CN106755046A - A kind of method for transforming bacillus gene group - Google Patents

A kind of method for transforming bacillus gene group Download PDF

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CN106755046A
CN106755046A CN201611081187.8A CN201611081187A CN106755046A CN 106755046 A CN106755046 A CN 106755046A CN 201611081187 A CN201611081187 A CN 201611081187A CN 106755046 A CN106755046 A CN 106755046A
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bacterial strain
fragment
pbts
bacillus
bacterium
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CN106755046B (en
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任钧
唐旭
曹镜
雷蕾
樊超
柴进凯
曹富明
孙楠
范佳
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Chengdu Mei Yide Bioisystech Co Ltd
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Abstract

The invention belongs to biological technical field, and in particular to a kind of method of transformation bacillus gene group.The present invention has wide adaptability, and (plasmid conversion difficulty is low,PBTS plasmids can be replicated in various gram-positive bacterias,Transform the genome of various bacterium),Can (recombinant plasmid has two homologous recombination fragments with the same bacterial strain of repeated multiple times transformation,There is homologous recombination twice successively,Wild type may be returned to after second homologous recombination,Can also obtain transforming bacterial strain,But the fragment that any influence continues to transform is not remained,Such as resistance marker,Plasmid replication element etc.),And can transform influences larger gene (to introduce cre recombinases and second resistance marker system on bacterial growth,The transformation bacterial strain for obtaining can be for the second time recombinated by resistance screening,Kill the wild-type strain of survival ability is strong,Cre recombinases are expressed afterwards,Cut away second resistance marker,The fragment of residual is not interfered with to be transformed bacterial strain again).

Description

A kind of method for transforming bacillus gene group
Technical field
The invention belongs to biological technical field, and in particular to a kind of method of transformation bacillus gene group.
Background technology
Protein expression techniques are one of core technologies of modern biology, and expressing protein cannot be only used for biological study, Commercialized protein product, such as recombinant vaccine, Recombulin, cell factor product can also be provided.The table commonly used at present There are Escherichia coli, yeast, insect cell and mammalian cell etc. up to system, but they all respectively have obvious advantage and disadvantage.Greatly The research of enterobacteria expression system most fully, there is a multiple choices, the pET expression systems of most commonly Novagen, and it utilizes phagocytosis The t7 rna polymerase of body can in specific manner transcribe the genes of interest after T7 promoters.At optimum conditions, destination protein can reach To more than the 50% of e. coli total protein.Although having expression efficiency high, the low advantage of toxigenic capacity, shortcoming is also very Substantially:Albumen easily forms inclusion body, renaturation difficulty and relatively costly;Escherichia coli can not carry out glycosylation modified to albumen; Cell membrane contains lipopolysaccharides (endotoxin), is difficult to remove completely.Another conventional expression system is yeast expression system, its It is high with expression quantity, can induce, PE is easy to purifying to extracellular, and excellent with certain posttranslational modification ability etc. Point, but a disadvantage is that part expression product is degradable, expression quantity is uncontrollable, and the albumen more than 30KDa can hardly be secreted.Animal The characteristics of cell and insect cell expression system is that, with complete modification system, expression product has or similar natural work Property, there is no contaminated with endotoxins, but expression quantity is low, and the cycle is long, and technical requirements are high, and production cost is high.
Bacillus subtilis is a kind of gram-positive bacteria being widely present in water body, air, soil, and it can be in ring Spore, spore are produced when border is unfavorable can resist the extreme environments such as high temperature, arid, and being sprouted again when environment is suitable is carried out Nutrient growth.The secretion capacity of bacillus subtilis is strong, and when high density fermentation is carried out, protein secretion can reach 20- 25g/L.The products such as protease, amylase, inosine, the riboside of its fermenting and producing, already into our day Often life.Because it has biological safety, by FDA judging panel's GRAS class additives, the probiotics of its production and using its production Fermented product be widely used to medicine and aquaculture in.
Last century the eighties begin to carry out protein expression using bacillus subtilis, and its expression product not only includes thin The various enzymes in bacterium source, such as amylase, protease, endo-dextranase, lipase, also including hEGF, IFN-alpha 2, The albumen of the separate sources such as Proinsulin, Streptavidin, cathelicidin-BF.Using dividing for bacillus subtilis Approach is secreted, expressing protein can be secreted into zymotic fluid, significantly reduce the difficulty that the later stage isolates and purifies.Bacillus subtilis Belong to gram-positive bacteria, do not contain lipopolysaccharides, be easy to produce injection medicine.The nutritional requirement of bacillus subtilis is simple, Produced because it has been carried out technical scale metaplasia, large-scale culture technical difficulty is low, and toxigenic capacity is low.At present, bacillus subtilis Multiple kind in multiple bacterial strains and bacillus in bacterium all has been completed that gene order-checking works, and genetic background understands, It is safe, also allow for carrying out genome manipulation.But bacillus subtilis expression system is not a wide variety of table Up to system, also many shortcomings are to be overcome.
The wild-type strain of the bacterium of pattern bacterium 168 of bacillus subtilis has been lost, and the bacterial strain being currently available all is Its mutant.Although it is satisfied with the requirement of scientific research, its PE ability, is auxotrophic mutations Characteristic, can not meet the requirement for setting up commercialization expression system.The conversion system set up at present is all based on type strain 168 Set up, although the bacterial strain in wild type source and the bacillus subtilis strain of production application are very more, are difficult conversion and all hinder The further transformation to these bacterial strains is hindered.The plasmid in bacillus subtilis source is also nearly all stealthy plasmid, is difficult to build Carrier;All it is rolling-circle replication property grain from the plasmid majority of other gram-positive bacterias, is replicated in bacillus subtilis Unstable, easy to lose, copy number is less;These characteristics all limit possibility directly using plasmid construction stabilization expression system Property.Bacillus subtilis has four kinds of secretory pathways, Sec approach, Tat approach, Com systems and abc transport approach, research at present compared with Sec approach is clear that, some expression systems also utilize Sec approach secreting, expressing albumen.But Sec approach has regulation and control machine System, can suppress the PE of incorrect folding, and foreign protein is typically folded relatively slowly, and folding process needs the ginseng of chaperone With easily degraded by Sec secretory pathways.Bacillus subtilis can also secrete up to eight kinds protease in zymotic fluid, and its is same Can be degraded the destination protein of expression.
Overcoming the effective way of disadvantages mentioned above is:Plasmid is not used as genes of interest and the carrier of expression system element, Directly by genes of interest and expression system element insertion Bacillus subtilis genes group;Its genome is transformed, is knocked out Some suppress or influence the gene of PE.The method of current transformed bacillus bacillus gene group has two kinds, the first It is directly to convert double chain DNA fragment into cell while carrying out homologous recombination, it is high to transformation efficiency requirement, is currently only used for 168 pattern bacterium.Second is to utilize temperature-sensitive plasmid, and temperature-sensitive plasmid of the conversion with homologous recombination fragment enters thin Born of the same parents, then cultivate under restrictive temperature, there occurs the bacterium of restructuring and the bacterium of homologous recombination can not occur due to matter by screening Grain is lost, it is impossible to by screening.The conversion of the method and reconstitution steps are separated, and reduce the requirement to transformation efficiency.Can select The temperature-sensitive plasmid selected is pE194, but the plasmid is a plasmid that can only be replicated in gram-positive bacteria, it is impossible to Replicated in Escherichia coli, i.e., can not quickly be carried out plasmid construction work using Escherichia coli.One of solution is structure The fusion plasmid of fusion plasmid, i.e. pE194 and pBR322 is built, the plasmid possesses two sets of dubbing systems, and difference can be in withered grass bud Replicated in spore bacillus and Escherichia coli.But stability is poor when the plasmid is replicated in Escherichia coli, if polyclonal When site insertion is less than the fragment of 1.5k, plasmid can stablize duplication;If Insert Fragment be more than 2k, the plasmid replicate when just The phenomenon of fragment loss can occur.Another conventional temperature-sensitive plasmid is pKS1, and the plasmid is host range plasmid more than, can Replicated with most gram-positive bacterias and negative bacterium, but the plasmid stability is poor, and copy number is relatively low.Document (Rational Design of a Plasmid Origin That Replicates Efficiently in Both Gram-Positive and Gram-Negative Bacteria, 2010) the original plasmid pWV01 of pKS1 is transformed, Its stability and copy number in Escherichia coli is increased, vector construction is convenient for.But not to transformation plasmid in text The temperature-sensing property of pBAV1K is studied, and temperature of the pBAV1K-T5-GFP in bacillus subtilis is found in our work Degree sensitive copy characteristic is still present, but restricted cultivation temperature is increased to 45 DEG C from 37 DEG C of pKS1.According to pBAV1K- These characteristics of T5-GFP plasmids, the method that a set of transformed bacillus bacillus gene group can be developed.
The content of the invention
In order to solve the above technical problems, the present invention provides a kind of method for transforming bacillus gene group, using many places Main high copy number plasmid pBAV1K stability in Escherichia coli is high, and copy number is more, it is easy to the characteristic of transformation and in bacillus Temperature sensitive copy characteristic, the method for constructing a set of transformed bacillus bacillus gene group, with wide adaptability, transformation Plasmid is easy to conversion, can be replicated in various bacillus, transforms various bacillus;Can repeat to transform same bacterium Strain, the fragment of influence transformation next time such as resistance, reproduction element is not remained every time after transformation;Can also transform influences on strain growth Larger gene, introduces cre recombinases and the second resistance screening mark.
The method for solving a kind of transformation bacillus gene group in the present invention of above technical problem, it is characterised in that: Comprise the following steps:
(1) EcoR I and the Apa I site in pBAV1K-T5-GFP plasmids insert MCS (MCS) fragment, and By same sense mutation, NdeI restriction enzyme sites therein are deleted, obtain plasmid pBTS.
PBTS plasmids can be replicated in various gram-positive bacterias, transform the genome of various bacterium.
(2) restriction enzyme site in the left end in MCS sites inserts the homologous recombination fragment A of 500-800bp, right side restriction enzyme site The homologous recombination fragment B of 500-800bp is inserted, middle insertion mutation fragment or purpose fragment or any fragment is not inserted into, both The fragment of transformation is needed between two homologous recombination regions, plasmid pBTS-X is obtained.
Here left end and the restriction enzyme site of right-hand member can be any restriction enzyme site, it is only necessary to ensure A before B just; A, B represent two sections of sequences respectively, specifically may refer to Technology Roadmap, and A, B are any two sections of sequences;Mutant fragments, purpose piece Section can be any fragment, or you think the fragment of transformation, are only represented with X here, referring specifically to Technology Roadmap or implementation Example.
(3) pBTS-X is transferred in bacillus by electricity conversion, obtains positive transformants bacterial strain;
(4) into being cultivated in fluid nutrient medium, cultivation temperature is 45 DEG C to picking positive transformants bacterium colony, and incubation time is big In 24h.
(5) bacterium solution 100ul -500ul, is applied on the flat board containing kanamycins in taking 4, and cultivation temperature is 45 DEG C, is entered Row incubated overnight.
(6) bacterium colony in picking 5 is into being cultivated in fluid nutrient medium, every 8-16h passages once, until screening Nonreactive bacterial strain.I.e. same bacterial strain, does not grow on containing resistant flat board, is grown on the flat board of nonreactive.
(7) take the bacterium solution in 6 and be diluted coated plate, dilution 105-106Times, incubated overnight.
(8) bacterium colony in picking 7 carries out Resistance Identification, until obtaining 5-10 plants of nonreactive bacterial strain.
(9) nonreactive bacterial strain taken in 8 is inoculated into fluid nutrient medium, incubated overnight, extracts bacterial genomes, enters performing PCR Identification;Positive strain proceeds sequencing identification, and sequencing identification result is the bacterial strain for completing genome manipulation for positive strain.
In the step (3) bacillus be bacillus subtilis 168, Z12 bacterial strains, also including other bacillus, such as Bacillus amyloliquefaciens (Bacillus amyloliquefaciens), bacillus pumilus (Bacillus pumilus), The bacterial strains such as clothing bacillus (Bacillus licheniformis), or other pBTS plasmids have temperature sensitive copy characteristic Gram-positive bacteria.
The gram-positive bacteria is streptococcus pneumonia (Streptococcus pneumoniae), Lactococcus lactis (Lactococcus lactis) or series bacillus (Paenibacillus sp) bacterial strain.
The pBTS nucleotide sequences are as shown in SEQ ID NO.1.
For in 6-9 steps in the present invention, second restructuring can obtain wild-type strain and transformation bacterial strain, if wild The growth ability of type bacterial strain is better than transformation bacterial strain, is difficult to screen the situation of transformation bacterial strain, the strain improvement scheme of design optimization, Step is as follows:
(1) the MCS sites left-hand end in pBTS inserts the homologous recombination fragment A of 500-800bp, right-hand end insertion 500- The homologous recombination fragment B of 800bp, middle insertion mutation fragment or purpose fragment or is not inserted into fragment, then in the transformation of B with centre Insertion has blasticidin resistance fragment between fragment or A and the transformation fragment of centre, and blasticidin resistance fragment two ends contain There are lox71 the and lox72 fragments that cre recombinases are recognized, the plasmid is named as pBTS-X-Z.Resistance fragments herein are not limited only to Blasticidin resistance fragment, also resistance fragments such as including similar tetracycline, chloramphenicol, spectinomycin.
(2) pBTS-X-Z plasmids are converted by electricity conversion and is entered in bacillus, bacillus herein includes withered grass The bacterial strains such as bacillus 168, Z12, also including other bacillus, such as bacillus amyloliquefaciens, bacillus pumilus, lichens bud The bacterial strains such as spore bacillus, such as gram-positive bacteria also including other pBTS plasmids with temperature sensitive copy characteristic, pneumonia streptococcus Bacterium (Streptococcus pneumoniae), Lactococcus lactis (Lactococcus lactis), series bacillus Bacterial strains such as (Paenibacillus sp.).
(3) into being cultivated in fluid nutrient medium, cultivation temperature is 45 DEG C to the positive transformants bacterium colony in picking (1), training The time of supporting is more than 24h.
(4) bacterium solution 100ul -500ul in (3) is taken, is applied on the flat board containing kanamycins or bleomycin, trained It is 45 DEG C, incubated overnight to support temperature.
(5) bacterium colony in picking (4) enters and is cultivated in the LB liquid medium containing blasticidin resistance, every 8- 16h is passed on once, the bacterium colony only until screening with bleomycin.
(6) take the bacterium solution in (5) and be diluted coated plate, flat board contains blasticidin resistance, dilution 105-106Times, overnight train Support.
(7) bacterium colony in picking (6) carries out Resistance Identification, only has blasticidin resistance until obtaining 3-5, without card The bacterial strain of that chloramphenicol resistance.
(8) monoclonal antibody inoculation in (7) is taken in culture medium, and incubated overnight extracts bacterial genomes, enters performing PCR mirror It is fixed.Positive strain proceeds sequencing identification, and the positive strain of sequencing identification enters next step.
(9) conversion pBTS-IC plasmids enter the monoclonal antibody bacterial strain that the positive is accredited as in (8), and IC is that lactose operator regulates and controls cre Recombinate the fragment of expression of enzymes, cre recombinases can characteristic identification lox71 and lox66 sites, recombinated, left in genome The loxP sites that can not be recognized by cre recombinases, the lower fragment of cutting contains the lox72 sites for easily recognizing.
(10) the positive transformants bacterial strain in picking (9), connects bacterium and is cultivated, using IPTG induced expressions or leakage expression Cre restructuring cleavage blasticidin resistance fragment.
(11) bacterium solution in (10) is taken, is inoculated into fluid nutrient medium, cultivation temperature is 45 DEG C, and incubation time is more than 24h.
(12) bacterium solution of culture in (11), dilution 10 are taken5-106To on the flat board of nonreactive, cultivation temperature is 45 DEG C, mistake to coated plate Night cultivates;
(13) single bacterium colony in (12) is taken, Resistance Identification is carried out, until screens 2-5 plants of nonreactive bacterial strain.
(14) nonreactive bacterial strain in (13) is taken, is inoculated into culture medium, incubated overnight extracts genome, enter performing PCR mirror It is fixed.Positive strain carries out sequencing identification again, and the bacterial strain for being still accredited as the positive is the bacterial strain for completing genome manipulation.
The pBTS-IC nucleotide sequences are as shown in SEQ ID NO.3.
The skeleton of pBTS plasmids is that stability is high, the pBAV1K plasmids more than copy number, multiple relative to other responsive to temperature type Plasmid processed, it has dubbing system element fragment short (comprise only a kind of dubbing system element and kalamycin resistance is marked), can Replicated with Escherichia coli and gram-positive bacteria, duplicate copy number is high, stability it is high (fragment of insertion 6K or so, The imagination of fragment loss will not also occur).
The method that the homologous recombination based on pBTS transforms bacterial genomes in the present invention, with wide adaptability, (plasmid is converted Difficulty is low, and pBTS plasmids can be replicated in various gram-positive bacterias), can be with the repeated multiple times same bacterial strain of transformation (weight Group plasmid has two homologous recombination fragments, and homologous recombination twice occurs successively, and open country may be returned to after second homologous recombination Raw type, it is also possible to obtain transforming bacterial strain, but do not remain the fragment that any influence continues to transform, such as resistance marker, plasmid replication Element etc.), and can transform influences larger bacterial strain (to introduce cre recombinases and second resistance marker system on bacterial growth System, can for the second time recombinate the transformation bacterial strain for obtaining by resistance screening, kill the wild-type strain of survival ability is strong, express afterwards Cre recombinases, cut away second resistance marker, and the fragment of residual is not interfered with to be transformed bacterial strain again).
Brief description of the drawings
Fig. 1 is Technology Roadmap in the present invention
Fig. 2 is the Technology Roadmap of optimization in the present invention
Fig. 3 is the pBTS structure charts in the present invention
Fig. 4 is the pBTS-IC structure charts in the present invention
Specific embodiment
With reference to specific embodiment, the present invention is described in further detail:
Embodiment 1
(1) by EcoR I and Apa I inscribe cleavage pBAV1K-T5-GFP plasmids, the MCS fragments with synthesis are carried out together Source recombinates, and obtains plasmid pBAV1K.
Restriction endonuclease in this experiment and follow-up test uses the quick restriction endonuclease of Thermo companies, and fragment is reclaimed and uses Chengdu The glue reclaim kit (DE-02011) of Fu Ji biotech firms, MCS fragments are the synthesis of purchase Jin Wei intelligence bio tech ltd Fragment, homologous recombination using Tiangeng EsayGeno Quick Castings Cloning Kit (VI201-02), coli strain is Top10, prepares competence and uses KCM methods, and plasmid extraction is using the biological universal plasmid Mini Kit (DE- in good fortune border 01001)。
(2) primer is designed, the pBAV1K fragments of Nde I restriction enzyme sites are deleted in amplification same sense mutation, using homologous recombination gram Grand mode junction fragment, obtains plasmid and is named as pBTS.
Primer in this experiment and subsequent experimental is synthesized by Jin Wei intelligence bio tech ltd.
Embodiment 2:
Full genome synthesizes IC fragments, is inserted between XbaI the and Pst I of pBTS by homologous recombination, obtains plasmid pBTS-IC.Here what is obtained is the pBTS-IC plasmids in preferred scheme;PBTS-FR-X may refer to following transformation xylAB The plasmid of gene.
Embodiment 3:
1st, the fragment xyl-F of the xylose xylAB operators upstream 493bp of design primer amplification Z12 bacterial strains, insertion pBTS's Between EcoR I and BamHI sites, plasmid pBTS-xyl-F is obtained;Expand the fragment xyl-R of downstream 620bp, insertion plasmid pBTS- Between BamHI the and Hind III of xyl-F, plasmid pBTS-xyl plasmids (knocking out xylAB operators) are obtained.High-fidelity enzyme is used KOD-Plus hi-fis polymerase (KOD-201) of toyobo.
2nd, design primer expand Z12 bacterial strains pgsBCA operators upstream 693bp fragments, insert pBTS EcoR I and Between BamHI sites, obtain plasmid pBTS-pgs-F amplification downstream 558bp fragments, the BamHI of insertion plasmid pBTS-pgs-F and Between Hind III, plasmid pBTS-pgs is obtained.Full genome synthesizes zeo fragments, inserts the BamHI sites of pBTS-pgs, obtains Plasmid pBTS-pgs-Z (knocks out pgsBCA operators, but contains blasticidin resistance mark in the middle of homologous recombination fragment).
Embodiment 4:
Bacterial strain method for transformation is referring to hypertonic conversion method (High osmolarity improves the electro- transformation efficiency of the gram-positive bacteria Bacillus subtilis and Bacillus licheniformis, 1999).The new line single bacterium colony of Z12 bacterial strains is taken, about 3ml GM (LB+0.5M mountains are inoculated into Pears sugar alcohol) in culture medium, 37 DEG C, 180rpm incubated overnights.The next morning presses 1:100 are inoculated into 50ml GM culture mediums, and 37 DEG C, bacterium solution when bacterium solution grows into OD and reaches between 0.85-0.95, is put into precooling 10min on ice by 180rpm cultures;4 DEG C, Supernatant is removed in 5000g, 5min, centrifugation, and with the EM of isometric precooling, (0.5M D-sorbite+0.5M+10% glycerine of mannitol is water-soluble Liquid) resuspended thalline, 4 DEG C again, supernatant is removed in 5000g, 5min, centrifugation, repeated washing 4 times altogether;Add the EM of about 1/40 volume Resuspended thalline, it is ensured that bacterial concentration is in 1-1.3 × 1010Between cfu/ml.The above-mentioned bacterium solutions of 60ul are taken, 1ul plasmids to be transformed are added (pBTS-xyl and pBTS-pgs-Z), plasmid concentration is more than 100ng/ul, and piping and druming is mixed, and is subsequently adding the 1mm electric shock cups of precooling. Electric conversion instrument (Eppendorf Eporator) parameter setting, 2.1kV, the actual electric shock time, in 4.0-5.0ms, has been only possible to Conversion colony growth.After electric shock.Immediately plus 1ml RM (LB+0.5M D-sorbite+0.38M mannitols), piping and druming is mixed, and is transferred to In 5ml sterile centrifugation tubes, 37 DEG C, 180rpm cultures 3h.Bacterium solution is centrifuged, is diluted by a certain percentage after removing supernatant, take 200ul paintings Cloth on the LB flat boards containing 30mg/L kanamycins, 37 DEG C of incubated overnights, while bacterium solution of the coating without electricity conversion does feminine gender Control.The next morning observes colony growth situation, if reformer plate has colony growth, negative control does not have, then show to change into Work(.It is Z12-pBTS-xyl or Z12-pBTS-pgs-Z to name the bacterial strain for obtaining.
Embodiment 5:
(1) take bacterium Z12-pBTS-xyl to be inoculated into 3ml LB culture mediums, 45 DEG C, 180rpm, cultivate 24h;Separately connect bacterium Z12-pBTS is compareed.
(2) take the bacterium solution 200ul in 1 to be applied on the LB flat boards containing 30mg/L kanamycins, 45 DEG C of incubated overnights.If Z12-pBTS does not have colony growth, and Z12-pBTS-xyl has colony growth, then the bacterial strain for obtaining completes to recombinate for the first time, is named as Z12-pBTS-xyl-45。
(3) connect in bacterium Z12-pBTS-xyl-45 to 3ml LB culture mediums, incubated overnight, extracting genome (is given birth on Chengdu good fortune border Thing Technology Co., Ltd., bacterial genomes DNA extraction kit, DE-05311), PCR amplifications xyl fragments are verified (Chengdu Fu Ji Bioisystech Co., Ltd, 2 × fast PCR reaction premix system, DP-20041.Primer sequence, F: CAAAATGTCTTTCGTTATTTCTGGAG, R:AGTGTTCGCTGACAAAATACGGTTC, 60 DEG C of annealing, 2min extends).
(4) the Z12-pBTS-xyl-45 bacterial strains that the positive is verified as in 3 are taken, is inoculated into 37 DEG C in 3ml LB bases, 180rpm trainings Support, every 8-16h passages once, after continuous passage 8 times, take bacterium solution dilution 106Times, coat on the LB flat boards of nonreactive, obtain Single bacterium colony.
(5) single bacterium colony in 4 is taken, while being scoring on LB and the LB flat boards containing 30mg/L kanamycins, nonreactive is screened Bacterium colony, it is necessary to obtain 5-10 plants of nonreactive bacterium colony.
(6) the nonreactive bacterium colony in 5 is taken, is inoculated into 3ml LB culture mediums, 37 DEG C, 180rpm incubated overnights, extract bacterium Genome, expands xyl fragments and verifies (Chengdu Fu Ji Bioisystech Co., Ltd, 2 × fast PCR reaction premixed material by PCR System, DP-20041.Primer sequence, F:CAAAATGTCTTTCGTTATTTCTGGAG, R: AGTGTTCGCTGACAAAATACGGTTC, 60 DEG C of annealing, 2min extends) (wild type knocks out xyl bases to homologous recombination result Cause).The fragment of the positive is taken, Song Jinwei intelligence bio tech ltd further carries out sequence verification, obtain the bacterial strain of the positive i.e. To knock out bacterial strain --- the Z12 (△ xylAB) of xyl genes.
(7) Z12 (△ xylAB) and Z12 bacterial strains are taken, according to the wood-sugar fermentation experimental verification in primary Jie Shi Bacteria Identifications handbook The ability of its fermenting xylose, as a result shows that Z12 can be with fermenting xylose, but Z12 (△ xylAB) is unable to fermenting xylose.
Embodiment 6:
(1) take bacterium Z12-pBTS-pgs-Z to be inoculated into 3ml LB culture mediums, 45 DEG C, 180rpm, cultivate 24h;Separately connect bacterium Z12-pBTS is compareed.
(2) take the bacterium solution 200ul in 1 to be applied on the LB flat boards containing 30mg/L kanamycins, 45 DEG C of incubated overnights.If Z12-pBTS does not have colony growth, and Z12-pBTS-pgs-Z has colony growth, then the bacterial strain for obtaining completes to recombinate for the first time, name It is Z12-pBTS-pgs-Z-45.
(3) connect in bacterium Z12-pBTS-xyl-45 to 3ml LB culture mediums, incubated overnight extracts genome, PCR amplifications pgs Fragment is verified (primer sequence, F:AGCTGTTCCGATTTTATACTGGTC, R:TAGCCAAAACAGCTCCTCCTTG, 60 DEG C annealing, 2min extend).
(4) the Z12-pBTS-pgs-Z-45 bacterial strains that the positive is verified as in 3 are taken, is inoculated into and is contained 30mg/L bleomycins 37 DEG C in 3mlLB bases, 180rpm cultures every 8-16h passages once, after continuous passage 10 times, take bacterium solution dilution 106Times, apply It is distributed on the LB flat boards containing 30mg/L bleomycins, obtains single bacterium colony.
(5) single bacterium colony in 4 is taken, while being scoring to containing 30mg/L kanamycins and containing 30mg/L bleomycins On LB flat boards, screening comprises only the bacterium colony of blasticidin resistance, it is necessary to obtain 3-5 plants of monoclonal antibody bacterium colony.
(6) the monoclonal antibody bacterium colony in 5 is taken, is inoculated into 3ml LB culture mediums, 37 DEG C, 180rpm incubated overnights, extract bacterium Genome, expands pgs fragments and verifies (primer sequence, F by PCR:AGCTGTTCCGATTTTATACTGGTC, R: TAGCCAAAACAGCTCCTCCTTG, 60 DEG C of annealing, 2min extends) homologous recombination result (wild type knocks out pgs genes). It is Z12-pgs-Z to name the positive strain.
(7) Z12-pgs-Z bacterial strains are entered by electricity conversion pBTS-IC plasmids, is named as Z12-pgs-Z-pBTS-IC.
(8) bacterium Z12-pgs-Z-pBTS-IC is met in the 3ml LB culture mediums containing 1mM IPTG, 37 DEG C, 180rpm, mistake Night cultivates.
(9) take the bacterium solution in 8 to be inoculated into 3ml LB culture mediums, 45 DEG C, 180rpm, cultivate 24h.Bacterium solution dilution 106Times, It is applied on the LB flat boards of nonreactive, 45 DEG C, incubated overnight obtains single bacterium colony.
(10) take the single bacterium colony in 9 and contain 30mg/L kanamycins, 30mg/L bleomycins and nonreactive while being scoring to On LB flat boards, the bacterial strain of nonreactive is screened.
(11) nonreactive bacterial strain in 10 is taken, is inoculated into 3ml LB culture mediums, 37 DEG C, 180rpm, incubated overnight.Extracting base Because of group, pgs fragments are expanded by PCR and verifies whether correctly to cut blasticidin resistance fragment.To positive fragment, Jin Weizhi is sent Bio tech ltd carries out sequencing identification, knocks out pgsBCA operators and does not contain the bacterial strain of blasticidin resistance mark i.e. To complete the bacterial strain of transformation, Z12 (△ pgsBCA) is named as.
Presently preferred embodiments of the present invention is the foregoing is only, is not intended to limit the invention, it is all in essence of the invention Any modification, equivalent and improvement made within god and principle etc., should be included within the scope of the present invention.
Sequence table
SEQUENCE LISTING
<110>Chengdu Mei Yide Bioisystech Co., Ltd
<120>A kind of method for transforming bacillus gene group
<160>3
<170>PatentIn version 3.3
<210>1
<211>2847
<212>DNA
<213>It is artificial synthesized
<220>
<223>PBTS sequences
<400>1
gacgtcgaattcgaggtacctgcggccgcaggatccatctagacgctcgagagctgcagtgaagcttcagggcccga tcgatgccgccgcttaattaattaatccagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcg ttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagtgtcattttattt cccccgtttcagcatcaagaacctttgcataacttgctctatatccacactgataattgccctcaaaccataatcta aaggcgctagagtttgttgaaacaatatcttttacatcattcgtatttaaaattccaaactccgctcccctaaggcg aataaaagccattaaatcttttgtatttaccaaattatagtcatccactatatctaagagtaaattcttcaattctc ttttttggctttcatcaagtgttatatagcggtcaatatcaaaatcattaatgttcaaaatatcttttttgtcgtat atatgtttattcttagcaatagcgtcctttgattcatgagtcaaatattcataagaacctttgatataatcaagtat ctcaacatgagcaactgaactattccccaattttcgcttaatcttgttcctaacgctttctattgttacaggatttc gtgcaatatatataacgtgatagtgtggttttttatagtgctttccatttcgtataacatcactactattccatgta tctttatcttttttttcgtccatatcgtgtaaaggactgacagccatagatacgcccaaactctctaatttttcctt ccaatcattaggaattgagtcaggatataataaaaatccaaaatttctagctttagtatttttaatagccatgatat aattaccttatcaaaaacaagtagcgaaaactcgtatccttctaaaaacgcgagctttcgcttattttttttgttct gattcctttcttgcatattcttctatagctaacgccgcaaccgcagattttgaaaaacctttttgtttcgccatatc tgttaattttttatcttgctcttttgtcagagaaatcataactctttttttcgattctgaaatcaccatttaaaaaa ctccaatcaaataattttataaagttagtgtatcactttgtaatcataaaaacaacaataaagctacttaaatatag atttataaaaaacgttggcgaaaacgttggcgattcgttggcgattgaaaaaccccttaaacccttgagccagttgg gatagagcgtttttggcacaaaaattggcactcggcacttaatggggggtcgtagtacggaagcaaaattcgcttcc tttccccccatttttttccaaattccaaatttttttcaaaaattttccagcgctaccgctcggcaaaattgcaagca atttttaaaatcaaacccatgagggaatttcattccctcatactcccttgagcctcctccaaccgaaatagaagggc gctgcgcttattatttcattcagtcatcggctttcataatctaacagacaacatcttcgctgcaaagccacgctacg ctcaagggcttttacgctacgataacgcctgttttaacgattatgccgataactaaacgaaataaacgctaaaacgt ctcagaaacgattttgagacgttttaataaaaaatcgcctagtgcttggattctcaccaataaaaaacgcccggcgg caaccgagcgttctgaacaaatccagatggagttctgaggtcattactggatctatcaacaggagtccaagcgagct cggtactaaaacaattcatccagtaaaatataatattttattttctcccaatcaggcttgatccccagtaagtcaaa aaatagctcgacatactgttcttccccgatatcctccctgatcgaccggacgcagaaggcaatgtcataccacttgt ccgccctgccgcttctcccaagatcaataaagccacttactttgccatctttcacaaagatgttgctgtctcccagg tcgccgtgggaaaagacaagttcctcttcgggcttttccgtctttaaaaaatcatacagctcgcgcggatctttaaa tggagtgtcttcttcccagttttcgcaatccacatcggccagatcgttattcagtaagtaatccaattcggctaagc ggccgtctaagctattcgtatagggacaatccgatatgtcgatggagtgaaagagcctgatgcactccgcatacagc tcgatagtcttttcagggctttgttcatcttcatacccttccgagcaaaggacgccatcggcctcactcatgagcag attgctccagccatcatgccgttcaaagtgcaggacctttggaacaggcagctttccttccagccatagcatcatgt ccttttcccgttccacatcataggtggtccctttataccggctgtccgtcatttttaaatataggatttcattttct cccaccagcttatataccttagcaggagacattccttccgtatcttttacgcagcggtattcttcgatcagtttttt caattccggtgatattctcattttagccatttattatttccttcctcttttctacagtatttaaagataccccaaga agctaattataacaagacgaactccaattcactgttccttgcattctaaaaccttaaatacagaaaacagccttttc aaagttgttttcaaagttggcgtataacatagtatcgacggagccgattttgaaaccacaattatgatagaattt 2847
<210>2
<211>3344
<212>DNA
<213>It is artificial synthesized
<220>
<223>PBTS-Z sequences
<400>2
gacgtcgaattcgaggtacctgcggccgcaggatcctaccgttcgtatagcatacattatacgaagttatcttgata tggctttttatatgtgttactctacatacagaaaggaggaactaaatatggccaagttgaccagtgccgttccggtg ctcaccgcgcgcgacgtcgccggagcggtcgagttctggaccgaccggctcgggttctcccgggacttcgtggagga cgacttcgccggtgtggtccgggacgacgtgaccctgttcatcagcgcggtccaggaccaggtggtgccggacaaca ccctggcctgggtgtgggtgcgcggcctggacgagctgtacgccgagtggtcggaggtcgtgtccacgaacttccgg gacgcctccgggccggccatgaccgagatcggcgagcagccgtgggggcgggagttcgccctgcgcgacccggccgg caactgcgtgcacttcgtggccgaggagcaggactgaataacttcgtatagcatacattatacgaacggtaGtctag acgctcgagagctgcagtgaagcttcagggcccgatcgatgccgccgcttaattaattaatccagaggcatcaaata aaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggac aaatccgccgccctagacctagtgtcattttatttcccccgtttcagcatcaagaacctttgcataacttgctctat atccacactgataattgccctcaaaccataatctaaaggcgctagagtttgttgaaacaatatcttttacatcattc gtatttaaaattccaaactccgctcccctaaggcgaataaaagccattaaatcttttgtatttaccaaattatagtc atccactatatctaagagtaaattcttcaattctcttttttggctttcatcaagtgttatatagcggtcaatatcaa aatcattaatgttcaaaatatcttttttgtcgtatatatgtttattcttagcaatagcgtcctttgattcatgagtc aaatattcataagaacctttgatataatcaagtatctcaacatgagcaactgaactattccccaattttcgcttaat cttgttcctaacgctttctattgttacaggatttcgtgcaatatatataacgtgatagtgtggttttttatagtgct ttccatttcgtataacatcactactattccatgtatctttatcttttttttcgtccatatcgtgtaaaggactgaca gccatagatacgcccaaactctctaatttttccttccaatcattaggaattgagtcaggatataataaaaatccaaa atttctagctttagtatttttaatagccatgatataattaccttatcaaaaacaagtagcgaaaactcgtatccttc taaaaacgcgagctttcgcttattttttttgttctgattcctttcttgcatattcttctatagctaacgccgcaacc gcagattttgaaaaacctttttgtttcgccatatctgttaattttttatcttgctcttttgtcagagaaatcataac tctttttttcgattctgaaatcaccatttaaaaaactccaatcaaataattttataaagttagtgtatcactttgta atcataaaaacaacaataaagctacttaaatatagatttataaaaaacgttggcgaaaacgttggcgattcgttggc gattgaaaaaccccttaaacccttgagccagttgggatagagcgtttttggcacaaaaattggcactcggcacttaa tggggggtcgtagtacggaagcaaaattcgcttcctttccccccatttttttccaaattccaaatttttttcaaaaa ttttccagcgctaccgctcggcaaaattgcaagcaatttttaaaatcaaacccatgagggaatttcattccctcata ctcccttgagcctcctccaaccgaaatagaagggcgctgcgcttattatttcattcagtcatcggctttcataatct aacagacaacatcttcgctgcaaagccacgctacgctcaagggcttttacgctacgataacgcctgttttaacgatt atgccgataactaaacgaaataaacgctaaaacgtctcagaaacgattttgagacgttttaataaaaaatcgcctag tgcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctgaggtc attactggatctatcaacaggagtccaagcgagctcggtactaaaacaattcatccagtaaaatataatattttatt ttctcccaatcaggcttgatccccagtaagtcaaaaaatagctcgacatactgttcttccccgatatcctccctgat cgaccggacgcagaaggcaatgtcataccacttgtccgccctgccgcttctcccaagatcaataaagccacttactt tgccatctttcacaaagatgttgctgtctcccaggtcgccgtgggaaaagacaagttcctcttcgggcttttccgtc tttaaaaaatcatacagctcgcgcggatctttaaatggagtgtcttcttcccagttttcgcaatccacatcggccag atcgttattcagtaagtaatccaattcggctaagcggccgtctaagctattcgtatagggacaatccgatatgtcga tggagtgaaagagcctgatgcactccgcatacagctcgatagtcttttcagggctttgttcatcttcatacccttcc gagcaaaggacgccatcggcctcactcatgagcagattgctccagccatcatgccgttcaaagtgcaggacctttgg aacaggcagctttccttccagccatagcatcatgtccttttcccgttccacatcataggtggtccctttataccggc tgtccgtcatttttaaatataggatttcattttctcccaccagcttatataccttagcaggagacattccttccgta tcttttacgcagcggtattcttcgatcagttttttcaattccggtgatattctcattttagccatttattatttcct tcctcttttctacagtatttaaagataccccaagaagctaattataacaagacgaactccaattcactgttccttgc attctaaaaccttaaatacagaaaacagccttttcaaagttgttttcaaagttggcgtataacatagtatcgacgga gccgattttgaaaccacaattatgatagaattt3344
<210>3
<211>5528
<212>DNA
<213>It is artificial synthesized
<220>
<223>PBTS-IC sequences
<400>3
gacgtcgaattcgaggtacctgcggccgcaggatccatctagataactcacattaattgcgttgcgctcactgcccg ctttccagtcgggaaacctgtcgtgccagctgcattaatgaatcggccaacgcgcggggagaggcggtttgcgtatt gggcgccagggtggtttttcttttcaccagtgagacgggcaacagctgattgcccttcaccgcctggccctgagaga gttgcagcaagcggtccacgctggtttgccccagcaggcgaaaatcctgtttgatggtggttgacggcgggatataa catgagctgtcttcggtatcgtcgtatcccactaccgagatatccgcaccaacgcgcagcccggactcggtaatggc gcgcattgcgcccagcgccatctgatcgttggcaaccagcatcgcagtgggaacgatgccctcattcagcatttgca tggtttgttgaaaaccggacatggcactccagtcgccttcccgttccgctatcggctgaatttgattgcgagtgaga tatttatgccagccagccagacgcagacgcgccgagacagaacttaatgggcccgctaacagcgcgatttgctggtg acccaatgcgaccagatgctccacgcccagtcgcgtaccgtcttcatgggagaaaataatactgttgatgggtgtct ggtcagagacatcaagaaataacgccggaacattagtgcaggcagcttccacagcaatggcatcctggtcatccagc ggatagttaatgatcagcccactgacgcgttgcgcgagaagattgtgcaccgccgctttacaggcttcgacgccgct tcgttctaccatcgacaccaccacgctggcacccagttgatcggcgcgagatttaatcgccgcgacaatttgcgacg gcgcgtgcagggccagactggaggtggcaacgccaatcagcaacgactgtttgcccgccagttgttgtgccacgcgg ttgggaatgtaattcagctccgccatcgccgcttccactttttcccgcgttttcgcagaaacgtggctggcctggtt caccacgcgggaaacggtctgataagagacaccggcatactctgcgacatcgtataacgttactggtttcatcaaaa tcgtctccctccgtttgaatatttgattgatcgtaaccagatgaagcactctttccactatccctacagtgttatgg cttgaacaatcacgaaacaataattggtacgtacgatctttcagccgactcaaacatcaaatcttacaaatgtagtc tttgaaagtattacatatgtaagatttaaatgcaaccgttttttcggaaggaaatgatgacctcgtttccaccggaa ttagcttgcatgcctaatcgccatcttccagcaggcgcaccattgcccctgtttcactatccaggttacggatatag ttcatgacaatatttacattggtccagccaccagcttgcatgatctccggtattgaaactccagcgcgggccatatc tcgcgcggctccgacacgggcactgtgtccagaccaggccaggtatctctgaccagagtcatccttagcgccgtaaa tcaatcgatgagttgcttcaaaaatcccttccagggcgcgagttgatagctggctggtggcagatggcgcggcaaca ccattttttctgacccggcaaaacaggtagttattcggatcatcagctacaccagagacggaaatccatcgctcgac cagtttagttacccccaggctaagtgccttctctacacctgcggtgctaaccagcgttttcgttctgccaatatgga ttaacattctcccaccgtcagtacgtgagatatctttaaccctgatcctggcaatttcggctatacgtaacagggtg ttataagcaatccccagaaatgccagattacgtatatcctggcagcgatcgctattttccatgagtgaacgaacctg gtcgaaatcagtgcgttcgaacgctagagcctgttttgcacgttcaccggcatcaacgttttcttttcggatccgcc gcataaccagtgaaacagcattgctgtcacttggtcgtggcagcccggaccgacgatgaagcatgtttagctggccc aaatgttgctggatagtttttactgccagaccgcgcgcctgaagatatagaagataatcgcgaacatcttcaggttc tgcgggaaaccatttccggttattcaacttgcaccatgccgcccacgaccggcaaacggacagaagcattttccagg tatgctcagaaaacgcctggcgatccctgaacatgtccatcaggttcttgcgaacctcatcactcgttgcatcgacc ggtaatgcaggcaaattttggtgtacggtcagtaaattggacatacctgcttcctccttaagcttaattgttatccg ctcacaattccacacattatgccacaccttgtagataaagtcaacaactttttgcaaaatttttcaggaattttagc agaggttgttctggatgtagaacaaaacatctttccgctcttgtgctgttaggatatctttcttggaagctaggtag gcaagggctacctcaaataaatcttcttcagggtgcgctatttttaaggtgcctagtgaggtcttgaccacttcacc cataatttcagtgccgaatagtctggactgggctgtgtactgcagtgaagcttcagggcccgatcgatgccgccgct taattaattaatccagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtt tgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagtgtcattttatttcccccgtttcagca tcaagaacctttgcataacttgctctatatccacactgataattgccctcaaaccataatctaaaggcgctagagtt tgttgaaacaatatcttttacatcattcgtatttaaaattccaaactccgctcccctaaggcgaataaaagccatta aatcttttgtatttaccaaattatagtcatccactatatctaagagtaaattcttcaattctcttttttggctttca tcaagtgttatatagcggtcaatatcaaaatcattaatgttcaaaatatcttttttgtcgtatatatgtttattctt agcaatagcgtcctttgattcatgagtcaaatattcataagaacctttgatataatcaagtatctcaacatgagcaa ctgaactattccccaattttcgcttaatcttgttcctaacgctttctattgttacaggatttcgtgcaatatatata acgtgatagtgtggttttttatagtgctttccatttcgtataacatcactactattccatgtatctttatctttttt ttcgtccatatcgtgtaaaggactgacagccatagatacgcccaaactctctaatttttccttccaatcattaggaa ttgagtcaggatataataaaaatccaaaatttctagctttagtatttttaatagccatgatataattaccttatcaa aaacaagtagcgaaaactcgtatccttctaaaaacgcgagctttcgcttattttttttgttctgattcctttcttgc atattcttctatagctaacgccgcaaccgcagattttgaaaaacctttttgtttcgccatatctgttaattttttat cttgctcttttgtcagagaaatcataactctttttttcgattctgaaatcaccatttaaaaaactccaatcaaataa ttttataaagttagtgtatcactttgtaatcataaaaacaacaataaagctacttaaatatagatttataaaaaacg ttggcgaaaacgttggcgattcgttggcgattgaaaaaccccttaaacccttgagccagttgggatagagcgttttt ggcacaaaaattggcactcggcacttaatggggggtcgtagtacggaagcaaaattcgcttcctttccccccatttt tttccaaattccaaatttttttcaaaaattttccagcgctaccgctcggcaaaattgcaagcaatttttaaaatcaa acccatgagggaatttcattccctcatactcccttgagcctcctccaaccgaaatagaagggcgctgcgcttattat ttcattcagtcatcggctttcataatctaacagacaacatcttcgctgcaaagccacgctacgctcaagggctttta cgctacgataacgcctgttttaacgattatgccgataactaaacgaaataaacgctaaaacgtctcagaaacgattt tgagacgttttaataaaaaatcgcctagtgcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttct gaacaaatccagatggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcggtactaaaacaa ttcatccagtaaaatataatattttattttctcccaatcaggcttgatccccagtaagtcaaaaaatagctcgacat actgttcttccccgatatcctccctgatcgaccggacgcagaaggcaatgtcataccacttgtccgccctgccgctt ctcccaagatcaataaagccacttactttgccatctttcacaaagatgttgctgtctcccaggtcgccgtgggaaaa gacaagttcctcttcgggcttttccgtctttaaaaaatcatacagctcgcgcggatctttaaatggagtgtcttctt cccagttttcgcaatccacatcggccagatcgttattcagtaagtaatccaattcggctaagcggccgtctaagcta ttcgtatagggacaatccgatatgtcgatggagtgaaagagcctgatgcactccgcatacagctcgatagtcttttc agggctttgttcatcttcatacccttccgagcaaaggacgccatcggcctcactcatgagcagattgctccagccat catgccgttcaaagtgcaggacctttggaacaggcagctttccttccagccatagcatcatgtccttttcccgttcc acatcataggtggtccctttataccggctgtccgtcatttttaaatataggatttcattttctcccaccagcttata taccttagcaggagacattccttccgtatcttttacgcagcggtattcttcgatcagttttttcaattccggtgata ttctcattttagccatttattatttccttcctcttttctacagtatttaaagataccccaagaagctaattataaca agacgaactccaattcactgttccttgcattctaaaaccttaaatacagaaaacagccttttcaaagttgttttcaa agttggcgtataacatagtatcgacggagccgattttgaaaccacaattatgatagaattt5528
Sequence table
SEQUENCE LISTING
<110>Chengdu Mei Yide Bioisystech Co., Ltd
<120>A kind of method for transforming bacillus gene group
<160> 3
<170> PatentIn version 3.3
<210> 1
<211> 2847
<212> DNA
<213>It is artificial synthesized
<220>
<223>PBTS sequences
<400> 1
gacgtcgaattcgaggtacctgcggccgcaggatccatctagacgctcgagagctgcagtgaagcttcagggc ccgatcgatgccgccgcttaattaattaatccagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcct ttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagtgtcatttt atttcccccgtttcagcatcaagaacctttgcataacttgctctatatccacactgataattgccctcaaaccataa tctaaaggcgctagagtttgttgaaacaatatcttttacatcattcgtatttaaaattccaaactccgctcccctaa ggcgaataaaagccattaaatcttttgtatttaccaaattatagtcatccactatatctaagagtaaattcttcaat tctcttttttggctttcatcaagtgttatatagcggtcaatatcaaaatcattaatgttcaaaatatcttttttgtc gtatatatgtttattcttagcaatagcgtcctttgattcatgagtcaaatattcataagaacctttgatataatcaa gtatctcaacatgagcaactgaactattccccaattttcgcttaatcttgttcctaacgctttctattgttacagga tttcgtgcaatatatataacgtgatagtgtggttttttatagtgctttccatttcgtataacatcactactattcca tgtatctttatcttttttttcgtccatatcgtgtaaaggactgacagccatagatacgcccaaactctctaattttt ccttccaatcattaggaattgagtcaggatataataaaaatccaaaatttctagctttagtatttttaatagccatg atataattaccttatcaaaaacaagtagcgaaaactcgtatccttctaaaaacgcgagctttcgcttattttttttg ttctgattcctttcttgcatattcttctatagctaacgccgcaaccgcagattttgaaaaacctttttgtttcgcca tatctgttaattttttatcttgctcttttgtcagagaaatcataactctttttttcgattctgaaatcaccatttaa aaaactccaatcaaataattttataaagttagtgtatcactttgtaatcataaaaacaacaataaagctacttaaat atagatttataaaaaacgttggcgaaaacgttggcgattcgttggcgattgaaaaaccccttaaacccttgagccag ttgggatagagcgtttttggcacaaaaattggcactcggcacttaatggggggtcgtagtacggaagcaaaattcgc ttcctttccccccatttttttccaaattccaaatttttttcaaaaattttccagcgctaccgctcggcaaaattgca agcaatttttaaaatcaaacccatgagggaatttcattccctcatactcccttgagcctcctccaaccgaaatagaa gggcgctgcgcttattatttcattcagtcatcggctttcataatctaacagacaacatcttcgctgcaaagccacgc tacgctcaagggcttttacgctacgataacgcctgttttaacgattatgccgataactaaacgaaataaacgctaaa acgtctcagaaacgattttgagacgttttaataaaaaatcgcctagtgcttggattctcaccaataaaaaacgcccg gcggcaaccgagcgttctgaacaaatccagatggagttctgaggtcattactggatctatcaacaggagtccaagcg agctcggtactaaaacaattcatccagtaaaatataatattttattttctcccaatcaggcttgatccccagtaagt caaaaaatagctcgacatactgttcttccccgatatcctccctgatcgaccggacgcagaaggcaatgtcataccac ttgtccgccctgccgcttctcccaagatcaataaagccacttactttgccatctttcacaaagatgttgctgtctcc caggtcgccgtgggaaaagacaagttcctcttcgggcttttccgtctttaaaaaatcatacagctcgcgcggatctt taaatggagtgtcttcttcccagttttcgcaatccacatcggccagatcgttattcagtaagtaatccaattcggct aagcggccgtctaagctattcgtatagggacaatccgatatgtcgatggagtgaaagagcctgatgcactccgcata cagctcgatagtcttttcagggctttgttcatcttcatacccttccgagcaaaggacgccatcggcctcactcatga gcagattgctccagccatcatgccgttcaaagtgcaggacctttggaacaggcagctttccttccagccatagcatc atgtccttttcccgttccacatcataggtggtccctttataccggctgtccgtcatttttaaatataggatttcatt ttctcccaccagcttatataccttagcaggagacattccttccgtatcttttacgcagcggtattcttcgatcagtt ttttcaattccggtgatattctcattttagccatttattatttccttcctcttttctacagtatttaaagatacccc aagaagctaattataacaagacgaactccaattcactgttccttgcattctaaaaccttaaatacagaaaacagcct tttcaaagttgttttcaaagttggcgtataacatagtatcgacggagccgattttgaaaccacaattatgatagaat tt 2847
<210> 2
<211> 3344
<212> DNA
<213>It is artificial synthesized
<220>
<223>PBTS-Z sequences
<400> 2
gacgtcgaattcgaggtacctgcggccgcaggatcctaccgttcgtatagcatacattatacgaagttatctt gatatggctttttatatgtgttactctacatacagaaaggaggaactaaatatggccaagttgaccagtgccgttcc ggtgctcaccgcgcgcgacgtcgccggagcggtcgagttctggaccgaccggctcgggttctcccgggacttcgtgg aggacgacttcgccggtgtggtccgggacgacgtgaccctgttcatcagcgcggtccaggaccaggtggtgccggac aacaccctggcctgggtgtgggtgcgcggcctggacgagctgtacgccgagtggtcggaggtcgtgtccacgaactt ccgggacgcctccgggccggccatgaccgagatcggcgagcagccgtgggggcgggagttcgccctgcgcgacccgg ccggcaactgcgtgcacttcgtggccgaggagcaggactgaataacttcgtatagcatacattatacgaacggtaGt ctagacgctcgagagctgcagtgaagcttcagggcccgatcgatgccgccgcttaattaattaatccagaggcatca aataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagta ggacaaatccgccgccctagacctagtgtcattttatttcccccgtttcagcatcaagaacctttgcataacttgct ctatatccacactgataattgccctcaaaccataatctaaaggcgctagagtttgttgaaacaatatcttttacatc attcgtatttaaaattccaaactccgctcccctaaggcgaataaaagccattaaatcttttgtatttaccaaattat agtcatccactatatctaagagtaaattcttcaattctcttttttggctttcatcaagtgttatatagcggtcaata tcaaaatcattaatgttcaaaatatcttttttgtcgtatatatgtttattcttagcaatagcgtcctttgattcatg agtcaaatattcataagaacctttgatataatcaagtatctcaacatgagcaactgaactattccccaattttcgct taatcttgttcctaacgctttctattgttacaggatttcgtgcaatatatataacgtgatagtgtggttttttatag tgctttccatttcgtataacatcactactattccatgtatctttatcttttttttcgtccatatcgtgtaaaggact gacagccatagatacgcccaaactctctaatttttccttccaatcattaggaattgagtcaggatataataaaaatc caaaatttctagctttagtatttttaatagccatgatataattaccttatcaaaaacaagtagcgaaaactcgtatc cttctaaaaacgcgagctttcgcttattttttttgttctgattcctttcttgcatattcttctatagctaacgccgc aaccgcagattttgaaaaacctttttgtttcgccatatctgttaattttttatcttgctcttttgtcagagaaatca taactctttttttcgattctgaaatcaccatttaaaaaactccaatcaaataattttataaagttagtgtatcactt tgtaatcataaaaacaacaataaagctacttaaatatagatttataaaaaacgttggcgaaaacgttggcgattcgt tggcgattgaaaaaccccttaaacccttgagccagttgggatagagcgtttttggcacaaaaattggcactcggcac ttaatggggggtcgtagtacggaagcaaaattcgcttcctttccccccatttttttccaaattccaaatttttttca aaaattttccagcgctaccgctcggcaaaattgcaagcaatttttaaaatcaaacccatgagggaatttcattccct catactcccttgagcctcctccaaccgaaatagaagggcgctgcgcttattatttcattcagtcatcggctttcata atctaacagacaacatcttcgctgcaaagccacgctacgctcaagggcttttacgctacgataacgcctgttttaac gattatgccgataactaaacgaaataaacgctaaaacgtctcagaaacgattttgagacgttttaataaaaaatcgc ctagtgcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctga ggtcattactggatctatcaacaggagtccaagcgagctcggtactaaaacaattcatccagtaaaatataatattt tattttctcccaatcaggcttgatccccagtaagtcaaaaaatagctcgacatactgttcttccccgatatcctccc tgatcgaccggacgcagaaggcaatgtcataccacttgtccgccctgccgcttctcccaagatcaataaagccactt actttgccatctttcacaaagatgttgctgtctcccaggtcgccgtgggaaaagacaagttcctcttcgggcttttc cgtctttaaaaaatcatacagctcgcgcggatctttaaatggagtgtcttcttcccagttttcgcaatccacatcgg ccagatcgttattcagtaagtaatccaattcggctaagcggccgtctaagctattcgtatagggacaatccgatatg tcgatggagtgaaagagcctgatgcactccgcatacagctcgatagtcttttcagggctttgttcatcttcataccc ttccgagcaaaggacgccatcggcctcactcatgagcagattgctccagccatcatgccgttcaaagtgcaggacct ttggaacaggcagctttccttccagccatagcatcatgtccttttcccgttccacatcataggtggtccctttatac cggctgtccgtcatttttaaatataggatttcattttctcccaccagcttatataccttagcaggagacattccttc cgtatcttttacgcagcggtattcttcgatcagttttttcaattccggtgatattctcattttagccatttattatt tccttcctcttttctacagtatttaaagataccccaagaagctaattataacaagacgaactccaattcactgttcc ttgcattctaaaaccttaaatacagaaaacagccttttcaaagttgttttcaaagttggcgtataacatagtatcga cggagccgattttgaaaccacaattatgatagaattt 3344
<210> 3
<211> 5528
<212> DNA
<213>It is artificial synthesized
<220>
<223>PBTS-IC sequences
<400> 3
gacgtcgaattcgaggtacctgcggccgcaggatccatctagataactcacattaattgcgttgcgctcactg cccgctttccagtcgggaaacctgtcgtgccagctgcattaatgaatcggccaacgcgcggggagaggcggtttgcg tattgggcgccagggtggtttttcttttcaccagtgagacgggcaacagctgattgcccttcaccgcctggccctga gagagttgcagcaagcggtccacgctggtttgccccagcaggcgaaaatcctgtttgatggtggttgacggcgggat ataacatgagctgtcttcggtatcgtcgtatcccactaccgagatatccgcaccaacgcgcagcccggactcggtaa tggcgcgcattgcgcccagcgccatctgatcgttggcaaccagcatcgcagtgggaacgatgccctcattcagcatt tgcatggtttgttgaaaaccggacatggcactccagtcgccttcccgttccgctatcggctgaatttgattgcgagt gagatatttatgccagccagccagacgcagacgcgccgagacagaacttaatgggcccgctaacagcgcgatttgct ggtgacccaatgcgaccagatgctccacgcccagtcgcgtaccgtcttcatgggagaaaataatactgttgatgggt gtctggtcagagacatcaagaaataacgccggaacattagtgcaggcagcttccacagcaatggcatcctggtcatc cagcggatagttaatgatcagcccactgacgcgttgcgcgagaagattgtgcaccgccgctttacaggcttcgacgc cgcttcgttctaccatcgacaccaccacgctggcacccagttgatcggcgcgagatttaatcgccgcgacaatttgc gacggcgcgtgcagggccagactggaggtggcaacgccaatcagcaacgactgtttgcccgccagttgttgtgccac gcggttgggaatgtaattcagctccgccatcgccgcttccactttttcccgcgttttcgcagaaacgtggctggcct ggttcaccacgcgggaaacggtctgataagagacaccggcatactctgcgacatcgtataacgttactggtttcatc aaaatcgtctccctccgtttgaatatttgattgatcgtaaccagatgaagcactctttccactatccctacagtgtt atggcttgaacaatcacgaaacaataattggtacgtacgatctttcagccgactcaaacatcaaatcttacaaatgt agtctttgaaagtattacatatgtaagatttaaatgcaaccgttttttcggaaggaaatgatgacctcgtttccacc ggaattagcttgcatgcctaatcgccatcttccagcaggcgcaccattgcccctgtttcactatccaggttacggat atagttcatgacaatatttacattggtccagccaccagcttgcatgatctccggtattgaaactccagcgcgggcca tatctcgcgcggctccgacacgggcactgtgtccagaccaggccaggtatctctgaccagagtcatccttagcgccg taaatcaatcgatgagttgcttcaaaaatcccttccagggcgcgagttgatagctggctggtggcagatggcgcggc aacaccattttttctgacccggcaaaacaggtagttattcggatcatcagctacaccagagacggaaatccatcgct cgaccagtttagttacccccaggctaagtgccttctctacacctgcggtgctaaccagcgttttcgttctgccaata tggattaacattctcccaccgtcagtacgtgagatatctttaaccctgatcctggcaatttcggctatacgtaacag ggtgttataagcaatccccagaaatgccagattacgtatatcctggcagcgatcgctattttccatgagtgaacgaa cctggtcgaaatcagtgcgttcgaacgctagagcctgttttgcacgttcaccggcatcaacgttttcttttcggatc cgccgcataaccagtgaaacagcattgctgtcacttggtcgtggcagcccggaccgacgatgaagcatgtttagctg gcccaaatgttgctggatagtttttactgccagaccgcgcgcctgaagatatagaagataatcgcgaacatcttcag gttctgcgggaaaccatttccggttattcaacttgcaccatgccgcccacgaccggcaaacggacagaagcattttc caggtatgctcagaaaacgcctggcgatccctgaacatgtccatcaggttcttgcgaacctcatcactcgttgcatc gaccggtaatgcaggcaaattttggtgtacggtcagtaaattggacatacctgcttcctccttaagcttaattgtta tccgctcacaattccacacattatgccacaccttgtagataaagtcaacaactttttgcaaaatttttcaggaattt tagcagaggttgttctggatgtagaacaaaacatctttccgctcttgtgctgttaggatatctttcttggaagctag gtaggcaagggctacctcaaataaatcttcttcagggtgcgctatttttaaggtgcctagtgaggtcttgaccactt cacccataatttcagtgccgaatagtctggactgggctgtgtactgcagtgaagcttcagggcccgatcgatgccgc cgcttaattaattaatccagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgt tgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagtgtcattttatttcccccgtttc agcatcaagaacctttgcataacttgctctatatccacactgataattgccctcaaaccataatctaaaggcgctag agtttgttgaaacaatatcttttacatcattcgtatttaaaattccaaactccgctcccctaaggcgaataaaagcc attaaatcttttgtatttaccaaattatagtcatccactatatctaagagtaaattcttcaattctcttttttggct ttcatcaagtgttatatagcggtcaatatcaaaatcattaatgttcaaaatatcttttttgtcgtatatatgtttat tcttagcaatagcgtcctttgattcatgagtcaaatattcataagaacctttgatataatcaagtatctcaacatga gcaactgaactattccccaattttcgcttaatcttgttcctaacgctttctattgttacaggatttcgtgcaatata tataacgtgatagtgtggttttttatagtgctttccatttcgtataacatcactactattccatgtatctttatctt ttttttcgtccatatcgtgtaaaggactgacagccatagatacgcccaaactctctaatttttccttccaatcatta ggaattgagtcaggatataataaaaatccaaaatttctagctttagtatttttaatagccatgatataattacctta tcaaaaacaagtagcgaaaactcgtatccttctaaaaacgcgagctttcgcttattttttttgttctgattcctttc ttgcatattcttctatagctaacgccgcaaccgcagattttgaaaaacctttttgtttcgccatatctgttaatttt ttatcttgctcttttgtcagagaaatcataactctttttttcgattctgaaatcaccatttaaaaaactccaatcaa ataattttataaagttagtgtatcactttgtaatcataaaaacaacaataaagctacttaaatatagatttataaaa aacgttggcgaaaacgttggcgattcgttggcgattgaaaaaccccttaaacccttgagccagttgggatagagcgt ttttggcacaaaaattggcactcggcacttaatggggggtcgtagtacggaagcaaaattcgcttcctttcccccca tttttttccaaattccaaatttttttcaaaaattttccagcgctaccgctcggcaaaattgcaagcaatttttaaaa tcaaacccatgagggaatttcattccctcatactcccttgagcctcctccaaccgaaatagaagggcgctgcgctta ttatttcattcagtcatcggctttcataatctaacagacaacatcttcgctgcaaagccacgctacgctcaagggct tttacgctacgataacgcctgttttaacgattatgccgataactaaacgaaataaacgctaaaacgtctcagaaacg attttgagacgttttaataaaaaatcgcctagtgcttggattctcaccaataaaaaacgcccggcggcaaccgagcg ttctgaacaaatccagatggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcggtactaaa acaattcatccagtaaaatataatattttattttctcccaatcaggcttgatccccagtaagtcaaaaaatagctcg acatactgttcttccccgatatcctccctgatcgaccggacgcagaaggcaatgtcataccacttgtccgccctgcc gcttctcccaagatcaataaagccacttactttgccatctttcacaaagatgttgctgtctcccaggtcgccgtggg aaaagacaagttcctcttcgggcttttccgtctttaaaaaatcatacagctcgcgcggatctttaaatggagtgtct tcttcccagttttcgcaatccacatcggccagatcgttattcagtaagtaatccaattcggctaagcggccgtctaa gctattcgtatagggacaatccgatatgtcgatggagtgaaagagcctgatgcactccgcatacagctcgatagtct tttcagggctttgttcatcttcatacccttccgagcaaaggacgccatcggcctcactcatgagcagattgctccag ccatcatgccgttcaaagtgcaggacctttggaacaggcagctttccttccagccatagcatcatgtccttttcccg ttccacatcataggtggtccctttataccggctgtccgtcatttttaaatataggatttcattttctcccaccagct tatataccttagcaggagacattccttccgtatcttttacgcagcggtattcttcgatcagttttttcaattccggt gatattctcattttagccatttattatttccttcctcttttctacagtatttaaagataccccaagaagctaattat aacaagacgaactccaattcactgttccttgcattctaaaaccttaaatacagaaaacagccttttcaaagttgttt tcaaagttggcgtataacatagtatcgacggagccgattttgaaaccacaattatgatagaattt 5528

Claims (7)

1. it is a kind of transform bacillus gene group method, it is characterised in that:Comprise the following steps:
(1) EcoR I and the Apa I site in pBAV1K-T5-GFP plasmids insert MCS fragment, and by synonymous Mutation, deletes NdeI restriction enzyme sites therein, obtains plasmid pBTS;
(2) restriction enzyme site in the left end of MCS inserts the homologous recombination fragment A of 500-800bp, right side restriction enzyme site The homologous recombination fragment B of 500-800bp is inserted, middle insertion mutation fragment, purpose fragment or any fragment is not inserted into, both two The fragment of transformation is needed between homologous recombination region, plasmid pBTS-X is obtained;
(3) pBTS-X is transferred in bacillus by electricity conversion, obtains positive transformants bacterial strain;
(4) into being cultivated in fluid nutrient medium, cultivation temperature is 45 DEG C to the positive transformants bacterium colony in picking (3), during culture Between be more than 24h;
(5) bacterium solution 100ul -500ul in step (4) is taken, is applied on the LB flat boards containing 30mg/L kanamycins, cultivation temperature It is 45 DEG C, carries out incubated overnight;
(6) bacterium colony in picking step (5) is into being cultivated in fluid nutrient medium, every 8-16h passages once, until screening To nonreactive bacterial strain;
(7) take the bacterium solution in step (6) and be diluted coated plate, dilution 105-106Times, incubated overnight;
(8) bacterium colony in picking step (7) carries out Resistance Identification, until obtaining 5-10 plants of nonreactive bacterial strain;
(9) nonreactive bacterial strain is inoculated into fluid nutrient medium, incubated overnight, extracts bacterial genomes, enter performing PCR identification;It is positive Bacterial strain proceeds sequencing identification, and sequencing identification result obtains final product Bacillus strain for positive strain.
2. it is according to claim 1 it is a kind of transform bacillus gene group method, it is characterised in that:The step (3) Middle bacillus is bacillus subtilis 168, Z12 bacterial strains, bacillus amyloliquefaciens, bacillus pumilus, bacillus licheniformis Or other pBTS plasmids have the gram-positive bacteria of temperature sensitive copy characteristic.
3. it is according to claim 2 it is a kind of transform bacillus gene group method, it is characterised in that:The gram sun Property bacterium be streptococcus pneumonia, Lactococcus lactis or series bacillus bacterial strain.
4. it is according to claim 1 it is a kind of transform bacillus gene group method, it is characterised in that:The pBTS nucleosides Acid sequence is as shown in SEQ ID NO.1.
5. it is according to claim 1 it is a kind of transform bacillus gene group method, it is characterised in that:Including following step Suddenly:(1) the MCS left-hand end in pBTS inserts the homologous recombination fragment A of 400-800bp, right-hand end insertion 400- The homologous recombination fragment B of 800bp, middle insertion mutation fragment or purpose fragment or is not inserted into fragment, then in the transformation of B with centre Insertion has H chloramphenicol resistance fragments between fragment or A and the transformation fragment of centre, and cre weights are contained at H chloramphenicol resistance fragments two ends Lox71 the and lox72 fragments of group enzyme identification, the plasmid is named as pBTS-X-Z;
(2) pBTS-X-Z plasmids are converted by electricity conversion and is entered in bacillus, obtain positive transformants bacterial strain;
(3) into being cultivated in fluid nutrient medium, cultivation temperature is 45 DEG C to the positive transformants bacterium colony in picking step (2), training The time of supporting is more than 24h;
(4) bacterium solution 100ul -500ul in (3) is taken in step, is applied on the flat board containing kanamycins or H mycins, culture temperature 45 DEG C of degree, incubated overnight;
(5) bacterium colony in picking (4) enters and is cultivated in the LB liquid medium containing H chloramphenicol resistances, every 8-16h passages Once, only there is the bacterium colony of H chloramphenicol resistances until screening;
(6) take the bacterium solution in (5) and be diluted coated plate, flat board contains H chloramphenicol resistances, dilution 105-106Times, incubated overnight;
(7) bacterium colony in picking (6) carries out Resistance Identification, only has H chloramphenicol resistances until obtaining 5-10 plants, and without card, that is mould The bacterial strain of plain resistance;
(8) monoclonal antibody inoculation is taken in fluid nutrient medium, incubated overnight extracts bacterial genomes, enter performing PCR identification, it is positive Bacterial strain proceeds sequencing identification, and sequencing identification is that positive bacterial strain enters next step;
(9) conversion pBTS-IC plasmids enter the monoclonal antibody bacterial strain that the positive is accredited as in (8), and IC is the regulation and control cre restructuring of lactose operator The fragment of expression of enzymes, cre recombinases can characteristic identification lox71 and lox66 sites, recombinated, being left in genome can not The loxP sites recognized by cre recombinases, the lower fragment of cutting contains the lox72 sites for easily recognizing;
(10) the positive transformants bacterial strain in picking (9), connects bacterium and is cultivated, using IPTG induced expressions or leakage expression Cre recombinates cleavage H chloramphenicol resistance fragments;
(11) bacterium solution in (10) is taken, is inoculated into fluid nutrient medium, cultivation temperature is 45 DEG C, and incubation time is more than 24h;
(12) bacterium solution of culture in (11), dilution 10 are taken5-106To on the flat board of nonreactive, cultivation temperature is 45 DEG C to coated plate, is overnight trained Support;
(13) single bacterium colony in (12) is taken, Resistance Identification is carried out, until screens 2-5 plants of nonreactive bacterial strain;
(14) nonreactive bacterial strain in (13) is taken, is inoculated into culture medium, incubated overnight extracts genome, enter performing PCR identification, sun Property bacterial strain carry out sequencing identification again, be still accredited as the positive bacterial strain be complete genome manipulation bacterial strain.
6. it is according to claim 5 it is a kind of transform bacillus gene group method, it is characterised in that:The H mycins are Any in bleomycin, tetracycline, chloramphenicol and spectinomycin.
7. it is according to claim 1 it is a kind of transform bacillus gene group method, it is characterised in that:The pBTS-IC Nucleotide sequence is as shown in SEQ ID NO.3.
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CN107779465A (en) * 2017-10-30 2018-03-09 成都美溢德生物技术有限公司 A kind of method for reducing fermentation of bacillus liquid viscosity
CN109337855A (en) * 2018-11-20 2019-02-15 成都美溢德生物技术有限公司 A kind of efficient method for reducing fermentation of bacillus liquid viscosity
CN112239742A (en) * 2020-08-24 2021-01-19 天津科技大学 Bacillus licheniformis for producing alkaline protease and application thereof

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