2SO4, 50mM KCl, 2mM MgSO4With 0.1%20。
8. kit as claimed in claim 2, which is characterized in that the kit further includes positive controls, and the sun Property control group contains the positive control primers as shown in SEQ ID NO.9 and SEQ ID NO.10.
9. such as the described in any item kits of claim 1-8, which is characterized in that amplification item of the kit at 37-40 DEG C HPV is detected under part.
10. kit as claimed in claim 9, which is characterized in that the time of the kit detection HPV is 10-20min.
CN201810971577.5A 2018-08-24 2018-08-24 For detecting the kit of HPV Pending CN109055611A (en)

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WO2024050998A1 (en) * 2022-09-05 2024-03-14 深圳市研元生物科技有限公司 Nucleic acid detection reagent for rapidly detecting pathogen of pets, and kit and use thereof
CN115820597A (en) * 2022-12-08 2023-03-21 深度进化(广州)生物技术有限公司 Preparation method of modified molecular enzyme and molecular immunochromatography detection method thereof
WO2024153215A1 (en) * 2023-01-19 2024-07-25 南京金斯瑞生物科技有限公司 Single-stranded dna molecular weight marker and preparation method therefor

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